Knowledge (XXG)

Michael Waterman

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published a landmark paper describing a mathematical model for fingerprint mapping. This work formed one of the theoretical cornerstones for many of the later DNA mapping and sequencing projects, especially the
1796: 1806: 1801: 1766: 999: 578: 503: 1751: 1746: 411: 1761: 1776: 1771: 122: 986: 1811: 953: 476: 1756: 1741: 318:, where he holds an Endowed Associates Chair in Biological Sciences, Mathematics and Computer Science. He previously held positions at 720: 964: 315: 204: 872: 416: 1816: 1237: 480: 461: 319: 209: 1288: 631: 545:"Michael S. Waterman: Professor of Biological Sciences, Mathematics, Computer Science, University of Southern California" 776: 488: 1548: 1461: 507: 484: 1710: 522:, of a childhood spent on an isolated livestock ranch on the southern coast of Oregon in the mid-twentieth century. 1685: 1604: 1471: 661: 492: 355: 75: 1660: 979: 1523: 1405: 1078: 570: 375: 89: 864: 544: 1624: 469: 407: 339: 71: 1705: 1731: 1466: 1140: 881: 785: 323: 214: 199: 1695: 370:. He focuses on applying mathematics, statistics, and computer science techniques to various problems in 972: 749: 367: 158: 116: 94: 1614: 1736: 1594: 1390: 1273: 670: 392: 178: 600: 1644: 1609: 1599: 1573: 1268: 886: 790: 453: 1639: 1369: 374:. His work has contributed to some of the most widely used tools in the field. In particular, the 1563: 1543: 1538: 1502: 1497: 1278: 465: 457: 449: 396: 383: 99: 1558: 1518: 1441: 1314: 1165: 1119: 1104: 949: 907: 899: 845: 803: 741: 716: 371: 1675: 1634: 1436: 1415: 1339: 1150: 1088: 891: 837: 795: 688: 678: 403: 311: 242: 173: 59: 1670: 1528: 1359: 1354: 1309: 1283: 1206: 1191: 1186: 1068: 1037: 441: 379: 134: 1114: 674: 1446: 1364: 1324: 1242: 1160: 1042: 1017: 693: 656: 445: 437: 335: 1725: 1690: 1629: 1492: 1456: 1395: 1349: 1334: 1293: 1263: 1258: 1201: 1196: 1135: 1109: 1032: 841: 799: 433: 255: 183: 828:(1988). "Genomic mapping by fingerprinting random clones: A mathematical analysis". 1700: 1568: 1553: 1533: 1487: 1420: 1410: 1400: 1385: 1319: 1232: 1222: 1181: 1145: 1073: 1022: 260: 683: 1680: 1451: 1329: 1227: 1083: 1063: 1027: 995: 821: 753: 499: 387: 351: 307: 163: 128: 230: 30: 1589: 1344: 1155: 347: 168: 903: 1665: 745: 627: 299: 895: 601:"Knowledge (XXG) co-founder Jimmy Wales among 2015 Dan David Prize winners" 911: 849: 807: 1619: 303: 399:
assembly which is widely used in next-generation sequencing projects.
552: 420:. Waterman also authored one of the earliest textbooks in the field: 276: 224: 582: 366:
Waterman is one of the founders and current leaders in the area of
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Introduction to computational biology: maps, sequences and genomes
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Fellows of the International Society for Computational Biology
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Fellows of the Society for Industrial and Applied Mathematics
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Members of the United States National Academy of Engineering
774:(1981). "Identification of common molecular subsequences". 1797:
Members of the United States National Academy of Sciences
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Some Ergodic Properties of Multi-Dimensional F-Expansions
395:. A 1995 paper by Idury and Waterman introduced Eulerian- 231:
Some Ergodic Properties of Multi-Dimensional F-Expansions
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American Men and Women of Science, Thomson Gale 2005
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Research in Computational Molecular Biology (RECOMB)
1653: 1582: 1511: 1480: 1429: 1378: 1302: 1251: 1215: 1174: 1128: 1097: 1056: 1010: 410:in his lab), he began the international conference 271: 251: 241: 223: 192: 151: 109: 82: 67: 40: 21: 1807:Foreign members of the Chinese Academy of Sciences 594: 592: 1000:International Society for Computational Biology 863:Idury, Ramana M.; Waterman, Michael S. (1995). 715:. CreateSpace Independent Publishing Platform. 579:International Society for Computational Biology 504:International Society for Computational Biology 491:since 2001. He has been an academician of the 944:Waterman, Michael R.; Waterman, M. S. (1995). 980: 8: 865:"A New Algorithm for DNA Sequence Assembly" 987: 973: 965: 623: 621: 18: 1802:Members of the French Academy of Sciences 1767:University of Southern California faculty 885: 789: 740:(PhD thesis). Michigan State University. 706: 704: 692: 682: 564: 562: 713:Getting Outside: A Far-Western Childhood 650: 648: 530: 316:University of Southern California (USC) 123:Gairdner Foundation International Award 444:for his contributions to the field of 538: 536: 534: 477:American Academy of Arts and Sciences 475:Waterman has been a member of the US 422:Introduction to Computational Biology 414:, and he is a founding editor of the 7: 1752:21st-century American mathematicians 1747:20th-century American mathematicians 487:since 2013, and a member of the US 14: 205:University of Southern California 1762:21st-century American biologists 873:Journal of Computational Biology 736:Waterman, Michael Smith (1969). 518:Waterman has written a memoir, 440:, Waterman was awarded the 2015 417:Journal of Computational Biology 386:programs. In 1988, Waterman and 29: 481:National Academy of Engineering 479:since 1995, a member of the US 1777:Oregon State University alumni 1772:Idaho State University faculty 948:. London: Chapman & Hall. 927:"The RECOMB conference series" 462:University of Southern Denmark 320:Los Alamos National Laboratory 210:Los Alamos National Laboratory 1: 632:Mathematics Genealogy Project 483:since 2012, a member of the 1812:People from Coquille, Oregon 842:10.1016/0888-7543(88)90007-9 800:10.1016/0022-2836(81)90087-5 777:Journal of Molecular Biology 684:10.1371/journal.pcbi.0020105 489:National Academy of Sciences 508:ISCB Senior Scientist Award 485:Chinese Academy of Sciences 1833: 1757:American bioinformaticians 1742:People from Bandon, Oregon 711:Waterman, Michael (2016). 662:PLOS Computational Biology 493:French Academy of Sciences 298:(born June 28, 1942) is a 549:dornsife.usc.edu/labs/msw 356:Michigan State University 267: 144: 76:Michigan State University 28: 498:Waterman was elected an 382:) is the basis for many 376:Smith-Waterman algorithm 330:Education and early life 296:Michael Spencer Waterman 90:Smith-Waterman algorithm 45:Michael Spencer Waterman 35:Michael Waterman in 2004 759:(subscription required) 470:Oregon State University 408:postdoctoral researcher 340:Oregon State University 95:Lander-Waterman formula 72:Oregon State University 1817:American statisticians 896:10.1089/cmb.1995.2.291 506:and was awarded their 334:Waterman grew up near 324:Idaho State University 215:Idaho State University 200:University of Virginia 16:American mathematician 368:computational biology 159:Computational biology 117:Guggenheim Fellowship 448:. He was awarded an 393:Human Genome Project 179:Discrete mathematics 1645:Gustavo Stolovitzky 1269:Julio Collado-Vides 675:2006PLSCB...2..105M 655:Maisel, M. (2006). 454:Tel Aviv University 362:Research and career 1711:Reinhard Schneider 1503:Marie-France Sagot 1498:Xiaole Shirley Liu 466:Honorary Doctorate 458:Honorary Doctorate 450:Honorary Doctorate 397:De Bruijn sequence 384:sequence alignment 247:John Rankin Kinney 100:De Bruijn sequence 1719: 1718: 1625:Núria López Bigas 1559:Katherine Pollard 1519:Serafim Batzoglou 1442:Terry Gaasterland 1166:Gunnar von Heijne 1105:Michael Ashburner 955:978-0-412-99391-6 428:Awards and honors 372:molecular biology 293: 292: 146:Scientific career 1824: 1676:Takashi Gojobori 1635:Teresa Przytycka 1615:Christina Leslie 1437:Patricia Babbitt 1416:Olga Troyanskaya 1340:Christine Orengo 1238:Robert Gentleman 1089:Alfonso Valencia 1048:Michael Waterman 1004:year of election 989: 982: 975: 966: 960: 959: 941: 935: 934: 922: 916: 915: 889: 869: 860: 854: 853: 818: 812: 811: 793: 767: 761: 760: 757: 733: 727: 726: 708: 699: 698: 696: 686: 652: 643: 640: 634: 628:Michael Waterman 625: 616: 615: 613: 611: 596: 587: 586: 581:. Archived from 566: 557: 556: 551:. Archived from 540: 464:in 2013, and an 404:Pavel A. Pevzner 378:(developed with 342:, followed by a 312:Computer Science 289: 286: 284: 282: 280: 278: 252:Notable students 243:Doctoral advisor 237: 174:Computer science 60:Coquille, Oregon 55: 53: 33: 23:Michael Waterman 19: 1832: 1831: 1827: 1826: 1825: 1823: 1822: 1821: 1722: 1721: 1720: 1715: 1671:Mikhail Gelfand 1649: 1595:A. Keith Dunker 1578: 1549:Rafael Irizarry 1529:Mark Borodovsky 1507: 1476: 1462:William Pearson 1425: 1391:Andrea Califano 1374: 1360:Anna Tramontano 1355:Sarah Teichmann 1310:Helen M. Berman 1298: 1284:Thomas Lengauer 1247: 1211: 1207:Steven Salzberg 1192:Minoru Kanehisa 1187:David Eisenberg 1170: 1124: 1093: 1069:Lawrence Hunter 1052: 1006: 993: 963: 956: 943: 942: 938: 924: 923: 919: 867: 862: 861: 857: 826:Waterman, M. S. 820: 819: 815: 772:Waterman, M. 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Smith 364: 332: 275: 259: 235: 219: 188: 140: 135:Dan David Prize 105: 74: 68:Alma mater 63: 57: 51: 49: 47: 46: 36: 24: 17: 12: 11: 5: 1830: 1828: 1820: 1819: 1814: 1809: 1804: 1799: 1794: 1789: 1784: 1779: 1774: 1769: 1764: 1759: 1754: 1749: 1744: 1739: 1734: 1724: 1723: 1717: 1716: 1714: 1713: 1708: 1703: 1698: 1693: 1688: 1683: 1678: 1673: 1668: 1663: 1661:Barbara Bryant 1657: 1655: 1651: 1650: 1648: 1647: 1642: 1637: 1632: 1627: 1622: 1617: 1612: 1607: 1605:Wolfgang Huber 1602: 1597: 1592: 1586: 1584: 1580: 1579: 1577: 1576: 1571: 1566: 1561: 1556: 1551: 1546: 1541: 1536: 1531: 1526: 1521: 1515: 1513: 1509: 1508: 1506: 1505: 1500: 1495: 1490: 1484: 1482: 1478: 1477: 1475: 1474: 1469: 1464: 1459: 1454: 1449: 1447:Hanah Margalit 1444: 1439: 1433: 1431: 1427: 1426: 1424: 1423: 1418: 1413: 1408: 1403: 1398: 1393: 1388: 1382: 1380: 1376: 1375: 1373: 1372: 1367: 1365:Shoshana Wodak 1362: 1357: 1352: 1347: 1342: 1337: 1332: 1327: 1322: 1317: 1315:Steven Brenner 1312: 1306: 1304: 1300: 1299: 1297: 1296: 1291: 1289:Michael Levitt 1286: 1281: 1276: 1271: 1266: 1261: 1255: 1253: 1249: 1248: 1246: 1245: 1240: 1235: 1230: 1225: 1219: 1217: 1213: 1212: 1210: 1209: 1204: 1199: 1194: 1189: 1184: 1178: 1176: 1172: 1171: 1169: 1168: 1163: 1161:Martin Vingron 1158: 1153: 1148: 1143: 1138: 1132: 1130: 1126: 1125: 1123: 1122: 1120:Richard Durbin 1117: 1112: 1107: 1101: 1099: 1095: 1094: 1092: 1091: 1086: 1081: 1076: 1071: 1066: 1060: 1058: 1054: 1053: 1051: 1050: 1045: 1043:Janet Thornton 1040: 1035: 1030: 1025: 1020: 1018:David Haussler 1014: 1012: 1008: 1007: 994: 992: 991: 984: 977: 969: 962: 961: 954: 936: 917: 887:10.1.1.79.6459 880:(2): 291–306. 855: 836:(3): 231–239. 813: 791:10.1.1.63.2897 784:(1): 195–197. 762: 728: 722:978-1530929344 721: 700: 644: 635: 617: 605:eurekalert.org 588: 585:on 2017-03-20. 571:"ISCB Fellows" 558: 555:on 2017-02-02. 529: 527: 524: 515: 512: 446:bioinformatics 438:David Haussler 429: 426: 363: 360: 336:Bandon, Oregon 331: 328: 291: 290: 273: 269: 268: 265: 264: 253: 249: 248: 245: 239: 238: 227: 221: 220: 218: 217: 212: 207: 202: 196: 194: 190: 189: 187: 186: 181: 176: 171: 166: 161: 155: 153: 149: 148: 142: 141: 139: 138: 132: 126: 120: 113: 111: 107: 106: 104: 103: 97: 92: 86: 84: 83:Known for 80: 79: 69: 65: 64: 58: 44: 42: 38: 37: 34: 26: 25: 22: 15: 13: 10: 9: 6: 4: 3: 2: 1829: 1818: 1815: 1813: 1810: 1808: 1805: 1803: 1800: 1798: 1795: 1793: 1790: 1788: 1785: 1783: 1780: 1778: 1775: 1773: 1770: 1768: 1765: 1763: 1760: 1758: 1755: 1753: 1750: 1748: 1745: 1743: 1740: 1738: 1735: 1733: 1732:Living people 1730: 1729: 1727: 1712: 1709: 1707: 1704: 1702: 1699: 1697: 1694: 1692: 1691:Fran Lewitter 1689: 1687: 1684: 1682: 1679: 1677: 1674: 1672: 1669: 1667: 1664: 1662: 1659: 1658: 1656: 1652: 1646: 1643: 1641: 1638: 1636: 1633: 1631: 1628: 1626: 1623: 1621: 1618: 1616: 1613: 1611: 1610:Sorin Istrail 1608: 1606: 1603: 1601: 1600:Eran Halperin 1598: 1596: 1593: 1591: 1588: 1587: 1585: 1581: 1575: 1574:Xuegong Zhang 1572: 1570: 1567: 1565: 1562: 1560: 1557: 1555: 1552: 1550: 1547: 1545: 1542: 1540: 1537: 1535: 1532: 1530: 1527: 1525: 1522: 1520: 1517: 1516: 1514: 1510: 1504: 1501: 1499: 1496: 1494: 1493:Eleazar Eskin 1491: 1489: 1486: 1485: 1483: 1479: 1473: 1470: 1468: 1465: 1463: 1460: 1458: 1457:Bernard Moret 1455: 1453: 1450: 1448: 1445: 1443: 1440: 1438: 1435: 1434: 1432: 1428: 1422: 1419: 1417: 1414: 1412: 1409: 1407: 1406:William Noble 1404: 1402: 1399: 1397: 1396:Daphne Koller 1394: 1392: 1389: 1387: 1384: 1383: 1381: 1377: 1371: 1368: 1366: 1363: 1361: 1358: 1356: 1353: 1351: 1350:Lincoln Stein 1348: 1346: 1343: 1341: 1338: 1336: 1335:Michal Linial 1333: 1331: 1328: 1326: 1323: 1321: 1318: 1316: 1313: 1311: 1308: 1307: 1305: 1301: 1295: 1294:Burkhard Rost 1292: 1290: 1287: 1285: 1282: 1280: 1277: 1275: 1274:Mark Gerstein 1272: 1270: 1267: 1265: 1264:Cyrus Chothia 1262: 1260: 1259:Rolf Apweiler 1257: 1256: 1254: 1250: 1244: 1241: 1239: 1236: 1234: 1231: 1229: 1226: 1224: 1221: 1220: 1218: 1214: 1208: 1205: 1203: 1202:Ruth Nussinov 1200: 1198: 1197:Satoru Miyano 1195: 1193: 1190: 1188: 1185: 1183: 1180: 1179: 1177: 1173: 1167: 1164: 1162: 1159: 1157: 1154: 1152: 1151:Pavel Pevzner 1149: 1147: 1144: 1142: 1139: 1137: 1136:Bonnie Berger 1134: 1133: 1131: 1127: 1121: 1118: 1116: 1113: 1111: 1108: 1106: 1103: 1102: 1100: 1096: 1090: 1087: 1085: 1082: 1080: 1077: 1075: 1072: 1070: 1067: 1065: 1062: 1061: 1059: 1055: 1049: 1046: 1044: 1041: 1039: 1036: 1034: 1033:David Sankoff 1031: 1029: 1026: 1024: 1021: 1019: 1016: 1015: 1013: 1009: 1005: 1001: 997: 990: 985: 983: 978: 976: 971: 970: 967: 957: 951: 947: 940: 937: 932: 928: 925:Anon (2017). 921: 918: 913: 909: 905: 901: 897: 893: 888: 883: 879: 875: 874: 866: 859: 856: 851: 847: 843: 839: 835: 831: 827: 823: 822:Lander, E. S. 817: 814: 809: 805: 801: 797: 792: 787: 783: 779: 778: 773: 766: 763: 755: 751: 747: 743: 739: 732: 729: 724: 718: 714: 707: 705: 701: 695: 690: 685: 680: 676: 672: 668: 664: 663: 658: 651: 649: 645: 639: 636: 633: 629: 624: 622: 618: 606: 602: 599:Anon (2015). 595: 593: 589: 584: 580: 576: 572: 569:Anon (2017). 565: 563: 559: 554: 550: 546: 543:Anon (2017). 539: 537: 535: 531: 525: 523: 521: 514:Personal life 513: 511: 509: 505: 501: 496: 494: 490: 486: 482: 478: 473: 471: 467: 463: 459: 456:in 2011, an 455: 451: 447: 443: 439: 435: 434:Cyrus Chothia 427: 425: 423: 419: 418: 413: 409: 405: 400: 398: 394: 389: 385: 381: 377: 373: 369: 361: 359: 357: 353: 349: 345: 341: 337: 329: 327: 325: 321: 317: 313: 309: 305: 301: 297: 288: 274: 270: 266: 262: 257: 256:Pavel Pevzner 254: 250: 246: 244: 240: 233: 232: 228: 226: 222: 216: 213: 211: 208: 206: 203: 201: 198: 197: 195: 191: 185: 184:Combinatorics 182: 180: 177: 175: 172: 170: 167: 165: 162: 160: 157: 156: 154: 150: 147: 143: 136: 133: 130: 127: 124: 121: 118: 115: 114: 112: 108: 101: 98: 96: 93: 91: 88: 87: 85: 81: 77: 73: 70: 66: 61: 56:(age 82) 48:June 28, 1942 43: 39: 32: 27: 20: 1701:Debora Marks 1640:Eytan Ruppin 1569:Zhiping Weng 1554:Laxmi Parida 1534:Rita Casadio 1524:Judith Blake 1488:Vineet Bafna 1421:Tandy Warnow 1411:Lior Pachter 1401:Anders Krogh 1386:Alex Bateman 1370:Haim Wolfson 1320:Dan Gusfield 1233:Nir Friedman 1223:Amos Bairoch 1182:Pierre Baldi 1146:Jill Mesirov 1115:Søren Brunak 1079:Chris Sander 1074:Eugene Myers 1047: 1038:Temple Smith 1023:David Lipman 945: 939: 930: 920: 877: 871: 858: 833: 829: 825: 816: 781: 775: 771: 765: 737: 731: 712: 666: 660: 638: 608:. Retrieved 604: 583:the original 574: 553:the original 548: 519: 517: 497: 495:since 2005. 474: 431: 421: 415: 401: 365: 333: 295: 294: 261:Tandy Warnow 229: 193:Institutions 145: 1737:1942 births 1686:David Jones 1681:Trey Ideker 1564:Ben Raphael 1544:Osamu Gotoh 1539:Paul Flicek 1452:Yves Moreau 1330:Janet Kelso 1325:Barry Honig 1279:Des Higgins 1243:Andrej Šali 1228:Ewan Birney 1110:Phil Bourne 1084:Gary Stormo 1064:Russ Altman 1028:Webb Miller 770:Smith, T.; 669:(8): e105. 610:13 February 500:ISCB Fellow 388:Eric Lander 352:probability 308:Mathematics 164:Probability 129:ISCB Fellow 1726:Categories 1630:Dana Pe'er 1590:Atul Butte 1472:Mike Steel 1467:Mona Singh 1345:Aviv Regev 1156:Ron Shamir 1141:Peter Karp 931:recomb.org 526:References 472:in 2024. 406:(a former 348:statistics 169:Statistics 52:1942-06-28 1706:Mihai Pop 1666:Sean Eddy 904:1066-5277 882:CiteSeerX 786:CiteSeerX 754:302449931 510:in 2009. 460:from the 358:in 1969. 300:Professor 263:(postdoc) 258:(postdoc) 830:Genomics 750:ProQuest 746:25799203 575:iscb.org 277:dornsife 102:assembly 1696:Jun Liu 1620:Ming Li 998:of the 996:Fellows 912:7497130 850:3294162 808:7265238 694:1526462 671:Bibcode 630:at the 314:at the 304:Biology 272:Website 50: ( 952:  910:  902:  884:  848:  806:  788:  752:  744:  719:  691:  236:(1969) 234:  225:Thesis 152:Fields 137:(2015) 131:(2009) 125:(2002) 119:(1995) 110:Awards 868:(PDF) 468:from 452:from 432:With 402:With 354:from 283:/labs 78:(PhD) 1654:2022 1583:2021 1512:2020 1481:2019 1430:2018 1379:2017 1303:2016 1252:2015 1216:2014 1175:2013 1129:2012 1098:2011 1057:2010 1011:2009 950:ISBN 908:PMID 900:ISSN 846:PMID 804:PMID 742:OCLC 717:ISBN 612:2015 436:and 350:and 322:and 310:and 285:/msw 281:.edu 279:.usc 62:, US 41:Born 1002:by 892:doi 838:doi 796:doi 782:147 689:PMC 679:doi 346:in 344:PhD 302:of 1728:: 929:. 906:. 898:. 890:. 876:. 870:. 844:. 832:. 824:; 802:. 794:. 780:. 748:. 703:^ 687:. 677:. 665:. 659:. 647:^ 620:^ 603:. 591:^ 577:. 573:. 561:^ 547:. 533:^ 424:. 326:. 306:, 988:e 981:t 974:v 958:. 933:. 914:. 894:: 878:2 852:. 840:: 834:2 810:. 798:: 756:. 725:. 697:. 681:: 673:: 667:2 614:. 287:/ 54:)

Index


Coquille, Oregon
Oregon State University
Michigan State University
Smith-Waterman algorithm
Lander-Waterman formula
De Bruijn sequence
Guggenheim Fellowship
Gairdner Foundation International Award
ISCB Fellow
Dan David Prize
Computational biology
Probability
Statistics
Computer science
Discrete mathematics
Combinatorics
University of Virginia
University of Southern California
Los Alamos National Laboratory
Idaho State University
Thesis
Some Ergodic Properties of Multi-Dimensional F-Expansions
Doctoral advisor
Pavel Pevzner
Tandy Warnow
dornsife.usc.edu/labs/msw/
Professor
Biology
Mathematics

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