Knowledge (XXG)

Nextstrain

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702: 27: 717: 565:; Zuber, Moira; Nadeau, Sarah; Comas, Iñaki; González Candelas, Fernando; Stadler, Tanja; Neher, Richard A. (28 October 2020). "Emergence and spread of a SARS-CoV-2 variant through Europe in the summer of 2020". 389: 356: 773: 540: 381: 348: 668: 442:
Hadfield, James; Megill, Colin; Bell, Sidney; Huddleston, John; Potter, Barney; Callender, Charlton; et al. (2018-05-22). Kelso, Janet (ed.).
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According to their website, the Nextstrain team maintains an up-to-date genomic analysis of each of the following pathogens:
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Its aim is to support public health measures and surveillance by facilitating understanding of the spread and evolution of
197:. The Nextstrain platform was begun in 2015. Code developed by Nextstrain is made publicly available, via, for example 292: 747: 778: 448: 660: 740: 566: 509: 103: 586: 126: 98: 412: 26: 248: 571: 483: 465: 724: 473: 457: 258: 233: 223: 213: 701: 201:
and its data is available and viewable in accessible form via the pages at the website.
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This article about a medical organization or association is a
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Nextstrain and its results have been widely quoted during the
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tools for visualising the genetics behind the spread of
163: 728: 607:"Nextstrain, Sequencing & the SARS-CoV-2 Pandemic" 444:"Nextstrain: real-time tracking of pathogen evolution" 159: 140: 112: 86: 51: 33: 774:International medical and health organizations 748: 182:, Switzerland which provides a collection of 8: 587:"Swiss National COVID-19 Science Task Force" 303:Special Achievement Award for the web tool. 19: 347:Richards, Sarah Elizabeth (26 March 2020). 755: 741: 700: 174:is a collaboration between researchers in 25: 18: 570: 477: 413:"nextstrain RNA, DNA, and COVID-19]" 376: 374: 417:earlycareervoice.professional.heart.org 339: 297:Fred Hutchinson Cancer Research Center 543:from the original on 22 December 2020 512:from the original on 26 December 2020 392:from the original on 16 December 2020 359:from the original on 24 December 2020 7: 713: 711: 671:from the original on 10 October 2021 641:from the original on 20 October 2020 423:from the original on 25 January 2021 16:Website for tracking viral evolution 727:. You can help Knowledge (XXG) by 328:List of COVID-19 simulation models 14: 715: 411:Reza, Nosheen (6 April 2020). 1: 572:10.1101/2020.10.25.20219063v1 462:10.1093/bioinformatics/bty407 291:In May 2020, Nextstrain and 661:"Webby Special Achievement" 531:Drake, John (19 Dec 2020). 800: 784:Medical organization stubs 710: 353:www.nationalgeographic.com 264:West African Ebola 2013-16 39:; 9 years ago 24: 631:"40 Under 40 Healthcare" 665:winners.webbyawards.com 295:(Associate professor, 164:https://nextstrain.org 178:, United States and 104:Open-source software 388:. 29 October 2020. 99:Viral phylodynamics 21: 249:Seasonal influenza 147:Open Science Prize 736: 735: 563:Hodcroft, Emma B. 456:(23): 4121–4123. 275:Covid-19 pandemic 169: 168: 791: 779:Genome databases 757: 750: 743: 719: 712: 704: 699: 698: 696:Official website 681: 680: 678: 676: 657: 651: 650: 648: 646: 627: 621: 620: 618: 617: 611: 603: 597: 596: 594: 593: 583: 577: 576: 574: 559: 553: 552: 550: 548: 528: 522: 521: 519: 517: 498: 492: 491: 481: 439: 433: 432: 430: 428: 408: 402: 401: 399: 397: 378: 369: 368: 366: 364: 344: 79: 73: 66: 62: 47: 45: 40: 29: 22: 799: 798: 794: 793: 792: 790: 789: 788: 764: 763: 762: 761: 708: 694: 693: 690: 685: 684: 674: 672: 659: 658: 654: 644: 642: 629: 628: 624: 615: 613: 609: 605: 604: 600: 591: 589: 585: 584: 580: 561: 560: 556: 546: 544: 530: 529: 525: 515: 513: 500: 499: 495: 441: 440: 436: 426: 424: 410: 409: 405: 395: 393: 380: 379: 372: 362: 360: 346: 345: 341: 336: 309: 289: 277: 259:West Nile virus 234:Monkeypox virus 224:Enterovirus D68 214:Avian influenza 207: 188:viral outbreaks 155: 136: 115: 108: 82: 75: 69: 64: 58: 43: 41: 38: 17: 12: 11: 5: 797: 795: 787: 786: 781: 776: 766: 765: 760: 759: 752: 745: 737: 734: 733: 720: 706: 705: 689: 688:External links 686: 683: 682: 652: 622: 598: 578: 554: 537:www.forbes.com 523: 506:nextstrain.org 493: 449:Bioinformatics 434: 403: 370: 338: 337: 335: 332: 331: 330: 325: 320: 315: 308: 305: 293:Trevor Bedford 288: 285: 276: 273: 272: 271: 266: 261: 256: 251: 246: 241: 236: 231: 226: 221: 216: 206: 203: 167: 166: 161: 157: 156: 154: 153: 148: 144: 142: 138: 137: 135: 134: 129: 124: 122:Trevor Bedford 118: 116: 113: 110: 109: 107: 106: 101: 96: 94:Bioinformatics 90: 88: 84: 83: 81: 80: 67: 55: 53: 49: 48: 35: 31: 30: 15: 13: 10: 9: 6: 4: 3: 2: 796: 785: 782: 780: 777: 775: 772: 771: 769: 758: 753: 751: 746: 744: 739: 738: 732: 730: 726: 721: 718: 714: 709: 703: 697: 692: 691: 687: 670: 666: 662: 656: 653: 640: 636: 632: 626: 623: 608: 602: 599: 588: 582: 579: 573: 568: 564: 558: 555: 542: 538: 534: 527: 524: 511: 507: 503: 497: 494: 489: 485: 480: 475: 471: 467: 463: 459: 455: 451: 450: 445: 438: 435: 422: 418: 414: 407: 404: 391: 387: 386:www.unibas.ch 383: 377: 375: 371: 358: 354: 350: 343: 340: 333: 329: 326: 324: 321: 319: 316: 314: 311: 310: 306: 304: 302: 299:) received a 298: 294: 286: 284: 282: 274: 270: 267: 265: 262: 260: 257: 255: 252: 250: 247: 245: 242: 240: 237: 235: 232: 230: 227: 225: 222: 220: 217: 215: 212: 211: 210: 204: 202: 200: 196: 191: 189: 185: 181: 177: 173: 165: 162: 158: 152: 149: 146: 145: 143: 139: 133: 132:Emma Hodcroft 130: 128: 127:Richard Neher 125: 123: 120: 119: 117: 111: 105: 102: 100: 97: 95: 92: 91: 89: 85: 78: 72: 68: 65:United States 61: 57: 56: 54: 50: 36: 32: 28: 23: 729:expanding it 722: 707: 673:. 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Index


Seattle
Basel
Switzerland
Bioinformatics
Viral phylodynamics
Open-source software
Trevor Bedford
Richard Neher
Emma Hodcroft
Webby Award
https://nextstrain.org
Seattle
Basel
open-source
viral outbreaks
pathogens
github.com
Avian influenza
Dengue
Enterovirus D68
Measles
Monkeypox virus
Mumps
SARS-CoV-2
Seasonal influenza
Tuberculosis
West Nile virus
West African Ebola 2013-16
Zika

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