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Peptide bond

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352: 1317: 344:. In the unfolded state of proteins, the peptide groups are free to isomerize and adopt both isomers; however, in the folded state, only a single isomer is adopted at each position (with rare exceptions). The trans form is preferred overwhelmingly in most peptide bonds (roughly 1000:1 ratio in trans:cis populations). However, X-Pro peptide groups tend to have a roughly 30:1 ratio, presumably because the symmetry between the C and C atoms of 175: 97: 1311: 31: 1323: 541:
is usually much faster (typically 10–100 ms) than cis-trans isomerization (10–100 s). A nonnative isomer of some peptide groups can disrupt the conformational folding significantly, either slowing it or preventing it from even occurring until the native isomer is reached. However, not all
300:, although there are reports of peptide bond hydrolysis caused by conformational strain as the peptide/protein folds into the native structure. This non-enzymatic process is thus not accelerated by transition state stabilization, but rather by ground-state destabilization. 530:) by changes that favor the single-bonded form, such as placing the peptide group in a hydrophobic environment or donating a hydrogen bond to the nitrogen atom of an X-Pro peptide group. Both of these mechanisms for lowering the activation energy have been observed in 520: 451: 414: 1566: 481: 1410: 1007:
Radzicka, Anna; Wolfenden, Richard (1996-01-01). "Rates of Uncatalyzed Peptide Bond Hydrolysis in Neutral Solution and the Transition State Affinities of Proteases".
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Due to its resonance stabilization, the peptide bond is relatively unreactive under physiological conditions, even less than similar compounds such as
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Sandberg A.; Johansson D. G.; Macao B.; Härd T. (April 2008). "SEA domain autoproteolysis accelerated by conformational strain: energetic aspects".
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Isomerization of an X-Pro peptide bond. Cis and trans isomers are at far left and far right, respectively, separated by the transition states.
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requires that the partial double bond be broken, so that the activation energy is roughly 80 kJ/mol (20 kcal/mol). However, the
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peptide groups have the same effect on folding; nonnative isomers of other peptide groups may not affect folding at all.
2229: 1129: 2392: 534:(PPIases), which are naturally occurring enzymes that catalyze the cis-trans isomerization of X-Pro peptide bonds. 1450: 1445: 2397: 2269: 1680: 1575: 1435: 1425: 1400: 1370: 1544: 1216: 457:
conformation). Amide groups can isomerize about the C'–N bond between the cis and trans forms, albeit slowly (
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O) and two amino acids joined by a peptide bond (−CO−NH−). The two joined amino acids are called a dipeptide.
489: 2323: 1477: 1380: 1352: 1122: 565:, breaking the carbonyl double bond and forming a tetrahedral intermediate. This is the pathway followed in 2207: 423: 246: 187: 1521: 1482: 386: 168: 118: 1516: 980:
Martin R. B. (December 1998). "Free energies and equilibria of peptide bond hydrolysis and formation".
726:(hardcover) (Fourth ed.). Menlo Park, CA: The Benjamin/Cummings Publishing Company, Inc. p.  1598: 1440: 1331: 1194: 1153: 222: 207: 101: 1613: 1685: 1342: 1206: 1172: 598: 337: 2034: 1506: 460: 225:
as they are synthesized by specialized enzymes rather than ribosomes. For example, the tripeptide
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and oxygen from its carboxyl group (COOH) and the other loses a hydrogen from its amino group (NH
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Watson, James; Hopkins, Nancy; Roberts, Jeffrey; Agetsinger Steitz, Joan; Weiner, Alan (1987) .
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of absorption for a peptide bond is 190–230 nm, which makes it particularly susceptible to
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Miller B. R.; Gulick A. M. (2016). "Structural Biology of Nonribosomal Peptide Synthetases".
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The formation of the peptide bond consumes energy, which, in organisms, is derived from
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makes the cis and trans isomers nearly equal in energy, as shown in the figure below.
174: 2386: 2177: 2122: 2104: 2080: 2019: 2014: 1966: 1961: 1910: 1867: 1788: 1732: 1636: 1469: 1429: 1362: 1291: 1164: 1145: 706: 417: 261:(the addition of water). The hydrolysis of peptide bonds in water releases 8–16  214:
to produce proteins via reactions that differ in details from dehydration synthesis.
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Griffiths A. J.; Miller J. H.; Suzuki D. T.; Lewontin R. C.; Gelbart W. M. (2000).
673:"Glossary of terms used in physical organic chemistry (IUPAC Recommendations 1994)" 341: 278: 96: 363:
associated with the peptide group (defined by the four atoms C–C'–N–C) is denoted
121:. In this kind of condensation, two amino acids approach each other, with the non- 589:
or, more specifically, a thiacyclol, an oxacyclol or an azacyclol, respectively.
2098: 2057: 1986: 1951: 1946: 1905: 1877: 1844: 1826: 1798: 1651: 1641: 1631: 1603: 1501: 1251: 760: 672: 566: 274: 266: 226: 156: 1310: 803: 624:"Nomenclature and Symbolism for Amino Acids and Peptides. Recommendations 1983" 2338: 2244: 2221: 2217: 2173: 2137: 2114: 1897: 1701: 1667: 1623: 1055: 309: 258: 230: 195: 179: 122: 1028: 698: 649: 17: 2367: 2280: 2090: 2009: 1956: 1920: 1859: 1836: 1783: 1714: 1646: 1236: 1211: 1078: 689: 527: 325: 289: 282: 221:, are called ribosomal peptides as they are made by ribosomes, but many are 109: 1104: 1063: 925: 916: 899: 884: 788: 994:
10.1002/(SICI)1097-0282(19980415)45:5<351::AID-BIP3>3.0.CO;2-K
966: 851:"Ribosomal biosynthesis of the cyclic peptide toxins of Amanita mushrooms" 657: 30: 2355: 2351: 2347: 2284: 2257: 2199: 2150: 2146: 2044: 1991: 1813: 1755: 1737: 578: 559: 297: 211: 137: 66: 27:
Covalent chemical bond between amino acids in a peptide or protein chain
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of the other amino acid molecule, causing the release of a molecule of
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Wu G.; Fang Y. Z.; Yang S.; Lupton J. R.; Turner N. D. (March 2004).
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and, more generally, in N–O acyl exchange reactions such as those of
562: 293: 234: 203: 62: 1322: 2004: 1675: 582: 574: 551: 350: 329: 262: 173: 160: 133: 95: 47: 29: 1114: 1548: 1118: 755:. Methods in Molecular Biology. Vol. 1401. pp. 3–29. 88:, which is another type of amide bond between two amino acids. 573:. When the functional group attacking the peptide bond is a 1077:
Goldfarb A. R.; Saidel L. J.; Mosovich E. (November 1951).
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character. The partial double bond renders the amide group
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to form a peptide bond (red) with expulsion of water (blue)
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4-(p-hydroxybenzylidene)-5-imidazolinone (HBI) formation
900:"Glutathione metabolism and its implications for health" 941:"Glutathione metabolism and its selective modification" 198:
held together by peptide bonds (and sometimes by a few
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at 25 °C of between 350 and 600 years per bond.
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of electrons on the nitrogen atom gives the group a
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Freeman. 778: 688: 639: 585:, the resulting molecule may be called a 506: 491: 462: 437: 425: 400: 388: 368: 1529:Polyhedral skeletal electron pair theory 1009:Journal of the American Chemical Society 483: seconds at room temperature). The 2324:Methylidene-imidazolone (MIO) formation 610: 515:{\displaystyle \omega =\pm 90^{\circ }} 151:The amide bond is synthesized when the 831: 821: 526:can be lowered (and the isomerization 320:Cis/trans isomers of the peptide group 229:is synthesized in two steps from free 2208:Lysine tyrosylquinone (LTQ) formation 7: 618: 616: 614: 446:{\displaystyle \omega =180^{\circ }} 178:The dehydration condensation of two 1681:Glycosyl phosphatidylinositol (GPI) 1083:The Journal of Biological Chemistry 945:The Journal of Biological Chemistry 245:, which is not a peptide bond) and 641:10.1111/j.1432-1033.1984.tb07877.x 409:{\displaystyle \omega =0^{\circ }} 324:Significant delocalisation of the 25: 1992:Oxidative deamination to aldehyde 136:moiety of the other. One loses a 1321: 1315: 1309: 628:European Journal of Biochemistry 257:A peptide bond can be broken by 69:number two) of another, along a 1580:posttranslational modifications 723:Molecualar Biology of the Gene 1: 1096:10.1016/S0021-9258(19)52465-6 958:10.1016/S0021-9258(19)77815-6 1044:Journal of Molecular Biology 939:Meister A. (November 1988). 476:{\displaystyle \tau \sim 20} 107:When two amino acids form a 1799:Topaquinone (TPQ) formation 761:10.1007/978-1-4939-3375-4_1 167:O), hence the process is a 100:Peptide bond formation via 2414: 1227:Metal–ligand multiple bond 677:Pure and Applied Chemistry 532:peptidyl prolyl isomerases 336:, occurring in either the 84:to distinguish it from an 2243:Crosslinks between three 1576:Protein primary structure 1307: 1056:10.1016/j.jmb.2008.01.051 671:Muller, P. (1994-01-01). 239:glutamate–cysteine ligase 2337:Crosslinks between four 904:The Journal of Nutrition 249:(forms a peptide bond). 80:It can also be called a 57:linking two consecutive 2136:Crosslinks between two 690:10.1351/pac199466051077 376:{\displaystyle \omega } 296:known as peptidases or 1784:Porphyrin ring linkage 516: 477: 453:for the trans isomer ( 447: 410: 377: 356: 247:glutathione synthetase 183: 104: 35: 1845:Succinimide formation 517: 478: 448: 411: 378: 354: 223:nonribosomal peptides 208:nonribosomal peptides 177: 169:dehydration synthesis 119:condensation reaction 99: 33: 1599:Protein biosynthesis 1217:Coordinate (dipolar) 917:10.1093/jn/134.3.489 490: 461: 424: 416:for the cis isomer ( 387: 367: 217:Some peptides, like 102:dehydration reaction 1391:C–H···O interaction 1173:Electron deficiency 951:(33): 17205–17208. 599:The Proteolysis Map 420:conformation), and 330:partial double-bond 1929:Transglutamination 1376:Resonance-assisted 546:Chemical reactions 512: 473: 443: 406: 373: 357: 184: 117:, it is a type of 105: 36: 2393:Protein structure 2380: 2379: 2376: 2375: 2332: 2331: 2238: 2237: 2131: 2130: 1883:Polyglutamylation 1769:Dephosphorylation 1728:Dephosphorylation 1542: 1541: 1493:Electron counting 1464: 1463: 1353:London dispersion 1305: 1304: 1282:Metal aromaticity 1021:10.1021/ja954077c 1015:(26): 6105–6109. 867:10.1002/bip.21416 815:978-0-7167-3520-5 805:Protein synthesis 770:978-1-4939-3373-0 737:978-0-8053-9614-0 634:(1): 9–37. 1984. 524:activation energy 485:transition states 202:). Organisms use 59:alpha-amino acids 40:organic chemistry 16:(Redirected from 2405: 2398:Chemical bonding 2344: 2250: 2186:Sulfilimine bond 2164:ADP-ribosylation 2143: 2063:ADP-ribosylation 1982:ADP-ribosylation 1873:ADP-ribosylation 1850:ADP-ribosylation 1774:ADP-ribosylation 1746:ADP-ribosylation 1707: 1700:Single specific 1569: 1562: 1555: 1546: 1534:Jemmis mno rules 1386:Dihydrogen bonds 1339: 1325: 1319: 1313: 1247:Hyperconjugation 1161: 1139: 1132: 1125: 1116: 1109: 1108: 1098: 1074: 1068: 1067: 1050:(4): 1117–1129. 1039: 1033: 1032: 1004: 998: 997: 977: 971: 970: 960: 936: 930: 929: 919: 895: 889: 888: 878: 846: 840: 839: 833: 829: 827: 819: 799: 793: 792: 782: 748: 742: 741: 717: 711: 710: 692: 683:(5): 1077–1184. 668: 662: 661: 643: 620: 521: 519: 518: 513: 511: 510: 482: 480: 479: 474: 452: 450: 449: 444: 442: 441: 415: 413: 412: 407: 405: 404: 382: 380: 379: 374: 200:isopeptide bonds 21: 2413: 2412: 2408: 2407: 2406: 2404: 2403: 2402: 2383: 2382: 2381: 2372: 2328: 2302: 2275: 2234: 2212: 2190: 2168: 2127: 2123:C-mannosylation 2109: 2085: 2067: 2039: 2005:Imine formation 1933: 1915: 1892: 1888:Polyglycylation 1854: 1831: 1808: 1764:Phosphorylation 1750: 1723:Phosphorylation 1695: 1662: 1618: 1582: 1573: 1543: 1538: 1487: 1460: 1403: 1395: 1357: 1344: 1334: 1326: 1320: 1314: 1301: 1286: 1268: 1156: 1148: 1143: 1113: 1112: 1076: 1075: 1071: 1041: 1040: 1036: 1006: 1005: 1001: 979: 978: 974: 938: 937: 933: 897: 896: 892: 848: 847: 843: 830: 820: 816: 801: 800: 796: 771: 750: 749: 745: 738: 719: 718: 714: 670: 669: 665: 622: 621: 612: 607: 595: 556:electronegative 548: 539:protein folding 537:Conformational 502: 488: 487: 459: 458: 433: 422: 421: 396: 385: 384: 365: 364: 322: 306: 255: 243:isopeptide bond 190:. Peptides and 166: 147: 143: 127:carboxylic acid 94: 86:isopeptide bond 28: 23: 22: 15: 12: 11: 5: 2411: 2409: 2401: 2400: 2395: 2385: 2384: 2378: 2377: 2374: 2373: 2371: 2370: 2364: 2362: 2341: 2334: 2333: 2330: 2329: 2327: 2326: 2320: 2318: 2304: 2303: 2301: 2300: 2293: 2291: 2277: 2276: 2274: 2273: 2266: 2264: 2247: 2240: 2239: 2236: 2235: 2233: 2232: 2226: 2224: 2214: 2213: 2211: 2210: 2204: 2202: 2192: 2191: 2189: 2188: 2182: 2180: 2170: 2169: 2167: 2166: 2161: 2159:Disulfide bond 2155: 2153: 2140: 2133: 2132: 2129: 2128: 2126: 2125: 2119: 2117: 2111: 2110: 2108: 2107: 2102: 2095: 2093: 2087: 2086: 2084: 2083: 2077: 2075: 2069: 2068: 2066: 2065: 2060: 2055: 2053:Citrullination 2049: 2047: 2041: 2040: 2038: 2037: 2032: 2030:Propionylation 2027: 2022: 2017: 2012: 2007: 2002: 2000:-glycosylation 1994: 1989: 1984: 1979: 1974: 1972:Ubiquitination 1969: 1964: 1959: 1954: 1949: 1943: 1941: 1935: 1934: 1932: 1931: 1925: 1923: 1917: 1916: 1914: 1913: 1908: 1902: 1900: 1894: 1893: 1891: 1890: 1885: 1880: 1875: 1870: 1864: 1862: 1856: 1855: 1853: 1852: 1847: 1841: 1839: 1833: 1832: 1830: 1829: 1824: 1822:Palmitoylation 1818: 1816: 1810: 1809: 1807: 1806: 1804:Detyrosination 1801: 1796: 1794:Flavin linkage 1791: 1786: 1781: 1776: 1771: 1766: 1760: 1758: 1752: 1751: 1749: 1748: 1743: 1735: 1730: 1725: 1719: 1717: 1704: 1697: 1696: 1694: 1693: 1691:Detyrosination 1688: 1683: 1678: 1672: 1670: 1664: 1663: 1661: 1660: 1657:Myristoylation 1654: 1649: 1644: 1639: 1634: 1628: 1626: 1620: 1619: 1617: 1616: 1614:N–O acyl shift 1611: 1606: 1601: 1596: 1590: 1588: 1584: 1583: 1574: 1572: 1571: 1564: 1557: 1549: 1540: 1539: 1537: 1536: 1531: 1526: 1525: 1524: 1519: 1514: 1509: 1498: 1496: 1489: 1488: 1486: 1485: 1480: 1474: 1472: 1466: 1465: 1462: 1461: 1459: 1458: 1453: 1448: 1443: 1438: 1433: 1423: 1418: 1413: 1407: 1405: 1397: 1396: 1394: 1393: 1388: 1383: 1378: 1373: 1367: 1365: 1359: 1358: 1356: 1355: 1349: 1347: 1336: 1332:Intermolecular 1328: 1327: 1308: 1306: 1303: 1302: 1300: 1299: 1296: 1294: 1288: 1287: 1285: 1284: 1278: 1276: 1270: 1269: 1267: 1266: 1265: 1264: 1259: 1249: 1244: 1239: 1234: 1229: 1224: 1219: 1214: 1209: 1204: 1203: 1202: 1192: 1191: 1190: 1185: 1180: 1169: 1167: 1158: 1154:Intramolecular 1150: 1149: 1146:Chemical bonds 1144: 1142: 1141: 1134: 1127: 1119: 1111: 1110: 1089:(1): 397–404. 1069: 1034: 999: 988:(5): 351–353. 972: 931: 910:(3): 489–492. 890: 861:(5): 659–664. 841: 832:|journal= 814: 794: 769: 743: 736: 712: 663: 609: 608: 606: 603: 602: 601: 594: 591: 547: 544: 509: 505: 501: 498: 495: 472: 469: 466: 455:antiperiplanar 440: 436: 432: 429: 403: 399: 395: 392: 372: 361:dihedral angle 321: 318: 305: 302: 254: 251: 219:alpha-amanitin 194:are chains of 164: 153:carboxyl group 145: 141: 93: 90: 82:eupeptide bond 26: 24: 14: 13: 10: 9: 6: 4: 3: 2: 2410: 2399: 2396: 2394: 2391: 2390: 2388: 2369: 2366: 2365: 2363: 2361: 2357: 2353: 2349: 2345: 2342: 2340: 2335: 2325: 2322: 2321: 2319: 2317: 2313: 2309: 2305: 2299:(chromophore) 2298: 2295: 2294: 2292: 2290: 2286: 2282: 2278: 2272:(chromophore) 2271: 2268: 2267: 2265: 2263: 2259: 2255: 2251: 2248: 2246: 2241: 2231: 2228: 2227: 2225: 2223: 2219: 2215: 2209: 2206: 2205: 2203: 2201: 2197: 2193: 2187: 2184: 2183: 2181: 2179: 2178:Hydroxylysine 2175: 2171: 2165: 2162: 2160: 2157: 2156: 2154: 2152: 2148: 2144: 2141: 2139: 2134: 2124: 2121: 2120: 2118: 2116: 2112: 2106: 2105:Adenylylation 2103: 2100: 2097: 2096: 2094: 2092: 2088: 2082: 2081:Hydroxylation 2079: 2078: 2076: 2074: 2070: 2064: 2061: 2059: 2056: 2054: 2051: 2050: 2048: 2046: 2042: 2036: 2033: 2031: 2028: 2026: 2023: 2021: 2020:Succinylation 2018: 2016: 2015:Carbamylation 2013: 2011: 2008: 2006: 2003: 2001: 1999: 1995: 1993: 1990: 1988: 1985: 1983: 1980: 1978: 1975: 1973: 1970: 1968: 1967:Hydroxylation 1965: 1963: 1962:Adenylylation 1960: 1958: 1955: 1953: 1950: 1948: 1945: 1944: 1942: 1940: 1936: 1930: 1927: 1926: 1924: 1922: 1918: 1912: 1911:Glycosylation 1909: 1907: 1904: 1903: 1901: 1899: 1895: 1889: 1886: 1884: 1881: 1879: 1876: 1874: 1871: 1869: 1868:Carboxylation 1866: 1865: 1863: 1861: 1857: 1851: 1848: 1846: 1843: 1842: 1840: 1838: 1834: 1828: 1825: 1823: 1820: 1819: 1817: 1815: 1811: 1805: 1802: 1800: 1797: 1795: 1792: 1790: 1789:Adenylylation 1787: 1785: 1782: 1780: 1777: 1775: 1772: 1770: 1767: 1765: 1762: 1761: 1759: 1757: 1753: 1747: 1744: 1742: 1740: 1736: 1734: 1733:Glycosylation 1731: 1729: 1726: 1724: 1721: 1720: 1718: 1716: 1712: 1708: 1705: 1703: 1698: 1692: 1689: 1687: 1686:O-methylation 1684: 1682: 1679: 1677: 1674: 1673: 1671: 1669: 1665: 1658: 1655: 1653: 1650: 1648: 1645: 1643: 1640: 1638: 1637:Carbamylation 1635: 1633: 1630: 1629: 1627: 1625: 1621: 1615: 1612: 1610: 1607: 1605: 1602: 1600: 1597: 1595: 1592: 1591: 1589: 1585: 1581: 1577: 1570: 1565: 1563: 1558: 1556: 1551: 1550: 1547: 1535: 1532: 1530: 1527: 1523: 1520: 1518: 1515: 1513: 1510: 1508: 1507:Hückel's rule 1505: 1504: 1503: 1500: 1499: 1497: 1494: 1490: 1484: 1481: 1479: 1476: 1475: 1473: 1471: 1470:Bond cleavage 1467: 1457: 1454: 1452: 1449: 1447: 1444: 1442: 1439: 1437: 1436:Intercalation 1434: 1431: 1427: 1426:Metallophilic 1424: 1422: 1419: 1417: 1414: 1412: 1409: 1408: 1406: 1402: 1398: 1392: 1389: 1387: 1384: 1382: 1379: 1377: 1374: 1372: 1369: 1368: 1366: 1364: 1360: 1354: 1351: 1350: 1348: 1346: 1343:Van der Waals 1340: 1337: 1333: 1329: 1324: 1318: 1312: 1298: 1297: 1295: 1293: 1289: 1283: 1280: 1279: 1277: 1275: 1271: 1263: 1260: 1258: 1255: 1254: 1253: 1250: 1248: 1245: 1243: 1240: 1238: 1235: 1233: 1230: 1228: 1225: 1223: 1220: 1218: 1215: 1213: 1210: 1208: 1205: 1201: 1198: 1197: 1196: 1193: 1189: 1186: 1184: 1181: 1179: 1176: 1175: 1174: 1171: 1170: 1168: 1166: 1162: 1159: 1155: 1151: 1147: 1140: 1135: 1133: 1128: 1126: 1121: 1120: 1117: 1106: 1102: 1097: 1092: 1088: 1084: 1080: 1073: 1070: 1065: 1061: 1057: 1053: 1049: 1045: 1038: 1035: 1030: 1026: 1022: 1018: 1014: 1010: 1003: 1000: 995: 991: 987: 983: 976: 973: 968: 964: 959: 954: 950: 946: 942: 935: 932: 927: 923: 918: 913: 909: 905: 901: 894: 891: 886: 882: 877: 872: 868: 864: 860: 856: 852: 845: 842: 837: 825: 817: 811: 807: 806: 798: 795: 790: 786: 781: 776: 772: 766: 762: 758: 754: 747: 744: 739: 733: 729: 725: 724: 716: 713: 708: 704: 700: 696: 691: 686: 682: 678: 674: 667: 664: 659: 655: 651: 647: 642: 637: 633: 629: 625: 619: 617: 615: 611: 604: 600: 597: 596: 592: 590: 588: 584: 580: 576: 572: 568: 564: 561: 557: 553: 545: 543: 540: 535: 533: 529: 525: 507: 503: 499: 496: 493: 486: 470: 467: 464: 456: 438: 434: 430: 427: 419: 418:synperiplanar 401: 397: 393: 390: 370: 362: 353: 349: 347: 343: 342:trans isomers 339: 335: 331: 327: 319: 317: 315: 311: 303: 301: 299: 295: 291: 286: 284: 280: 276: 272: 268: 264: 260: 252: 250: 248: 244: 240: 236: 232: 228: 224: 220: 215: 213: 209: 205: 201: 197: 193: 189: 181: 176: 172: 170: 162: 158: 154: 149: 139: 135: 131: 128: 124: 120: 116: 112: 111: 103: 98: 91: 89: 87: 83: 78: 76: 72: 68: 64: 60: 56: 55:chemical bond 53: 49: 45: 41: 32: 19: 18:Amide linkage 2035:Butyrylation 1997: 1738: 1609:Racemization 1594:Peptide bond 1593: 1512:Baird's rule 1232:Charge-shift 1195:Hypervalence 1086: 1082: 1072: 1047: 1043: 1037: 1012: 1008: 1002: 985: 981: 975: 948: 944: 934: 907: 903: 893: 858: 854: 844: 804: 797: 752: 746: 722: 715: 680: 676: 666: 631: 627: 558:atom on the 549: 536: 531: 358: 323: 307: 287: 279:Gibbs energy 256: 216: 185: 150: 115:peptide bond 114: 108: 106: 81: 79: 44:peptide bond 43: 37: 34:Peptide bond 2099:Diphthamide 2058:Methylation 2025:Lactylation 1987:Deamination 1977:Sumoylation 1952:Acetylation 1947:Methylation 1906:Deamidation 1878:Methylation 1827:Prenylation 1652:Methylation 1642:Formylation 1632:Acetylation 1604:Proteolysis 1502:Aromaticity 1478:Heterolysis 1456:Salt bridge 1401:Noncovalent 1371:Low-barrier 1252:Aromaticity 1242:Conjugation 1222:Pi backbond 982:Biopolymers 855:Biopolymers 567:proteolysis 316:radiation. 253:Degradation 231:amino acids 227:glutathione 206:to produce 196:amino acids 180:amino acids 157:amino group 2387:Categories 2222:Tryptophan 2218:Tryptophan 2174:Methionine 2115:Tryptophan 1898:Asparagine 1668:C terminus 1624:N terminus 1430:aurophilic 1411:Mechanical 605:References 310:wavelength 269:(2–4  259:hydrolysis 241:(forms an 171:reaction. 123:side chain 113:through a 2368:Desmosine 2281:Histidine 2101:formation 2091:Histidine 2010:Glycation 1957:Acylation 1921:Glutamine 1860:Glutamate 1837:Aspartate 1779:Sulfation 1715:Threonine 1676:Amidation 1647:Glycation 1522:spherical 1483:Homolysis 1446:Cation–pi 1421:Chalcogen 1381:Symmetric 1237:Hapticity 1029:0002-7863 834:ignored ( 824:cite book 707:195819485 699:1365-3075 650:0014-2956 528:catalyzed 508:∘ 500:± 494:ω 468:∼ 465:τ 439:∘ 428:ω 402:∘ 391:ω 371:ω 326:lone pair 298:proteases 290:catalyzed 283:half life 233:, by two 212:ribosomes 110:dipeptide 92:Synthesis 61:from C1 ( 2356:Allysine 2352:Allysine 2348:Allysine 2285:Tyrosine 2258:Tyrosine 2200:Tyrosine 2151:Cysteine 2147:Cysteine 2045:Arginine 1814:Cysteine 1756:Tyrosine 1451:Anion–pi 1441:Stacking 1363:Hydrogen 1274:Metallic 1165:Covalent 1157:(strong) 1105:14907727 1064:18308334 926:14988435 885:20564017 789:26831698 593:See also 579:hydroxyl 560:carbonyl 192:proteins 138:hydrogen 67:nitrogen 52:covalent 50:type of 2316:Glycine 2308:Alanine 2289:Glycine 2262:Glycine 2073:Proline 1741:-GlcNAc 1587:General 1416:Halogen 1262:bicyclo 1207:Agostic 967:3053703 876:4001729 780:4760355 658:6692818 571:inteins 346:proline 304:Spectra 294:enzymes 235:enzymes 204:enzymes 77:chain. 75:protein 71:peptide 2360:Lysine 2312:Serine 2254:Serine 2196:Lysine 1939:Lysine 1711:Serine 1517:Möbius 1345:forces 1335:(weak) 1103:  1062:  1027:  965:  924:  883:  873:  812:  787:  777:  767:  734:  705:  697:  656:  648:  587:cyclol 563:carbon 552:esters 334:planar 210:, and 130:moiety 63:carbon 46:is an 1659:(Gly) 1495:rules 1404:other 1292:Ionic 1200:3c–4e 1188:8c–2e 1183:4c–2e 1178:3c–2e 703:S2CID 583:amine 575:thiol 277:) of 161:water 134:amino 125:(C1) 48:amide 1578:and 1257:homo 1212:Bent 1101:PMID 1060:PMID 1025:ISSN 963:PMID 922:PMID 881:PMID 836:help 810:ISBN 785:PMID 765:ISBN 732:ISBN 695:ISSN 654:PMID 646:ISSN 359:The 308:The 271:kcal 42:, a 2339:AAs 2245:AAs 2138:AAs 1702:AAs 1091:doi 1087:193 1052:doi 1048:377 1017:doi 1013:118 990:doi 953:doi 949:263 912:doi 908:134 871:PMC 863:doi 775:PMC 757:doi 728:168 685:doi 636:doi 632:138 581:or 435:180 340:or 338:cis 292:by 275:mol 267:mol 188:ATP 73:or 38:In 2389:: 1099:. 1085:. 1081:. 1058:. 1046:. 1023:. 1011:. 986:45 984:. 961:. 947:. 943:. 920:. 906:. 902:. 879:. 869:. 859:94 857:. 853:. 828:: 826:}} 822:{{ 783:. 773:. 763:. 730:. 701:. 693:. 681:66 679:. 675:. 652:. 644:. 630:. 626:. 613:^ 577:, 504:90 471:20 383:; 314:UV 263:kJ 237:: 163:(H 2358:– 2354:– 2350:– 2314:– 2310:– 2287:– 2283:– 2260:– 2256:– 2220:– 2198:– 2176:– 2149:– 1998:O 1739:O 1713:/ 1568:e 1561:t 1554:v 1432:) 1428:( 1138:e 1131:t 1124:v 1107:. 1093:: 1066:. 1054:: 1031:. 1019:: 996:. 992:: 969:. 955:: 928:. 914:: 887:. 865:: 838:) 818:. 791:. 759:: 740:. 709:. 687:: 660:. 638:: 497:= 431:= 398:0 394:= 273:/ 265:/ 165:2 146:2 142:2 20:)

Index

Amide linkage

organic chemistry
amide
covalent
chemical bond
alpha-amino acids
carbon
nitrogen
peptide
protein
isopeptide bond

dehydration reaction
dipeptide
condensation reaction
side chain
carboxylic acid
moiety
amino
hydrogen
carboxyl group
amino group
water
dehydration synthesis

amino acids
ATP
proteins
amino acids

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