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BAR domain

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are highly conserved protein dimerisation domains that occur in many proteins involved in membrane dynamics in a cell. The BAR domain is banana-shaped and binds to membrane via its concave face. It is capable of sensing membrane curvature by binding preferentially to curved membranes. BAR domains are
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Some BAR domain containing proteins have an N-terminal amphipathic helix preceding the BAR domain. This helix inserts (like in the epsin ENTH domain) into the membrane and induces curvature, which is stabilised by the BAR dimer. Amphiphysin, endophilin, BRAP1/bin2 and nadrin are examples of such
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F-BAR domains (for FCH-BAR, or EFC for Extended FCH Homology) are BAR domains that are extensions of the already established FCH domain. They are frequently found at the amino terminus of proteins. They can bind lipid membranes and can tubulate lipids in vitro and in vivo, but their exact
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Koch D, Spiwoks-Becker I, Sabanov V, Sinning A, Dugladze T, Stellmacher A, Ahuja R, Grimm J, Schüler S, Müller A, Angenstein F, Ahmed T, Diesler A, Moser M, Tom Dieck S, Spessert R, Boeckers TM, Fässler R, Hübner CA, Balschun D, Gloveli T, Kessels MM, Qualmann B (December 2011).
810:. Gene knock-out of syndapin I in mice revealed that this brain-enriched isoform of the syndapin family is crucial for proper size control of synaptic vesicles and thereby indeed helps to define 1138:
Leventis PA, Chow BM, Stewart BA, Iyengar B, Campos AR, Boulianne GL (November 2001). "Drosophila Amphiphysin is a post-synaptic protein required for normal locomotion but not endocytosis".
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Many BAR family proteins contain alternative lipid specificity domains that help target these protein to particular membrane compartments. Some also have
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a physiological process. Work of the lab of Britta Qualmann also demonstrated that syndapin I is crucial for proper targeting of the large GTPase
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physiological role still is under investigation. Examples of the F-BAR domain family are CIP4/FBP17/Toca-1, Syndapins (also called PACSINs) and
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Zhang B, Zelhof AC (July 2002). "Amphiphysins: raising the BAR for synaptic vesicle recycling and membrane dynamics. Bin-Amphiphysin-Rvsp".
2013: 1958: 1203:"Drosophila Amphiphysin is implicated in protein localization and membrane morphogenesis but not in synaptic vesicle endocytosis" 1973: 1881: 949: 742:. The Drosophila amphiphysin N-BAR (DA-N-BAR) is an example of a protein with a preference for negatively charged surfaces. 692: 595: 486: 389: 292: 195: 1836: 1759: 1495: 2025: 131: 2096: 1752: 680: 583: 474: 377: 280: 183: 1488: 729:
and thus proteins like amphiphysin and endophilin are implicated in the orchestration of vesicle scission.
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family of proteins includes several members that possess a BAR domain, including the well characterized
92: 1202: 676: 579: 470: 373: 276: 179: 124: 1397:"Endophilin BAR domain drives membrane curvature by two newly identified structure-based mechanisms" 136: 1998: 2065: 1983: 1311: 1003: 937: 811: 1087:"Proper synaptic vesicle formation and neuronal network activity critically rely on syndapin I" 2060: 1469: 1426: 1383: 1340: 1303: 1268: 1224: 1188: 1171: 1157: 1140: 1116: 1066: 995: 850: 754: 667: 570: 461: 364: 267: 170: 2050: 1459: 1451: 1416: 1408: 1373: 1365: 1332: 1293: 1258: 1250: 1216: 1180: 1149: 1106: 1098: 1056: 1048: 985: 1707: 1687: 1677: 1662: 1641: 1636: 1631: 1621: 1616: 1611: 1606: 1601: 1580: 1575: 1570: 874: 866: 659: 562: 453: 356: 259: 162: 1550: 858: 766: 1021: 1988: 1851: 1775: 1464: 1439: 1421: 1396: 1378: 1353: 1263: 1254: 1237: 1111: 1086: 1061: 1036: 2085: 1921: 1511: 1184: 1153: 827: 116: 633: 524: 427: 330: 233: 68: 2003: 1926: 1911: 1871: 1806: 1315: 1242: 1007: 655: 558: 449: 352: 255: 158: 1323:
Weissenhorn W (August 2005). "Crystal structure of the endophilin-A1 BAR domain".
536: 80: 2070: 2055: 1978: 1968: 1948: 1943: 1938: 1901: 1856: 1831: 1816: 1811: 1796: 1238:"Drosophila amphiphysin functions during synaptic Fasciclin II membrane cycling" 710: 1455: 2045: 2040: 2035: 2020: 2008: 1993: 1933: 1906: 1896: 1891: 1886: 1876: 1846: 1841: 1826: 1801: 1791: 1336: 916: 722: 1412: 1369: 1282:"BAR domains as sensors of membrane curvature: the amphiphysin BAR structure" 974:"BAR domains as sensors of membrane curvature: the amphiphysin BAR structure" 2030: 1953: 1866: 1861: 1786: 1723: 1298: 1281: 1220: 990: 973: 926: 807: 1473: 1430: 1387: 1344: 1307: 1272: 1228: 1192: 1161: 1120: 1102: 1070: 1052: 999: 120: 39: 17: 1733: 910: 758: 531: 75: 1201:
Zelhof AC, Bao H, Hardy RW, Razzaq A, Zhang B, Doe CQ (December 2001).
898: 894: 815: 794: 790: 726: 104: 99: 1682: 890: 886: 882: 878: 786: 782: 778: 774: 687: 590: 481: 384: 287: 190: 1744: 1702: 1697: 1692: 1672: 1667: 1657: 1626: 1565: 1354:"Mechanism of endophilin N-BAR domain-mediated membrane curvature" 932: 1480: 1596: 1560: 1555: 1545: 1540: 1535: 1530: 1525: 922: 870: 862: 854: 846: 835: 831: 770: 762: 750: 649: 628: 552: 519: 443: 422: 346: 325: 249: 228: 152: 63: 1748: 1484: 1440:"Structural basis of membrane invagination by F-BAR domains" 1280:
Peter BJ, Kent HM, Mills IG, et al. (January 2004).
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Peter BJ, Kent HM, Mills IG, et al. (January 2004).
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named after three proteins that they are found in: Bin,
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Group of highly conserved protein dimerisation domains
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Frost A, Perera R, Roux A, et al. (March 2008).
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Masuda M, Takeda S, Sone M, et al. (June 2006).
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Gallop JL, Jao CC, Kent HM, et al. (June 2006).
1037:"Let's go bananas: revisiting the endocytic BAR code" 925:- protein family with a combination of BAR-like and 717:
BAR domains occur in combinations with other domains
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HGNC: HUGO gene nomenclature committee. 989: 961: 606: 497: 400: 303: 206: 29: 1022:"Gene group: N-BAR domain containing" 842:Human proteins containing this domain 746:Human proteins containing this domain 7: 1255:10.1523/JNEUROSCI.23-33-10710.2003 25: 501:Vps5 C terminal like (BAR domain) 1185:10.1034/j.1600-0854.2002.30702.x 1154:10.1034/j.1600-0854.2001.21113.x 1: 644:Available protein structures: 547:Available protein structures: 438:Available protein structures: 341:Available protein structures: 244:Available protein structures: 147:Available protein structures: 44:Structure of amphiphysin BAR. 2092:Peripheral membrane proteins 913:, includes a BAR-like domain 2113: 1456:10.1016/j.cell.2007.12.041 210:Bin/amphiphysin/Rvs domain 1782: 1337:10.1016/j.jmb.2005.06.013 639: 542: 433: 404:EFC/F-BAR homology domain 336: 307:BAR domain of APPL family 239: 142: 37: 1413:10.1038/sj.emboj.7601176 1370:10.1038/sj.emboj.7601174 1299:10.1126/science.1092586 1221:10.1242/dev.128.24.5005 991:10.1126/science.1092586 738:proteins containing an 1103:10.1038/emboj.2011.339 1053:10.1038/emboj.2011.266 704:In molecular biology, 919:, a BAR-like domain 938:Membrane curvature 812:membrane curvature 801:F-BAR (EFC) domain 2079: 2078: 1742: 1741: 702: 701: 698: 697: 693:structure summary 605: 604: 601: 600: 596:structure summary 496: 495: 492: 491: 487:structure summary 399: 398: 395: 394: 390:structure summary 302: 301: 298: 297: 293:structure summary 205: 204: 201: 200: 196:structure summary 16:(Redirected from 2104: 1769: 1762: 1755: 1746: 1717:Related articles 1505: 1498: 1491: 1482: 1477: 1467: 1434: 1424: 1391: 1381: 1364:(12): 2898–910. 1348: 1319: 1301: 1276: 1266: 1232: 1196: 1165: 1125: 1124: 1114: 1081: 1075: 1074: 1064: 1032: 1026: 1025: 1018: 1012: 1011: 993: 969: 641: 607: 544: 498: 435: 401: 338: 304: 241: 207: 144: 42: 30: 21: 2112: 2111: 2107: 2106: 2105: 2103: 2102: 2101: 2097:Protein domains 2082: 2081: 2080: 2075: 1778: 1776:Protein domains 1773: 1743: 1738: 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Mol. Biol 1324: 1289: 1285: 1246: 1243:J. Neurosci. 1241: 1212: 1206: 1176: 1170: 1145: 1139: 1094: 1090: 1079: 1044: 1040: 1030: 1016: 981: 977: 845: 825: 804: 749: 739: 736: 733:N-BAR domain 720: 705: 703: 2071:zinc finger 1208:Development 723:SH3 domains 711:Amphiphysin 706:BAR domains 615:Identifiers 506:Identifiers 409:Identifiers 312:Identifiers 215:Identifiers 50:Identifiers 2086:Categories 1729:BAR domain 956:References 917:IMD domain 656:structures 623:BAR-3-WASP 559:structures 450:structures 353:structures 256:structures 159:structures 33:BAR domain 18:Bar domain 1959:EcoEI_R_C 1724:PX domain 1651:SNX-Other 808:muniscins 713:and Rvs. 537:IPR015404 105:PDOC51021 81:IPR004148 1734:Retromer 1474:18329367 1431:16763557 1388:16763559 1345:16023669 1308:14645856 1273:14627656 1229:11748137 1193:12047553 1162:11733051 1121:21926968 1071:21878992 1000:14645856 911:Arfaptin 905:See also 851:ARHGAP17 759:ARHGAP44 755:ARHGAP17 673:RCSB PDB 576:RCSB PDB 532:InterPro 467:RCSB PDB 370:RCSB PDB 273:RCSB PDB 176:RCSB PDB 76:InterPro 1989:Kringle 1882:CGI-121 1852:BTB/POZ 1519:SNX-BAR 1465:2384079 1422:1500852 1379:1500843 1316:6104655 1286:Science 1264:6740931 1197:Review. 1172:Traffic 1141:Traffic 1112:3243622 1062:3181480 1008:6104655 978:Science 929:domains 899:SH3GLB2 895:SH3GLB1 865:; 861:; 857:; 849:; 816:dynamin 795:SH3GLB2 791:SH3GLB1 727:dynamin 634:PF10456 525:PF09325 428:PF00611 331:PF16746 234:PF10455 137:cd07307 100:PROSITE 93:SM00721 69:PF03114 1590:SNX-PX 1472:  1462:  1429:  1419:  1401:EMBO J 1386:  1376:  1358:EMBO J 1343:  1314:  1306:  1271:  1261:  1227:  1191:  1160:  1119:  1109:  1091:EMBO J 1069:  1059:  1041:EMBO J 1006:  998:  891:SH3GL3 887:SH3GL2 883:SH3GL1 879:SH3BP1 877:; 787:SH3GL3 783:SH3GL2 779:SH3GL1 775:SH3BP1 688:PDBsum 662:  652:  620:Symbol 591:PDBsum 565:  555:  511:Symbol 482:PDBsum 456:  446:  414:Symbol 385:PDBsum 359:  349:  317:Symbol 288:PDBsum 262:  252:  220:Symbol 191:PDBsum 165:  155:  125:SUPFAM 55:Symbol 2004:NACHT 1927:Pyrin 1907:Death 1872:Cache 1807:ADF-H 1708:SNX31 1703:SNX28 1698:SNX27 1693:SNX26 1688:SNX25 1683:SNX23 1678:SNX19 1673:SNX17 1668:SNX15 1663:SNX14 1658:SNX13 1642:SNX29 1637:SNX24 1632:SNX22 1627:SNX21 1622:SNX20 1617:SNX16 1612:SNX12 1607:SNX11 1602:SNX10 1581:SNX33 1576:SNX32 1571:SNX30 1566:SNX18 1312:S2CID 1004:S2CID 933:Epsin 893:; 889:; 885:; 875:RICH2 867:DNMBP 740:N-BAR 320:BAR-3 223:BAR-2 121:SCOPe 112:SCOP2 88:SMART 2056:WD40 2051:TRIO 1984:HEAT 1979:FYVE 1974:FGGY 1969:ENTH 1949:DHR2 1944:DHR1 1939:DHHC 1922:CARD 1902:CVHN 1857:BZIP 1832:BESS 1817:ARID 1812:ANTH 1797:ACDC 1597:SNX3 1561:SNX9 1556:SNX8 1551:SNX7 1546:SNX6 1541:SNX5 1536:SNX4 1531:SNX2 1526:SNX1 1470:PMID 1444:Cell 1427:PMID 1384:PMID 1341:PMID 1304:PMID 1269:PMID 1225:PMID 1189:PMID 1158:PMID 1117:PMID 1067:PMID 996:PMID 923:SNX8 897:; 873:; 871:GMIP 863:BIN3 859:BIN2 855:BIN1 847:AMPH 836:SNX9 834:and 832:SNX1 826:The 771:BIN3 767:BIN2 763:BIN1 751:AMPH 681:PDBj 677:PDBe 660:ECOD 650:Pfam 629:Pfam 584:PDBj 580:PDBe 563:ECOD 553:Pfam 520:Pfam 514:Vps5 475:PDBj 471:PDBe 454:ECOD 444:Pfam 423:Pfam 378:PDBj 374:PDBe 357:ECOD 347:Pfam 326:Pfam 281:PDBj 277:PDBe 260:ECOD 250:Pfam 229:Pfam 184:PDBj 180:PDBe 163:ECOD 153:Pfam 117:1uru 64:Pfam 2066:YTH 2046:SUN 2041:SH3 2036:SH2 2021:PDZ 2014:LOV 2009:PAS 1999:LRR 1994:LIM 1964:EF1 1934:DEP 1917:DED 1897:CUT 1892:CUB 1887:CRM 1877:CBS 1847:BPS 1842:BMC 1837:BIR 1827:BEN 1822:BAR 1802:ACT 1792:ABM 1460:PMC 1452:doi 1448:132 1417:PMC 1409:doi 1374:PMC 1366:doi 1333:doi 1329:351 1294:doi 1290:303 1259:PMC 1251:doi 1217:doi 1213:128 1181:doi 1150:doi 1107:PMC 1099:doi 1057:PMC 1049:doi 986:doi 982:303 668:PDB 571:PDB 462:PDB 417:FCH 365:PDB 268:PDB 171:PDB 132:CDD 58:BAR 2088:: 2061:X8 2031:PX 2026:PH 1954:DM 1912:DD 1867:C2 1862:C1 1787:3H 1468:. 1458:. 1446:. 1442:. 1425:. 1415:. 1405:25 1403:. 1399:. 1382:. 1372:. 1362:25 1360:. 1356:. 1339:. 1327:. 1310:. 1302:. 1288:. 1284:. 1267:. 1257:. 1247:23 1240:. 1223:. 1211:. 1205:. 1187:. 1175:. 1156:. 1144:. 1115:. 1105:. 1095:30 1093:. 1089:. 1065:. 1055:. 1045:30 1043:. 1039:. 1002:. 994:. 980:. 976:. 964:^ 927:PX 901:; 881:; 869:; 853:; 838:. 797:. 793:; 789:; 785:; 781:; 777:; 773:; 769:; 765:; 761:; 757:; 753:; 679:; 675:; 658:/ 582:; 578:; 561:/ 473:; 469:; 452:/ 376:; 372:; 355:/ 279:; 275:; 258:/ 182:; 178:; 161:/ 123:/ 119:/ 1768:e 1761:t 1754:v 1504:e 1497:t 1490:v 1476:. 1454:: 1433:. 1411:: 1390:. 1368:: 1347:. 1335:: 1318:. 1296:: 1275:. 1253:: 1231:. 1219:: 1195:. 1183:: 1177:3 1164:. 1152:: 1146:2 1123:. 1101:: 1073:. 1051:: 1010:. 988:: 20:)

Index

Bar domain

Pfam
PF03114
InterPro
IPR004148
SMART
SM00721
PROSITE
PDOC51021
SCOP2
1uru
SCOPe
SUPFAM
CDD
cd07307
Pfam
structures
ECOD
PDB
RCSB PDB
PDBe
PDBj
PDBsum
structure summary
Pfam
PF10455
Pfam
structures
ECOD

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