Knowledge (XXG)

C19orf44

Source πŸ“

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C19orf44 is shown to be expressed at low levels in various tissues throughout the body as shown by NCBI's EST Profile. It most highly expressed in the testis and ovary, but also has significant expression in the thyroid and parathyroid. C19orf44 is expressed in all stages of development, except for
845:) that is highly conserved throughout its orthologs. This protein is most highly expressed in the testis and ovary, but also has significant expression in the thyroid and parathyroid. Other names for this protein include: LOC84167. 841:. C19orf44 is an uncharacterized protein with an unknown function in humans. C19orf44 is non-limiting implying that the protein (and gene) exists in other species besides human. The protein contains one domain of unknown function ( 1789:
Vinayagam A, Stelzl U, Foulle R, Plassmann S, Zenkner M, Timm J, Assmus HE, Andrade-Navarro MA, Wanker EE (September 2011). "A directed protein interaction network for investigating intracellular signal transduction".
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using ClustalW provided evidence that the DUF in C19orf44 is highly conserved in its orthologs. The table below represents a small selection of the orthologs found using
930:
C19orf44 has experimentally determined phosphorylation sites at the S114 and S213 positions. Other predicted post-translational modifications were found using tools on
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Cartoon image illustrating the C19orf44 protein and its predicted features. Image created using the DOG software from The CUCKOO WorkGroup.
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Horton P, Nakai K (1997). "Better prediction of protein cellular localization sites with the k nearest neighbors classifier".
132: 107: 1234: 1213: 246: 145: 992: 239: 138: 842: 604: 57: 1645: 1369:"AceView: Gene:C19orf44, a comprehensive annotation of human, mouse and worm genes with mRNAs or ESTsAceView" 585: 1566:
Liu W, Xie Y, Ma J, Luo X, Nie P, Zuo Z, Lahrmann U, Zhao Q, Zheng Y, Zhao Y, Xue Y, Ren J (October 2015).
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of C19orf44 have been found in most mammals and a select few other vertebrates and invertebrates.
1815: 1166: 988: 828: 81: 922:. Additionally, there is a domain of unknown function (DUF) located from amino acid 474 to 641. 750: 729: 699: 678: 1343: 1864: 1833:
Rolland T, Taşan M, Charloteaux B, Pevzner SJ, Zhong Q, Sahni N, et al. (November 2014).
1807: 1624: 1597: 1443: 915: 77: 37: 1854: 1846: 1799: 1587: 1579: 1393:"Homo sapiens chromosome 19 open reading frame 44 (C19orf44), transcrip - Nucleotide - NCBI" 326: 257: 201: 156: 1317:"C19orf44 chromosome 19 open reading frame 44 [Homo sapiens (human)] - Gene - NCBI" 301: 918:
of 5.52. The amino acid sequence for C19orf44 was found to be serine rich using tools on
1859: 1834: 1592: 1567: 945: 911: 1882: 858: 1583: 1568:"IBS: an illustrator for the presentation and visualization of biological sequences" 1519:"uncharacterized protein C19orf44 isoform 1 [Homo sapiens] - Protein - NCBI" 61: 1819: 1518: 1392: 959: 939: 319: 98: 1617:
Proceedings. International Conference on Intelligent Systems for Molecular Biology
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National Center for Biotechnology Information, U.S. National Library of Medicine
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National Center for Biotechnology Information, U.S. National Library of Medicine
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in infants. There is an increased expression of C19orf44 in a developing fetus.
935: 1850: 402: 1803: 886: 870: 862: 218: 115: 65: 1491: 1189: 854: 504: 462: 340: 285: 272: 184: 171: 73: 1868: 1811: 1693: 1601: 1765: 1669: 1628: 1316: 1287: 814: 809: 48:, chromosome 19 open reading frame 44, Chromosome 19 open reading frame 44 919: 798: 649: 630: 963: 834: 616: 571: 1467: 931: 782: 526: 1344:"Tissue expression of C19orf44 - Summary - The Human Protein Atlas" 1180:
C19orf44 has been found to interact with various proteins from the
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Position of C19orf44 on chromosome 19. Image taken from GeneCards.
891: 1717: 866: 838: 1741: 1542: 309: 1835:"A proteome-scale map of the human interactome network" 474: 1543:"ExPASy: SIB Bioinformatics Resource Portal - Home" 743: 718: 692: 667: 1288:"Entrez Gene: Chromosome 19 open reading frame 44" 1230: 1228: 1226: 1209: 1207: 1205: 934:and are shown in the protein illustration below. 256: 155: 1718:"National Center for Biotechnology Information" 1235:GRCm38: Ensembl release 89: ENSMUSG00000052794 1184:method. Interactions with Hsp90 co-chaperone ( 938:is predicted at S3. There is also a predicted 1492:"SAPS < Sequence Statistics < EMBL-EBI" 958:C19orf44 is predicted to be localized in the 8: 1367:Thierry-Mieg, Danielle; Thierry-Mieg, Jean. 1192:associated protein (SPERT) have been found. 1214:GRCh38: Ensembl release 89: ENSG00000105072 1694:"BLAST: Basic Local Alignment Search Tool" 837:that in humans is encoded by the C19orf44 500: 297: 196: 93: 1858: 1591: 1766:"Multiple Sequence Alignment - CLUSTALW" 1742:"TimeTree :: The Timescale of Life" 1670:"Multiple Sequence Alignment - CLUSTALW" 1000: 1201: 16:Mammalian protein found in Homo sapiens 885:C19orf44 is located on the nineteenth 18: 1640: 1638: 1513: 1511: 1438: 1436: 1338: 1336: 1311: 1309: 1307: 1305: 1303: 261: 222: 217: 160: 119: 114: 7: 942:motif from amino acid 212 to 221. 857:in length, and has an unprocessed 740: 715: 689: 664: 640: 621: 595: 576: 550: 531: 479: 397: 335: 314: 14: 926:Post-translational modifications 245: 238: 232: 209: 144: 137: 131: 106: 1002:C19orf44 Significant Orthologs 463:More reference expression data 1: 1584:10.1093/bioinformatics/btv362 1468:"ExPASy - Compute pI/Mw tool" 1417:"C19orf44 - Entry on Aceview" 1015:Accession Number (from NCBI) 230: 129: 1889:Genes on human chromosome 19 993:Multiple sequence alignments 1905: 1851:10.1016/j.cell.2014.10.050 865:in length. It contains 10 853:The entire gene is 25,416 1804:10.1126/scisignal.2001699 1646:"EST Profile - Hs.631627" 1270:"Mouse PubMed Reference:" 1252:"Human PubMed Reference:" 1031:Golden Snub-nosed Monkey 877:that exist for C19orf44. 813: 808: 804: 797: 781: 762: 747: 722: 711: 696: 671: 660: 647: 643: 628: 624: 615: 602: 598: 583: 579: 570: 557: 553: 538: 534: 525: 510: 503: 499: 487: 482: 473: 460: 409: 400: 347: 338: 308: 300: 296: 279: 266: 229: 208: 199: 195: 178: 165: 128: 105: 96: 92: 55: 52: 42: 35: 30: 26: 21: 1027:Rhinopithecus roxellana 437:Rostral migratory stream 1141:Mizuhopecten yessoensis 768:Chr 19: 16.5 – 16.52 Mb 433:external carotid artery 429:internal carotid artery 1698:blast.ncbi.nlm.nih.gov 1021:Sequence Identity (%) 979:Homology and Evolution 950: 936:N-terminal acetylation 897: 775:Chr 8: 73.2 – 73.21 Mb 449:neural layer of retina 1084:Monodelphis domestica 948: 914:of 71,343 Da, and an 895: 873:protein. There are 7 122:Chromosome 19 (human) 1722:www.ncbi.nlm.nih.gov 1650:www.ncbi.nlm.nih.gov 1523:www.ncbi.nlm.nih.gov 1397:www.ncbi.nlm.nih.gov 1373:www.ncbi.nlm.nih.gov 1348:www.proteinatlas.org 1321:www.ncbi.nlm.nih.gov 1182:two-hybrid screening 1176:Interacting Proteins 869:that code for a 657 224:Chromosome 8 (mouse) 86:C19orf44 - orthologs 1003: 413:seminiferous tubule 1122:Astyanax mexicanus 1001: 951: 898: 829:open reading frame 605:ENSMUSG00000052794 379:anterior pituitary 355:right uterine tube 1792:Science Signaling 1448:www.genecards.org 1158: 1157: 1107:Green Sea Turtle 1018:Divergence (MYA) 1008:Genus and Species 916:isoelectric point 824: 823: 820: 819: 793: 792: 758: 757: 737: 736: 707: 706: 686: 685: 656: 655: 637: 636: 611: 610: 592: 591: 566: 565: 547: 546: 495: 494: 491: 490: 469: 468: 456: 455: 394: 393: 292: 291: 191: 190: 1896: 1873: 1872: 1862: 1845:(5): 1212–1226. 1830: 1824: 1823: 1786: 1780: 1779: 1777: 1776: 1762: 1756: 1755: 1753: 1752: 1746:www.timetree.org 1738: 1732: 1731: 1729: 1728: 1714: 1708: 1707: 1705: 1704: 1690: 1684: 1683: 1681: 1680: 1666: 1660: 1659: 1657: 1656: 1642: 1633: 1632: 1612: 1606: 1605: 1595: 1563: 1557: 1556: 1554: 1553: 1539: 1533: 1532: 1530: 1529: 1515: 1506: 1505: 1503: 1502: 1488: 1482: 1481: 1479: 1478: 1464: 1458: 1457: 1455: 1454: 1440: 1431: 1430: 1428: 1427: 1413: 1407: 1406: 1404: 1403: 1389: 1383: 1382: 1380: 1379: 1364: 1358: 1357: 1355: 1354: 1340: 1331: 1330: 1328: 1327: 1313: 1298: 1297: 1295: 1294: 1284: 1278: 1277: 1266: 1260: 1259: 1248: 1242: 1232: 1221: 1211: 1169:for C19orf44 in 1004: 912:molecular weight 906:Primary Sequence 806: 805: 777: 770: 753: 741: 732: 716: 712:RefSeq (protein) 702: 690: 681: 665: 641: 622: 596: 577: 551: 532: 501: 480: 465: 445:secondary oocyte 405: 403:Top expressed in 398: 371:ventricular zone 343: 341:Top expressed in 336: 315: 298: 288: 275: 264: 249: 242: 236: 225: 213: 197: 187: 174: 163: 148: 141: 135: 124: 110: 94: 88: 47: 40: 19: 1904: 1903: 1899: 1898: 1897: 1895: 1894: 1893: 1879: 1878: 1877: 1876: 1832: 1831: 1827: 1788: 1787: 1783: 1774: 1772: 1764: 1763: 1759: 1750: 1748: 1740: 1739: 1735: 1726: 1724: 1716: 1715: 1711: 1702: 1700: 1692: 1691: 1687: 1678: 1676: 1668: 1667: 1663: 1654: 1652: 1644: 1643: 1636: 1614: 1613: 1609: 1578:(20): 3359–61. 1565: 1564: 1560: 1551: 1549: 1541: 1540: 1536: 1527: 1525: 1517: 1516: 1509: 1500: 1498: 1490: 1489: 1485: 1476: 1474: 1466: 1465: 1461: 1452: 1450: 1444:"C19orf44 Gene" 1442: 1441: 1434: 1425: 1423: 1415: 1414: 1410: 1401: 1399: 1391: 1390: 1386: 1377: 1375: 1366: 1365: 1361: 1352: 1350: 1342: 1341: 1334: 1325: 1323: 1315: 1314: 1301: 1292: 1290: 1286: 1285: 1281: 1268: 1267: 1263: 1250: 1249: 1245: 1233: 1224: 1212: 1203: 1198: 1178: 1163: 1148:XP_021343742.1 1129:XP_007246256.2 1110:XP_007072179.1 1091:XP_007489796.1 1072:XP_005661251.2 1053:XP_004277754.1 1034:XP_010359783.1 986: 981: 972: 956: 928: 910:C19orf44 has a 908: 903: 883: 875:splice variants 851: 815:View/Edit Mouse 810:View/Edit Human 773: 766: 763:Location (UCSC) 749: 728: 724: 698: 677: 673: 586:ENSG00000105072 461: 452: 447: 443: 439: 435: 431: 427: 423: 419: 415: 401: 390: 385: 381: 377: 373: 369: 365: 361: 357: 353: 339: 283: 270: 262: 252: 251: 250: 243: 223: 200:Gene location ( 182: 169: 161: 151: 150: 149: 142: 120: 97:Gene location ( 56: 43: 36: 17: 12: 11: 5: 1902: 1900: 1892: 1891: 1881: 1880: 1875: 1874: 1825: 1781: 1757: 1733: 1709: 1685: 1661: 1634: 1607: 1572:Bioinformatics 1558: 1547:www.expasy.org 1534: 1507: 1483: 1472:web.expasy.org 1459: 1432: 1408: 1384: 1359: 1332: 1299: 1279: 1261: 1243: 1222: 1200: 1199: 1197: 1194: 1177: 1174: 1162: 1159: 1156: 1155: 1152: 1149: 1146: 1143: 1137: 1136: 1133: 1130: 1127: 1126:Mexican Tetra 1124: 1118: 1117: 1114: 1111: 1108: 1105: 1103:Chelonia mydas 1099: 1098: 1095: 1092: 1089: 1086: 1080: 1079: 1076: 1073: 1070: 1067: 1061: 1060: 1057: 1054: 1051: 1050:Killer Whale 1048: 1042: 1041: 1038: 1035: 1032: 1029: 1023: 1022: 1019: 1016: 1013: 1010: 985: 982: 980: 977: 971: 968: 955: 952: 927: 924: 907: 904: 902: 899: 882: 879: 861:that is 3,446 850: 847: 827:Chromosome 19 822: 821: 818: 817: 812: 802: 801: 795: 794: 791: 790: 788: 786: 779: 778: 771: 764: 760: 759: 756: 755: 745: 744: 738: 735: 734: 720: 719: 713: 709: 708: 705: 704: 694: 693: 687: 684: 683: 669: 668: 662: 658: 657: 654: 653: 645: 644: 638: 635: 634: 626: 625: 619: 613: 612: 609: 608: 600: 599: 593: 590: 589: 581: 580: 574: 568: 567: 564: 563: 555: 554: 548: 545: 544: 536: 535: 529: 523: 522: 517: 512: 508: 507: 497: 496: 493: 492: 489: 488: 485: 484: 477: 471: 470: 467: 466: 458: 457: 454: 453: 451: 450: 446: 442: 438: 434: 430: 426: 425:primary oocyte 422: 418: 414: 410: 407: 406: 395: 392: 391: 389: 388: 384: 380: 376: 372: 368: 364: 360: 356: 352: 348: 345: 344: 332: 331: 323: 312: 306: 305: 302:RNA expression 294: 293: 290: 289: 281: 277: 276: 268: 265: 260: 254: 253: 244: 237: 231: 227: 226: 221: 215: 214: 206: 205: 193: 192: 189: 188: 180: 176: 175: 167: 164: 159: 153: 152: 143: 136: 130: 126: 125: 118: 112: 111: 103: 102: 90: 89: 54: 50: 49: 41: 33: 32: 28: 27: 24: 23: 15: 13: 10: 9: 6: 4: 3: 2: 1901: 1890: 1887: 1886: 1884: 1870: 1866: 1861: 1856: 1852: 1848: 1844: 1840: 1836: 1829: 1826: 1821: 1817: 1813: 1809: 1805: 1801: 1797: 1793: 1785: 1782: 1771: 1770:www.genome.jp 1767: 1761: 1758: 1747: 1743: 1737: 1734: 1723: 1719: 1713: 1710: 1699: 1695: 1689: 1686: 1675: 1674:www.genome.jp 1671: 1665: 1662: 1651: 1647: 1641: 1639: 1635: 1630: 1626: 1622: 1618: 1611: 1608: 1603: 1599: 1594: 1589: 1585: 1581: 1577: 1573: 1569: 1562: 1559: 1548: 1544: 1538: 1535: 1524: 1520: 1514: 1512: 1508: 1497: 1496:www.ebi.ac.uk 1493: 1487: 1484: 1473: 1469: 1463: 1460: 1449: 1445: 1439: 1437: 1433: 1422: 1418: 1412: 1409: 1398: 1394: 1388: 1385: 1374: 1370: 1363: 1360: 1349: 1345: 1339: 1337: 1333: 1322: 1318: 1312: 1310: 1308: 1306: 1304: 1300: 1289: 1283: 1280: 1275: 1271: 1265: 1262: 1257: 1253: 1247: 1244: 1240: 1236: 1231: 1229: 1227: 1223: 1219: 1215: 1210: 1208: 1206: 1202: 1195: 1193: 1191: 1187: 1183: 1175: 1173: 1172: 1171:Homo sapiens. 1168: 1165:There are no 1160: 1153: 1150: 1147: 1144: 1142: 1139: 1138: 1134: 1131: 1128: 1125: 1123: 1120: 1119: 1115: 1112: 1109: 1106: 1104: 1101: 1100: 1096: 1093: 1090: 1087: 1085: 1082: 1081: 1077: 1074: 1071: 1068: 1066: 1063: 1062: 1058: 1055: 1052: 1049: 1047: 1044: 1043: 1039: 1036: 1033: 1030: 1028: 1025: 1024: 1020: 1017: 1014: 1011: 1009: 1006: 1005: 999: 998: 994: 990: 983: 978: 976: 969: 967: 965: 961: 953: 947: 943: 941: 937: 933: 925: 923: 921: 917: 913: 905: 900: 894: 890: 889:on 19p13.11. 888: 880: 878: 876: 872: 868: 864: 860: 856: 848: 846: 844: 840: 836: 832: 830: 816: 811: 807: 803: 800: 796: 789: 787: 784: 780: 776: 772: 769: 765: 761: 754: 752: 746: 742: 739: 733: 731: 727: 721: 717: 714: 710: 703: 701: 695: 691: 688: 682: 680: 676: 670: 666: 663: 661:RefSeq (mRNA) 659: 652: 651: 646: 642: 639: 633: 632: 627: 623: 620: 618: 614: 607: 606: 601: 597: 594: 588: 587: 582: 578: 575: 573: 569: 562: 561: 556: 552: 549: 543: 542: 537: 533: 530: 528: 524: 521: 518: 516: 513: 509: 506: 502: 498: 486: 481: 478: 476: 472: 464: 459: 448: 444: 440: 436: 432: 428: 424: 420: 416: 412: 411: 408: 404: 399: 396: 386: 382: 378: 374: 370: 366: 362: 358: 354: 350: 349: 346: 342: 337: 334: 333: 330: 328: 324: 322: 321: 317: 316: 313: 311: 307: 303: 299: 295: 287: 282: 278: 274: 269: 263:8|8 B3.3 259: 255: 248: 241: 235: 228: 220: 216: 212: 207: 203: 198: 194: 186: 181: 177: 173: 168: 158: 154: 147: 140: 134: 127: 123: 117: 113: 109: 104: 100: 95: 91: 87: 83: 79: 75: 71: 67: 63: 59: 51: 46: 39: 34: 29: 25: 20: 1842: 1838: 1828: 1798:(189): rs8. 1795: 1791: 1784: 1773:. Retrieved 1769: 1760: 1749:. Retrieved 1745: 1736: 1725:. Retrieved 1721: 1712: 1701:. Retrieved 1697: 1688: 1677:. Retrieved 1673: 1664: 1653:. Retrieved 1649: 1620: 1616: 1610: 1575: 1571: 1561: 1550:. Retrieved 1546: 1537: 1526:. Retrieved 1522: 1499:. Retrieved 1495: 1486: 1475:. Retrieved 1471: 1462: 1451:. Retrieved 1447: 1424:. Retrieved 1420: 1411: 1400:. Retrieved 1396: 1387: 1376:. Retrieved 1372: 1362: 1351:. Retrieved 1347: 1324:. Retrieved 1320: 1291:. Retrieved 1282: 1273: 1264: 1255: 1246: 1179: 1170: 1164: 1140: 1121: 1102: 1083: 1064: 1046:Orcinus orca 1045: 1026: 1012:Common Name 1007: 987: 973: 957: 954:Localization 929: 909: 884: 852: 826: 825: 748: 726:NP_001275763 723: 697: 675:NM_001288834 672: 648: 629: 603: 584: 558: 539: 519: 514: 417:spermatocyte 359:right testis 325: 318: 53:External IDs 997:NCBI Blast. 940:sumoylation 863:nucleotides 383:right ovary 363:left testis 284:73,214,845 271:73,197,724 183:16,521,352 170:16,496,394 31:Identifiers 1775:2018-02-25 1751:2018-02-25 1727:2018-05-06 1703:2018-05-06 1679:2018-05-06 1655:2018-05-06 1623:: 147–52. 1552:2018-05-06 1528:2018-02-17 1501:2018-05-06 1477:2018-05-06 1453:2018-02-17 1426:2018-04-17 1402:2018-02-05 1378:2018-02-05 1353:2018-05-06 1326:2018-02-05 1293:2018-05-06 1241:, May 2017 1220:, May 2017 1196:References 1069:Wild Boar 1065:Sus scrofa 970:Expression 887:chromosome 871:amino acid 855:base pairs 387:left ovary 329:(ortholog) 66:HomoloGene 1190:spermatid 989:Orthologs 984:Orthologs 751:NP_082446 730:NP_115583 700:NM_028170 679:NM_032207 505:Orthologs 421:spermatid 74:GeneCards 1883:Category 1869:25416956 1812:21900206 1602:26069263 1237:– 1216:– 1167:paralogs 1161:Paralogs 1145:Scallop 1088:Opossum 920:EMBL-EBI 799:Wikidata 441:gastrula 367:testicle 162:19p13.11 78:C19orf44 45:C19orf44 22:C19orf44 1860:4266588 1820:7418133 1629:9322029 1593:4595897 1239:Ensembl 1218:Ensembl 1188:), and 964:cytosol 960:nucleus 901:Protein 835:protein 617:UniProt 572:Ensembl 511:Species 304:pattern 62:1919504 38:Aliases 1867:  1857:  1818:  1810:  1627:  1600:  1590:  932:ExPASy 785:search 783:PubMed 650:Q922C1 631:Q9H6X5 527:Entrez 475:BioGPS 1816:S2CID 1186:CDC37 1154:24.4 1135:28.2 1116:35.2 1097:45.5 1078:60.1 1059:83.2 1040:86.9 881:Locus 867:exons 833:is a 560:72254 541:84167 520:Mouse 515:Human 375:gonad 351:sperm 327:Mouse 320:Human 267:Start 202:Mouse 166:Start 99:Human 70:12975 1865:PMID 1839:Cell 1808:PMID 1625:PMID 1598:PMID 1421:NCBI 1151:797 1132:435 1113:312 1094:159 859:mRNA 849:Gene 839:gene 310:Bgee 258:Band 219:Chr. 157:Band 116:Chr. 1855:PMC 1847:doi 1843:159 1800:doi 1588:PMC 1580:doi 1075:96 1056:96 1037:29 962:or 843:DUF 483:n/a 280:End 179:End 82:OMA 58:MGI 1885:: 1863:. 1853:. 1841:. 1837:. 1814:. 1806:. 1794:. 1768:. 1744:. 1720:. 1696:. 1672:. 1648:. 1637:^ 1619:. 1596:. 1586:. 1576:31 1574:. 1570:. 1545:. 1521:. 1510:^ 1494:. 1470:. 1446:. 1435:^ 1419:. 1395:. 1371:. 1346:. 1335:^ 1319:. 1302:^ 1272:. 1254:. 1225:^ 1204:^ 966:. 831:44 286:bp 273:bp 185:bp 172:bp 80:; 76:: 72:; 68:: 64:; 60:: 1871:. 1849:: 1822:. 1802:: 1796:4 1778:. 1754:. 1730:. 1706:. 1682:. 1658:. 1631:. 1621:5 1604:. 1582:: 1555:. 1531:. 1504:. 1480:. 1456:. 1429:. 1405:. 1381:. 1356:. 1329:. 1296:. 1276:. 1258:. 204:) 101:) 84::

Index

Aliases
C19orf44
MGI
1919504
HomoloGene
12975
GeneCards
C19orf44
OMA
C19orf44 - orthologs
Human
Chromosome 19 (human)
Chr.
Chromosome 19 (human)
Chromosome 19 (human)
Genomic location for C19orf44
Genomic location for C19orf44
Band
bp
bp
Mouse
Chromosome 8 (mouse)
Chr.
Chromosome 8 (mouse)
Genomic location for C19orf44
Genomic location for C19orf44
Band
bp
bp
RNA expression

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