Knowledge (XXG)

Compositional data

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The only information is given by the ratios between components, so the information of a composition is preserved under multiplication by any positive constant. Therefore, the sample space of compositional data can always be assumed to be a standard simplex, i.e.
3321:, a town may be a compositional data point in a sample of towns; a town in which 35% of the people are Christians, 55% are Muslims, 6% are Jews, and the remaining 4% are others would correspond to the quadruple . A data set would correspond to a list of towns. 2941: 1429: 1412: 2257: 3328:, a rock composed of different minerals may be a compositional data point in a sample of rocks; a rock of which 10% is the first mineral, 30% is the second, and the remaining 60% is the third would correspond to the triple . A 86: 3474:
Olea, Ricardo A.; Martín-Fernández, Josep A.; Craddock, William H. (2021). "Multivariate classification of the crude oil petroleum systems in southeast Texas, USA, using conventional and compositional analysis of biomarkers".
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The choice of denominator component is arbitrary, and could be any specified component. This transform is commonly used in chemistry with measurements such as pH. In addition, this is the transform most commonly used for
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A representation of a tree in terms of its orthogonal components. l represents an internal node, an element of the orthonormal basis. This is a precursor to using the tree as a scaffold for the ilr transform
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of clr transformed data. Another alternative is to construct log contrasts from a bifurcating tree. If we are given a bifurcating tree, we can construct a basis from the internal nodes in the tree.
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In Advances in Compositional Data Analysis—Festschrift in honor of Vera-Pawlowsky-Glahn, Filzmoser, P., Hron, K., Palarea-Albaladejo, J., Martín-Fernández, J.A., editors. Springer
361: 3372:, the proportions of people positively answering some different items can be expressed as percentages. As the total amount is identified as 100, the compositional vector of 2830: 392: 363:
represent values of different proportions. A, B, C, D and E are 5 different compositions within the simplex. A, B and C are all equivalent and D and E are equivalent.
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Egozcue, Juan Jose; Pawlowsky-Glahn, Vera; Mateu-Figueras, Gloria; Barcelo-Vidal, Carles (2003), "Isometric logratio transformations for compositional data analysis",
2190:. The alr transform is not an isometry, meaning that distances on transformed values will not be equivalent to distances on the original compositions in the simplex. 2984: 3248: 3221: 3007: 1699: 1639: 2417: 1597:{\displaystyle \langle x,y\rangle ={\frac {1}{2D}}\sum _{i=1}^{D}\sum _{j=1}^{D}\log {\frac {x_{i}}{x_{j}}}\log {\frac {y_{i}}{y_{j}}}\qquad \forall x,y\in S^{D}} 3288: 3268: 2437: 1953: 1731: 1109: 717: 2201: 294:{\displaystyle {\mathcal {S}}^{D}=\left\{\mathbf {x} =\in \mathbb {R} ^{D}\,\left|\,x_{i}>0,i=1,2,\dots ,D;\sum _{i=1}^{D}x_{i}=\kappa \right.\right\}.\ } 3087: 1713:
Since the Aitchison simplex forms a finite dimensional Hilbert space, it is possible to construct orthonormal bases in the simplex. Every composition
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are the respective number of tips in the corresponding subtrees shown in the figure. It can be shown that the resulting basis is orthonormal
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molar concentrations. These compositions can be translated into weight per cent multiplying each component by the appropriated constant.
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are quantitative descriptions of the parts of some whole, conveying relative information. Mathematically, compositional data is
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for short) can be represented by a real vector with positive components. The sample space of compositional data is a simplex:
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Egozcue, Juan Jose; Pawlowsky-Glahn, Vera (2005), "Groups of parts and their balances in compositional data analysis",
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that transform from the Aitchison simplex to real space. All of these transforms satisfy linearity and as given below
2936:{\displaystyle a={\frac {\sqrt {s}}{\sqrt {r(r+s)}}}\quad {\text{and}}\quad b={\frac {-{\sqrt {r}}}{\sqrt {s(r+s)}}}} 2512: 2266: 2063: 74:
defined compositional data to be proportions of some whole in 1982. In particular, a compositional data point (or
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parts. As they add to one, one probability can be suppressed and the composition is completely determined.
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of each component. As the sum of all concentrations is not determined, the whole composition of
3339:, data obtained are typically transformed to relative abundances, rendering them compositional. 371: 3619: 3522: 3502: 2951: 3653: 3611: 3584: 3546: 3434: 2440: 55:
on three variables graphically depicts the ratios of the three variables as positions in an
3226: 3199: 2992: 1648: 1612: 2393: 52: 1407:{\displaystyle \alpha \odot x=\left=C\qquad \forall x\in S^{D},\;\alpha \in \mathbb {R} } 3580: 3494: 3438: 3336: 3273: 3253: 2422: 2252:{\displaystyle \operatorname {clr} :S^{D}\rightarrow U,\quad U\subset \mathbb {R} ^{D}} 1938: 1716: 71: 2633: 696: 3676: 3558: 3390: 2451:
The isometric log ratio (ilr) transform is both an isomorphism and an isometry where
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The center log ratio (clr) transform is both an isomorphism and an isometry where
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with respect to the given basis. They are called isometric log-ratio coordinates
3343: 3184:{\displaystyle b_{i}={\sqrt {\frac {rs}{r+s}}}\log {\frac {g(x_{R})}{g(x_{S})}}} 1990: 1702: 306: 56: 3588: 3550: 3347: 3318: 17: 3299: 2622:
There are multiple ways to construct orthonormal bases, including using the
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Aitchison, John (1982). "The Statistical Analysis of Compositional Data".
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in several different ways. The following vector space structure is called
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where each element in the ilr transformed data is of the following form
3067:{\displaystyle \operatorname {ilr} (x)=\operatorname {clr} (x)\Psi ^{T}} 2498:{\displaystyle \operatorname {ilr} :S^{D}\rightarrow \mathbb {R} ^{D-1}} 2048:{\displaystyle \operatorname {alr} :S^{D}\rightarrow \mathbb {R} ^{D-1}} 3400: 3325: 29: 32:. Measurements involving probabilities, proportions, percentages, and 3658: 3638: 310:
An illustration of the Aitchison simplex. Here, there are 3 parts,
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Journal of the Royal Statistical Society. Series B (Methodological)
394:. In this context, normalization to the standard simplex is called 2632: 305: 3644:
Pawlowsky-Glahn, V.; Egozcue, J.J.; Tolosana-Delgado, R. (2007).
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would contain one such triple for each rock in a sample of rocks.
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are the set of values corresponding to the tips in the subtrees
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Why, and How, Should Geologists Use Compositional Data Analysis
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The additive log ratio (alr) transform is an isomorphism where
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van den Boogaart, K. Gerald; Tolosana-Delgado, Raimon (2013),
3501:, Monographs on statistics and applied probability, Springer, 1609:
Endowed with those operations, the Aitchison simplex forms a
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is built, the ilr transform can be calculated as follows
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Compositional data in three variables can be plotted via
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Each vector in the basis would be determined as follows
3606:; Egozcue, Juan Jose; Tolosana-Delgado, Raimon (2015), 3462: 1867:
forms an orthonormal basis in the simplex. The values
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The elements within each vector are given as follows
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probabilities can be considered as a composition of
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The inverse of this function is also known as the 1935:are the (orthonormal and Cartesian) coordinates of 3310:parts is needed and thus expressed as a vector of 3282: 3262: 3242: 3215: 3183: 3066: 3001: 2978: 2935: 2824: 2609: 2497: 2431: 2411: 2377: 2251: 2172: 2047: 1973: 1947: 1927: 1859: 1802: 1725: 1693: 1633: 1596: 1406: 1086: 711: 676: 427: 386: 355: 293: 2610:{\displaystyle \operatorname {ilr} (x)={\big }} 3646:"Lecture Notes on Compositional Data Analysis" 3499:The Statistical Analysis of Compositional Data 2602: 2536: 2378:{\displaystyle \operatorname {clr} (x)=\left} 2173:{\displaystyle \operatorname {alr} (x)=\left} 36:can all be thought of as compositional data. 8: 2597: 2572: 2560: 2541: 1445: 1433: 727:The simplex can be given the structure of a 3608:Modeling and Analysis of Compositional Data 3365:, for the classification of petroleum oils. 1928:{\displaystyle x_{i}^{*},i=1,2,\ldots ,D-1} 428:{\displaystyle \scriptstyle {\mathcal {C}}} 1392: 3657: 3275: 3255: 3234: 3228: 3207: 3201: 3169: 3148: 3135: 3104: 3095: 3089: 3058: 3019: 2994: 2953: 2903: 2897: 2885: 2855: 2847: 2815: 2809: 2785: 2775: 2751: 2741: 2717: 2707: 2683: 2681: 2657: 2651: 2601: 2600: 2585: 2554: 2535: 2534: 2514: 2483: 2479: 2478: 2468: 2456: 2424: 2395: 2348: 2342: 2305: 2299: 2268: 2243: 2239: 2238: 2215: 2203: 2157: 2141: 2135: 2112: 2102: 2096: 2065: 2033: 2029: 2028: 2018: 2006: 1960: 1940: 1883: 1878: 1872: 1845: 1826: 1820: 1794: 1781: 1776: 1766: 1755: 1743: 1718: 1676: 1657: 1650: 1614: 1588: 1560: 1550: 1544: 1530: 1520: 1514: 1502: 1491: 1481: 1470: 1451: 1431: 1400: 1399: 1383: 1360: 1355: 1336: 1331: 1304: 1299: 1289: 1278: 1267: 1262: 1256: 1238: 1233: 1223: 1212: 1201: 1196: 1190: 1178: 1173: 1163: 1152: 1141: 1136: 1130: 1111: 1078: 1049: 1039: 1020: 1010: 983: 973: 963: 952: 940: 930: 923: 905: 895: 885: 874: 862: 852: 845: 833: 823: 813: 802: 790: 780: 773: 754: 698: 654: 644: 633: 622: 616: 598: 588: 577: 566: 560: 548: 538: 527: 516: 510: 493: 474: 461: 448: 447: 445: 420: 416: 407: 406: 403: 373: 347: 334: 321: 315: 264: 254: 243: 194: 189: 183: 177: 173: 172: 159: 140: 127: 112: 98: 92: 91: 88: 693:is the number of parts (components) and 3417: 677:{\displaystyle {\mathcal {C}}=\left,\ } 1974:{\displaystyle (\operatorname {ilr} )} 3376:components can be defined using only 1860:{\displaystyle e_{1},\ldots ,e_{D-1}} 7: 3639:CoDaWeb – Compositional Data Website 3518:Analyzing Compositional Data with R 3302:, compositions can be expressed as 1989:There are three well-characterized 3463:Egozcue & Pawlowsky-Glahn 2005 3439:10.1111/j.2517-6161.1982.tb01195.x 3055: 2996: 1569: 1370: 1059: 739:and has the following operations: 14: 356:{\displaystyle x_{1},x_{2},x_{3}} 1100:Powering (scalar multiplication) 113: 2890: 2884: 2230: 2188:multinomial logistic regression 1568: 1369: 1058: 3175: 3162: 3154: 3141: 3051: 3045: 3033: 3027: 2927: 2915: 2878: 2866: 2819: 2816: 2678: 2669: 2624:Gram–Schmidt orthogonalization 2528: 2522: 2474: 2406: 2400: 2364: 2358: 2321: 2315: 2282: 2276: 2221: 2079: 2073: 2024: 1968: 1962: 1628: 1616: 1366: 1324: 1055: 1003: 743:Perturbation (vector addition) 706: 700: 499: 454: 421: 413: 165: 120: 1: 1733:can be decomposed as follows 3396:Response surface methodology 2628:singular-value decomposition 2447:Isometric logratio transform 1997:Additive log ratio transform 2825:{\displaystyle e_{\ell }=C} 3699: 3337:high throughput sequencing 2194:Center log ratio transform 1645:. The uniform composition 3589:10.1007/s11004-005-7381-9 3401:Applications of simplices 2419:is the geometric mean of 387:{\displaystyle \kappa =1} 3551:10.1023/A:1023818214614 2979:{\displaystyle k,r,s,t} 1641:-dimensional Euclidean 66:Simplicial sample space 3683:Statistical data types 3284: 3264: 3244: 3217: 3185: 3068: 3003: 2980: 2937: 2826: 2638: 2611: 2499: 2433: 2413: 2379: 2253: 2174: 2049: 1985:Linear transformations 1975: 1949: 1929: 1861: 1804: 1771: 1727: 1695: 1635: 1598: 1507: 1486: 1408: 1294: 1228: 1168: 1088: 968: 890: 818: 719:denotes a row vector. 713: 678: 649: 593: 543: 429: 388: 364: 357: 295: 259: 3650:Universitat de Girona 3616:10.1002/9781119003144 3604:Pawlowsky-Glahn, Vera 3285: 3265: 3245: 3243:{\displaystyle x_{S}} 3218: 3216:{\displaystyle x_{R}} 3186: 3069: 3004: 3002:{\displaystyle \Psi } 2981: 2938: 2827: 2636: 2612: 2500: 2434: 2414: 2380: 2254: 2175: 2050: 1976: 1950: 1930: 1862: 1805: 1751: 1728: 1696: 1694:{\displaystyle \left} 1636: 1634:{\displaystyle (D-1)} 1599: 1487: 1466: 1409: 1274: 1208: 1148: 1089: 948: 870: 798: 714: 679: 629: 573: 523: 430: 389: 358: 309: 296: 239: 26:represented by points 3568:Mathematical Geology 3538:Mathematical Geology 3304:molar concentrations 3274: 3254: 3227: 3200: 3088: 3018: 2993: 2952: 2846: 2650: 2513: 2455: 2423: 2412:{\displaystyle g(x)} 2394: 2267: 2202: 2064: 2055:. This is given by 2005: 1959: 1939: 1871: 1819: 1742: 1717: 1649: 1613: 1430: 1110: 753: 697: 444: 402: 372: 314: 87: 3581:2005MatGe..37..795E 1888: 1786: 1643:inner product space 1365: 1341: 1309: 1272: 1243: 1206: 1183: 1146: 3280: 3260: 3240: 3213: 3181: 3064: 2999: 2976: 2933: 2822: 2814: 2807: 2780: 2773: 2746: 2739: 2712: 2705: 2639: 2607: 2495: 2429: 2409: 2375: 2249: 2170: 2045: 1971: 1945: 1925: 1874: 1857: 1800: 1772: 1723: 1691: 1631: 1594: 1404: 1351: 1327: 1295: 1258: 1229: 1192: 1169: 1132: 1084: 733:Aitchison geometry 723:Aitchison geometry 709: 674: 425: 424: 398:and is denoted by 384: 365: 353: 291: 22:compositional data 3625:978-1-119-00314-4 3528:978-3-642-36809-7 3508:978-94-010-8324-9 3283:{\displaystyle S} 3263:{\displaystyle R} 3179: 3127: 3126: 2931: 2930: 2908: 2888: 2882: 2881: 2861: 2786: 2784: 2752: 2750: 2718: 2716: 2684: 2682: 2432:{\displaystyle x} 2368: 2325: 2163: 2118: 1948:{\displaystyle x} 1726:{\displaystyle x} 1709:Orthonormal bases 1684: 1665: 1566: 1536: 1464: 1311: 1245: 1185: 990: 912: 840: 737:Aitchison simplex 673: 661: 605: 555: 290: 3690: 3663: 3661: 3628: 3599: 3561: 3531: 3511: 3481: 3480: 3471: 3465: 3460: 3454: 3449: 3443: 3442: 3422: 3289: 3287: 3286: 3281: 3269: 3267: 3266: 3261: 3249: 3247: 3246: 3241: 3239: 3238: 3222: 3220: 3219: 3214: 3212: 3211: 3190: 3188: 3187: 3182: 3180: 3178: 3174: 3173: 3157: 3153: 3152: 3136: 3128: 3125: 3114: 3106: 3105: 3100: 3099: 3073: 3071: 3070: 3065: 3063: 3062: 3008: 3006: 3005: 3000: 2985: 2983: 2982: 2977: 2942: 2940: 2939: 2934: 2932: 2911: 2910: 2909: 2904: 2898: 2889: 2886: 2883: 2862: 2857: 2856: 2831: 2829: 2828: 2823: 2813: 2808: 2803: 2779: 2774: 2769: 2745: 2740: 2735: 2711: 2706: 2701: 2662: 2661: 2616: 2614: 2613: 2608: 2606: 2605: 2596: 2595: 2559: 2558: 2540: 2539: 2504: 2502: 2501: 2496: 2494: 2493: 2482: 2473: 2472: 2441:softmax function 2438: 2436: 2435: 2430: 2418: 2416: 2415: 2410: 2384: 2382: 2381: 2376: 2374: 2370: 2369: 2367: 2353: 2352: 2343: 2326: 2324: 2310: 2309: 2300: 2258: 2256: 2255: 2250: 2248: 2247: 2242: 2220: 2219: 2179: 2177: 2176: 2171: 2169: 2165: 2164: 2162: 2161: 2152: 2151: 2136: 2119: 2117: 2116: 2107: 2106: 2097: 2054: 2052: 2051: 2046: 2044: 2043: 2032: 2023: 2022: 1980: 1978: 1977: 1972: 1954: 1952: 1951: 1946: 1934: 1932: 1931: 1926: 1887: 1882: 1866: 1864: 1863: 1858: 1856: 1855: 1831: 1830: 1809: 1807: 1806: 1801: 1799: 1798: 1785: 1780: 1770: 1765: 1732: 1730: 1729: 1724: 1700: 1698: 1697: 1692: 1690: 1686: 1685: 1677: 1666: 1658: 1640: 1638: 1637: 1632: 1603: 1601: 1600: 1595: 1593: 1592: 1567: 1565: 1564: 1555: 1554: 1545: 1537: 1535: 1534: 1525: 1524: 1515: 1506: 1501: 1485: 1480: 1465: 1463: 1452: 1413: 1411: 1410: 1405: 1403: 1388: 1387: 1364: 1359: 1340: 1335: 1317: 1313: 1312: 1310: 1308: 1303: 1293: 1288: 1271: 1266: 1257: 1246: 1244: 1242: 1237: 1227: 1222: 1205: 1200: 1191: 1186: 1184: 1182: 1177: 1167: 1162: 1145: 1140: 1131: 1093: 1091: 1090: 1085: 1083: 1082: 1054: 1053: 1044: 1043: 1025: 1024: 1015: 1014: 996: 992: 991: 989: 988: 987: 978: 977: 967: 962: 946: 945: 944: 935: 934: 924: 913: 911: 910: 909: 900: 899: 889: 884: 868: 867: 866: 857: 856: 846: 841: 839: 838: 837: 828: 827: 817: 812: 796: 795: 794: 785: 784: 774: 718: 716: 715: 712:{\displaystyle } 710: 683: 681: 680: 675: 671: 667: 663: 662: 660: 659: 658: 648: 643: 627: 626: 617: 606: 604: 603: 602: 592: 587: 571: 570: 561: 556: 554: 553: 552: 542: 537: 521: 520: 511: 498: 497: 479: 478: 466: 465: 453: 452: 434: 432: 431: 426: 412: 411: 393: 391: 390: 385: 362: 360: 359: 354: 352: 351: 339: 338: 326: 325: 300: 298: 297: 292: 288: 284: 280: 279: 276: 269: 268: 258: 253: 199: 198: 182: 181: 176: 164: 163: 145: 144: 132: 131: 116: 103: 102: 97: 96: 3698: 3697: 3693: 3692: 3691: 3689: 3688: 3687: 3673: 3672: 3643: 3635: 3626: 3602: 3564: 3534: 3529: 3514: 3509: 3493: 3490: 3485: 3484: 3473: 3472: 3468: 3461: 3457: 3450: 3446: 3424: 3423: 3419: 3414: 3387: 3295: 3272: 3271: 3252: 3251: 3230: 3225: 3224: 3203: 3198: 3197: 3165: 3158: 3144: 3137: 3115: 3107: 3091: 3086: 3085: 3054: 3016: 3015: 2991: 2990: 2989:Once the basis 2950: 2949: 2899: 2844: 2843: 2787: 2753: 2719: 2685: 2653: 2648: 2647: 2581: 2550: 2511: 2510: 2477: 2464: 2453: 2452: 2449: 2421: 2420: 2392: 2391: 2354: 2344: 2311: 2301: 2292: 2288: 2265: 2264: 2237: 2211: 2200: 2199: 2196: 2153: 2137: 2108: 2098: 2089: 2085: 2062: 2061: 2027: 2014: 2003: 2002: 1999: 1987: 1957: 1956: 1937: 1936: 1869: 1868: 1841: 1822: 1817: 1816: 1790: 1740: 1739: 1715: 1714: 1711: 1656: 1652: 1647: 1646: 1611: 1610: 1584: 1556: 1546: 1526: 1516: 1456: 1428: 1427: 1379: 1273: 1207: 1147: 1129: 1125: 1108: 1107: 1074: 1045: 1035: 1016: 1006: 979: 969: 947: 936: 926: 925: 901: 891: 869: 858: 848: 847: 829: 819: 797: 786: 776: 775: 772: 768: 751: 750: 725: 695: 694: 650: 628: 618: 594: 572: 562: 544: 522: 512: 509: 505: 489: 470: 457: 442: 441: 400: 399: 370: 369: 343: 330: 317: 312: 311: 260: 190: 188: 184: 171: 155: 136: 123: 111: 107: 90: 85: 84: 68: 48:. The use of a 42: 12: 11: 5: 3696: 3694: 3686: 3685: 3675: 3674: 3671: 3670: 3664: 3641: 3634: 3633:External links 3631: 3630: 3629: 3624: 3600: 3575:(7): 795–828, 3562: 3545:(3): 279–300, 3532: 3527: 3512: 3507: 3489: 3486: 3483: 3482: 3466: 3455: 3452:Egozcue et al. 3444: 3433:(2): 139–177. 3416: 3415: 3413: 3410: 3409: 3408: 3403: 3398: 3393: 3386: 3383: 3382: 3381: 3366: 3359: 3340: 3333: 3322: 3315: 3294: 3291: 3279: 3259: 3237: 3233: 3210: 3206: 3194: 3193: 3192: 3191: 3177: 3172: 3168: 3164: 3161: 3156: 3151: 3147: 3143: 3140: 3134: 3131: 3124: 3121: 3118: 3113: 3110: 3103: 3098: 3094: 3077: 3076: 3075: 3074: 3061: 3057: 3053: 3050: 3047: 3044: 3041: 3038: 3035: 3032: 3029: 3026: 3023: 2998: 2975: 2972: 2969: 2966: 2963: 2960: 2957: 2946: 2945: 2944: 2943: 2929: 2926: 2923: 2920: 2917: 2914: 2907: 2902: 2896: 2893: 2880: 2877: 2874: 2871: 2868: 2865: 2860: 2854: 2851: 2835: 2834: 2833: 2832: 2821: 2818: 2812: 2806: 2802: 2799: 2796: 2793: 2790: 2783: 2778: 2772: 2768: 2765: 2762: 2759: 2756: 2749: 2744: 2738: 2734: 2731: 2728: 2725: 2722: 2715: 2710: 2704: 2700: 2697: 2694: 2691: 2688: 2680: 2677: 2674: 2671: 2668: 2665: 2660: 2656: 2620: 2619: 2618: 2617: 2604: 2599: 2594: 2591: 2588: 2584: 2580: 2577: 2574: 2571: 2568: 2565: 2562: 2557: 2553: 2549: 2546: 2543: 2538: 2533: 2530: 2527: 2524: 2521: 2518: 2492: 2489: 2486: 2481: 2476: 2471: 2467: 2463: 2460: 2448: 2445: 2428: 2408: 2405: 2402: 2399: 2388: 2387: 2386: 2385: 2373: 2366: 2363: 2360: 2357: 2351: 2347: 2341: 2338: 2335: 2332: 2329: 2323: 2320: 2317: 2314: 2308: 2304: 2298: 2295: 2291: 2287: 2284: 2281: 2278: 2275: 2272: 2246: 2241: 2236: 2233: 2229: 2226: 2223: 2218: 2214: 2210: 2207: 2195: 2192: 2183: 2182: 2181: 2180: 2168: 2160: 2156: 2150: 2147: 2144: 2140: 2134: 2131: 2128: 2125: 2122: 2115: 2111: 2105: 2101: 2095: 2092: 2088: 2084: 2081: 2078: 2075: 2072: 2069: 2042: 2039: 2036: 2031: 2026: 2021: 2017: 2013: 2010: 1998: 1995: 1986: 1983: 1970: 1967: 1964: 1944: 1924: 1921: 1918: 1915: 1912: 1909: 1906: 1903: 1900: 1897: 1894: 1891: 1886: 1881: 1877: 1854: 1851: 1848: 1844: 1840: 1837: 1834: 1829: 1825: 1813: 1812: 1811: 1810: 1797: 1793: 1789: 1784: 1779: 1775: 1769: 1764: 1761: 1758: 1754: 1750: 1747: 1722: 1710: 1707: 1689: 1683: 1680: 1675: 1672: 1669: 1664: 1661: 1655: 1630: 1627: 1624: 1621: 1618: 1607: 1606: 1605: 1604: 1591: 1587: 1583: 1580: 1577: 1574: 1571: 1563: 1559: 1553: 1549: 1543: 1540: 1533: 1529: 1523: 1519: 1513: 1510: 1505: 1500: 1497: 1494: 1490: 1484: 1479: 1476: 1473: 1469: 1462: 1459: 1455: 1450: 1447: 1444: 1441: 1438: 1435: 1422: 1421: 1417: 1416: 1415: 1414: 1402: 1398: 1395: 1391: 1386: 1382: 1378: 1375: 1372: 1368: 1363: 1358: 1354: 1350: 1347: 1344: 1339: 1334: 1330: 1326: 1323: 1320: 1316: 1307: 1302: 1298: 1292: 1287: 1284: 1281: 1277: 1270: 1265: 1261: 1255: 1252: 1249: 1241: 1236: 1232: 1226: 1221: 1218: 1215: 1211: 1204: 1199: 1195: 1189: 1181: 1176: 1172: 1166: 1161: 1158: 1155: 1151: 1144: 1139: 1135: 1128: 1124: 1121: 1118: 1115: 1102: 1101: 1097: 1096: 1095: 1094: 1081: 1077: 1073: 1070: 1067: 1064: 1061: 1057: 1052: 1048: 1042: 1038: 1034: 1031: 1028: 1023: 1019: 1013: 1009: 1005: 1002: 999: 995: 986: 982: 976: 972: 966: 961: 958: 955: 951: 943: 939: 933: 929: 922: 919: 916: 908: 904: 898: 894: 888: 883: 880: 877: 873: 865: 861: 855: 851: 844: 836: 832: 826: 822: 816: 811: 808: 805: 801: 793: 789: 783: 779: 771: 767: 764: 761: 758: 745: 744: 724: 721: 708: 705: 702: 687: 686: 685: 684: 670: 666: 657: 653: 647: 642: 639: 636: 632: 625: 621: 615: 612: 609: 601: 597: 591: 586: 583: 580: 576: 569: 565: 559: 551: 547: 541: 536: 533: 530: 526: 519: 515: 508: 504: 501: 496: 492: 488: 485: 482: 477: 473: 469: 464: 460: 456: 451: 423: 419: 415: 410: 383: 380: 377: 350: 346: 342: 337: 333: 329: 324: 320: 304: 303: 302: 301: 287: 283: 278: 275: 272: 267: 263: 257: 252: 249: 246: 242: 238: 235: 232: 229: 226: 223: 220: 217: 214: 211: 208: 205: 202: 197: 193: 187: 180: 175: 170: 167: 162: 158: 154: 151: 148: 143: 139: 135: 130: 126: 122: 119: 115: 110: 106: 101: 95: 72:John Aitchison 67: 64: 41: 38: 13: 10: 9: 6: 4: 3: 2: 3695: 3684: 3681: 3680: 3678: 3668: 3665: 3660: 3655: 3651: 3647: 3642: 3640: 3637: 3636: 3632: 3627: 3621: 3617: 3613: 3609: 3605: 3601: 3598: 3594: 3590: 3586: 3582: 3578: 3574: 3570: 3569: 3563: 3560: 3556: 3552: 3548: 3544: 3540: 3539: 3533: 3530: 3524: 3520: 3519: 3513: 3510: 3504: 3500: 3496: 3495:Aitchison, J. 3492: 3491: 3487: 3478: 3470: 3467: 3464: 3459: 3456: 3453: 3448: 3445: 3440: 3436: 3432: 3428: 3421: 3418: 3411: 3407: 3404: 3402: 3399: 3397: 3394: 3392: 3391:Mixture model 3389: 3388: 3384: 3379: 3375: 3371: 3367: 3364: 3360: 3357: 3353: 3349: 3345: 3341: 3338: 3334: 3331: 3327: 3323: 3320: 3316: 3313: 3309: 3305: 3301: 3297: 3296: 3292: 3290: 3277: 3257: 3235: 3231: 3208: 3204: 3170: 3166: 3159: 3149: 3145: 3138: 3132: 3129: 3122: 3119: 3116: 3111: 3108: 3101: 3096: 3092: 3084: 3083: 3082: 3081: 3080: 3059: 3048: 3042: 3039: 3036: 3030: 3024: 3021: 3014: 3013: 3012: 3011: 3010: 2987: 2973: 2970: 2967: 2964: 2961: 2958: 2955: 2924: 2921: 2918: 2912: 2905: 2900: 2894: 2891: 2875: 2872: 2869: 2863: 2858: 2852: 2849: 2842: 2841: 2840: 2839: 2838: 2810: 2804: 2800: 2797: 2794: 2791: 2788: 2781: 2776: 2770: 2766: 2763: 2760: 2757: 2754: 2747: 2742: 2736: 2732: 2729: 2726: 2723: 2720: 2713: 2708: 2702: 2698: 2695: 2692: 2689: 2686: 2675: 2672: 2666: 2663: 2658: 2654: 2646: 2645: 2644: 2643: 2642: 2635: 2631: 2629: 2625: 2592: 2589: 2586: 2582: 2578: 2575: 2569: 2566: 2563: 2555: 2551: 2547: 2544: 2531: 2525: 2519: 2516: 2509: 2508: 2507: 2506: 2505: 2490: 2487: 2484: 2469: 2465: 2461: 2458: 2446: 2444: 2442: 2426: 2403: 2397: 2371: 2361: 2355: 2349: 2345: 2339: 2336: 2333: 2330: 2327: 2318: 2312: 2306: 2302: 2296: 2293: 2289: 2285: 2279: 2273: 2270: 2263: 2262: 2261: 2260: 2259: 2244: 2234: 2231: 2227: 2224: 2216: 2212: 2208: 2205: 2193: 2191: 2189: 2166: 2158: 2154: 2148: 2145: 2142: 2138: 2132: 2129: 2126: 2123: 2120: 2113: 2109: 2103: 2099: 2093: 2090: 2086: 2082: 2076: 2070: 2067: 2060: 2059: 2058: 2057: 2056: 2040: 2037: 2034: 2019: 2015: 2011: 2008: 1996: 1994: 1992: 1984: 1982: 1965: 1942: 1922: 1919: 1916: 1913: 1910: 1907: 1904: 1901: 1898: 1895: 1892: 1889: 1884: 1879: 1875: 1852: 1849: 1846: 1842: 1838: 1835: 1832: 1827: 1823: 1795: 1791: 1787: 1782: 1777: 1773: 1767: 1762: 1759: 1756: 1752: 1748: 1745: 1738: 1737: 1736: 1735: 1734: 1720: 1708: 1706: 1704: 1687: 1681: 1678: 1673: 1670: 1667: 1662: 1659: 1653: 1644: 1625: 1622: 1619: 1589: 1585: 1581: 1578: 1575: 1572: 1561: 1557: 1551: 1547: 1541: 1538: 1531: 1527: 1521: 1517: 1511: 1508: 1503: 1498: 1495: 1492: 1488: 1482: 1477: 1474: 1471: 1467: 1460: 1457: 1453: 1448: 1442: 1439: 1436: 1426: 1425: 1424: 1423: 1420:Inner product 1419: 1418: 1396: 1393: 1389: 1384: 1380: 1376: 1373: 1361: 1356: 1352: 1348: 1345: 1342: 1337: 1332: 1328: 1321: 1318: 1314: 1305: 1300: 1296: 1290: 1285: 1282: 1279: 1275: 1268: 1263: 1259: 1253: 1250: 1247: 1239: 1234: 1230: 1224: 1219: 1216: 1213: 1209: 1202: 1197: 1193: 1187: 1179: 1174: 1170: 1164: 1159: 1156: 1153: 1149: 1142: 1137: 1133: 1126: 1122: 1119: 1116: 1113: 1106: 1105: 1104: 1103: 1099: 1098: 1079: 1075: 1071: 1068: 1065: 1062: 1050: 1046: 1040: 1036: 1032: 1029: 1026: 1021: 1017: 1011: 1007: 1000: 997: 993: 984: 980: 974: 970: 964: 959: 956: 953: 949: 941: 937: 931: 927: 920: 917: 914: 906: 902: 896: 892: 886: 881: 878: 875: 871: 863: 859: 853: 849: 842: 834: 830: 824: 820: 814: 809: 806: 803: 799: 791: 787: 781: 777: 769: 765: 762: 759: 756: 749: 748: 747: 746: 742: 741: 740: 738: 734: 730: 722: 720: 703: 692: 668: 664: 655: 651: 645: 640: 637: 634: 630: 623: 619: 613: 610: 607: 599: 595: 589: 584: 581: 578: 574: 567: 563: 557: 549: 545: 539: 534: 531: 528: 524: 517: 513: 506: 502: 494: 490: 486: 483: 480: 475: 471: 467: 462: 458: 440: 439: 438: 437: 436: 417: 397: 381: 378: 375: 348: 344: 340: 335: 331: 327: 322: 318: 308: 285: 281: 273: 270: 265: 261: 255: 250: 247: 244: 240: 236: 233: 230: 227: 224: 221: 218: 215: 212: 209: 206: 203: 200: 195: 191: 185: 178: 168: 160: 156: 152: 149: 146: 141: 137: 133: 128: 124: 117: 108: 104: 99: 83: 82: 81: 80: 79: 77: 73: 65: 63: 61: 58: 54: 51: 47: 46:ternary plots 39: 37: 35: 31: 27: 23: 19: 3649: 3607: 3572: 3566: 3542: 3536: 3521:, Springer, 3517: 3498: 3476: 3469: 3458: 3447: 3430: 3426: 3420: 3406:Ternary plot 3377: 3373: 3363:chemometrics 3355: 3351: 3311: 3307: 3195: 3078: 2988: 2947: 2836: 2640: 2621: 2450: 2389: 2197: 2184: 2000: 1991:isomorphisms 1988: 1814: 1712: 1608: 736: 732: 729:vector space 726: 690: 688: 395: 366: 75: 70:In general, 69: 43: 40:Ternary plot 21: 15: 3344:probability 1703:zero vector 76:composition 57:equilateral 50:barycentric 3669:(wikibook) 3488:References 3479:: 303−327. 3348:statistics 3319:demography 18:statistics 3659:10256/297 3610:, Wiley, 3559:122844634 3497:(2011) , 3300:chemistry 3133:⁡ 3056:Ψ 3043:⁡ 3025:⁡ 2997:Ψ 2901:− 2805:⏟ 2795:… 2771:⏟ 2761:… 2737:⏟ 2727:… 2703:⏟ 2693:… 2676:⁡ 2659:ℓ 2598:⟩ 2590:− 2573:⟨ 2567:… 2561:⟩ 2542:⟨ 2520:⁡ 2488:− 2475:→ 2340:⁡ 2331:⋯ 2297:⁡ 2274:⁡ 2235:⊂ 2222:→ 2146:− 2133:⁡ 2124:⋯ 2094:⁡ 2071:⁡ 2038:− 2025:→ 1920:− 1911:… 1885:∗ 1850:− 1836:… 1788:⊙ 1783:∗ 1753:⨁ 1671:… 1623:− 1582:∈ 1570:∀ 1542:⁡ 1512:⁡ 1489:∑ 1468:∑ 1446:⟩ 1434:⟨ 1397:∈ 1394:α 1377:∈ 1371:∀ 1362:α 1346:… 1338:α 1306:α 1276:∑ 1269:α 1251:… 1240:α 1210:∑ 1203:α 1180:α 1150:∑ 1143:α 1117:⊙ 1114:α 1072:∈ 1060:∀ 1030:… 950:∑ 918:… 872:∑ 800:∑ 760:⊕ 704:⋅ 631:∑ 611:… 575:∑ 525:∑ 484:… 418:⋅ 376:κ 274:κ 241:∑ 228:… 169:∈ 150:… 3677:Category 3597:53061345 3385:See also 3330:data set 3293:Examples 60:triangle 3577:Bibcode 3326:geology 1701:is the 735:or the 396:closure 30:simplex 3622:  3595:  3557:  3525:  3505:  3370:survey 3196:where 2948:where 2390:Where 1815:where 689:where 672:  289:  3593:S2CID 3555:S2CID 3412:Notes 3368:In a 28:on a 3620:ISBN 3523:ISBN 3503:ISBN 3346:and 3270:and 3223:and 201:> 53:plot 3654:hdl 3612:doi 3585:doi 3547:doi 3435:doi 3361:In 3342:In 3335:In 3324:In 3317:In 3298:In 3130:log 3040:clr 3022:ilr 2887:and 2673:exp 2626:or 2517:ilr 2459:ilr 2337:log 2294:log 2271:clr 2206:clr 2130:log 2091:log 2068:alr 2009:alr 1966:ilr 1539:log 1509:log 34:ppm 16:In 3679:: 3652:. 3648:. 3618:, 3591:, 3583:, 3573:37 3571:, 3553:, 3543:35 3541:, 3431:44 3429:. 2443:. 1981:. 1705:. 435:: 62:. 20:, 3662:. 3656:: 3614:: 3587:: 3579:: 3549:: 3441:. 3437:: 3378:D 3374:D 3356:D 3352:D 3312:D 3308:D 3278:S 3258:R 3236:S 3232:x 3209:R 3205:x 3176:) 3171:S 3167:x 3163:( 3160:g 3155:) 3150:R 3146:x 3142:( 3139:g 3123:s 3120:+ 3117:r 3112:s 3109:r 3102:= 3097:i 3093:b 3060:T 3052:) 3049:x 3046:( 3037:= 3034:) 3031:x 3028:( 2974:t 2971:, 2968:s 2965:, 2962:r 2959:, 2956:k 2928:) 2925:s 2922:+ 2919:r 2916:( 2913:s 2906:r 2895:= 2892:b 2879:) 2876:s 2873:+ 2870:r 2867:( 2864:r 2859:s 2853:= 2850:a 2820:] 2817:) 2811:t 2801:0 2798:, 2792:, 2789:0 2782:, 2777:s 2767:b 2764:, 2758:, 2755:b 2748:, 2743:r 2733:a 2730:, 2724:, 2721:a 2714:, 2709:k 2699:0 2696:, 2690:, 2687:0 2679:( 2670:[ 2667:C 2664:= 2655:e 2603:] 2593:1 2587:D 2583:e 2579:, 2576:x 2570:, 2564:, 2556:1 2552:e 2548:, 2545:x 2537:[ 2532:= 2529:) 2526:x 2523:( 2491:1 2485:D 2480:R 2470:D 2466:S 2462:: 2427:x 2407:) 2404:x 2401:( 2398:g 2372:] 2365:) 2362:x 2359:( 2356:g 2350:D 2346:x 2334:, 2328:, 2322:) 2319:x 2316:( 2313:g 2307:1 2303:x 2290:[ 2286:= 2283:) 2280:x 2277:( 2245:D 2240:R 2232:U 2228:, 2225:U 2217:D 2213:S 2209:: 2167:] 2159:D 2155:x 2149:1 2143:D 2139:x 2127:, 2121:, 2114:D 2110:x 2104:1 2100:x 2087:[ 2083:= 2080:) 2077:x 2074:( 2041:1 2035:D 2030:R 2020:D 2016:S 2012:: 1969:) 1963:( 1943:x 1923:1 1917:D 1914:, 1908:, 1905:2 1902:, 1899:1 1896:= 1893:i 1890:, 1880:i 1876:x 1853:1 1847:D 1843:e 1839:, 1833:, 1828:1 1824:e 1796:i 1792:e 1778:i 1774:x 1768:D 1763:1 1760:= 1757:i 1749:= 1746:x 1721:x 1688:] 1682:D 1679:1 1674:, 1668:, 1663:D 1660:1 1654:[ 1629:) 1626:1 1620:D 1617:( 1590:D 1586:S 1579:y 1576:, 1573:x 1562:j 1558:y 1552:i 1548:y 1532:j 1528:x 1522:i 1518:x 1504:D 1499:1 1496:= 1493:j 1483:D 1478:1 1475:= 1472:i 1461:D 1458:2 1454:1 1449:= 1443:y 1440:, 1437:x 1401:R 1390:, 1385:D 1381:S 1374:x 1367:] 1357:D 1353:x 1349:, 1343:, 1333:1 1329:x 1325:[ 1322:C 1319:= 1315:] 1301:i 1297:x 1291:D 1286:1 1283:= 1280:i 1264:D 1260:x 1254:, 1248:, 1235:i 1231:x 1225:D 1220:1 1217:= 1214:i 1198:2 1194:x 1188:, 1175:i 1171:x 1165:D 1160:1 1157:= 1154:i 1138:1 1134:x 1127:[ 1123:= 1120:x 1080:D 1076:S 1069:y 1066:, 1063:x 1056:] 1051:D 1047:y 1041:D 1037:x 1033:, 1027:, 1022:1 1018:y 1012:1 1008:x 1004:[ 1001:C 998:= 994:] 985:i 981:y 975:i 971:x 965:D 960:1 957:= 954:i 942:D 938:y 932:D 928:x 921:, 915:, 907:i 903:y 897:i 893:x 887:D 882:1 879:= 876:i 864:2 860:y 854:2 850:x 843:, 835:i 831:y 825:i 821:x 815:D 810:1 807:= 804:i 792:1 788:y 782:1 778:x 770:[ 766:= 763:y 757:x 707:] 701:[ 691:D 669:, 665:] 656:i 652:x 646:D 641:1 638:= 635:i 624:D 620:x 614:, 608:, 600:i 596:x 590:D 585:1 582:= 579:i 568:2 564:x 558:, 550:i 546:x 540:D 535:1 532:= 529:i 518:1 514:x 507:[ 503:= 500:] 495:D 491:x 487:, 481:, 476:2 472:x 468:, 463:1 459:x 455:[ 450:C 422:] 414:[ 409:C 382:1 379:= 349:3 345:x 341:, 336:2 332:x 328:, 323:1 319:x 286:. 282:} 271:= 266:i 262:x 256:D 251:1 248:= 245:i 237:; 234:D 231:, 225:, 222:2 219:, 216:1 213:= 210:i 207:, 204:0 196:i 192:x 186:| 179:D 174:R 166:] 161:D 157:x 153:, 147:, 142:2 138:x 134:, 129:1 125:x 121:[ 118:= 114:x 109:{ 105:= 100:D 94:S

Index

statistics
represented by points
simplex
ppm
ternary plots
barycentric
plot
equilateral
triangle
John Aitchison

vector space
inner product space
zero vector
isomorphisms
multinomial logistic regression
softmax function
Gram–Schmidt orthogonalization
singular-value decomposition

chemistry
molar concentrations
demography
geology
data set
high throughput sequencing
probability
statistics
chemometrics
survey

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