Knowledge (XXG)

Exon skipping

Source đź“ť

129:. This means that, out of the 79 exons that code for dystrophin, one or several in the middle may be removed, without affecting the exons that follow the deletion. This allows for a shorter-than-normal dystrophin protein that maintains a degree of functionality. In Duchenne muscular dystrophy, the genetic mutation is out-of-frame. Out-of-frame mutations cause a premature stop in protein generation - the ribosome is unable to “read” the RNA past the point of initial error - leading to a severely shortened and completely non-functional dystrophin protein. 84:(AON). An antisense oligonucleotide is a synthesized short nucleic acid polymer, typically fifty or fewer base pairs in length that will bind to the mutation site in the pre-messenger RNA, to induce exon skipping. The AON binds to the mutated exon, so that when the gene is then translated from the mature mRNA, it is “skipped” over, thus restoring the disrupted reading frame. This allows for the generation of an internally deleted, but largely functional protein. 243:, usually from blood samples, can be used to determine the precise nature and location of the DMD mutation in the dystrophin gene. It is known that these mutations cluster in areas known as the 'hot spot' regions — primarily in exons 45–53 and to a lesser extent exons 2–20. As the majority of DMD mutations occur in these 'hot spot' regions, a treatment which causes these exons to be skipped could be used to treat up to 50% of DMD patients. 118:
that do not upset the open reading frame, lead to a dystrophin protein that is internally deleted and shorter than normal, but still partially functional. Such mutations are associated with the much milder Becker muscular dystrophy. Mildly affected BMD patients carrying deletions that involve over two thirds of the central rod domain have been described, suggesting that this domain is largely dispensable.
593: 553: 121:
Dystrophin can maintain a large degree of functionality so long as the essential terminal domains are unaffected, and exon skipping only occurs within the central rod domain. Given these parameters, exon skipping can be used to restore an open reading frame by inducing a deletion of one or several
117:
within dystrophin create prematurely truncated proteins that are unable to perform their job. Such mutations lead to muscle fiber damage, replacement of muscle tissue by fat and fibrotic tissue, and premature death typically occurring in the early twenties of DMD patients. Comparatively, mutations
112:
In the case of Duchenne muscular dystrophy, the protein that becomes compromised is dystrophin. The dystrophin protein has two essential functional domains that flank a central rod domain consisting of repetitive and partially dispensable segments. Dystrophin’s function is to maintain muscle fiber
65:. Exons are the sections of DNA that contain the instruction set for generating a protein; they are interspersed with non-coding regions called introns. The introns are later removed before the protein is made, leaving only the coding exon regions. 87:
Some mutations require exon skipping at multiple sites, sometimes adjacent to one another, in order to restore the reading frame. Multiple exon skipping has successfully been carried out using a combination of AONs that target multiple exons.
538: 72:
when introns are being removed to form mature-mRNA that consists solely of exons. Starting in the late 1990s, scientists realized they could take advantage of this naturally occurring cellular splicing to downplay genetic
104:
is prematurely truncated, which leads to a non-functioning protein. Successful treatment by way of exon skipping could lead to a mostly functional dystrophin protein, and create a phenotype similar to the less severe
132:
The goal of exon skipping is to manipulate the splicing pattern so that an out-of-frame mutation becomes an in-frame mutation, thus changing a severe DMD mutation into a less harmful in-frame BMD mutation.
455: 526: 570: 452: 576: 532: 97: 113:
stability during contraction by linking the extra cellular matrix to the cytoskeleton. Mutations that disrupt the
153: 106: 81: 399:
Aartsma-Rus A, Fokkema I, Verschuuren J, Ginjaar I, van Deutekom J, van Ommen GJ, den Dunnen JT (March 2009).
275: 527:"FDA grants accelerated approval to first targeted treatment for rare Duchenne muscular dystrophy mutation" 160:(Viltepso), targeting dystrophin exon 53 was approved for medical use in the United States in August 2020. 152:(Vyondys 53) (targeting dystrophin exon 53), was approved in the United States in December 2019. A third 401:"Theoretic applicability of antisense-mediated exon skipping for Duchenne muscular dystrophy mutations" 610:
van Deutekom JC, van Ommen GJ (October 2003). "Advances in Duchenne muscular dystrophy gene therapy".
306: 145: 35:) of genetic code, leading to a truncated but still functional protein despite the genetic mutation. 635: 430: 332: 114: 122:
exons within the central rod domain, and thus converting a DMD phenotype into a BMD phenotype.
479:"Antisense-mediated exon skipping: a versatile tool with therapeutic and research applications" 293:
Goyenvalle A, Vulin A, Fougerousse F, Leturcq F, Kaplan JC, Garcia L, Danos O (December 2004).
658: 627: 508: 422: 376: 324: 252: 126: 20: 619: 498: 490: 412: 366: 314: 459: 240: 310: 503: 478: 16:
Form of RNA splicing used to cause cells to "skip" over faulty sections of genetic code
652: 639: 597: 557: 50: 434: 336: 44: 28: 157: 571:"FDA Approves Targeted Treatment for Rare Duchenne Muscular Dystrophy Mutation" 355:"The influence of antisense oligonucleotide length on dystrophin exon skipping" 149: 141: 137: 101: 319: 294: 74: 631: 512: 426: 380: 328: 371: 354: 148:
targeting exon 51 of human dystrophin. Another exon-skipping Morpholino,
69: 57:
are the genetic instructions for creating a protein, and are composed of
494: 417: 400: 353:
Harding PL, Fall AM, Honeyman K, Fletcher S, Wilton SD (January 2007).
295:"Rescue of dystrophic muscle through U7 snRNA-mediated exon skipping" 58: 623: 462:
Muscular Dystrophy Campaign. N.p., 11 July 2009. Web. 05 Nov. 2012.
125:
The genetic mutation that leads to Becker muscular dystrophy is an
31:
used to cause cells to “skip” over faulty or misaligned sections (
596:
This article incorporates text from this source, which is in the
556:
This article incorporates text from this source, which is in the
62: 54: 32: 96:
Exon skipping is being heavily researched for the treatment of
136:
One exon-skipping drug was approved in 2016, by the US FDA:
80:
The mechanism behind exon skipping is a mutation specific
276:"Exon Skipping in DMD: What Is It and Whom Can It Help?" 92:As a treatment for Duchenne muscular dystrophy 8: 477:Aartsma-Rus A, van Ommen GJ (October 2007). 453:What Is Exon Skipping and How Does It Work? 394: 392: 390: 502: 472: 470: 468: 416: 370: 318: 162: 263: 448: 446: 444: 348: 346: 269: 267: 541:from the original on 13 December 2019 164:exon skipping drugs approved for DMD 49:Exon skipping is used to restore the 7: 537:(Press release). 12 December 2019. 100:(DMD), where the muscular protein 14: 591: 551: 581:(Press release). 12 August 2020 1: 68:Splicing naturally occurs in 577:Food and Drug Administration 533:Food and Drug Administration 98:Duchenne muscular dystrophy 675: 42: 274:Wahl M (1 October 2011). 154:antisense oligonucleotide 107:Becker muscular dystrophy 82:antisense oligonucleotide 612:Nature Reviews. Genetics 77:into less harmful ones. 320:10.1126/science.1104297 372:10.1038/sj.mt.6300006 280:Quest Magazine Online 146:Sarepta Therapeutics 311:2004Sci...306.1796G 165: 495:10.1261/rna.653607 458:2014-12-08 at the 418:10.1002/humu.20918 163: 115:open reading frame 359:Molecular Therapy 253:Antisense therapy 238: 237: 127:in-frame deletion 21:molecular biology 666: 644: 643: 607: 601: 595: 594: 590: 588: 586: 567: 561: 555: 554: 550: 548: 546: 523: 517: 516: 506: 474: 463: 450: 439: 438: 420: 396: 385: 384: 374: 350: 341: 340: 322: 305:(5702): 1796–9. 290: 284: 283: 271: 178:UD FDA approval 166: 674: 673: 669: 668: 667: 665: 664: 663: 649: 648: 647: 624:10.1038/nrg1180 609: 608: 604: 592: 584: 582: 569: 568: 564: 552: 544: 542: 525: 524: 520: 489:(10): 1609–24. 476: 475: 466: 460:Wayback Machine 451: 442: 398: 397: 388: 352: 351: 344: 292: 291: 287: 273: 272: 265: 261: 249: 241:Genetic testing 192:September 2016 140:(ExonDys51), a 94: 53:within a gene. 47: 41: 17: 12: 11: 5: 672: 670: 662: 661: 651: 650: 646: 645: 618:(10): 774–83. 602: 562: 518: 464: 440: 405:Human Mutation 386: 342: 285: 262: 260: 257: 256: 255: 248: 245: 236: 235: 232: 229: 226: 222: 221: 218: 215: 212: 208: 207: 206:December 2019 204: 201: 198: 194: 193: 190: 187: 184: 180: 179: 176: 173: 170: 93: 90: 40: 37: 15: 13: 10: 9: 6: 4: 3: 2: 671: 660: 657: 656: 654: 641: 637: 633: 629: 625: 621: 617: 613: 606: 603: 599: 598:public domain 580: 578: 572: 566: 563: 559: 558:public domain 540: 536: 534: 528: 522: 519: 514: 510: 505: 500: 496: 492: 488: 484: 480: 473: 471: 469: 465: 461: 457: 454: 449: 447: 445: 441: 436: 432: 428: 424: 419: 414: 410: 406: 402: 395: 393: 391: 387: 382: 378: 373: 368: 365:(1): 157–66. 364: 360: 356: 349: 347: 343: 338: 334: 330: 326: 321: 316: 312: 308: 304: 300: 296: 289: 286: 281: 277: 270: 268: 264: 258: 254: 251: 250: 246: 244: 242: 233: 230: 227: 224: 223: 219: 216: 213: 210: 209: 205: 202: 199: 196: 195: 191: 188: 185: 182: 181: 177: 174: 171: 168: 167: 161: 159: 155: 151: 147: 143: 139: 134: 130: 128: 123: 119: 116: 110: 108: 103: 99: 91: 89: 85: 83: 78: 76: 71: 66: 64: 60: 56: 52: 51:reading frame 46: 38: 36: 34: 30: 27:is a form of 26: 25:exon skipping 22: 615: 611: 605: 583:. Retrieved 574: 565: 543:. Retrieved 530: 521: 486: 482: 411:(3): 293–9. 408: 404: 362: 358: 302: 298: 288: 279: 239: 220:August 2020 135: 131: 124: 120: 111: 95: 86: 79: 67: 48: 45:RNA splicing 29:RNA splicing 24: 18: 545:12 December 234:March 2021 211:viltolarsen 158:viltolarsen 144:oligo from 259:References 225:casimerson 197:golodirsen 183:eteplirsen 150:golodirsen 142:Morpholino 138:eteplirsen 102:dystrophin 43:See also: 640:207859539 585:12 August 217:NS Pharma 75:mutations 39:Mechanism 659:Genetics 653:Category 632:14526374 539:Archived 513:17684229 456:Archived 435:45979175 427:19156838 381:17164787 329:15528407 247:See also 70:pre-mRNA 504:1986821 337:9359783 307:Bibcode 299:Science 231:Sarepta 203:Sarepta 189:Sarepta 175:company 109:(BMD). 59:introns 638:  630:  511:  501:  433:  425:  379:  335:  327:  636:S2CID 579:(FDA) 575:U.S. 535:(FDA) 531:U.S. 431:S2CID 333:S2CID 63:exons 55:Genes 33:exons 628:PMID 587:2020 547:2019 509:PMID 423:PMID 377:PMID 325:PMID 172:exon 169:drug 61:and 620:doi 499:PMC 491:doi 483:RNA 413:doi 367:doi 315:doi 303:306 19:In 655:: 634:. 626:. 614:. 573:. 529:. 507:. 497:. 487:13 485:. 481:. 467:^ 443:^ 429:. 421:. 409:30 407:. 403:. 389:^ 375:. 363:15 361:. 357:. 345:^ 331:. 323:. 313:. 301:. 297:. 278:. 266:^ 228:45 214:53 200:53 186:51 156:, 23:, 642:. 622:: 616:4 600:. 589:. 560:. 549:. 515:. 493:: 437:. 415:: 383:. 369:: 339:. 317:: 309:: 282:.

Index

molecular biology
RNA splicing
exons
RNA splicing
reading frame
Genes
introns
exons
pre-mRNA
mutations
antisense oligonucleotide
Duchenne muscular dystrophy
dystrophin
Becker muscular dystrophy
open reading frame
in-frame deletion
eteplirsen
Morpholino
Sarepta Therapeutics
golodirsen
antisense oligonucleotide
viltolarsen
Genetic testing
Antisense therapy


"Exon Skipping in DMD: What Is It and Whom Can It Help?"
"Rescue of dystrophic muscle through U7 snRNA-mediated exon skipping"
Bibcode
2004Sci...306.1796G

Text is available under the Creative Commons Attribution-ShareAlike License. Additional terms may apply.

↑