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Bacteriophage MS2

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542: 538:", blocking the replicase start. The start of the maturation protein gene is accessible in RNA being replicated but hidden within RNA secondary structure in the completed MS2 RNA; this ensures translation of only a very few copies of maturation protein per RNA. Finally, the lysis protein gene can only be initiated by ribosomes that have completed translation of the coat protein gene and "slip back" to the start of the lysis protein gene, at about a 5% frequency. 70: 253: 452: 44: 635: 601:
and his team, building upon their earlier milestone in 1972 of the first gene to be completely sequenced, the MS2 coat protein. These sequences were determined at the RNA level. The first effort at a statistical analysis of the MS2 genome was a search for patterns in the nucleotide sequence. Several
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The virus was isolated in 1961 and its genome was the first to be fully sequenced, in 1976, providing a crucial understanding of genetic codes. In practical applications, MS2's structural components have been used to detect RNA in living cells. The virus is also under research for potential uses in
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The MS2 lifecycle involves infecting bacteria with the fertility factor, enabling the virus to attach to the pilus, though the mechanism by which the virus's RNA enters the bacterium remains unknown. Once inside, the viral RNA starts functioning as a messenger RNA to produce viral proteins. MS2
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Fiers W, Contreras R, Duerinck F, Haegeman G, Iserentant D, Merregaert J, Min Jou W, Molemans F, Raeymaekers A, Van den Berghe A, Volckaert G, Ysebaert M (April 1976). "Complete nucleotide sequence of bacteriophage MS2 RNA: primary and secondary structure of the replicase gene".
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Replication of the plus-strand MS2 genome requires synthesis of the complementary minus strand RNA, which can then be used as a template for synthesis of a new plus strand RNA. MS2 replication has been much less well studied than replication of the highly related
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for the production of phage proteins. The gene for the most abundant protein, the coat protein, can be immediately translated. The translation start of the replicase gene is normally hidden within RNA secondary structure, but can be transiently opened as
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from coat proteins can occur in the absence of RNA; however, capsid assembly is nucleated by coat protein dimer binding to the operator hairpin, and assembly occurs at much lower concentrations of coat protein when MS2 RNA is present.
467:(viral particle) is about 27 nm in diameter, as determined by electron microscopy. It consists of one copy of the maturation protein and 180 copies of the coat protein (organized as 90 dimers) arranged into an 557:
The formation of the virion is thought to be initiated by binding of maturation protein to the MS2 RNA; in fact, the complex of maturation protein and RNA is infectious. The assembly of the icosahedral shell or
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Bacterial lysis and release of newly formed virions occurs when sufficient lysis protein has accumulated. Lysis (L) protein forms pores in the cytoplasmic membrane, which leads to loss of
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pass through the coat protein gene. Replicase translation is also shut down once large amounts of coat protein have been made; coat protein dimers bind and stabilize the RNA "operator
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Sanger F, Air GM, Barrell BG, Brown NL, Coulson AR, Fiddes CA, Hutchison CA, Slocombe PM, Smith M (February 1977). "Nucleotide sequence of bacteriophage phi X174 DNA".
1444: 522:, which includes the F-pilin protein that serves as the viral receptor. MS2 attaches to the F-pilin on the side of the pilus using its single maturation protein. 623:, its similar optimum proliferation conditions, and non-pathogenicity to humans, has been used as substitute for noroviruses in studies of disease transmission. 1103:"National Academy of Sciences: Abstracts of Papers Presented at the Autumn Meeting, 29 October, La Jolla, California, 30 October-1 November 1961, Los Angeles". 231:
replicates its plus-strand genome by creating a minus strand RNA as a template. The virus then assembles, and the bacterial cell lyses, releasing new viruses.
239:, its preferred proliferation conditions, and its lack of pathogenicity to humans, MS2 serves as a substitute in studies of norovirus disease transmission. 439:, and is translated upon viral uncoating within the host cell. Although the four proteins are encoded by the same messenger/viral RNA, they are not all 227:
It is small and contains a maturation protein, coat protein, and genomic RNA. It also has one of the smallest known genomes, encoding four proteins.
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non-coding sequences were identified, however at the time of this investigation (1979), the functions of the non-coding patterns were unknown.
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is one of the smallest known, consisting of 3569 nucleotides of single-stranded RNA. It encodes just four proteins: the maturation protein (
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Min Jou W, Haegeman G, Ysebaert M, Fiers W (May 1972). "Nucleotide sequence of the gene coding for the bacteriophage MS2 coat protein".
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Golmohammadi R, Valegård K, Fridborg K, Liljas L (December 1993). "The refined structure of bacteriophage MS2 at 2.8 A resolution".
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and appears to be essential to the lysis activity, although their different locations suggest that they have evolved independently.
910:"Delineating the Specific Influence of Virus Isoelectric Point and Size on Virus Adsorption and Transport Through Sandy Soils" 361: 336: 311: 281: 822:
Strauss JH, Sinsheimer RL (July 1963). "Purification and properties of bacteriophage MS2 and of its ribonucleic acid".
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Since 1998, the MS2 operator hairpin and coat protein have found utility in the detection of RNA in living cells (see
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Valegård K, Liljas L, Fridborg K, Unge T (May 1990). "The three-dimensional structure of the bacterial virus MS2".
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is assembled, the helices and hairpin face the exterior of the particle, while the β-sheet faces the interior.
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Erickson JW, Altman GG (April 1979). "A search for patterns in the nucleotide sequence of the MS2 genome".
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drug delivery, tumor imaging, and light harvesting. Furthermore, because of its structural similarities to
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In 1961, MS2 was isolated by Alvin John Clark and recognized as an RNA-containing phage very similar to
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Glasgow J, Tullman-Ercek D (July 2014). "Production and applications of engineered viral capsids".
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In 1976, the MS2 genome was the first genome to be completely sequenced. This was accomplished by
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via an important P330 residue. A LS dipeptide motif on the L protein is found throughout the genus
551: 221: 609:). MS2 and other viral capsids are also currently under investigation as agents in drug delivery, 541: 1349: 1265: 1230: 1179: 890: 804: 720:"Crystal structure of the coat protein from the GA bacteriophage: model of the unassembled dimer" 567: 213: 392: 1449: 718:
Ni CZ, White CA, Mitchell RS, Wickersham J, Kodandapani R, Peabody DS, Ely KR (December 1996).
554:, partly because the MS2 replicase has been difficult to isolate, but is likely to be similar. 1485: 1341: 1306: 1222: 1171: 1128: 1085: 1034: 985: 950: 882: 839: 796: 749: 698: 693:
van Duin J, Tsareva N (2006). "Single-stranded RNA phages. Chapter 15". In Calendar RL (ed.).
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Bertrand E, Chartrand P, Schaefer M, Shenoy SM, Singer RH, Long RM (October 1998).
1234: 1183: 894: 808: 598: 491: 154: 142: 52: 1400: 1396: 1392: 1388: 1124: 935: 451: 252: 216:. MS2 is a member of a family of closely related bacterial viruses that includes 17: 606: 487: 468: 236: 1435: 379: 374: 349: 324: 298: 294: 1337: 630: 483: 272: 56: 620: 571: 535: 412: 166: 94: 1345: 1132: 1089: 1038: 981: 843: 735: 1310: 1175: 989: 954: 886: 800: 753: 1470: 1429: 1226: 1070: 531: 1020: 1261: 511: 634: 43: 1218: 1167: 878: 792: 559: 495: 472: 464: 1406: 525:
Once the viral RNA has entered the cell, it begins to function as a
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are labelled blue (chain a), green (chain b) and magenta (chain c)
610: 540: 519: 450: 400: 251: 81: 575: 1410: 1005:"MS2 Lysis of Escherichia coli Depends on Host Chaperone DnaJ" 697:(Second ed.). Oxford University Press. pp. 175–196. 203: 518:. Genes on the F plasmid specifies the proteins of the F 1369:"Viruses spread 'like crazy' in an office, study finds" 475:, protecting the genomic RNA inside. The virion has an 1285:"Localization of ASH1 mRNA particles in living yeast" 482:
The structure of the coat protein is a five-stranded
1460: 1419: 908:Dowd SE, Pillai SD, Wang S, Corapcioglu MY (1998). 1054:"Mutational analysis of the MS2 lysis protein L" 1052:Chamakura KR, Edwards GB, Young R (July 2017). 435:. The positive-stranded RNA genome serves as a 423:overlaps both the 3'-end of the upstream gene ( 431:), and was one of the first known examples of 8: 1003:Chamakura KR, Tran JS, Young R (June 2017). 514:that allows cells to serve as DNA donors in 619:MS2, due to its structural similarities to 199:), commonly called MS2, is an icosahedral, 1407: 688: 686: 684: 682: 680: 678: 506:MS2 infects enteric bacteria carrying the 259: 42: 31: 1300: 1079: 1069: 1028: 944: 934: 743: 427:) and the 5'-end of the downstream gene ( 574:. The lysis protein is known to bind to 765: 763: 674: 1326:Applied Microbiology and Biotechnology 616:, and light harvesting applications. 7: 459:virion (cross section and side view) 25: 586:MS2 in History of Science and Use 206:virus that infects the bacterium 1111:(3488): 1425–37. November 1961. 633: 471:shell with triangulation number 68: 1250:Journal of Mathematical Biology 419:) protein. The gene encoding 201:positive-sense single-stranded 1: 1302:10.1016/S1097-2765(00)80143-4 1125:10.1126/science.134.3488.1425 936:10.1128/aem.64.2.405-410.1998 836:10.1016/S0022-2836(63)80017-0 407:) protein, the coat protein ( 55:. The three quasi-equivalent 970:Journal of Molecular Biology 824:Journal of Molecular Biology 545:Bacteriophage MS2 life cycle 1535: 1367:Fox M (8 September 2014). 1338:10.1007/s00253-014-5787-3 915:Appl. Environ. Microbiol. 256:Bacteriophage MS2 genome 212:and other members of the 63: 50: 41: 34: 1421:Enterobacteria phage MS2 1009:Journal of Bacteriology 455:Schematic drawing of a 982:10.1006/jmbi.1993.1616 736:10.1002/pro.5560051211 546: 460: 257: 570:and breakdown of the 544: 516:bacterial conjugation 454: 255: 1071:10.1099/mic.0.000485 508:fertility (F) factor 443:at the same levels. 65:Virus classification 1211:1977Natur.265..687S 1160:1972Natur.237...82J 1117:1961Sci...134.1425. 1021:10.1128/JB.00058-17 927:1998ApEnM..64..405D 871:1990Natur.345...36V 785:1976Natur.260..500F 1262:10.1007/BF00275725 695:The Bacteriophages 568:membrane potential 547: 461: 258: 214:Enterobacteriaceae 51:Bacteriophage MS2 1501: 1500: 1462:Emesvirus zinderi 1413:Taxon identifiers 477:isoelectric point 433:overlapping genes 389: 388: 196:Emesvirus zinderi 191:Bacteriophage MS2 188: 187: 181:Emesvirus zinderi 36:Emesvirus zinderi 18:Emesvirus zinderi 16:(Redirected from 1526: 1494: 1493: 1481: 1480: 1479: 1453: 1452: 1440: 1439: 1438: 1408: 1377: 1376: 1364: 1358: 1357: 1321: 1315: 1314: 1304: 1280: 1274: 1273: 1245: 1239: 1238: 1219:10.1038/265687a0 1205:(5596): 687–95. 1194: 1188: 1187: 1168:10.1038/237082a0 1143: 1137: 1136: 1100: 1094: 1093: 1083: 1073: 1049: 1043: 1042: 1032: 1000: 994: 993: 965: 959: 958: 948: 938: 905: 899: 898: 879:10.1038/345036a0 854: 848: 847: 819: 813: 812: 793:10.1038/260500a0 767: 758: 757: 747: 715: 709: 708: 690: 659:bacteriophage Qβ 654:bacteriophage f2 643: 638: 637: 592:bacteriophage f2 552:bacteriophage Qβ 260: 222:bacteriophage Qβ 218:bacteriophage f2 209:Escherichia coli 73: 72: 53:capsid structure 46: 32: 27:Species of virus 21: 1534: 1533: 1529: 1528: 1527: 1525: 1524: 1523: 1504: 1503: 1502: 1497: 1489: 1484: 1475: 1474: 1469: 1456: 1448: 1443: 1434: 1433: 1428: 1415: 1391:(also isolates 1389:Complete genome 1385: 1380: 1366: 1365: 1361: 1332:(13): 5847–58. 1323: 1322: 1318: 1282: 1281: 1277: 1247: 1246: 1242: 1196: 1195: 1191: 1145: 1144: 1140: 1102: 1101: 1097: 1051: 1050: 1046: 1002: 1001: 997: 967: 966: 962: 907: 906: 902: 865:(6270): 36–41. 856: 855: 851: 821: 820: 816: 779:(5551): 500–7. 769: 768: 761: 730:(12): 2485–93. 724:Protein Science 717: 716: 712: 705: 692: 691: 676: 672: 639: 632: 629: 588: 504: 449: 399:-protein), the 250: 245: 224:, R17, and GA. 184: 67: 28: 23: 22: 15: 12: 11: 5: 1532: 1530: 1522: 1521: 1516: 1514:Bacteriophages 1506: 1505: 1499: 1498: 1496: 1495: 1482: 1466: 1464: 1458: 1457: 1455: 1454: 1441: 1425: 1423: 1417: 1416: 1411: 1405: 1404: 1384: 1383:External links 1381: 1379: 1378: 1373:The Today Show 1359: 1316: 1289:Molecular Cell 1275: 1240: 1189: 1154:(5350): 82–8. 1138: 1095: 1064:(7): 961–969. 1044: 995: 960: 921:(2): 405–410. 900: 849: 814: 759: 710: 704:978-0195148503 703: 673: 671: 668: 667: 666: 664:phi-X174 phage 661: 656: 651: 645: 644: 641:Viruses portal 628: 625: 587: 584: 503: 500: 448: 445: 387: 386: 383: 372: 369: 356: 355: 352: 347: 344: 331: 330: 327: 322: 319: 306: 305: 302: 292: 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1014: 1010: 1006: 999: 996: 991: 987: 983: 979: 976:(3): 620–39. 975: 971: 964: 961: 956: 952: 947: 942: 937: 932: 928: 924: 920: 917: 916: 911: 904: 901: 896: 892: 888: 884: 880: 876: 872: 868: 864: 860: 853: 850: 845: 841: 837: 833: 829: 825: 818: 815: 810: 806: 802: 798: 794: 790: 786: 782: 778: 774: 766: 764: 760: 755: 751: 746: 741: 737: 733: 729: 725: 721: 714: 711: 706: 700: 696: 689: 687: 685: 683: 681: 679: 675: 669: 665: 662: 660: 657: 655: 652: 650: 649:bacteriophage 647: 646: 642: 636: 631: 626: 624: 622: 617: 615: 612: 608: 603: 600: 595: 593: 585: 583: 581: 577: 573: 569: 564: 561: 555: 553: 543: 539: 537: 533: 528: 527:messenger RNA 523: 521: 517: 513: 509: 501: 499: 497: 493: 489: 485: 480: 479:(pI) of 3.9. 478: 474: 470: 466: 458: 453: 446: 444: 442: 438: 437:messenger RNA 434: 430: 426: 422: 418: 414: 410: 406: 402: 398: 394: 384: 382: 381: 376: 375:RNA replicase 373: 370: 368: 365: 364: 363: 358: 357: 353: 351: 350:lysis protein 348: 345: 343: 340: 339: 338: 333: 332: 328: 326: 323: 320: 318: 315: 314: 313: 308: 307: 303: 301: 300: 296: 293: 290: 288: 285: 284: 283: 278: 277: 274: 271: 268: 265: 262: 261: 254: 247: 242: 240: 238: 232: 228: 225: 223: 219: 215: 211: 210: 205: 202: 198: 197: 192: 183: 182: 177: 174: 173: 170: 169: 165: 162: 161: 158: 157: 153: 150: 149: 146: 145: 141: 138: 137: 134: 133: 132:Leviviricetes 129: 126: 125: 122: 121: 120:Lenarviricota 117: 114: 113: 110: 109: 108:Orthornavirae 105: 102: 101: 98: 97: 93: 90: 87: 86: 83: 80: 77: 76: 71: 66: 62: 58: 54: 49: 45: 40: 37: 33: 30: 19: 1519:Fiersviridae 1461: 1420: 1372: 1362: 1329: 1325: 1319: 1292: 1288: 1278: 1253: 1249: 1243: 1202: 1198: 1192: 1151: 1147: 1141: 1108: 1104: 1098: 1061: 1058:Microbiology 1057: 1047: 1012: 1008: 998: 973: 969: 963: 918: 913: 903: 862: 858: 852: 827: 823: 817: 776: 772: 727: 723: 713: 694: 618: 604: 599:Walter Fiers 596: 589: 579: 565: 556: 548: 524: 505: 481: 462: 456: 428: 424: 420: 416: 408: 404: 396: 390: 380:beta subunit 378: 366: 360: 359: 341: 335: 334: 325:coat protein 316: 310: 309: 297: 286: 280: 279: 269:Gene product 233: 229: 226: 207: 195: 194: 190: 189: 180: 179: 167: 156:Fiersviridae 155: 144:Norzivirales 143: 131: 119: 107: 95: 88: 78:(unranked): 35: 29: 621:noroviruses 607:MS2 tagging 494:. When the 469:icosahedral 411:), and the 237:noroviruses 1508:Categories 1477:Q106960351 670:References 502:Life cycle 393:MS2 genome 295:maturation 57:conformers 830:: 43–54. 580:Levivirus 572:cell wall 532:ribosomes 488:α-helices 486:with two 457:Levivirus 447:Structure 441:expressed 413:replicase 175:Species: 168:Emesvirus 103:Kingdom: 96:Riboviria 1471:Wikidata 1450:11459711 1436:Q4840020 1430:Wikidata 1346:24816622 1270:85199492 1133:17795773 1090:28691656 1039:28396351 844:13978804 627:See also 367:(MS2g4) 342:(MS2g3) 317:(MS2g2) 287:(MS2g1) 243:Virology 151:Family: 115:Phylum: 1354:6212583 1311:9809065 1235:4206886 1207:Bibcode 1184:4153893 1176:4555447 1156:Bibcode 1113:Bibcode 1105:Science 1081:5775895 1030:5446614 990:8254664 955:9464373 923:Bibcode 895:2803228 887:2330049 867:Bibcode 809:4289674 801:1264203 781:Bibcode 754:8976557 745:2143325 614:imaging 536:hairpin 512:plasmid 492:hairpin 484:β-sheet 463:An MS2 371:2055 nt 299:protein 291:1487 nt 163:Genus: 139:Order: 127:Class: 1399:, and 1352:  1344:  1309:  1268:  1233:  1227:870828 1225:  1199:Nature 1182:  1174:  1148:Nature 1131:  1088:  1078:  1037:  1027:  1015:(12). 988:  953:  946:106058 943:  893:  885:  859:Nature 842:  807:  799:  773:Nature 752:  742:  701:  560:capsid 496:capsid 490:and a 465:virion 346:295 nt 321:510 nt 248:Genome 1491:8TT92 1445:IRMNG 1350:S2CID 1266:S2CID 1231:S2CID 1180:S2CID 891:S2CID 805:S2CID 611:tumor 520:pilus 401:lysis 89:Realm 82:Virus 1397:DL16 1342:PMID 1307:PMID 1223:PMID 1172:PMID 1129:PMID 1086:PMID 1035:PMID 986:PMID 951:PMID 883:PMID 840:PMID 797:PMID 750:PMID 699:ISBN 576:DnaJ 510:, a 391:The 385:545 329:130 304:393 266:Size 263:Gene 1486:CoL 1401:J20 1393:R17 1334:doi 1297:doi 1258:doi 1215:doi 1203:265 1164:doi 1152:237 1121:doi 1109:134 1076:PMC 1066:doi 1062:163 1025:PMC 1017:doi 1013:199 978:doi 974:234 941:PMC 931:doi 875:doi 863:345 832:doi 789:doi 777:260 740:PMC 732:doi 473:T=3 429:rep 421:lys 417:rep 405:lys 362:rep 354:75 337:lys 282:mat 204:RNA 1510:: 1488:: 1473:: 1447:: 1432:: 1395:, 1371:. 1348:. 1340:. 1330:98 1328:. 1305:. 1291:. 1287:. 1264:. 1252:. 1229:. 1221:. 1213:. 1201:. 1178:. 1170:. 1162:. 1150:. 1127:. 1119:. 1107:. 1084:. 1074:. 1060:. 1056:. 1033:. 1023:. 1011:. 1007:. 984:. 972:. 949:. 939:. 929:. 919:64 912:. 889:. 881:. 873:. 861:. 838:. 826:. 803:. 795:. 787:. 775:. 762:^ 748:. 738:. 726:. 722:. 677:^ 594:. 425:cp 409:cp 377:, 312:cp 273:aa 220:, 91:: 1403:) 1375:. 1356:. 1336:: 1313:. 1299:: 1293:2 1272:. 1260:: 1254:7 1237:. 1217:: 1209:: 1186:. 1166:: 1158:: 1135:. 1123:: 1115:: 1092:. 1068:: 1041:. 1019:: 992:. 980:: 957:. 933:: 925:: 897:. 877:: 869:: 846:. 834:: 828:7 811:. 791:: 783:: 756:. 734:: 728:5 707:. 415:( 403:( 397:A 193:( 20:)

Index

Emesvirus zinderi
MS2 capsid
capsid structure
conformers
Virus classification
Edit this classification
Virus
Riboviria
Orthornavirae
Lenarviricota
Leviviricetes
Norzivirales
Fiersviridae
Emesvirus
positive-sense single-stranded
RNA
Escherichia coli
Enterobacteriaceae
bacteriophage f2
bacteriophage Qβ
noroviruses
caption
aa
mat
maturation
protein
cp
coat protein
lys
lysis protein

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