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Idealised population

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Idealised population models could not only provide us with information about present populations conditions but are useful in revealing natural history and population dynamics in the past as well. Using an idealised population model, Anders Eriksson and Andrea Manica (2012) tested the hypothesis of
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In 1908, G. H. Hardy and Wilhelm Weinberg modeled an idealised population to demonstrate that in the absence of selection, migration, random genetic drift, allele frequencies stay constant over time, and that in the presence of random mating, genotype frequencies are related to allele frequencies
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1:1, and then multiply by mitochondrial genes substitution rate, per generation. Making several assumptions according to the sex ratio and number of juveniles, they were able to calculate that in contrast to historical records, modern whale populations are far from harvestable range.
135:. The authors compare genome sequences of two human populations, Neanderthals and chimpanzee. Eriksson and Manica created a stepping stone model under which Africa and Eurasia are represented as a string of equal size populations. They concluded that under the 35:
is one that can be described using a number of simplifying assumptions. Models of idealised populations are either used to make a general point, or they are fit to data on real populations for which the assumptions may not hold true. For example,
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Eriksson, Anders, and Andrea Manica. "Effect of ancient population structure on the degree of polymorphism shared between modern human populations and ancient hominins." Proceedings of the National Academy of Sciences 109, no. 35 (2012):
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that is capable of simulating simultaneous evolution of populations based on Fisher-Wright model. Idealised population model also, could be used in several simple simulations designed for education. So,
139:, in which Europeans can exchange genetic information with Asians and not with Africans, similarities between Neanderthal genome and Eurasian could be explained by ancient populations structure. 72:, rather than the non-overlapping generations of the Fisher-Wright model. The complexities of real populations can cause their behavior to match an idealised population with an 113:
data, they questioned: have populations of North Atlantic great whales recovered enough for commercial whaling? To calculate genetic diversity the authors multiply long term
184:. Nielsen, Rasmus, and Montgomery Slatkin. An Introduction to Population Genetics: Theory and Applications. Sunderland, MA: Sinauer Associates, 2013. Print. 132: 40:
is used to fit data to models of idealised populations. The most common idealized population in population genetics is described in the
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simulator (Requires an updated Java version), which is designed to visualize influence of genetic drift on natural populations.
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A good example of usage idealised population model, in tracking natural population conditions, could be found in a research of
338: 333: 211: 193:.Crow, James F. "Population genetics history: a personal view." Annual Review of Genetics 21, no. 1 (1987): 1-22. 73: 90: 164:
Simulation is designed to introduce general public to the concept of natural selection. Another example is
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that is very different from the census population size of the real population. For sexual
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Philosophical Transactions of the Royal Society B: Biological Sciences
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Hanage, W. P.; Spratt, B. G.; Turner, K. M. E.; Fraser, C. (2006).
212:"Whales before whaling in the North Atlantic" 8: 64:with any other member. Another example is a 133:archaic human admixture with modern humans 56:have constant size, and their members can 306: 240: 147:Usage of models, also allows to perform 52:(1922, 1930) and (1931). Wright-Fisher 177: 117:size of the females by two, assuming 7: 25: 126:Application to population history 283:"Modelling bacterial speciation" 162:Charles Darwin: Can you survive? 93:called the Hardy-Weinberg law. 1: 97:Usage in population dynamics 355: 91:binomial square principle 74:effective population size 68:, which has overlapping 18:Fisher-Wright population 251:10.1126/science.1084524 299:10.1098/rstb.2006.1926 339:Statistical genetics 143:Computer simulations 137:stepping stone model 115:effective population 33:idealised population 334:Population genetics 293:(1475): 2039–2044. 233:2003Sci...301..508R 208:Palumbi, Stephen R. 42:Wright-Fisher model 29:population genetics 107:Stephen R. Palumbi 227:(5632): 508–510. 111:genetic diversity 38:coalescent theory 16:(Redirected from 346: 320: 310: 273: 269: 263: 262: 244: 242:10.1.1.1025.5800 216: 200: 194: 191: 185: 182: 157:computer program 21: 354: 353: 349: 348: 347: 345: 344: 343: 324: 323: 280: 277: 276: 270: 266: 214: 202: 201: 197: 192: 188: 183: 179: 174: 145: 128: 99: 89:according to a 86: 23: 22: 15: 12: 11: 5: 352: 350: 342: 341: 336: 326: 325: 322: 321: 275: 274: 264: 195: 186: 176: 175: 173: 170: 144: 141: 127: 124: 109:(2003). Using 98: 95: 85: 84:Hardy-Weinberg 82: 24: 14: 13: 10: 9: 6: 4: 3: 2: 351: 340: 337: 335: 332: 331: 329: 318: 314: 309: 304: 300: 296: 292: 288: 284: 279: 278: 268: 265: 260: 256: 252: 248: 243: 238: 234: 230: 226: 222: 221: 213: 209: 205: 199: 196: 190: 187: 181: 178: 171: 169: 167: 166:Genetic Drift 163: 158: 154: 150: 142: 140: 138: 134: 125: 123: 120: 116: 112: 108: 104: 96: 94: 92: 83: 81: 79: 75: 71: 67: 63: 59: 55: 51: 50:Ronald Fisher 47: 46:Sewall Wright 43: 39: 34: 30: 19: 290: 286: 272:13956-13960. 267: 224: 218: 198: 189: 180: 146: 129: 100: 87: 32: 26: 149:simulations 70:generations 66:Moran model 54:populations 328:Categories 204:Roman, Joe 172:References 155:is a free 237:CiteSeerX 119:sex ratio 103:Joe Roman 62:reproduce 317:17062418 259:12881568 210:(2003). 78:diploids 308:1764933 229:Bibcode 220:Science 315:  305:  257:  239:  44:after 215:(PDF) 153:PopG 313:PMID 255:PMID 131:the 105:and 60:and 58:mate 48:and 303:PMC 295:doi 291:361 247:doi 225:301 31:an 27:In 330:: 311:. 301:. 289:. 285:. 253:. 245:. 235:. 223:. 217:. 206:; 319:. 297:: 261:. 249:: 231:: 20:)

Index

Fisher-Wright population
population genetics
coalescent theory
Wright-Fisher model
Sewall Wright
Ronald Fisher
populations
mate
reproduce
Moran model
generations
effective population size
diploids
binomial square principle
Joe Roman
Stephen R. Palumbi
genetic diversity
effective population
sex ratio
archaic human admixture with modern humans
stepping stone model
simulations
PopG
computer program
Charles Darwin: Can you survive?
Genetic Drift
Roman, Joe
Palumbi, Stephen R.
"Whales before whaling in the North Atlantic"
Science

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