Knowledge

Institute for Disease Modeling

Source šŸ“

429: 291:
Jeffrey W Eaton; Nicolas BacaĆ«r; Anna Bershteyn; Valentina Cambiano; Anne Cori; Rob E Dorrington; et al. (October 2015), "Assessment of epidemic projections using recent HIV survey data in South Africa: a validation analysis of ten mathematical models of HIV epidemiology in the antiretroviral
333:
Ouedraogo, Andre Lin; Perkins, T Alex; Steinkraus, Jeffrey; ten Bosch, Quirine A; Ting, Hung-Fu; Titova, Svetlana; Wagner, Bradley G; Welkhoff, Philip A; Wenger, Edward A; Wiswell, Christian N (2018), "Implementation and applications of EMOD, an individual-based multi-disease modeling platform",
332:
Bershteyn, Anna; Gerardin, Jaline; Bridenbecker, Daniel; Lorton, Christopher W; Bloedow, Jonathan; Baker, Robert S; Chabot-Couture, Guillaume; Chen, Ye; Fischle, Thomas; Frey, Kurt; Gauld, Jillian S; Hu, Hao; Izzo, Amanda S; Klein, Daniel J; Lukacevic, Dejan; McCarthy, Kevin A; Miller, Joel C;
489: 246: 470: 137: 31: 226: 202: 86: 54:, IDM has transitioned to all-remote work with no physical offices. It will eventually relocate to the Gates Foundation's main office in 463: 20: 504: 416:, May 4, 2020, interview with Dr. Mike Famulare from the Institute for Disease Modeling recorded April 29, 2020 starts at 28:30 42:
and HIV (with EMOD). IDM releases source code of their stable models to the public. While at IV, the institute was located in
456: 90: 499: 266:
Kerr, Cliff; Mistry, Dina; et al. (2021). "Covasim: an agent-based model of COVID-19 dynamics and interventions".
82: 111: 412: 407: 66:
EMOD is the group's individual-based disease modeling software (not a compartmental model) initially coded
168: 494: 335: 24: 267: 227:"As Washington state COVID cases keep falling, here's the data driving the ongoing 'stay home' order" 71: 43: 81:
agent-based model named "Covasim." It was used initially to advise on decision-making during the
51: 27:(IV) funded by Bill and Melinda Gates, IDM has transitioned in mid-2020 to the Gates Foundation. 428: 272: 436: 372: 354: 321: 362: 344: 311: 301: 207: 138:"How big will the coronavirus outbreak get? This Bellevue scientist is figuring that out" 74:. The software can model malaria, HIV, tuberculosis, measles, dengue, polio and typhoid. 440: 367: 398: 306: 483: 35: 251: 23:. Established in 2008 as part of the Global Good Fund, a non-profit subsidiary of 93:, is open-source and has been used by independent researchers around the world. 358: 349: 376: 325: 316: 231: 203:"How Bad Will Oregon's Outbreak Get? It Depends on Which Experts You Ask" 78: 47: 39: 175: 55: 402: 247:"Coronavirus: How the West Coast is winning, and what Utah can learn" 188: 213:
Two reliable studies show divergent COVID-19 outcomes in Oregon.
154: 391: 19:
is an institute within the Global Health Division of the
444: 38:
research. Its models include malaria, polio, measles,
169:"Improving The Battle Against Infectious Diseases" 112:"The Gates Foundation leans into disease modeling" 89:, gaining national attention. Covasim, coded in 131: 129: 464: 8: 225:Todd Bishop; Taylor Soper (April 15, 2020), 70:2005. It has been released to the public as 32:mathematical modelling of infectious disease 471: 457: 366: 348: 315: 305: 271: 490:Companies based in Bellevue, Washington 102: 110:Cheney, Catherine (3 December 2020). 7: 425: 423: 77:In 2020, IDM developed a designated 17:Institute for Disease Modeling (IDM) 245:Gillian Friedman (April 3, 2020). 14: 136:Sandi Doughton (March 15, 2020). 21:Bill and Melinda Gates Foundation 427: 167:Ross Reynolds (March 14, 2014). 1: 408:COVID-19 Chapter 11: Modeling 307:10.1016/S2214-109X(15)00080-7 273:10.1101/2020.05.10.20097469v1 201:Tess Riski (March 31, 2020). 67: 443:. You can help Knowledge by 83:COVID-19 pandemic in Oregon 521: 422: 413:This Podcast Will Kill You 62:Disease modeling software 46:. After the outbreak of 505:COVID-19 pandemic stubs 435:This article about the 34:and other quantitative 350:10.1093/femspd/fty059 336:Pathogens and Disease 189:Bershteyn et al. 2018 25:Intellectual Ventures 72:open-source software 44:Bellevue, Washington 500:Simulation software 30:IDM specializes in 452: 451: 437:COVID-19 pandemic 300:(10): e598ā€“e608, 255:. Salt Lake City. 155:Eaton et al. 2015 142:The Seattle Times 512: 473: 466: 459: 431: 424: 395: 394: 392:Official website 379: 370: 352: 328: 319: 309: 278: 277: 275: 263: 257: 256: 242: 236: 235: 222: 216: 215: 198: 192: 186: 180: 179: 173: 164: 158: 152: 146: 145: 133: 124: 123: 121: 119: 107: 87:Washington State 69: 52:Washington State 520: 519: 515: 514: 513: 511: 510: 509: 480: 479: 478: 477: 420: 390: 389: 386: 331: 290: 287: 282: 281: 265: 264: 260: 244: 243: 239: 224: 223: 219: 208:Willamette Week 200: 199: 195: 187: 183: 171: 166: 165: 161: 153: 149: 135: 134: 127: 117: 115: 109: 108: 104: 99: 64: 12: 11: 5: 518: 516: 508: 507: 502: 497: 492: 482: 481: 476: 475: 468: 461: 453: 450: 449: 432: 418: 417: 405: 396: 385: 384:External links 382: 381: 380: 329: 292:therapy era", 286: 283: 280: 279: 258: 237: 217: 193: 181: 159: 147: 125: 101: 100: 98: 95: 63: 60: 13: 10: 9: 6: 4: 3: 2: 517: 506: 503: 501: 498: 496: 493: 491: 488: 487: 485: 474: 469: 467: 462: 460: 455: 454: 448: 446: 442: 438: 433: 430: 426: 421: 415: 414: 409: 406: 404: 400: 397: 393: 388: 387: 383: 378: 374: 369: 364: 360: 356: 351: 346: 342: 338: 337: 330: 327: 323: 318: 317:10044/1/33879 313: 308: 303: 299: 295: 289: 288: 284: 274: 269: 262: 259: 254: 253: 248: 241: 238: 234: 233: 228: 221: 218: 214: 210: 209: 204: 197: 194: 190: 185: 182: 177: 170: 163: 160: 156: 151: 148: 143: 139: 132: 130: 126: 113: 106: 103: 96: 94: 92: 88: 84: 80: 75: 73: 61: 59: 57: 53: 49: 45: 41: 37: 36:global health 33: 28: 26: 22: 18: 495:Epidemiology 445:expanding it 434: 419: 411: 340: 334: 297: 293: 261: 252:Deseret News 250: 240: 230: 220: 212: 206: 196: 184: 162: 150: 141: 116:. Retrieved 105: 76: 65: 29: 16: 15: 174:. Seattle: 118:30 December 484:Categories 294:The Lancet 97:References 359:2049-632X 377:29986020 326:26385301 232:Geekwire 79:COVID-19 48:COVID-19 40:COVID-19 368:6067119 285:Sources 268:medRxiv 176:KUOW-FM 172:(audio) 114:. Devex 85:and in 56:Seattle 403:GitHub 375:  365:  357:  324:  270:  91:Python 439:is a 343:(5), 441:stub 399:EMOD 373:PMID 355:ISSN 322:PMID 120:2020 401:on 363:PMC 345:doi 312:hdl 302:doi 50:in 486:: 410:, 371:, 361:, 353:, 341:76 339:, 320:, 310:, 296:, 249:. 229:, 211:. 205:. 140:. 128:^ 68:c. 58:. 472:e 465:t 458:v 447:. 347:: 314:: 304:: 298:3 276:. 191:. 178:. 157:. 144:. 122:.

Index

Bill and Melinda Gates Foundation
Intellectual Ventures
mathematical modelling of infectious disease
global health
COVID-19
Bellevue, Washington
COVID-19
Washington State
Seattle
open-source software
COVID-19
COVID-19 pandemic in Oregon
Washington State
Python
"The Gates Foundation leans into disease modeling"


"How big will the coronavirus outbreak get? This Bellevue scientist is figuring that out"
Eaton et al. 2015
"Improving The Battle Against Infectious Diseases"
KUOW-FM
Bershteyn et al. 2018
"How Bad Will Oregon's Outbreak Get? It Depends on Which Experts You Ask"
Willamette Week
"As Washington state COVID cases keep falling, here's the data driving the ongoing 'stay home' order"
Geekwire
"Coronavirus: How the West Coast is winning, and what Utah can learn"
Deseret News
medRxiv
10.1101/2020.05.10.20097469v1

Text is available under the Creative Commons Attribution-ShareAlike License. Additional terms may apply.

ā†‘