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Transmembrane protein

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241: 223:). Type II and III are anchored with a signal-anchor sequence, with type II being targeted to the ER lumen with its C-terminal domain, while type III have their N-terminal domains targeted to the ER lumen. Type IV is subdivided into IV-A, with their N-terminal domains targeted to the cytosol and IV-B, with an N-terminal domain targeted to the lumen. The implications for the division in the four types are especially manifest at the time of translocation and ER-bound translation, when the protein has to be passed through the ER membrane in a direction dependent on the type. 227: 400:), because its polar residues can face the central water-filled channel of the translocon. Such mechanism is necessary for incorporation of polar α-helices into structures of transmembrane proteins. The amphiphilic helices remain attached to the translocon until the protein is completely synthesized and folded. If the protein remains unfolded and attached to the translocon for too long, it is degraded by specific "quality control" cellular systems. 286:
these proteins is more difficult than globular proteins. As of January 2013 less than 0.1% of protein structures determined were membrane proteins despite being 20–30% of the total proteome. Due to this difficulty and the importance of this class of proteins methods of protein structure prediction based on hydropathy plots, the positive inside rule and other methods have been developed.
417:, such as protein Skp. It is thought that β-barrel membrane proteins come from one ancestor even having different number of sheets which could be added or doubled during evolution. Some studies show a huge sequence conservation among different organisms and also conserved amino acids which hold the structure and help with folding. 285:
which have hydrophobic surfaces, are relatively flexible and are expressed at relatively low levels. This creates difficulties in obtaining enough protein and then growing crystals. Hence, despite the significant functional importance of membrane proteins, determining atomic resolution structures for
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Group I and II transmembrane proteins have opposite final topologies. Group I proteins have the N terminus on the far side and C terminus on the cytosolic side. Group II proteins have the C terminus on the far side and N terminus in the cytosol. However final topology not the only criterion for
31: 396:. The translocon channel provides a highly heterogeneous environment for the nascent transmembrane α-helices. A relatively polar amphiphilic α-helix can adopt a transmembrane orientation in the translocon (although it would be at the membrane surface or unfolded 408:
Stability of beta barrel (β-barrel) transmembrane proteins is similar to stability of water-soluble proteins, based on chemical denaturation studies. Some of them are very stable even in chaotropic agents and high temperature. Their folding
819: 138:. This is the major category of transmembrane proteins. In humans, 27% of all proteins have been estimated to be alpha-helical membrane proteins. Beta-barrel proteins are so far found only in outer membranes of 1254:
Nicholson, L. K.; Cross, T. A. (1989). "Gramicidin cation channel: an experimental determination of the right-handed helix sense and verification of .beta.-type hydrogen bonding".
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micelles has four transmembrane α-helices folded, while the rest of the protein is situated at the micelle-water interface and can adopt different types of non-native
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Bracey MH, Hanson MA, Masuda KR, Stevens RC, Cravatt BF (November 2002). "Structural adaptations in a membrane enzyme that terminates endocannabinoid signaling".
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structures. Free energy differences between such detergent-denatured and native states are similar to stabilities of water-soluble proteins (< 10 kcal/mol).
166:. All beta-barrel transmembrane proteins have simplest up-and-down topology, which may reflect their common evolutionary origin and similar folding mechanism. 848: 211:. Type I transmembrane proteins are anchored to the lipid membrane with a stop-transfer anchor sequence and have their N-terminal domains targeted to the 925:
transporter BtuB, Fe(III)-pyochelin receptor FptA, receptor FepA, ferric hydroxamate uptake receptor FhuA, transporter FecA, and pyoverdine receptor FpvA
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Murzin AG, Lesk AM, Chothia C (March 1994). "Principles determining the structure of beta-sheet barrels in proteins. I. A theoretical analysis".
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has not been reported in natural proteins. Nonetheless, this structure was experimentally observed in specifically designed artificial peptides.
1205:"Mapping the human membrane proteome: a majority of the human membrane proteins can be classified according to function and evolutionary origin" 134:. Alpha-helical proteins are present in the inner membranes of bacterial cells or the plasma membrane of eukaryotic cells, and sometimes in the 644: 1651:
Michalik, Marcin; Orwick-Rydmark, Marcella; Habeck, Michael; Alva, Vikram; Arnold, Thomas; Linke, Dirk; Permyakov, Eugene A. (3 August 2017).
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defining transmembrane protein groups, rather location of topogenic determinants and mechanism of assembly is considered in the classification
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studies, because they do not unfold completely within the membranes (the complete unfolding would require breaking down too many α-helical
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White, Stephen. "General Principle of Membrane Protein Folding and Stability". Stephen White Laboratory Homepage. 10 Nov. 2009. web.
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Outer membrane auxiliary proteins (polysaccharide transporter) - α-helical transmembrane proteins from the outer bacterial membrane
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experiments. This state represents a combination of folded hydrophobic α-helices and partially unfolded segments covered by the
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In addition to the protein domains, there are unusual transmembrane elements formed by peptides. A typical example is
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Drug/Metabolite Transporter (small multidrug resistance transporter EmrE - the structures are retracted as erroneous)
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Hopf, Thomas A.; Colwell, Lucy J.; Sheridan, Robert; Rost, Burkhard; Sander, Chris; Marks, Debora S. (June 2012).
1882: 890: 636: 90: 55: 945: 914: 910: 782: 665: 503: 462: 135: 1351:
Goder, Veit; Spiess, Martin (31 August 2001). "Topogenesis of membrane proteins: determinants and dynamics".
1799: 989:, also known as trimeric outer membrane factors (n=12,S=18) including TolC and multidrug resistance proteins 771: 499: 384:
is technically difficult. There are relatively few examples of the successful refolding experiments, as for
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Elofsson, Arne; Heijne, Gunnar von (7 June 2007). "Membrane Protein Structure: Prediction versus Reality".
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Alberts, Bruce; Johnson, Alexander; Lewis, Julian; Raff, Martin; Roberts, Keith; Walter, Peter (2002).
1719: 1664: 1302: 1018: 754: 605: 509: 309: 94: 1653:"An evolutionarily conserved glycine-tyrosine motif forms a folding core in outer membrane proteins" 1577: 1532: 414: 276: 256: 1743: 163: 101:. Depending on the number of transmembrane segments, transmembrane proteins can be classified as 113:, meaning that they are also permanently attached to the membrane, but do not pass through it. 1936: 1778: 1735: 1692: 1633: 1582: 1545: 1475: 1417: 1368: 1320: 1271: 1236: 1159: 1153: 1125: 1073: 1013: 776: 760: 743: 730: 704: 640: 565: 491: 437: 385: 361: 299: 194: 182: 1563:
Chen, Chien Peter; Rost, Burkhard (2002). "State-of-the-art in membrane protein prediction".
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Carpenter, Elisabeth P; Beis, Konstantinos; Cameron, Alexander D; Iwata, So (October 2008).
1407: 1399: 1360: 1310: 1291:"Bilayer thickness determines the alignment of model polyproline helices in lipid membranes" 1263: 1226: 1216: 1063: 1055: 684: 669: 617: 282: 260: 248: 200: 106: 67: 30: 1946: 880: 866: 723: 585: 559: 392:, all such proteins are normally folded co-translationally within the large transmembrane 332: 295: 216: 208: 98: 17: 1723: 1668: 1306: 335:, or unfolding of peripheral regions and nonregular loops that are locally less stable. 1831: 1687: 1652: 1628: 1601: 1470: 1445: 1412: 1387: 1231: 1204: 1068: 1043: 709: 543: 340: 328: 220: 1364: 1976: 1956: 1916: 1839: 1823: 1774: 582: 550: 204: 59: 1747: 173:, a peptide that forms a dimeric transmembrane β-helix. This peptide is secreted by 1854: 1844: 1190: 517: 470: 275:. The portion of the membrane proteins that are attached to the lipid bilayer (see 268: 170: 159: 155: 1791: 1289:
Kubyshkin, Vladimir; Grage, Stephan L.; Ulrich, Anne S.; Budisa, Nediljko (2019).
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of specific substances across the membrane. They frequently undergo significant
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during synthesis (and the extracellular space, if mature forms are located on
43: 1731: 1044:"Environment Polarity in Proteins Mapped Noninvasively by FTIR Spectroscopy" 964:
are, respectively, the number of beta-strands and the "shear number" of the
922: 679: 441: 357: 143: 75: 42:) 2) a multipass membrane protein (α-helix) 3) a multipass membrane protein 1739: 1696: 1637: 1602:"Three-Dimensional Structures of Membrane Proteins from Genomic Sequencing" 1586: 1549: 1479: 1421: 1372: 1324: 1240: 1221: 1077: 1782: 1275: 1961: 1911: 1386:
Cross, Timothy A.; Sharma, Mukesh; Yi, Myunggi; Zhou, Huan-Xiang (2011).
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Major Facilitator Superfamily (Glycerol-3-phosphate transporter, Lactose
513: 466: 349: 1497: 1267: 1388:"Influence of Solubilizing Environments on Membrane Protein Structures" 1315: 1290: 1186: 1059: 611:
Dicarboxylate/amino acid:cation symporter (proton glutamate symporter)
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Antimicrobial peptide resistance and lipid A acylation protein family
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Beta barrels from eight beta-strands and with "shear number" of ten (
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Monovalent cation/proton antiporter (Sodium/proton antiporter 1 NhaA)
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Increase in the number of 3D structures of membrane proteins known
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to move a substance through the membrane. They are usually highly
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in the nonpolar media). On the other hand, these proteins easily
327:, due to non-native aggregation in membranes, transition to the 315:(α-helical) proteins are unusually stable judging from thermal 1795: 1446:"Overcoming the challenges of membrane protein crystallography" 201:
position of the protein N- and C-termini on the different sides
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Manor, Joshua; Feldblum, Esther S.; Arkin, Isaiah T. (2012).
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or nonpolar solvents for extraction, although some of them (
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Stability and folding of beta-barrel transmembrane proteins
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Almén MS, Nordström KJ, Fredriksson R, Schiöth HB (2009).
105:, or as multipass membrane proteins. Some other integral 97:, is largely hydrophobic and can be visualized using the 34:
Schematic representation of transmembrane proteins: 1) a
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Small-conductance mechanosensitive ion channel (MscS)
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There are two basic types of transmembrane proteins:
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and aggregate and precipitate in water. They require
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Beta-barrels composed of several polypeptide chains
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Beta-barrels composed of a single polypeptide chain
1185:alpha-helical proteins in outer membranes include 917:. They are ligand-gated outer membrane channels ( 529:Proton or sodium translocating F-type and V-type 305:Stability of alpha-helical transmembrane proteins 717:Proteins with single transmembrane alpha-helices 651:Large-conductance mechanosensitive channel, MscL 808:Virulence-related outer membrane protein family 380:Refolding of α-helical transmembrane proteins 46:. The membrane is represented in light yellow. 1807: 1158:. Cambridge University Press. pp. 208–. 631:Alpha-helical channels including ion channels 577:Porters (uniporters, symporters, antiporters) 524:Electrochemical potential-driven transporters 279:) consist mostly of hydrophobic amino acids. 27:Protein spanning across a biological membrane 8: 849:FadL outer membrane protein transport family 338:It is also important to properly define the 376:Folding of α-helical transmembrane proteins 1814: 1800: 1792: 1097:Molecular Biology of the Cell. 4th edition 482:Transmembrane cytochrome b-like proteins: 62:. Many transmembrane proteins function as 1686: 1676: 1627: 1617: 1576: 1531: 1494:"Membrane Proteins of known 3D Structure" 1469: 1411: 1314: 1230: 1220: 1067: 1048:The Journal of Physical Chemistry Letters 1542:10.1146/annurev.biochem.76.052705.163539 239: 1034: 537:P-P-bond hydrolysis-driven transporters 645:inward-rectifier potassium ion channel 352:is different from that in the thermal 1450:Current Opinion in Structural Biology 712:formation protein (DsbA-DsbB complex) 490:; formate dehydrogenase, respiratory 7: 432:Light absorption-driven transporters 267:of these proteins are transmembrane 1295:Physical Chemistry Chemical Physics 598:Resistance-nodulation-cell division 484:coenzyme Q - cytochrome c reductase 427:Transporter Classification Database 290:Thermodynamic stability and folding 477:Oxidoreduction-driven transporters 348:of membrane proteins in detergent 199:This classification refers to the 25: 777:Corticosteroid 11β-dehydrogenases 594:, and Multidrug transporter EmrD) 1124:. Academic Press. pp. 37–. 1003:) . These proteins are secreted. 496:succinate - coenzyme Q reductase 413:is facilitated by water-soluble 331:states, formation of non-native 251:structures can be determined by 93:that spans the membrane, or the 64:gateways to permit the transport 935:) that includes outer membrane 901:Outer membrane phospholipase A1 814:Outer membrane protein W family 453:photosynthetic reaction centres 58:that spans the entirety of the 1392:Trends in Biochemical Sciences 987:Outer membrane efflux proteins 863:General bacterial porin family 802:OmpA-like transmembrane domain 546:(five different conformations) 360:. For example, the "unfolded" 207:. Types I, II, III and IV are 82:) can be also extracted using 1: 1520:Annual Review of Biochemistry 1365:10.1016/S0014-5793(01)02712-0 572:(preprotein translocase SecY) 103:single-pass membrane proteins 1775:10.1016/0022-2836(94)90064-7 1678:10.1371/journal.pone.0182016 999:) and α-hemolysin (heptamer 941:adhesin/invasin OpcA protein 36:single-pass membrane protein 1892:Peripheral membrane protein 929:Outer membrane protein OpcA 661:CorA metal ion transporters 122:Classification by structure 1999: 1983:Integral membrane proteins 1883:Integral membrane proteins 1619:10.1016/j.cell.2012.04.012 1404:10.1016/j.tibs.2010.07.005 1118:Steven R. Goodman (2008). 767:Fatty acid amide hydrolase 549:Calcium ATPase regulators 498:(fumarate reductase); and 463:Light-harvesting complexes 424: 293: 192: 189:Classification by topology 18:Integral polytopic protein 1462:10.1016/j.sbi.2008.07.001 891:Nucleoside-specific porin 637:Voltage-gated ion channel 440:-like proteins including 56:integral membrane protein 1155:Essential bioinformatics 977:Trimeric autotransporter 946:Outer membrane protein G 911:TonB-dependent receptors 783:Signal Peptide Peptidase 772:Cytochrome P450 oxidases 666:Ligand-gated ion channel 504:electron transport chain 162:, or can be secreted as 136:bacterial outer membrane 1927:Lipid raft/microdomains 1732:10.1126/science.1076535 1024:Transmembrane receptors 500:succinate dehydrogenase 1932:Membrane contact sites 1896:Lipid-anchored protein 1878:Membrane glycoproteins 1565:Applied Bioinformatics 1341:, Sixth edition, p.546 1339:Molecular Cell Biology 1222:10.1186/1741-7007-7-50 839:Autotransporter domain 826:Lipid A deacylase PagL 674:acetylcholine receptor 604:transporter AcrB, see 488:cytochrome b6f complex 245: 232: 175:gram-positive bacteria 148:gram-positive bacteria 140:gram-negative bacteria 68:conformational changes 47: 1887:transmembrane protein 831:Opacity family porins 700:Methane monooxygenase 510:Cytochrome c oxidases 253:X-ray crystallography 243: 229: 213:endoplasmic reticulum 209:single-pass molecules 95:transmembrane segment 52:transmembrane protein 33: 1912:Caveolae/Coated pits 1337:Harvey Lodish etc.; 1121:Medical cell biology 1019:Transmembrane domain 865:, known as trimeric 755:Pulmonary surfactant 746:) major coat protein 623:Ammonia transporters 606:multidrug resistance 183:polyproline-II helix 1724:2002Sci...298.1793B 1669:2017PLoSO..1282016M 1307:2019PCCP...2122396K 1301:(40): 22396–22408. 1268:10.1021/bi00450a019 1093:"Membrane Proteins" 757:-associated protein 643:KcsA and KvAP, and 486:(cytochrome bc1 ); 277:annular lipid shell 265:tertiary structures 257:electron microscopy 164:pore-forming toxins 1937:Membrane nanotubes 1822:Structures of the 1316:10.1039/c9cp02996f 1152:Jin Xiong (2006). 855:transporter FadL ( 761:Monoamine oxidases 641:potassium channels 263:. The most common 246: 233: 181:. A transmembrane 48: 1970: 1969: 1870:Membrane proteins 1262:(24): 9379–9385. 1165:978-0-521-84098-9 1131:978-0-12-370458-0 1099:. Garland Science 1060:10.1021/jz300150v 1014:Membrane topology 798:). They include: 744:filamentous phage 731:nitrite reductase 705:Rhomboid protease 685:Chloride channels 566:secretory pathway 492:nitrate reductase 438:Bacteriorhodopsin 386:bacteriorhodopsin 362:bacteriorhodopsin 300:Protein stability 283:Membrane proteins 195:Membrane topology 107:membrane proteins 84:denaturing agents 16:(Redirected from 1990: 1952:Nuclear envelope 1947:Nodes of Ranvier 1816: 1809: 1802: 1793: 1787: 1786: 1758: 1752: 1751: 1718:(5599): 1793–6. 1707: 1701: 1700: 1690: 1680: 1648: 1642: 1641: 1631: 1621: 1612:(7): 1607–1621. 1597: 1591: 1590: 1580: 1560: 1554: 1553: 1535: 1515: 1509: 1508: 1506: 1505: 1496:. Archived from 1490: 1484: 1483: 1473: 1441: 1435: 1432: 1426: 1425: 1415: 1383: 1377: 1376: 1348: 1342: 1335: 1329: 1328: 1318: 1286: 1280: 1279: 1251: 1245: 1244: 1234: 1224: 1200: 1194: 1183: 1177: 1176: 1174: 1172: 1149: 1143: 1142: 1140: 1138: 1115: 1109: 1108: 1106: 1104: 1088: 1082: 1081: 1071: 1039: 670:neurotransmitter 639:like, including 620:sodium symporter 618:Neurotransmitter 586:carrier proteins 560:ABC transporters 261:NMR spectroscopy 249:Membrane protein 91:peptide sequence 21: 1998: 1997: 1993: 1992: 1991: 1989: 1988: 1987: 1973: 1972: 1971: 1966: 1900: 1864: 1832:Membrane lipids 1826: 1820: 1790: 1760: 1759: 1755: 1709: 1708: 1704: 1663:(8): e0182016. 1650: 1649: 1645: 1599: 1598: 1594: 1578:10.1.1.134.7424 1562: 1561: 1557: 1533:10.1.1.332.4023 1517: 1516: 1512: 1503: 1501: 1492: 1491: 1487: 1443: 1442: 1438: 1433: 1429: 1385: 1384: 1380: 1350: 1349: 1345: 1336: 1332: 1288: 1287: 1283: 1253: 1252: 1248: 1202: 1201: 1197: 1184: 1180: 1170: 1168: 1166: 1151: 1150: 1146: 1136: 1134: 1132: 1117: 1116: 1112: 1102: 1100: 1090: 1089: 1085: 1041: 1040: 1036: 1032: 1010: 973: 791: 724:T cell receptor 719: 696: 633: 579: 539: 526: 479: 434: 429: 423: 406: 378: 333:disulfide bonds 307: 302: 296:Protein folding 294:Main articles: 292: 238: 197: 191: 152:outer membranes 124: 119: 99:hydropathy plot 28: 23: 22: 15: 12: 11: 5: 1996: 1994: 1986: 1985: 1975: 1974: 1968: 1967: 1965: 1964: 1959: 1957:Phycobilisomes 1954: 1949: 1944: 1939: 1934: 1929: 1924: 1919: 1917:Cell junctions 1914: 1908: 1906: 1902: 1901: 1899: 1898: 1889: 1880: 1874: 1872: 1866: 1865: 1863: 1862: 1857: 1852: 1847: 1842: 1836: 1834: 1828: 1827: 1821: 1819: 1818: 1811: 1804: 1796: 1789: 1788: 1769:(5): 1369–81. 1753: 1702: 1643: 1592: 1555: 1526:(1): 125–140. 1510: 1485: 1456:(5): 581–586. 1436: 1427: 1398:(2): 117–125. 1378: 1343: 1330: 1281: 1246: 1195: 1178: 1164: 1144: 1130: 1110: 1083: 1054:(7): 939–944. 1033: 1031: 1028: 1027: 1026: 1021: 1016: 1009: 1006: 1005: 1004: 990: 984: 972: 969: 954: 953: 948:porin family ( 943: 926: 908: 898: 888: 874: 860: 846: 836: 835: 834: 828: 823: 817: 811: 805: 790: 787: 786: 785: 780: 774: 769: 764: 758: 752: 747: 740: 734: 727: 718: 715: 714: 713: 710:Disulfide bond 707: 702: 695: 692: 691: 690: 687: 682: 677: 663: 658: 653: 648: 632: 629: 628: 627: 624: 621: 615: 612: 609: 595: 588: 578: 575: 574: 573: 562: 557: 547: 544:calcium ATPase 538: 535: 534: 533: 525: 522: 521: 520: 507: 478: 475: 474: 473: 460: 449: 433: 430: 422: 419: 405: 402: 377: 374: 346:unfolded state 341:unfolded state 329:molten globule 306: 303: 291: 288: 237: 234: 221:cell membranes 193:Main article: 190: 187: 123: 120: 118: 115: 26: 24: 14: 13: 10: 9: 6: 4: 3: 2: 1995: 1984: 1981: 1980: 1978: 1963: 1960: 1958: 1955: 1953: 1950: 1948: 1945: 1943: 1942:Myelin sheath 1940: 1938: 1935: 1933: 1930: 1928: 1925: 1923: 1920: 1918: 1915: 1913: 1910: 1909: 1907: 1903: 1897: 1893: 1890: 1888: 1884: 1881: 1879: 1876: 1875: 1873: 1871: 1867: 1861: 1858: 1856: 1855:Sphingolipids 1853: 1851: 1848: 1846: 1845:Phospholipids 1843: 1841: 1840:Lipid bilayer 1838: 1837: 1835: 1833: 1829: 1825: 1824:cell membrane 1817: 1812: 1810: 1805: 1803: 1798: 1797: 1794: 1784: 1780: 1776: 1772: 1768: 1764: 1757: 1754: 1749: 1745: 1741: 1737: 1733: 1729: 1725: 1721: 1717: 1713: 1706: 1703: 1698: 1694: 1689: 1684: 1679: 1674: 1670: 1666: 1662: 1658: 1654: 1647: 1644: 1639: 1635: 1630: 1625: 1620: 1615: 1611: 1607: 1603: 1596: 1593: 1588: 1584: 1579: 1574: 1570: 1566: 1559: 1556: 1551: 1547: 1543: 1539: 1534: 1529: 1525: 1521: 1514: 1511: 1500:on 2013-12-25 1499: 1495: 1489: 1486: 1481: 1477: 1472: 1467: 1463: 1459: 1455: 1451: 1447: 1440: 1437: 1431: 1428: 1423: 1419: 1414: 1409: 1405: 1401: 1397: 1393: 1389: 1382: 1379: 1374: 1370: 1366: 1362: 1358: 1354: 1347: 1344: 1340: 1334: 1331: 1326: 1322: 1317: 1312: 1308: 1304: 1300: 1296: 1292: 1285: 1282: 1277: 1273: 1269: 1265: 1261: 1257: 1250: 1247: 1242: 1238: 1233: 1228: 1223: 1218: 1214: 1210: 1206: 1199: 1196: 1192: 1188: 1182: 1179: 1167: 1161: 1157: 1156: 1148: 1145: 1133: 1127: 1123: 1122: 1114: 1111: 1098: 1094: 1087: 1084: 1079: 1075: 1070: 1065: 1061: 1057: 1053: 1049: 1045: 1038: 1035: 1029: 1025: 1022: 1020: 1017: 1015: 1012: 1011: 1007: 1002: 998: 994: 991: 988: 985: 982: 978: 975: 974: 970: 968: 967: 963: 959: 951: 947: 944: 942: 938: 934: 930: 927: 924: 921:), including 920: 916: 912: 909: 906: 902: 899: 896: 892: 889: 886: 882: 878: 875: 872: 868: 864: 861: 858: 854: 850: 847: 844: 840: 837: 832: 829: 827: 824: 821: 818: 815: 812: 809: 806: 803: 800: 799: 797: 793: 792: 788: 784: 781: 778: 775: 773: 770: 768: 765: 762: 759: 756: 753: 751: 748: 745: 741: 738: 735: 732: 729:Cytochrome c 728: 725: 721: 720: 716: 711: 708: 706: 703: 701: 698: 697: 693: 688: 686: 683: 681: 678: 675: 671: 667: 664: 662: 659: 657: 654: 652: 649: 646: 642: 638: 635: 634: 630: 625: 622: 619: 616: 613: 610: 607: 603: 599: 596: 593: 589: 587: 584: 583:Mitochondrial 581: 580: 576: 571: 567: 563: 561: 558: 556: 552: 551:phospholamban 548: 545: 541: 540: 536: 532: 528: 527: 523: 519: 515: 511: 508: 505: 501: 497: 493: 489: 485: 481: 480: 476: 472: 468: 464: 461: 458: 454: 450: 447: 443: 439: 436: 435: 431: 428: 421:3D structures 420: 418: 416: 412: 403: 401: 399: 395: 391: 387: 383: 375: 373: 371: 367: 363: 359: 355: 351: 347: 343: 342: 336: 334: 330: 326: 322: 318: 314: 313:alpha-helical 311: 310:Transmembrane 304: 301: 297: 289: 287: 284: 280: 278: 274: 270: 266: 262: 258: 254: 250: 242: 235: 228: 224: 222: 218: 214: 210: 206: 205:lipid bilayer 202: 196: 188: 186: 184: 180: 176: 172: 167: 165: 161: 157: 153: 149: 145: 141: 137: 133: 129: 128:alpha-helical 121: 116: 114: 112: 108: 104: 100: 96: 92: 87: 85: 81: 77: 73: 69: 65: 61: 60:cell membrane 57: 54:is a type of 53: 45: 41: 37: 32: 19: 1886: 1850:Lipoproteins 1766: 1763:J. Mol. Biol 1762: 1756: 1715: 1711: 1705: 1660: 1656: 1646: 1609: 1605: 1595: 1571:(1): 21–35. 1568: 1564: 1558: 1523: 1519: 1513: 1502:. Retrieved 1498:the original 1488: 1453: 1449: 1439: 1430: 1395: 1391: 1381: 1359:(3): 87–93. 1356: 1353:FEBS Letters 1352: 1346: 1338: 1333: 1298: 1294: 1284: 1259: 1256:Biochemistry 1255: 1249: 1212: 1208: 1198: 1193:, and others 1191:lipoproteins 1189:and certain 1181: 1169:. Retrieved 1154: 1147: 1135:. Retrieved 1120: 1113: 1101:. Retrieved 1096: 1086: 1051: 1047: 1037: 1000: 996: 980: 961: 957: 955: 949: 932: 918: 904: 894: 884: 870: 856: 851:, including 842: 795: 722:Subunits of 518:mitochondria 471:chloroplasts 457:photosystems 410: 407: 397: 389: 381: 379: 354:denaturation 345: 339: 337: 324: 317:denaturation 308: 281: 269:helix bundle 247: 236:3D structure 198: 171:gramicidin A 168: 160:chloroplasts 156:mitochondria 132:beta barrels 125: 88: 80:beta-barrels 51: 49: 1171:13 November 1137:24 November 966:beta-barrel 915:plug domain 879:, or sugar 737:Glycophorin 672:receptors ( 600:(multidrug 370:amphiphilic 273:beta barrel 109:are called 72:hydrophobic 1922:Glycocalyx 1504:2016-05-01 1103:31 October 1030:References 995:(octamer, 993:MspA porin 913:and their 877:Maltoporin 853:Fatty acid 742:Inovirus ( 680:Aquaporins 570:translocon 555:sarcolipin 451:Bacterial 444:(see also 425:See also: 415:chaperones 394:translocon 179:antibiotic 144:cell walls 76:detergents 1962:Porosomes 1573:CiteSeerX 1528:CiteSeerX 981:n=12,S=12 950:n=14,S=16 939:OmpT and 933:n=10,S=12 923:cobalamin 919:n=22,S=24 905:n=12,S=16 895:n=12,S=16 885:n=18,S=22 871:n=16,S=20 857:n=14,S=14 843:n=12,S=14 796:n=8, S=10 442:rhodopsin 358:detergent 111:monotopic 1977:Category 1748:22656813 1740:12459591 1697:28771529 1657:PLOS ONE 1638:22579045 1587:15130854 1550:17579561 1480:18674618 1422:20724162 1373:11532438 1325:31577299 1241:19678920 1209:BMC Biol 1078:22563521 1008:See also 937:protease 931:family ( 592:permease 564:General 514:bacteria 467:bacteria 459:I and II 398:in vitro 382:in vitro 350:micelles 1860:Sterols 1783:8126726 1720:Bibcode 1712:Science 1688:5542473 1665:Bibcode 1629:3641781 1471:2580798 1413:3161620 1303:Bibcode 1276:2482072 1232:2739160 1187:Stannin 1069:3341589 763:A and B 739:A dimer 733:complex 726:complex 694:Enzymes 542:P-type 531:ATPases 411:in vivo 390:In vivo 325:misfold 321:H-bonds 203:of the 44:β-sheet 40:α-helix 1781:  1746:  1738:  1695:  1685:  1636:  1626:  1585:  1575:  1548:  1530:  1478:  1468:  1420:  1410:  1371:  1323:  1274:  1239:  1229:  1215:: 50. 1162:  1128:  1076:  1066:  1001:n=S=14 997:n=S=16 956:Note: 881:porins 867:porins 833:(NspA) 822:(PagP) 816:(OmpW) 810:(OmpX) 804:(OmpA) 647:Kirbac 602:efflux 568:(Sec) 502:. See 344:. The 177:as an 1905:Other 1744:S2CID 750:Pilin 512:from 465:from 446:opsin 217:lumen 215:(ER) 117:Types 1779:PMID 1736:PMID 1693:PMID 1634:PMID 1606:Cell 1583:PMID 1546:PMID 1476:PMID 1418:PMID 1369:PMID 1321:PMID 1272:PMID 1237:PMID 1173:2010 1160:ISBN 1139:2010 1126:ISBN 1105:2023 1074:PMID 960:and 553:and 516:and 469:and 455:and 298:and 271:and 158:and 130:and 89:The 1771:doi 1767:236 1728:doi 1716:298 1683:PMC 1673:doi 1624:PMC 1614:doi 1610:149 1538:doi 1466:PMC 1458:doi 1408:PMC 1400:doi 1361:doi 1357:504 1311:doi 1264:doi 1227:PMC 1217:doi 1064:PMC 1056:doi 668:of 366:SDS 364:in 259:or 154:of 146:of 1979:: 1777:. 1765:. 1742:. 1734:. 1726:. 1714:. 1691:. 1681:. 1671:. 1661:12 1659:. 1655:. 1632:. 1622:. 1608:. 1604:. 1581:. 1567:. 1544:. 1536:. 1524:76 1522:. 1474:. 1464:. 1454:18 1452:. 1448:. 1416:. 1406:. 1396:36 1394:. 1390:. 1367:. 1355:. 1319:. 1309:. 1299:21 1297:. 1293:. 1270:. 1260:28 1258:. 1235:. 1225:. 1211:. 1207:. 1095:. 1072:. 1062:. 1050:. 1046:. 494:; 388:. 255:, 150:, 142:, 86:. 50:A 1894:/ 1885:/ 1815:e 1808:t 1801:v 1785:. 1773:: 1750:. 1730:: 1722:: 1699:. 1675:: 1667:: 1640:. 1616:: 1589:. 1569:1 1552:. 1540:: 1507:. 1482:. 1460:: 1424:. 1402:: 1375:. 1363:: 1327:. 1313:: 1305:: 1278:. 1266:: 1243:. 1219:: 1213:7 1175:. 1141:. 1107:. 1080:. 1058:: 1052:3 983:) 979:( 962:S 958:n 952:) 907:) 903:( 897:) 893:( 887:) 883:( 873:) 869:( 859:) 845:) 841:( 779:. 676:) 608:) 506:. 448:) 38:( 20:)

Index

Integral polytopic protein

single-pass membrane protein
α-helix
β-sheet
integral membrane protein
cell membrane
gateways to permit the transport
conformational changes
hydrophobic
detergents
beta-barrels
denaturing agents
peptide sequence
transmembrane segment
hydropathy plot
single-pass membrane proteins
membrane proteins
monotopic
alpha-helical
beta barrels
bacterial outer membrane
gram-negative bacteria
cell walls
gram-positive bacteria
outer membranes
mitochondria
chloroplasts
pore-forming toxins
gramicidin A

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