Knowledge

Iron-responsive element-binding protein

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Transferrin receptor production depends on a similar mechanism. But this one has the opposite trigger, and the opposite ultimate effect. IRE-BPs without iron bind to the IREs on transferrin receptor mRNA. But those IREs have a different effect: When the IRE-BP binds to these sites, the binding not
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and for ferritin. Iron-responsive element-binding protein (IRE-BP) binds to these mRNA sequences. On its own, the IRE-BP binds to the IREs of ferritin and transferrin receptor mRNA. But, when iron binds to the IRE-BP, the IRE-BP changes shape with the result that the IRE-BPs can no longer bind the
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In low-iron conditions, IRE-BPs allow the cell to keep producing transferrin receptors. And more transferrin receptors make it easier for the cell to bring in more iron from transferrin-iron complexes circulating outside the cell. But, as iron binds to more and more IRE-BPs, they change shape and
394:, more commonly known as a rabbit. This protein has a couple of conformational changes associated with it to explain the alternative functions as either mRNA regulator or as an enzyme. This information was obtained from the RCSB protein data bank website. 400:
is less abundant than IRP1 in most cells. The strongest expression is in intestine and brain. Relative to IRP1, IRP2 has a 73-amino acid insertion, and this insertion mediates the IRP2 degradation in iron-replete cells. IRP2 is regulated by the F-Box
376:, is a bifunctional protein that functions as an iron-responsive element (IRE)-binding protein involved in the control of iron metabolism by binding mRNA to repress translation or degradation. It functions also as the cytoplasmic isoform of 453:
ferritin mRNA. This liberates the mRNA to direct the cell to make more ferritin. In other words, when there is high iron in the cell, the iron itself causes the cell to produce more iron storage molecules. (The IRE-BP is an
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unbind the transferrin receptor mRNA. The transferrin receptor mRNA is rapidly degraded without the IRE-BP attached to it. The cell stops producing transferrin receptors.
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molecules, more and more iron will bind to the IRE-BPs. That will stop transferrin receptor production. And iron-IRE-BP binding will also start ferritin production.
796:"Molecular characterization of a second iron-responsive element-binding protein, iron regulatory protein 2. Structure, function, and post-translational regulation" 217: 68: 878: 417:. Since iron is tightly bound to transferrin, cells throughout the body have receptors for transferrin-iron complexes on their surfaces. These receptors 428:
Cells have advanced mechanisms for sensing their own need for iron. In human cells, the best-characterized iron-sensing mechanism is the result of
1289: 1817: 1812: 840:"RCSB Protein Data Bank - Structure Summary for 2IPY - crystal structure of iron regulatory protein 1 in complex with ferritin H IRE-RNA" 483:
When the cell is low on iron, less and less iron will bind to IRE-BPs. The IRE-BPs without iron will bind to transferrin receptor mRNA.
241: 92: 380:. Aconitases are iron-sulfur proteins that require a 4Fe-4S cluster for their enzymatic activity, in which they catalyze conversion of 606:"Molecular control of vertebrate iron metabolism: mRNA-based regulatory circuits operated by iron, nitric oxide, and oxidative stress" 1282: 1511: 229: 80: 388:. This structure was based on x-ray crystal diffraction. The resolution was 2.80 Ă…. This protein was harvested from the species 1473: 1218: 222: 1376: 871: 1667: 73: 1406: 1396: 418: 1386: 1371: 846: 519:"Iron regulatory protein prevents binding of the 43S translation pre-initiation complex to ferritin and eALAS mRNAs" 1782: 1652: 1768: 1755: 1742: 1729: 1716: 1703: 1690: 1464: 1445: 1421: 1323: 864: 755:"Iron regulates cytoplasmic levels of a novel iron-responsive element-binding protein without aconitase activity" 1662: 1616: 1559: 1391: 1310: 1254: 850: 133: 1564: 1259: 492: 441: 354: 665:"Characterization of a second RNA-binding protein in rodents with specificity for iron-responsive elements" 1121: 891: 429: 1274: 569:
Eisenstein RS (2000). "Iron regulatory proteins and the molecular control of mammalian iron metabolism".
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only allows for translation but also stabilizes the mRNA molecule so it can stay intact for longer.
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which activate the ubiquitination and then the degradation of IRP2. IRP2 has no aconitase activity.
1621: 1478: 1381: 1367: 706:"Requirements for iron-regulated degradation of the RNA binding protein, iron regulatory protein 2" 1554: 1454: 1335: 1246: 795: 754: 664: 1822: 1430: 1411: 1192: 839: 817: 776: 735: 686: 645: 586: 548: 1600: 1595: 1569: 1497: 1108: 899: 807: 766: 725: 717: 676: 635: 625: 578: 538: 530: 291: 282: 145: 154: 1647: 1631: 1544: 1200: 1146: 982: 421:
both the protein and the iron attached to it. Once inside, the cell transfers the iron to
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Samaniego F, Chin J, Iwai K, Rouault TA, Klausner RD (December 1994).
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When the cell has obtained more iron than it can bind up with
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All cells use some iron, and must get it from the circulating
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(Aug 1994). 509: 18:Iron-responsive element binding protein 425:, the internal iron storage molecule. 195: 29: 7: 722:10.1002/j.1460-2075.1995.tb00219.x 604:Hentze MW, KĂĽhn LC (August 1996). 535:10.1002/j.1460-2075.1994.tb06699.x 25: 1790: 444:(IREs) are contained within the 1474:Carboxymethyloxysuccinate lyase 1219:Phosphoric acids and phosphates 1377:Methylglutaconyl-CoA hydratase 1: 1407:Uroporphyrinogen III synthase 1397:3-Isopropylmalate dehydratase 952:Ferroportin (SLC11A3/SLC40A1) 813:10.1016/S0021-9258(18)47367-X 772:10.1016/S0021-9258(19)51075-4 682:10.1016/S0021-9258(19)74253-7 583:10.1146/annurev.nutr.20.1.627 1818:Genes on human chromosome 15 610:Proc. Natl. Acad. Sci. U.S.A 357:(IREs) in the regulation of 1813:Genes on human chromosome 9 1424:: Acting on polysaccharides 1387:Cystathionine beta synthase 1372:3-Hydroxyacyl ACP dehydrase 1839: 1668:Michaelis–Menten kinetics 1045: 298: 161: 37: 1560:Diffusion-limited enzyme 1392:Porphobilinogen synthase 1255:Calcium-sensing receptor 1002:Calreticulin/mobilferrin 851:Medical Subject Headings 448:sequences that code for 442:iron-responsive elements 355:iron-responsive elements 1260:Calcium-binding protein 631:10.1073/pnas.93.16.8175 33:Iron Regulatory Protein 1448:: Acting on phosphates 419:engulf and internalize 1653:Eadie–Hofstee diagram 1586:Allosteric regulation 1237:Magnesium transporter 1028:Iron-binding proteins 992:Duodenal cytochrome B 450:transferrin receptors 391:Oryctolagus cuniculus 359:human iron metabolism 1663:Lineweaver–Burk plot 1229:Magnesium metabolism 1211:Phosphate metabolism 961:Transferrin receptor 430:post-transcriptional 1479:Hydroperoxide lyase 1382:Tryptophan synthase 1368:Enoyl-CoA hydratase 622:1996PNAS...93.8175H 1622:Enzyme superfamily 1555:Enzyme promiscuity 1455:Threonine synthase 1336:Carbonic anhydrase 1247:Calcium metabolism 1778: 1777: 1487: 1486: 1431:Hyaluronate lyase 1412:Nitrile hydratase 1272: 1271: 1268: 1267: 1193:Sodium metabolism 1178: 1177: 1109:Copper metabolism 1103: 1102: 1099: 1098: 1015: 1014: 529:(16): 3882–3891. 331: 330: 327: 326: 194: 193: 190: 189: 16:(Redirected from 1830: 1795: 1794: 1786: 1658:Hanes–Woolf plot 1601:Enzyme activator 1596:Enzyme inhibitor 1570:Enzyme catalysis 1514: 1507: 1500: 1491: 1313:4.2) (primarily 1299: 1292: 1285: 1276: 1189: 1024: 925: 914: 905: 900:Transition metal 892:Metal metabolism 881: 874: 867: 858: 843: 826: 825: 815: 806:(49): 30904–10. 791: 785: 784: 774: 765:(39): 24252–60. 750: 744: 743: 733: 701: 695: 694: 684: 675:(36): 27327–34. 660: 654: 653: 643: 633: 601: 595: 594: 566: 557: 556: 546: 514: 337:, also known as 300: 196: 163: 42: 30: 21: 1838: 1837: 1833: 1832: 1831: 1829: 1828: 1827: 1803: 1802: 1801: 1789: 1781: 1779: 1774: 1686:Oxidoreductases 1672: 1648:Enzyme kinetics 1636: 1632:List of enzymes 1605: 1574: 1545:Catalytic triad 1523: 1518: 1488: 1483: 1459: 1440: 1416: 1318: 1303: 1273: 1264: 1241: 1223: 1205: 1174: 1147:Zinc metabolism 1141: 1095: 1041: 1011: 983:Iron(III) oxide 977: 919: 909:Iron metabolism 894: 885: 838: 835: 830: 829: 793: 792: 788: 752: 751: 747: 703: 702: 698: 662: 661: 657: 616:(16): 8175–82. 603: 602: 598: 571:Annu. Rev. Nutr 568: 567: 560: 516: 515: 511: 506: 489: 411: 367: 28: 23: 22: 15: 12: 11: 5: 1836: 1834: 1826: 1825: 1820: 1815: 1805: 1804: 1800: 1799: 1776: 1775: 1773: 1772: 1759: 1746: 1733: 1720: 1707: 1694: 1680: 1678: 1674: 1673: 1671: 1670: 1665: 1660: 1655: 1650: 1644: 1642: 1638: 1637: 1635: 1634: 1629: 1624: 1619: 1613: 1611: 1610:Classification 1607: 1606: 1604: 1603: 1598: 1593: 1588: 1582: 1580: 1576: 1575: 1573: 1572: 1567: 1562: 1557: 1552: 1547: 1542: 1537: 1531: 1529: 1525: 1524: 1519: 1517: 1516: 1509: 1502: 1494: 1485: 1484: 1482: 1481: 1476: 1470: 1468: 1461: 1460: 1458: 1457: 1451: 1449: 1442: 1441: 1439: 1438: 1433: 1427: 1425: 1418: 1417: 1415: 1414: 1409: 1404: 1399: 1394: 1389: 1384: 1379: 1374: 1365: 1364: 1363: 1358: 1348: 1343: 1338: 1332: 1330: 1320: 1319: 1305:Carbon–oxygen 1304: 1302: 1301: 1294: 1287: 1279: 1270: 1269: 1266: 1265: 1263: 1262: 1257: 1251: 1249: 1243: 1242: 1240: 1239: 1233: 1231: 1225: 1224: 1222: 1221: 1215: 1213: 1207: 1206: 1204: 1203: 1197: 1195: 1186: 1180: 1179: 1176: 1175: 1173: 1172: 1167: 1162: 1157: 1151: 1149: 1143: 1142: 1140: 1139: 1134: 1129: 1124: 1119: 1113: 1111: 1105: 1104: 1101: 1100: 1097: 1096: 1094: 1093: 1088: 1083: 1078: 1073: 1072: 1071: 1061: 1056: 1046: 1043: 1042: 1040: 1039: 1033: 1031: 1021: 1017: 1016: 1013: 1012: 1010: 1009: 1004: 999: 994: 988: 986: 979: 978: 976: 975: 974: 973: 968: 954: 945: 940: 938:DMT1 (SLC11A2) 934: 932: 929:Iron(II) oxide 922: 911: 902: 896: 895: 886: 884: 883: 876: 869: 861: 855: 854: 844: 834: 833:External links 831: 828: 827: 786: 745: 716:(21): 5350–7. 696: 655: 596: 558: 508: 507: 505: 502: 501: 500: 495: 488: 485: 432:regulation of 410: 409:Iron transport 407: 366: 363: 329: 328: 325: 324: 319: 315: 314: 309: 305: 304: 296: 295: 285: 279: 278: 274: 273: 268: 262: 261: 256: 250: 249: 244: 238: 237: 232: 226: 225: 220: 214: 213: 210: 206: 205: 201: 200: 192: 191: 188: 187: 182: 178: 177: 172: 168: 167: 159: 158: 148: 142: 141: 136: 130: 129: 125: 124: 119: 113: 112: 107: 101: 100: 95: 89: 88: 83: 77: 76: 71: 65: 64: 61: 57: 56: 53: 49: 48: 44: 43: 35: 34: 27:Protein family 26: 24: 14: 13: 10: 9: 6: 4: 3: 2: 1835: 1824: 1821: 1819: 1816: 1814: 1811: 1810: 1808: 1798: 1793: 1788: 1784: 1770: 1766: 1765: 1760: 1757: 1753: 1752: 1747: 1744: 1740: 1739: 1734: 1731: 1727: 1726: 1721: 1718: 1714: 1713: 1708: 1705: 1701: 1700: 1695: 1692: 1688: 1687: 1682: 1681: 1679: 1675: 1669: 1666: 1664: 1661: 1659: 1656: 1654: 1651: 1649: 1646: 1645: 1643: 1639: 1633: 1630: 1628: 1627:Enzyme family 1625: 1623: 1620: 1618: 1615: 1614: 1612: 1608: 1602: 1599: 1597: 1594: 1592: 1591:Cooperativity 1589: 1587: 1584: 1583: 1581: 1577: 1571: 1568: 1566: 1563: 1561: 1558: 1556: 1553: 1551: 1550:Oxyanion hole 1548: 1546: 1543: 1541: 1538: 1536: 1533: 1532: 1530: 1526: 1522: 1515: 1510: 1508: 1503: 1501: 1496: 1495: 1492: 1480: 1477: 1475: 1472: 1471: 1469: 1466: 1462: 1456: 1453: 1452: 1450: 1447: 1443: 1437: 1434: 1432: 1429: 1428: 1426: 1423: 1419: 1413: 1410: 1408: 1405: 1403: 1400: 1398: 1395: 1393: 1390: 1388: 1385: 1383: 1380: 1378: 1375: 1373: 1369: 1366: 1362: 1359: 1357: 1354: 1353: 1352: 1349: 1347: 1344: 1342: 1339: 1337: 1334: 1333: 1331: 1329: 1325: 1321: 1316: 1312: 1308: 1300: 1295: 1293: 1288: 1286: 1281: 1280: 1277: 1261: 1258: 1256: 1253: 1252: 1250: 1248: 1244: 1238: 1235: 1234: 1232: 1230: 1226: 1220: 1217: 1216: 1214: 1212: 1208: 1202: 1199: 1198: 1196: 1194: 1190: 1187: 1185: 1181: 1171: 1168: 1166: 1163: 1161: 1158: 1156: 1153: 1152: 1150: 1148: 1144: 1138: 1135: 1133: 1130: 1128: 1127:Ceruloplasmin 1125: 1123: 1120: 1118: 1115: 1114: 1112: 1110: 1106: 1092: 1089: 1087: 1084: 1082: 1079: 1077: 1076:Ceruloplasmin 1074: 1070: 1067: 1066: 1065: 1062: 1060: 1057: 1055: 1051: 1048: 1047: 1044: 1038: 1035: 1034: 1032: 1029: 1025: 1022: 1018: 1008: 1005: 1003: 1000: 998: 995: 993: 990: 989: 987: 984: 980: 972: 969: 967: 964: 963: 962: 958: 955: 953: 949: 946: 944: 941: 939: 936: 935: 933: 930: 926: 923: 921: 918:Absorption in 915: 912: 910: 906: 903: 901: 897: 893: 889: 882: 877: 875: 870: 868: 863: 862: 859: 852: 848: 845: 841: 837: 836: 832: 823: 819: 814: 809: 805: 801: 800:J. Biol. Chem 797: 790: 787: 782: 778: 773: 768: 764: 760: 759:J. Biol. Chem 756: 749: 746: 741: 737: 732: 727: 723: 719: 715: 711: 707: 700: 697: 692: 688: 683: 678: 674: 670: 669:J. Biol. Chem 666: 659: 656: 651: 647: 642: 637: 632: 627: 623: 619: 615: 611: 607: 600: 597: 592: 588: 584: 580: 576: 572: 565: 563: 559: 554: 550: 545: 540: 536: 532: 528: 524: 520: 513: 510: 503: 499: 496: 494: 491: 490: 486: 484: 481: 479: 475: 470: 466: 462: 460: 456: 451: 447: 443: 439: 435: 431: 426: 424: 420: 416: 408: 406: 404: 399: 395: 393: 392: 387: 383: 379: 375: 371: 364: 362: 360: 356: 352: 348: 344: 340: 336: 323: 320: 316: 313: 310: 306: 301: 297: 294: 293: 289: 286: 284: 280: 275: 272: 269: 267: 263: 260: 257: 255: 251: 248: 245: 243: 239: 236: 233: 231: 227: 224: 221: 219: 215: 211: 207: 202: 197: 186: 183: 179: 176: 173: 169: 164: 160: 157: 156: 152: 149: 147: 143: 140: 137: 135: 131: 126: 123: 120: 118: 114: 111: 108: 106: 102: 99: 96: 94: 90: 87: 84: 82: 78: 75: 72: 70: 66: 62: 58: 54: 50: 45: 41: 36: 31: 19: 1764:Translocases 1761: 1748: 1735: 1722: 1709: 1699:Transferases 1696: 1683: 1540:Binding site 1436:Pectin lyase 1328:Hydro-Lyases 1315:dehydratases 1063: 803: 799: 789: 762: 758: 748: 713: 709: 699: 672: 668: 658: 613: 609: 599: 574: 570: 526: 522: 512: 482: 471: 467: 463: 427: 412: 397: 396: 389: 373: 369: 368: 350: 346: 342: 338: 334: 332: 290: 153: 60:Alt. symbols 1535:Active site 1201:Na/K-ATPase 1184:Electrolyte 1091:Lactoferrin 1086:Hemosiderin 1059:Hemojuvelin 957:Transferrin 312:Swiss-model 204:Identifiers 175:Swiss-model 47:Identifiers 1807:Categories 1738:Isomerases 1712:Hydrolases 1579:Regulation 948:Hephaestin 888:Metabolism 577:: 627–62. 504:References 386:isocitrate 353:, bind to 308:Structures 303:Search for 277:Other data 171:Structures 166:Search for 128:Other data 1617:EC number 1402:Urocanase 1361:Enolase 2 1346:Aconitase 1069:Aconitase 498:Aconitase 455:aconitase 378:aconitase 259:NM_004136 218:NCBI gene 134:EC number 110:NM_002197 69:NCBI gene 1823:EC 4.2.1 1641:Kinetics 1565:Cofactor 1528:Activity 1341:Fumarase 1050:Hepcidin 1037:Ferritin 1007:Ferritin 997:Integrin 943:Ferritin 920:duodenum 591:10940348 487:See also 474:ferritin 459:see here 423:ferritin 365:Function 322:InterPro 185:InterPro 1797:Biology 1751:Ligases 1521:Enzymes 1467:: Other 1351:Enolase 1170:SLC39A4 1165:SLC30A1 1132:SLC31A1 822:7983023 781:7523370 740:7489724 691:8262972 650:8710843 618:Bibcode 553:8070415 382:citrate 318:Domains 288:Chr. 15 266:UniProt 181:Domains 139:4.2.1.3 117:UniProt 1783:Portal 1725:Lyases 1465:4.2.99 1307:lyases 853:(MeSH) 820:  779:  738:  731:394644 728:  710:EMBO J 689:  648:  638:  589:  551:  544:395301 541:  523:EMBO J 339:IRE-BP 271:P48200 254:RefSeq 247:147582 209:Symbol 151:Chr. 9 122:P21399 105:RefSeq 98:100880 52:Symbol 1677:Types 1446:4.2.3 1422:4.2.2 1356:Alpha 1324:4.2.1 1137:ATOX1 1122:ATP7B 1117:ATP7A 1020:Other 641:38642 438:genes 415:blood 403:FBXL5 372:, or 292:q25.1 283:Locus 212:IREB2 155:p21.1 146:Locus 63:IREB1 1769:list 1762:EC7 1756:list 1749:EC6 1743:list 1736:EC5 1730:list 1723:EC4 1717:list 1710:EC3 1704:list 1697:EC2 1691:list 1684:EC1 1160:TMC8 1155:TMC6 1054:HAMP 971:TFR2 966:TFR1 818:PMID 777:PMID 736:PMID 687:PMID 646:PMID 587:PMID 549:PMID 478:heme 446:mRNA 434:mRNA 398:IRP2 374:IRP1 370:ACO1 349:and 343:IRBP 333:The 242:OMIM 235:6115 230:HGNC 223:3658 93:OMIM 81:HGNC 55:ACO1 1081:HFE 959:to 808:doi 804:269 767:doi 763:269 726:PMC 718:doi 677:doi 673:268 636:PMC 626:doi 579:doi 539:PMC 531:doi 493:IRE 476:or 461:). 384:to 351:IFR 347:IRP 86:117 1809:: 1326:: 1311:EC 890:: 816:. 802:. 798:. 775:. 761:. 757:. 734:. 724:. 714:14 712:. 708:. 685:. 671:. 667:. 644:. 634:. 624:. 614:93 612:. 608:. 585:. 575:20 573:. 561:^ 547:. 537:. 527:13 525:. 521:. 361:. 345:, 341:, 74:48 1785:: 1771:) 1767:( 1758:) 1754:( 1745:) 1741:( 1732:) 1728:( 1719:) 1715:( 1706:) 1702:( 1693:) 1689:( 1513:e 1506:t 1499:v 1370:/ 1317:) 1309:( 1298:e 1291:t 1284:v 1052:/ 1030:: 985:: 950:/ 931:: 880:e 873:t 866:v 842:. 824:. 810:: 783:. 769:: 742:. 720:: 693:. 679:: 652:. 628:: 620:: 593:. 581:: 555:. 533:: 20:)

Index

Iron-responsive element binding protein

NCBI gene
48
HGNC
117
OMIM
100880
RefSeq
NM_002197
UniProt
P21399
EC number
4.2.1.3
Locus
Chr. 9
p21.1
Swiss-model
InterPro
NCBI gene
3658
HGNC
6115
OMIM
147582
RefSeq
NM_004136
UniProt
P48200
Locus

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