233:, and created Cyber Paint for that machine. Cyber Paint was a 2D animation program that brought together a wide variety of animation and paint functionality and the delta-compressed animation format developed for CAD-3D. The user could move freely between animation frames and paint arbitrarily, or utilize various animation tools for automatic tweening movement across frames. Cyber Paint was one of the first, if not the first, consumer program that enabled the user to paint across time in a compressed digital video format. Later he developed a similar program, the
42:
241:, where the image compression improved to the point it could play off of hard disk, and one could paint using "inks" that performed algorithmic transformations such as smoothing, transparency, and tiled patterns. The Autodesk Animator was used to create artwork for a wide variety of video games.
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to run the software. In contrast, Celera was using what was thought then to be one of the most powerful civilian supercomputers in the world. Kent's first assembly on the human genome was released on June 22. Celera finished its assembly three days later on June 25, and the dual results were
311:(BLAST-like alignment tool) and the UCSC Genome Browser to help analyze important genome data. Kent continues to work at UCSC primarily on web tools to help understand the human genome. He helps maintain and upgrade the browser, and has worked on
253:
to assemble and publish the first human genome sequence. His efforts were motivated by the research needs of himself and his colleagues, but also out of concern that the data might be made proprietary via patents by
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on June 26. On July 7, 2000, the Santa Cruz data was made publicly available on the World Wide Web while the research paper describing this publicly funded genome was published in
February 2001 special issue of
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home computer. This program combined polygon tweening in 3D with simple 2D cel-based animation. In 1985 he founded and ran a software company, Dancing Flame, which adapted the Aegis
Animator to the
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can be downloaded and read for free, and all of the software can be freely used for academic, nonprofit, and personal use, some of it requires a
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described Kent's work as "the most significant work of open source development in the past year". While all of Kent's genomics software is
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Kent began his programming career in 1983 with Island
Graphics Inc. where he wrote the Aegis Animator program for the
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In 2000, he wrote a program, GigAssembler, that allowed the publicly funded
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337:"Life, the Universe, and Everything: An Interview with David Haussler"
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462:"Assembly of the Working Draft of the Human Genome with GigAssembler"
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258:. In their close race with Celera, Kent and the UCSC Professor
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Kent WJ, Baertsch R, Hinrichs A, Miller W, Haussler D (2003).
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Patching and painting the working draft of the human genome
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International Human Genome
Sequencing Consortium (2001).
536:"Initial sequencing and analysis of the human genome"
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American research scientist and computer programmer
510:"Jim Kent, hero of free and open source software"
879:International Society for Computational Biology
262:quickly built a modest cluster of 50 commodity
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193:database projects and the 2003 winner of the
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1057:University of California, Santa Cruz faculty
1052:University of California, Santa Cruz alumni
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307:After GigAssembler, Kent went on to write
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1062:People in the computer animation industry
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437:"Busting at the Seams: Autodesk Animator"
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245:Involvement with the Human Genome Project
181:(born February 10, 1960) is an American
102:Benjamin Franklin Award (Bioinformatics)
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672:"BLAT---The BLAST-Like Alignment Tool"
23:. For the New Zealand politician, see
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88:University of California, Santa Cruz
728:"The Human Genome Browser at UCSC"
588:"The sequence of the human genome"
387:"Aegis Animator ST and Art Pak ST"
14:
19:For the fictional character, see
1042:21st-century American biologists
837:O'Reilly Interview with Jim Kent
586:Venter, JC; et al. (2001).
1072:Human Genome Project scientists
189:. He has been a contributor to
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1047:American computer programmers
460:Kent WJ, Haussler D (2001).
435:Breton Slivka (2009-05-08).
354:10.1371/journal.pgen.1003282
268:Linux-based operating system
143:Other academic advisors
46:Photo courtesy of Jim Kent.
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1037:American bioinformaticians
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842:Wired article on Jim Kent
441:Bustingseams.blogspot.com
211:San Francisco, California
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781:Proc Natl Acad Sci U S A
802:10.1073/pnas.1932072100
616:10.1126/science.1058040
195:Benjamin Franklin Award
1077:Biologists from Hawaii
335:Gitschier, J. (2013).
296:in the sense that the
1067:Overton Prize winners
647:"Index of /~kent/src"
25:Jim Kent (politician)
21:Jim Kent (The Strain)
670:Kent, W. J. (2002).
313:comparative genomics
251:Human Genome Project
1006:Christophe Dessimoz
793:2003PNAS..10011484K
651:Hgwdev.cse.ucsc.edu
607:2001Sci...291.1304V
601:(5507): 1304–1351.
555:2001Natur.409..860L
187:computer programmer
982:Curtis Huttenhower
928:Mathieu Blanchette
391:Atarimagazines.com
264:personal computers
221:Computer animation
183:research scientist
179:William James Kent
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952:Steven E. Brenner
898:Christopher Burge
744:10.1101/gr.229102
688:10.1101/gr.229202
549:(6822): 860–921.
478:10.1101/gr.183201
271:announced at the
235:Autodesk Animator
205:Kent was born in
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109:Scientific career
62:February 10, 1960
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946:Trey Ideker
922:Ewan Birney
904:David Baker
720:Kent, W. J.
415:Ataricq.org
298:source code
294:open source
273:White House
76:Nationality
1021:Categories
976:Dana Pe'er
940:Aviv Regev
934:Eran Segal
656:2016-10-21
520:2010-09-19
446:2016-10-21
421:2016-10-21
396:2016-10-21
323:References
288:. In 2002
266:running a
201:Early life
58:1960-02-10
890:Laureates
319:Project.
916:Uri Alon
910:Jim Kent
821:14500911
762:12045153
726:(2002).
706:11932250
633:85981305
625:11181995
573:11237011
496:11544197
373:23382705
231:Atari ST
79:American
34:Jim Kent
881:(ISCB)
789:Bibcode
603:Bibcode
595:Science
551:Bibcode
364:3561096
302:license
285:Science
157:Website
896:2001
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317:ENCODE
279:Nature
207:Hawaii
191:genome
170:/~kent
127:(2002)
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116:Thesis
94:Awards
69:Hawaii
1004:2019
998:2018
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986:2016
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539:(PDF)
227:Amiga
166:.ucsc
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492:PMID
369:PMID
309:BLAT
237:for
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168:.edu
164:.soe
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Text is available under the Creative Commons Attribution-ShareAlike License. Additional terms may apply.
