Knowledge (XXG)

PDZ domain

Source đź“ť

1315: 1225: 842:. Proteins containing PDZ domains play a key role in anchoring receptor proteins in the membrane to cytoskeletal components. Proteins with these domains help hold together and organize signaling complexes at cellular membranes. These domains play a key role in the formation and function of signal transduction complexes. PDZ domains also play a highly significant role in the anchoring of 1351: 21: 958: 1015: 1176:
for degradation or recycled back to the cell membrane. Scientists have demonstrated that when the Ser-411 residue of the β2-AR PDZ binding domain, which interacts directly with EBP50, is phosphorylated, the receptor is degraded. If Ser-411 is left unmodified, the receptor is recycled. The role played
948:
wrote a letter of correction to Trends in Biomedical Sciences. Earlier that year, another set of scientists had claimed to discover a new protein domain which they called a DHR domain. Dr. Kennedy refuted that her lab had previously described exactly the same domain as a series of “GLGF repeats”. She
1086:
PDZ domains are directly involved in the regulation of different cellular pathways. This mechanism of this regulation varies as PDZ domains are able to interact with a range of cellular components. This regulation is usually a result of the co-localization of multiple signaling molecules such as in
1322:
PSD-95 is a brain synaptic protein with three PDZ domains, each with unique properties and structures that allow PSD-95 to function in many ways. In general, the first two PDZ domains interact with receptors and the third interacts with cytoskeleton-related proteins. The main receptors associated
1022:
The first discovered function of the PDZ domains was to anchor receptor proteins in the membrane to cytoskeletal components. PDZ domains also have regulatory functions on different signaling pathways. Any protein may have one or several PDZ domains, which can be identical or unique (see figure to
1156:
bind to receptor proteins and other signaling components. When the one of these PDZ domains is inhibited, the signaling pathways of the neurons are disrupted, resulting in auditory, visual, and vestibular impairment. This regulation is thought to be based on the physical positioning WHRN and the
1054:
at the synapse. PDZ domains are crucial to this receptor localization process. Proteins with PDZ domains generally associate with both the C-terminus of the receptor and cytoskeletal elements in order to anchor the receptor to the cytoskeleton and keep it in place. Without such an interaction,
1114:. Binding the PDZ domain of this phosphatase results in a loss of enzyme activity, which leads to apoptosis. The normal regulation of this enzyme prevents cells from prematurely going through apoptosis. When the regulation of the PTPN4 enzyme is lost, there is increased 1377:
system helped them discover that out of GRIP's seven PDZ domains, two (domains four and five) were essential for binding of GRIP to the AMPA subunit called GluR2. This interaction is vital for proper localization of AMPA receptors, which play a large part in
939:
and in cell signaling complexes. Since the discovery of PDZ domains more than 20 years ago, hundreds of additional PDZ domains have been identified. The first published use of the phrase “PDZ domain” was not in a paper, but a letter. In September 1995, Dr.
1023:
right). This variety allows these proteins to be very versatile in their interactions. Different PDZ domains in the same protein can have different roles, each binding a different part of the target protein or a different protein altogether.
1420:
There are roughly 260 PDZ domains in humans. Several proteins contain multiple PDZ domains, so the number of unique PDZ-containing proteins is closer to 180. In the table below are some of the better studied members of this family:
1042:. For cells to function properly it is important for components—proteins and other molecules— to be in the right place at the right time. Proteins with PDZ domains bind different components to ensure correct arrangements. In the 1180:
PDZ domains are being studied further to better understand the role they play in different signaling pathways. Research has increased as these domains have been linked to different diseases including cancer as discussed above.
1327:. The first two PDZ domains of PSD-95 bind to the C-terminus of NMDA receptors and anchor them in the membrane at the point of neurotransmitter release. The first two PDZ domains can also interact in a similar fashion with 4008:- An EU project to advance our understanding of the cellular signaling pathways and therapeutic potential of proteins comprising PDZ domains in healthy and pathological conditions such as cancer and neurological diseases. 1412:). The single GLGF repeat on HOMER binds amino acids on the C-terminus of mGluR5. HOMER expression is measured at high levels during embryologic stages in rats, suggesting an important developmental function. 914:
augmentation. This means that the beta sheet in the PDZ domain is extended by the addition of a further beta strand from the tail of the binding partner protein. The C-terminal carboxylate group is bound by a
949:
continued to explain that in order to “better reflect the origin and distribution of the domain,” the new title of the domain would be changed. Thus, the name “PDZ domain” was introduced to the world.
1217:, disrupting the normal binding patterns. The end result is a loss of PDZ domain function and further signaling. Another way phosphorylation can disrupt regular PDZ domain function is by altering the 3138:
Maisonneuve P, Caillet-Saguy C, Raynal B, Gilquin B, Chaffotte A, PĂ©rez J, et al. (November 2014). "Regulation of the catalytic activity of the human phosphatase PTPN4 by its PDZ domain".
1404:
differs significantly from many known PDZ proteins, including GRIP and PSD-95. Instead of mediating receptors near ion channels, as is the case with GRIP and PSD-95, HOMER is involved in
1283:
PDZ proteins are a family of proteins that contain the PDZ domain. This sequence of amino-acids is found in many thousands of known proteins. PDZ domain proteins are widespread in
3559:
van den Berk LC, Landi E, Walma T, Vuister GW, Dente L, Hendriks WJ (November 2007). "An allosteric intramolecular PDZ-PDZ interaction modulates PTP-BL PDZ2 binding specificity".
3230:
Cao TT, Deacon HW, Reczek D, Bretscher A, von Zastrow M (September 1999). "A kinase-regulated PDZ-domain interaction controls endocytic sorting of the beta2-adrenergic receptor".
1408:
signaling. Another unique aspect of HOMER is that it only contains a single PDZ domain, which mediates interactions between HOMER and type 5 metabotropic glutamate receptor (
1189:
PDZ domain function can be both inhibited and activated by various mechanisms. Two of the most prevalent include allosteric interactions and posttranslational modifications.
1263:. Different PDZ domains can even have this allosteric effect on each other. This PDZ-PDZ interaction only acts as an inhibitor. Other experiments have shown that certain 1003:
binding the C-terminal carboxylate of the protein or peptide ligand. Most PDZ domains have such a binding site located between one of the β-strands and the long α-helix.
1221:
and further affecting binding and signaling. In rare cases researchers have seen post-translational modifications activate PDZ domain activity but these cases are few.
2986:
Brakeman PR, Lanahan AA, O'Brien R, Roche K, Barnes CA, Huganir RL, Worley PF (March 1997). "Homer: a protein that selectively binds metabotropic glutamate receptors".
2649:
Cho KO, Hunt CA, Kennedy MB (November 1992). "The rat brain postsynaptic density fraction contains a homolog of the Drosophila discs-large tumor suppressor protein".
160: 3648:
Dong H, O'Brien RJ, Fung ET, Lanahan AA, Worley PF, Huganir RL (March 1997). "GRIP: a synaptic PDZ domain-containing protein that interacts with AMPA receptors".
1358:. 2010). Proteins are indicated by black lines scaled to the length of the primary sequence of the protein. Different shapes refer to different protein domains. 4033: 72: 1910: 1272: 1161: 1172:, thus serving as a link between the cytoskeleton and β2-AR. The β2-AR receptor is eventually endocytosed, where it will either be consigned to a 1034:
PDZ domains are found in diverse proteins, but all assist in localization of cellular elements. PDZ domains are primarily involved in anchoring
931:
PDZ is an acronym derived from the names of the first proteins in which the domain was observed. Post-synaptic density protein 95 (PSD-95) is a
4230: 1437: 1362: 96: 935:
protein found only in the brain. Drosophila disc large tumor suppressor (Dlg1) and zona occludens 1 (ZO-1) both play an important role at
4280: 1063: 1087:
the example with nNos and NMDA receptors. Some examples of signaling pathway regulation executed by the PDZ domain include phosphatase
1373:
between the C-termini of AMPA receptors and NMDA receptors, they attempted to determine if a similar PDZ interaction was occurring. A
945: 4225: 1409: 3919:"Crystal structures of a complexed and peptide-free membrane protein-binding domain: molecular basis of peptide recognition by PDZ" 3048:"Crystal structures of a complexed and peptide-free membrane protein-binding domain: molecular basis of peptide recognition by PDZ" 3997:
A concise technical summary and a statement of principal findings and ramifications of the PDZ Domain as a Complex Adaptive System
3748:
Vogel MJ, van Zon P, Brueton L, Gijzen M, van Tuil MC, Cox P, et al. (May 2012). "Mutations in GRIP1 cause Fraser syndrome".
2862:
Morais Cabral JH, Petosa C, Sutcliffe MJ, Raza S, Byron O, Poy F, et al. (August 1996). "Crystal structure of a PDZ domain".
3985: 3976: 3967: 3880:
Ponting CP, Phillips C, Davies KE, Blake DJ (June 1997). "PDZ domains: targeting signalling molecules to sub-membranous sites".
1252: 1110:. Normally the PDZ domain of this enzyme is unbound. In this unbound state the enzyme is active and prevents cell signaling for 4240: 1405: 1198: 1000: 916: 3332:"Regulation of the NMDA receptor complex and trafficking by activity-dependent phosphorylation of the NR2B subunit PDZ ligand" 4148: 1299:
and these combinations allow them to carry out their specific functions. Three of the most well documented PDZ proteins are
1078:. With nNOS located closely to NMDA receptors, it will be activated immediately after calcium ions begin entering the cell. 180: 2609:
Ponting CP, Phillips C (March 1995). "DHR domains in syntrophins, neuronal NO synthases and other intracellular proteins".
4103: 4026: 1074:(nNOS) is brought close to NMDA receptors via interactions with PDZ domains on PSD-95, which concurrently binds nNOS and 1213:
activity. In some examples, phosphorylation of amino acid side chains eliminates the ability of the PDZ domain to form
1382:. Other researchers discovered that domains six and seven of GRIP are responsible for connecting GRIP to a family of 1177:
by PDZ domains and their binding sites indicate a regulative relevance beyond simply receptor protein localization.
4363: 4292: 1165: 1339:
is mediated by the second PDZ domain. The third and final PDZ domain links to cysteine-rich PDZ-binding protein (
965:
PDZ domain structure is partially conserved across the various proteins that contain them. They usually have 5-6
116: 1369:
in a fashion analogous to PSD-95 interactions with NMDA receptors. When researchers noticed apparent structural
4358: 4019: 1383: 1260: 888: 168: 1035: 1379: 974: 843: 3095:
Hopper R, Lancaster B, Garthwaite J (April 2004). "On the regulation of NMDA receptors by nitric oxide".
1255:
have been observed to alter the effectiveness of PDZ domains binding to ligands. These studies show that
4183: 1256: 1210: 1071: 2957: 2916:
Harris BZ, Lim WA (September 2001). "Mechanism and role of PDZ domains in signaling complex assembly".
164: 3701:"PDZ proteins bind, cluster, and synaptically colocalize with Eph receptors and their ephrin ligands" 3657: 3422:"Domain-swapped dimerization of ZO-1 PDZ2 generates specific and regulatory connexin43-binding sites" 3239: 2995: 2871: 1525: 1395: 1374: 1058:
PDZ domains are also utilized to localize elements other than receptor proteins. In the human brain,
1011:
PDZ domains have two main functions: Localizing cellular elements, and regulating cellular pathways.
109: 4000: 1853: 1152:
that the body can interpret. WHRN proteins contains three PDZ domains. The domains located near the
121: 77: 4265: 3599:
Niethammer M, Valtschanoff JG, Kapoor TM, Allison DW, Weinberg RJ, Craig AM, Sheng M (April 1998).
1336: 816: 1709: 4332: 4250: 3948: 3905: 3822: 3773: 3730: 3699:
Torres R, Firestein BL, Dong H, Staudinger J, Olson EN, Huganir RL, et al. (December 1998).
3681: 3630: 3541: 3263: 3183:"The PDZ-domain protein Whirlin facilitates mechanosensory signaling in mammalian proprioceptors" 3163: 3120: 3077: 3019: 2895: 2674: 1370: 999:
amino acids, apart from the GLGF sequence mentioned earlier, the mainchain atoms of which form a
2089: 4327: 3940: 3897: 3857: 3814: 3765: 3722: 3673: 3622: 3576: 3533: 3492: 3451: 3402: 3361: 3312: 3255: 3212: 3155: 3112: 3069: 3011: 2933: 2887: 2844: 2793: 2758: 2709: 2666: 2626: 2588: 2550: 2498: 2438: 2386: 1756: 1674: 1550: 1545: 1130: 985: 808: 187: 155: 2238: 2171: 2151: 4317: 3930: 3889: 3849: 3804: 3757: 3712: 3665: 3612: 3568: 3523: 3482: 3441: 3433: 3392: 3351: 3343: 3302: 3294: 3247: 3202: 3194: 3147: 3104: 3059: 3003: 2925: 2879: 2834: 2824: 2785: 2748: 2740: 2701: 2658: 2618: 2580: 2540: 2532: 2488: 2478: 2428: 2420: 2376: 2366: 2223: 2017: 1992: 1935: 1669: 1664: 1642: 1587: 1206: 1149: 1145: 1092: 1047: 1031:
PDZ domains play a vital role in organizing and maintaining complex scaffolding formations.
977:
differs across PDZ domains. This domain tends to be globular with a diameter of about 35 Ă….
932: 3181:
de Nooij JC, Simon CM, Simon A, Doobar S, Steel KP, Banks RW, et al. (February 2015).
2253: 2218: 2002: 1997: 1982: 1848: 1843: 1741: 1736: 1602: 1505: 1454: 147: 2568: 1900: 1883: 1878: 1801: 1432: 1391: 1387: 1232:
Another post-translational modification that can regulate PDZ domains is the formation of
1202: 1134: 1055:
receptors would diffuse out of the synapse due to the fluid nature of the lipid membrane.
941: 1398:
syndrome that can cause severe deformations, can be caused by a simple mutation in GRIP.
879:
combining the first letters of the first three proteins discovered to share the domain —
3661: 3601:"CRIPT, a novel postsynaptic protein that binds to the third PDZ domain of PSD-95/SAP90" 3243: 2999: 2875: 4255: 4118: 4042: 3989: 3980: 3971: 3446: 3421: 3356: 3331: 3307: 3282: 3207: 3182: 2839: 2812: 2753: 2728: 2545: 2520: 2493: 2466: 2433: 2408: 2381: 2354: 1746: 1296: 1126: 1051: 891:. PDZ domains have previously been referred to as DHR (Dlg homologous region) or GLGF ( 3935: 3918: 3809: 3792: 3717: 3700: 3617: 3600: 3064: 3047: 2789: 2705: 2622: 2584: 4352: 4188: 3167: 3108: 2662: 1366: 1324: 1218: 1214: 1075: 1067: 936: 900: 101: 3909: 3826: 3734: 3634: 3545: 3124: 2678: 53: 4270: 4193: 4178: 4138: 4073: 3952: 3777: 3685: 3347: 3267: 3198: 3081: 3023: 2899: 1714: 1344: 1314: 1304: 1059: 1039: 858: 143: 3761: 3298: 2521:"Ezrin induces long-range interdomain allostery in the scaffolding protein NHERF1" 2467:"PDZ domains and their binding partners: structure, specificity, and modification" 1350: 3471:"Regulation of NR1/NR2C N-methyl-D-aspartate (NMDA) receptors by phosphorylation" 1318:
Basic functioning of PSD-95 in forming a complex between NMDA Receptor and Actin.
65: 4337: 4322: 4245: 4235: 4215: 4210: 4205: 4168: 4123: 4098: 4083: 4078: 4063: 3043: 1328: 1119: 1096: 992: 970: 3528: 3511: 3510:
Mishra P, Socolich M, Wall MA, Graves J, Wang Z, Ranganathan R (October 2007).
2353:
Boxus M, Twizere JC, Legros S, Dewulf JF, Kettmann R, Willems L (August 2008).
1224: 4312: 4307: 4302: 4275: 4260: 4200: 4173: 4163: 4158: 4153: 4143: 4113: 4108: 4093: 4088: 4068: 4058: 2536: 2044: 1288: 1153: 1107: 996: 966: 961:
6 β-strands (blue) and two α-helix (red) are the common motif for PDZ domains.
911: 907: 876: 812: 20: 2829: 4297: 4220: 4133: 4128: 4053: 2929: 1284: 1233: 1137: 1111: 3893: 3861: 3769: 3580: 3537: 3496: 3487: 3470: 3455: 3437: 3406: 3397: 3380: 3365: 3316: 3259: 3216: 3159: 3116: 2937: 2848: 2762: 2554: 2502: 2424: 2390: 2371: 1267:
can enhance the binding of PDZ domains. Researchers found that the protein
1244:. This modification acts primarily as an inhibitor of PDZ domain function. 3944: 3901: 3818: 3726: 3677: 3626: 3073: 3015: 2891: 2797: 2713: 2670: 2630: 2592: 2483: 2442: 1494:
The table below contains all known PDZ proteins in humans (alphabetical):
1390:, which are important signaling proteins. A clinical study concluded that 1070:
activation. In order to ensure a favorable spatial arrangements, neuronal
1014: 957: 910:
of other specific proteins. These short regions bind to the PDZ domain by
105: 2958:"Bristol University | Centre for Synaptic Plasticity | AMPAR interactors" 2692:
Cowburn D (December 1997). "Peptide recognition by PTB and PDZ domains".
2181: 2176: 1560: 1555: 1237: 1173: 1115: 823: 819: 60: 3151: 2243: 2228: 2166: 2161: 2146: 2141: 2069: 2032: 2027: 1659: 1292: 1125:
PDZ domains also have a regulatory role in mechanosensory signaling in
988:. The function of PDZ dimers as compared to monomers is not yet known. 981: 896: 892: 89: 84: 29:(Golgi-associated PDZ and coiled-coil motif-containing protein) protein 3853: 3572: 2744: 3669: 3007: 2883: 2233: 2136: 2131: 2126: 2121: 2054: 2049: 2037: 2012: 1972: 1967: 1960: 1955: 1950: 1945: 1940: 1930: 1925: 1905: 1684: 1679: 1607: 1597: 1592: 1575: 1570: 1565: 1515: 1486: 1481: 1476: 1469: 1401: 1308: 1264: 1141: 1088: 1043: 839: 831: 175: 1106:
is regulated by PDZ domains. This protein is involved in regulating
789: 782: 776: 770: 764: 758: 752: 746: 740: 734: 728: 722: 716: 710: 704: 698: 692: 686: 680: 674: 668: 662: 656: 650: 644: 638: 632: 626: 620: 614: 608: 602: 596: 590: 584: 578: 572: 566: 560: 554: 548: 542: 536: 530: 524: 518: 512: 506: 500: 494: 488: 482: 476: 470: 464: 458: 452: 446: 440: 434: 428: 422: 416: 410: 404: 398: 392: 386: 380: 374: 368: 362: 356: 350: 344: 338: 332: 326: 320: 314: 308: 302: 296: 290: 284: 278: 272: 266: 260: 254: 248: 242: 236: 230: 224: 218: 212: 205: 199: 193: 3917:
Doyle DA, Lee A, Lewis J, Kim E, Sheng M, MacKinnon R (June 1996).
3840:
Jemth P, Gianni S (July 2007). "PDZ domains: folding and binding".
4011: 3251: 2776:
Kennedy MB (September 1995). "Origin of PDZ (DHR, GLGF) domains".
2285: 2280: 2275: 2248: 2213: 2208: 2203: 2198: 2191: 2186: 2156: 2114: 2109: 2104: 2099: 2094: 2084: 2074: 2064: 2059: 2022: 2007: 1987: 1977: 1920: 1858: 1838: 1833: 1828: 1823: 1818: 1813: 1806: 1786: 1781: 1776: 1771: 1766: 1751: 1729: 1724: 1719: 1699: 1694: 1689: 1540: 1535: 1530: 1510: 1464: 1447: 1442: 1340: 1268: 1259:
of certain proteins can affect the binding affinity for different
1241: 1169: 1160:
Regulation of receptor proteins occurs when the PDZ domain on the
1103: 866: 862: 855: 835: 827: 2331: 2290: 2268: 2263: 2258: 2079: 1915: 1895: 1890: 1873: 1868: 1863: 1796: 1791: 1761: 1704: 1652: 1647: 1637: 1632: 1627: 1622: 1617: 1612: 1582: 1520: 1459: 1332: 1300: 884: 880: 851: 847: 137: 48: 26: 4015: 3283:"Therapeutic use of PDZ protein-protein interaction antagonism" 1168:(β2-AR). EBP50 also associates with a complex that connects to 1104:
human protein tyrosine phosphatase non-receptor type 4 (PTPN4)
3994: 3512:"Dynamic scaffolding in a G protein-coupled signaling system" 3469:
Chen BS, Braud S, Badger JD, Isaac JT, Roche KW (June 2006).
2813:"Membrane Binding and Modulation of the PDZ Domain of PICK1" 1354:
Examples of PDZ domain-containing proteins (Figure from Lee
25:
Molecular structure of the PDZ domain included in the human
2320:
There is currently one known virus containing PDZ domains:
2729:"DLG5 in cell polarity maintenance and cancer development" 1050:
activity requires specific receptors to be located in the
2409:"Evidence for PDZ domains in bacteria, yeast, and plants" 4005: 3793:"PDZ domain proteins: scaffolds for signaling complexes" 3379:
Jeleń F, Oleksy A, Smietana K, Otlewski J (2003-01-01).
3330:
Chung HJ, Huang YH, Lau LF, Huganir RL (November 2004).
1291:, whereas there are very few examples of the protein in 2571:(September 1995). "Origin of PDZ (DHR, GLGF) domains". 995:
of the PDZ domain is that it is constituted by several
1148:
of hair cells that transform mechanical movement into
1018:
An example of a protein (GRIP) with seven PDZ domains.
3420:
Chen J, Pan L, Wei Z, Zhao Y, Zhang M (August 2008).
906:
In general PDZ domains bind to a short region of the
3381:"PDZ domains - common players in the cell signaling" 1240:and are susceptible to disulfide bond formation in 186: 174: 154: 136: 131: 115: 95: 83: 71: 59: 47: 39: 34: 980:When studied, PDZ domains are usually isolated as 1365:is a post-synaptic protein that interacts with 2460: 2458: 2456: 2454: 2452: 1295:. PDZ domains are often associated with other 4027: 2644: 2642: 2640: 2604: 2602: 2402: 2400: 1363:Glutamate receptor interacting protein (GRIP) 1343:), which allows PSD-95 to associate with the 1228:Disulfide bridges inhibit PDZ domain function 885:Drosophila disc large tumor suppressor (Dlg1) 8: 2733:International Journal of Biological Sciences 3995:The PDZ Domain as a Complex Adaptive System 4034: 4020: 4012: 2519:Li J, Callaway DJ, Bu Z (September 2009). 128: 3934: 3808: 3716: 3616: 3527: 3486: 3445: 3396: 3355: 3306: 3206: 3063: 2838: 2828: 2752: 2544: 2492: 2482: 2432: 2380: 2370: 3791:Ranganathan R, Ross EM (December 1997). 3281:Wang NX, Lee HJ, Zheng JJ (April 2008). 2811:Erlendsson S, Madsen KL (October 2015). 2727:Liu J, Li J, Ren Y, Liu P (2014-01-01). 2322: 1496: 1423: 1349: 1313: 1271:enhances the binding of the PDZ protein 1223: 1013: 956: 2345: 1164:protein binds to the C-terminus of the 3594: 3592: 3590: 2981: 2979: 2977: 2951: 2949: 2947: 973:. Apart from this conserved fold, the 15: 3037: 3035: 3033: 2911: 2909: 2694:Current Opinion in Structural Biology 881:post synaptic density protein (PSD95) 7: 3097:The European Journal of Neuroscience 3046:, Sheng M, MacKinnon R (June 1996). 2514: 2512: 1331:. A PDZ interaction between PSD-95, 1205:. This modification is primarily an 1062:often acts in the synapse to modify 3475:The Journal of Biological Chemistry 991:A commonly accepted theory for the 946:California Institute of Technology 14: 1185:Regulation of PDZ domain activity 984:, however some PDZ proteins form 889:zonula occludens-1 protein (zo-1) 3986:Eukaryotic Linear Motif resource 3977:Eukaryotic Linear Motif resource 3968:Eukaryotic Linear Motif resource 3109:10.1111/j.1460-9568.2004.03306.x 2471:Cell Communication and Signaling 1193:Post-translational modifications 19: 1157:selectivity of its PDZ domain. 1001:nest (protein structural motif) 917:nest (protein structural motif) 3348:10.1523/JNEUROSCI.0546-04.2004 3199:10.1523/JNEUROSCI.3699-14.2015 2778:Trends in Biochemical Sciences 2611:Trends in Biochemical Sciences 2573:Trends in Biochemical Sciences 1199:post-traslational modification 1: 3936:10.1016/S0092-8674(00)81307-0 3810:10.1016/S0960-9822(06)00401-5 3762:10.1136/jmedgenet-2011-100590 3718:10.1016/S0896-6273(00)80663-7 3618:10.1016/s0896-6273(00)81009-0 3299:10.1358/dnp.2008.21.3.1203409 3065:10.1016/S0092-8674(00)81307-0 2790:10.1016/s0968-0004(00)89074-x 2706:10.1016/S0959-440X(97)80155-8 2623:10.1016/S0968-0004(00)88973-2 2585:10.1016/S0968-0004(00)89074-X 2465:Lee HJ, Zheng JJ (May 2010). 1102:The signaling pathway of the 1095:, and the sorting pathway of 132:Available protein structures: 4001:NCBI conserved domains entry 3287:Drug News & Perspectives 2663:10.1016/0896-6273(92)90245-9 2525:Journal of Molecular Biology 2407:Ponting CP (February 1997). 2355:"The HTLV-1 Tax interactome" 1253:Protein-protein interactions 3750:Journal of Medical Genetics 3336:The Journal of Neuroscience 3187:The Journal of Neuroscience 1236:. Many PDZ domains contain 969:and one short and one long 4380: 3529:10.1016/j.cell.2007.07.037 3042:Doyle DA, Lee A, Lewis J, 1499: 1166:beta-2 adrenergic receptor 919:in the PDZ domain, i.e. a 4049: 2537:10.1016/j.jmb.2009.07.005 2330: 2325: 1426: 1384:receptor tyrosine kinases 1118:as the cells are able to 127: 18: 3385:Acta Biochimica Polonica 2956:Bristol, University of. 2830:10.3390/membranes5040597 1093:mechanosensory signaling 2930:10.1242/jcs.114.18.3219 2918:Journal of Cell Science 1500:PDZ Proteins in Humans 1329:Shaker-type K+ channels 1248:Allosteric Interactions 1201:seen on PDZ domains is 3894:10.1002/bies.950190606 3488:10.1074/jbc.M513029200 3438:10.1038/emboj.2008.138 3398:10.18388/abp.2003_3628 2425:10.1002/pro.5560060225 2372:10.1186/1742-4690-5-76 1406:metabotropic glutamate 1359: 1319: 1229: 1066:levels in response to 1019: 962: 844:cell surface receptors 4006:https://www.pdznet.eu 2484:10.1186/1478-811X-8-8 1427:Studied PDZ Proteins 1353: 1317: 1227: 1146:post-synaptic neurons 1072:nitric oxide synthase 1017: 960: 1242:oxidizing conditions 927:Origins of discovery 3662:1997Natur.386..279D 3244:1999Natur.401..286C 3000:1997Natur.386..284B 2876:1996Natur.382..649C 1396:autosomal recessive 1099:receptor proteins. 975:secondary structure 861:via mediators like 3152:10.1111/febs.13024 2924:(Pt 18): 3219–31. 1416:Human PDZ proteins 1360: 1320: 1257:allosteric effects 1230: 1209:of PDZ domain and 1116:oncogenic activity 1046:, making sense of 1020: 963: 4364:Membrane proteins 4346: 4345: 3854:10.1021/bi7008618 3573:10.1021/bi700954e 2962:www.bristol.ac.uk 2745:10.7150/ijbs.8888 2337: 2336: 2318: 2317: 1492: 1491: 1234:disulfide bridges 1150:action potentials 1144:localizes in the 921:PDZ-binding motif 809:structural domain 801: 800: 797: 796: 181:structure summary 4371: 4036: 4029: 4022: 4013: 3956: 3938: 3913: 3866: 3865: 3837: 3831: 3830: 3812: 3788: 3782: 3781: 3745: 3739: 3738: 3720: 3696: 3690: 3689: 3670:10.1038/386279a0 3656:(6622): 279–84. 3645: 3639: 3638: 3620: 3596: 3585: 3584: 3567:(47): 13629–37. 3556: 3550: 3549: 3531: 3507: 3501: 3500: 3490: 3481:(24): 16583–90. 3466: 3460: 3459: 3449: 3426:The EMBO Journal 3417: 3411: 3410: 3400: 3376: 3370: 3369: 3359: 3342:(45): 10248–59. 3327: 3321: 3320: 3310: 3278: 3272: 3271: 3238:(6750): 286–90. 3227: 3221: 3220: 3210: 3178: 3172: 3171: 3140:The FEBS Journal 3135: 3129: 3128: 3092: 3086: 3085: 3067: 3039: 3028: 3027: 3008:10.1038/386284a0 2983: 2972: 2971: 2969: 2968: 2953: 2942: 2941: 2913: 2904: 2903: 2884:10.1038/382649a0 2870:(6592): 649–52. 2859: 2853: 2852: 2842: 2832: 2808: 2802: 2801: 2773: 2767: 2766: 2756: 2724: 2718: 2717: 2689: 2683: 2682: 2646: 2635: 2634: 2606: 2597: 2596: 2565: 2559: 2558: 2548: 2516: 2507: 2506: 2496: 2486: 2462: 2447: 2446: 2436: 2404: 2395: 2394: 2384: 2374: 2350: 2323: 1497: 1424: 1388:ephrin receptors 1375:yeast two-hybrid 1323:with PSD-95 are 1197:The most common 1048:neurotransmitter 1038:proteins to the 792: 785: 779: 773: 767: 761: 755: 749: 743: 737: 731: 725: 719: 713: 707: 701: 695: 689: 683: 677: 671: 665: 659: 653: 647: 641: 635: 629: 623: 617: 611: 605: 599: 593: 587: 581: 575: 569: 563: 557: 551: 545: 539: 533: 527: 521: 515: 509: 503: 497: 491: 485: 479: 473: 467: 461: 455: 449: 443: 437: 431: 425: 419: 413: 407: 401: 395: 389: 383: 377: 371: 365: 359: 353: 347: 341: 335: 329: 323: 317: 311: 305: 299: 293: 287: 281: 275: 269: 263: 257: 251: 245: 239: 233: 227: 221: 215: 208: 202: 196: 129: 23: 16: 4379: 4378: 4374: 4373: 4372: 4370: 4369: 4368: 4359:Protein domains 4349: 4348: 4347: 4342: 4045: 4043:Protein domains 4040: 3990:LIG_PDZ_Class_3 3981:LIG_PDZ_Class_2 3972:LIG_PDZ_Class_1 3964: 3959: 3916: 3879: 3875: 3873:Further reading 3870: 3869: 3839: 3838: 3834: 3797:Current Biology 3790: 3789: 3785: 3747: 3746: 3742: 3698: 3697: 3693: 3647: 3646: 3642: 3598: 3597: 3588: 3558: 3557: 3553: 3509: 3508: 3504: 3468: 3467: 3463: 3432:(15): 2113–23. 3419: 3418: 3414: 3391:(4): 985–1017. 3378: 3377: 3373: 3329: 3328: 3324: 3280: 3279: 3275: 3229: 3228: 3224: 3180: 3179: 3175: 3146:(21): 4852–65. 3137: 3136: 3132: 3094: 3093: 3089: 3041: 3040: 3031: 2994:(6622): 284–8. 2985: 2984: 2975: 2966: 2964: 2955: 2954: 2945: 2915: 2914: 2907: 2861: 2860: 2856: 2810: 2809: 2805: 2775: 2774: 2770: 2726: 2725: 2721: 2691: 2690: 2686: 2648: 2647: 2638: 2608: 2607: 2600: 2567: 2566: 2562: 2518: 2517: 2510: 2464: 2463: 2450: 2413:Protein Science 2406: 2405: 2398: 2352: 2351: 2347: 2342: 1418: 1392:Fraser syndrome 1297:protein domains 1281: 1250: 1203:phosphorylation 1195: 1187: 1084: 1029: 1009: 955: 942:Mary B. Kennedy 929: 788: 781: 775: 769: 763: 757: 751: 745: 739: 733: 727: 721: 715: 709: 703: 697: 691: 685: 679: 673: 667: 661: 655: 649: 643: 637: 631: 625: 619: 613: 607: 601: 595: 589: 583: 577: 571: 565: 559: 553: 547: 541: 535: 529: 523: 517: 511: 505: 499: 493: 487: 481: 475: 469: 463: 457: 451: 445: 439: 433: 427: 421: 415: 409: 403: 397: 391: 385: 379: 373: 367: 361: 355: 349: 343: 337: 331: 325: 319: 313: 307: 301: 295: 289: 283: 277: 271: 265: 259: 253: 247: 241: 235: 229: 223: 217: 211: 204: 198: 192: 30: 12: 11: 5: 4377: 4375: 4367: 4366: 4361: 4351: 4350: 4344: 4343: 4341: 4340: 4335: 4330: 4325: 4320: 4315: 4310: 4305: 4300: 4295: 4290: 4285: 4284: 4283: 4273: 4268: 4263: 4258: 4253: 4248: 4243: 4238: 4233: 4228: 4223: 4218: 4213: 4208: 4203: 4198: 4197: 4196: 4191: 4186: 4181: 4171: 4166: 4161: 4156: 4151: 4146: 4141: 4136: 4131: 4126: 4121: 4116: 4111: 4106: 4101: 4096: 4091: 4086: 4081: 4076: 4071: 4066: 4061: 4056: 4050: 4047: 4046: 4041: 4039: 4038: 4031: 4024: 4016: 4010: 4009: 4003: 3998: 3992: 3983: 3974: 3963: 3962:External links 3960: 3958: 3957: 3929:(7): 1067–76. 3914: 3876: 3874: 3871: 3868: 3867: 3848:(30): 8701–8. 3832: 3803:(12): R770-3. 3783: 3740: 3711:(6): 1453–63. 3691: 3640: 3611:(4): 693–707. 3586: 3551: 3502: 3461: 3412: 3371: 3322: 3273: 3222: 3193:(7): 3073–84. 3173: 3130: 3103:(7): 1675–82. 3087: 3058:(7): 1067–76. 3029: 2973: 2943: 2905: 2854: 2823:(4): 597–615. 2803: 2768: 2719: 2684: 2636: 2598: 2560: 2508: 2448: 2396: 2344: 2343: 2341: 2338: 2335: 2334: 2328: 2327: 2316: 2315: 2313: 2311: 2309: 2307: 2305: 2303: 2301: 2299: 2297: 2295: 2293: 2288: 2283: 2278: 2272: 2271: 2266: 2261: 2256: 2251: 2246: 2241: 2236: 2231: 2226: 2221: 2216: 2211: 2206: 2201: 2195: 2194: 2189: 2184: 2179: 2174: 2169: 2164: 2159: 2154: 2149: 2144: 2139: 2134: 2129: 2124: 2118: 2117: 2112: 2107: 2102: 2097: 2092: 2087: 2082: 2077: 2072: 2067: 2062: 2057: 2052: 2047: 2041: 2040: 2035: 2030: 2025: 2020: 2015: 2010: 2005: 2000: 1995: 1990: 1985: 1980: 1975: 1970: 1964: 1963: 1958: 1953: 1948: 1943: 1938: 1933: 1928: 1923: 1918: 1913: 1908: 1903: 1898: 1893: 1887: 1886: 1881: 1876: 1871: 1866: 1861: 1856: 1851: 1846: 1841: 1836: 1831: 1826: 1821: 1816: 1810: 1809: 1804: 1799: 1794: 1789: 1784: 1779: 1774: 1769: 1764: 1759: 1754: 1749: 1744: 1739: 1733: 1732: 1727: 1722: 1717: 1712: 1707: 1702: 1697: 1692: 1687: 1682: 1677: 1672: 1667: 1662: 1656: 1655: 1650: 1645: 1640: 1635: 1630: 1625: 1620: 1615: 1610: 1605: 1600: 1595: 1590: 1585: 1579: 1578: 1573: 1568: 1563: 1558: 1553: 1548: 1543: 1538: 1533: 1528: 1523: 1518: 1513: 1508: 1502: 1501: 1490: 1489: 1484: 1479: 1473: 1472: 1467: 1462: 1457: 1451: 1450: 1445: 1440: 1435: 1429: 1428: 1417: 1414: 1380:memory storage 1367:AMPA receptors 1325:NMDA receptors 1280: 1277: 1249: 1246: 1215:hydrogen bonds 1194: 1191: 1186: 1183: 1142:Whirlin (WHRN) 1140:. The protein 1127:proprioceptors 1083: 1080: 1076:NMDA receptors 1052:lipid membrane 1028: 1025: 1008: 1005: 993:binding pocket 954: 951: 937:cell junctions 928: 925: 799: 798: 795: 794: 190: 184: 183: 178: 172: 171: 158: 152: 151: 141: 134: 133: 125: 124: 119: 113: 112: 99: 93: 92: 87: 81: 80: 75: 69: 68: 63: 57: 56: 51: 45: 44: 41: 37: 36: 32: 31: 24: 13: 10: 9: 6: 4: 3: 2: 4376: 4365: 4362: 4360: 4357: 4356: 4354: 4339: 4336: 4334: 4331: 4329: 4326: 4324: 4321: 4319: 4316: 4314: 4311: 4309: 4306: 4304: 4301: 4299: 4296: 4294: 4291: 4289: 4286: 4282: 4279: 4278: 4277: 4274: 4272: 4269: 4267: 4264: 4262: 4259: 4257: 4254: 4252: 4249: 4247: 4244: 4242: 4239: 4237: 4234: 4232: 4229: 4227: 4224: 4222: 4219: 4217: 4214: 4212: 4209: 4207: 4204: 4202: 4199: 4195: 4192: 4190: 4187: 4185: 4182: 4180: 4177: 4176: 4175: 4172: 4170: 4167: 4165: 4162: 4160: 4157: 4155: 4152: 4150: 4147: 4145: 4142: 4140: 4137: 4135: 4132: 4130: 4127: 4125: 4122: 4120: 4117: 4115: 4112: 4110: 4107: 4105: 4102: 4100: 4097: 4095: 4092: 4090: 4087: 4085: 4082: 4080: 4077: 4075: 4072: 4070: 4067: 4065: 4062: 4060: 4057: 4055: 4052: 4051: 4048: 4044: 4037: 4032: 4030: 4025: 4023: 4018: 4017: 4014: 4007: 4004: 4002: 3999: 3996: 3993: 3991: 3987: 3984: 3982: 3978: 3975: 3973: 3969: 3966: 3965: 3961: 3954: 3950: 3946: 3942: 3937: 3932: 3928: 3924: 3920: 3915: 3911: 3907: 3903: 3899: 3895: 3891: 3888:(6): 469–79. 3887: 3883: 3878: 3877: 3872: 3863: 3859: 3855: 3851: 3847: 3843: 3836: 3833: 3828: 3824: 3820: 3816: 3811: 3806: 3802: 3798: 3794: 3787: 3784: 3779: 3775: 3771: 3767: 3763: 3759: 3755: 3751: 3744: 3741: 3736: 3732: 3728: 3724: 3719: 3714: 3710: 3706: 3702: 3695: 3692: 3687: 3683: 3679: 3675: 3671: 3667: 3663: 3659: 3655: 3651: 3644: 3641: 3636: 3632: 3628: 3624: 3619: 3614: 3610: 3606: 3602: 3595: 3593: 3591: 3587: 3582: 3578: 3574: 3570: 3566: 3562: 3555: 3552: 3547: 3543: 3539: 3535: 3530: 3525: 3521: 3517: 3513: 3506: 3503: 3498: 3494: 3489: 3484: 3480: 3476: 3472: 3465: 3462: 3457: 3453: 3448: 3443: 3439: 3435: 3431: 3427: 3423: 3416: 3413: 3408: 3404: 3399: 3394: 3390: 3386: 3382: 3375: 3372: 3367: 3363: 3358: 3353: 3349: 3345: 3341: 3337: 3333: 3326: 3323: 3318: 3314: 3309: 3304: 3300: 3296: 3293:(3): 137–41. 3292: 3288: 3284: 3277: 3274: 3269: 3265: 3261: 3257: 3253: 3252:10.1038/45816 3249: 3245: 3241: 3237: 3233: 3226: 3223: 3218: 3214: 3209: 3204: 3200: 3196: 3192: 3188: 3184: 3177: 3174: 3169: 3165: 3161: 3157: 3153: 3149: 3145: 3141: 3134: 3131: 3126: 3122: 3118: 3114: 3110: 3106: 3102: 3098: 3091: 3088: 3083: 3079: 3075: 3071: 3066: 3061: 3057: 3053: 3049: 3045: 3038: 3036: 3034: 3030: 3025: 3021: 3017: 3013: 3009: 3005: 3001: 2997: 2993: 2989: 2982: 2980: 2978: 2974: 2963: 2959: 2952: 2950: 2948: 2944: 2939: 2935: 2931: 2927: 2923: 2919: 2912: 2910: 2906: 2901: 2897: 2893: 2889: 2885: 2881: 2877: 2873: 2869: 2865: 2858: 2855: 2850: 2846: 2841: 2836: 2831: 2826: 2822: 2818: 2814: 2807: 2804: 2799: 2795: 2791: 2787: 2783: 2779: 2772: 2769: 2764: 2760: 2755: 2750: 2746: 2742: 2738: 2734: 2730: 2723: 2720: 2715: 2711: 2707: 2703: 2699: 2695: 2688: 2685: 2680: 2676: 2672: 2668: 2664: 2660: 2657:(5): 929–42. 2656: 2652: 2645: 2643: 2641: 2637: 2632: 2628: 2624: 2620: 2616: 2612: 2605: 2603: 2599: 2594: 2590: 2586: 2582: 2578: 2574: 2570: 2564: 2561: 2556: 2552: 2547: 2542: 2538: 2534: 2531:(1): 166–80. 2530: 2526: 2522: 2515: 2513: 2509: 2504: 2500: 2495: 2490: 2485: 2480: 2476: 2472: 2468: 2461: 2459: 2457: 2455: 2453: 2449: 2444: 2440: 2435: 2430: 2426: 2422: 2418: 2414: 2410: 2403: 2401: 2397: 2392: 2388: 2383: 2378: 2373: 2368: 2364: 2360: 2359:Retrovirology 2356: 2349: 2346: 2339: 2333: 2329: 2324: 2321: 2314: 2312: 2310: 2308: 2306: 2304: 2302: 2300: 2298: 2296: 2294: 2292: 2289: 2287: 2284: 2282: 2279: 2277: 2274: 2273: 2270: 2267: 2265: 2262: 2260: 2257: 2255: 2252: 2250: 2247: 2245: 2242: 2240: 2237: 2235: 2232: 2230: 2227: 2225: 2222: 2220: 2217: 2215: 2212: 2210: 2207: 2205: 2202: 2200: 2197: 2196: 2193: 2190: 2188: 2185: 2183: 2180: 2178: 2175: 2173: 2170: 2168: 2165: 2163: 2160: 2158: 2155: 2153: 2150: 2148: 2145: 2143: 2140: 2138: 2135: 2133: 2130: 2128: 2125: 2123: 2120: 2119: 2116: 2113: 2111: 2108: 2106: 2103: 2101: 2098: 2096: 2093: 2091: 2088: 2086: 2083: 2081: 2078: 2076: 2073: 2071: 2068: 2066: 2063: 2061: 2058: 2056: 2053: 2051: 2048: 2046: 2043: 2042: 2039: 2036: 2034: 2031: 2029: 2026: 2024: 2021: 2019: 2016: 2014: 2011: 2009: 2006: 2004: 2001: 1999: 1996: 1994: 1991: 1989: 1986: 1984: 1981: 1979: 1976: 1974: 1971: 1969: 1966: 1965: 1962: 1959: 1957: 1954: 1952: 1949: 1947: 1944: 1942: 1939: 1937: 1934: 1932: 1929: 1927: 1924: 1922: 1919: 1917: 1914: 1912: 1909: 1907: 1904: 1902: 1899: 1897: 1894: 1892: 1889: 1888: 1885: 1882: 1880: 1877: 1875: 1872: 1870: 1867: 1865: 1862: 1860: 1857: 1855: 1852: 1850: 1847: 1845: 1842: 1840: 1837: 1835: 1832: 1830: 1827: 1825: 1822: 1820: 1817: 1815: 1812: 1811: 1808: 1805: 1803: 1800: 1798: 1795: 1793: 1790: 1788: 1785: 1783: 1780: 1778: 1775: 1773: 1770: 1768: 1765: 1763: 1760: 1758: 1755: 1753: 1750: 1748: 1745: 1743: 1740: 1738: 1735: 1734: 1731: 1728: 1726: 1723: 1721: 1718: 1716: 1713: 1711: 1708: 1706: 1703: 1701: 1698: 1696: 1693: 1691: 1688: 1686: 1683: 1681: 1678: 1676: 1673: 1671: 1668: 1666: 1663: 1661: 1658: 1657: 1654: 1651: 1649: 1646: 1644: 1641: 1639: 1636: 1634: 1631: 1629: 1626: 1624: 1621: 1619: 1616: 1614: 1611: 1609: 1606: 1604: 1601: 1599: 1596: 1594: 1591: 1589: 1586: 1584: 1581: 1580: 1577: 1574: 1572: 1569: 1567: 1564: 1562: 1559: 1557: 1554: 1552: 1549: 1547: 1544: 1542: 1539: 1537: 1534: 1532: 1529: 1527: 1524: 1522: 1519: 1517: 1514: 1512: 1509: 1507: 1504: 1503: 1498: 1495: 1488: 1485: 1483: 1480: 1478: 1475: 1474: 1471: 1468: 1466: 1463: 1461: 1458: 1456: 1453: 1452: 1449: 1446: 1444: 1441: 1439: 1436: 1434: 1431: 1430: 1425: 1422: 1415: 1413: 1411: 1407: 1403: 1399: 1397: 1393: 1389: 1385: 1381: 1376: 1372: 1368: 1364: 1357: 1352: 1348: 1346: 1342: 1338: 1334: 1330: 1326: 1316: 1312: 1310: 1306: 1302: 1298: 1294: 1290: 1286: 1278: 1276: 1274: 1270: 1266: 1262: 1258: 1254: 1247: 1245: 1243: 1239: 1235: 1226: 1222: 1220: 1216: 1212: 1208: 1204: 1200: 1192: 1190: 1184: 1182: 1178: 1175: 1171: 1167: 1163: 1158: 1155: 1151: 1147: 1143: 1139: 1136: 1132: 1128: 1123: 1121: 1117: 1113: 1109: 1105: 1100: 1098: 1094: 1090: 1081: 1079: 1077: 1073: 1069: 1068:NMDA receptor 1065: 1061: 1056: 1053: 1049: 1045: 1041: 1037: 1032: 1026: 1024: 1016: 1012: 1006: 1004: 1002: 998: 994: 989: 987: 983: 978: 976: 972: 968: 959: 952: 950: 947: 943: 938: 934: 926: 924: 922: 918: 913: 909: 904: 902: 901:phenylalanine 898: 894: 890: 886: 882: 878: 874: 870: 868: 864: 860: 857: 853: 849: 845: 841: 837: 833: 829: 825: 821: 818: 815:found in the 814: 810: 806: 791: 787: 784: 778: 772: 766: 760: 754: 748: 742: 736: 730: 724: 718: 712: 706: 700: 694: 688: 682: 676: 670: 664: 658: 652: 646: 640: 634: 628: 622: 616: 610: 604: 598: 592: 586: 580: 574: 568: 562: 556: 550: 544: 538: 532: 526: 520: 514: 508: 502: 496: 490: 484: 478: 472: 466: 460: 454: 448: 442: 436: 430: 424: 418: 414:A: 728-812 412: 406: 400: 394: 388: 382: 376: 370: 364: 358: 352: 346: 340: 334: 328: 322: 316: 310: 304: 298: 292: 286: 280: 274: 268: 262: 256: 250: 244: 238: 232: 226: 220: 214: 207: 201: 195: 191: 189: 185: 182: 179: 177: 173: 170: 166: 162: 159: 157: 153: 149: 145: 142: 139: 135: 130: 126: 123: 120: 118: 114: 111: 107: 103: 100: 98: 94: 91: 88: 86: 82: 79: 76: 74: 70: 67: 64: 62: 58: 55: 52: 50: 46: 42: 38: 33: 28: 22: 17: 4287: 3988:motif class 3979:motif class 3970:motif class 3926: 3922: 3885: 3881: 3845: 3842:Biochemistry 3841: 3835: 3800: 3796: 3786: 3756:(5): 303–6. 3753: 3749: 3743: 3708: 3704: 3694: 3653: 3649: 3643: 3608: 3604: 3564: 3561:Biochemistry 3560: 3554: 3522:(1): 80–92. 3519: 3515: 3505: 3478: 3474: 3464: 3429: 3425: 3415: 3388: 3384: 3374: 3339: 3335: 3325: 3290: 3286: 3276: 3235: 3231: 3225: 3190: 3186: 3176: 3143: 3139: 3133: 3100: 3096: 3090: 3055: 3051: 2991: 2987: 2965:. Retrieved 2961: 2921: 2917: 2867: 2863: 2857: 2820: 2816: 2806: 2781: 2777: 2771: 2739:(5): 543–9. 2736: 2732: 2722: 2700:(6): 835–8. 2697: 2693: 2687: 2654: 2650: 2617:(3): 102–3. 2614: 2610: 2576: 2572: 2563: 2528: 2524: 2474: 2470: 2419:(2): 464–8. 2416: 2412: 2362: 2358: 2348: 2319: 1493: 1419: 1400: 1361: 1355: 1345:cytoskeleton 1321: 1282: 1279:PDZ proteins 1251: 1231: 1219:charge ratio 1196: 1188: 1179: 1159: 1124: 1101: 1085: 1060:nitric oxide 1057: 1040:cytoskeleton 1033: 1030: 1027:Localization 1021: 1010: 990: 979: 964: 930: 920: 905: 872: 871: 859:cytoskeleton 807:is a common 804: 802: 780:A:198-270 774:A:198-270 762:B:198-270 756:A:160-250 744:A:490-568 738:A:256-333 726:A:114-191 720:B:114-191 708:A:114-191 702:A:18-92 690:A:752-838 672:A:4-81 666:A:5-82 654:A:672-751 648:A:248-329 636:A:471-557 630:A:471-557 618:A:656-740 612:A:656-740 600:A:17-96 594:A:17-96 582:A:668-753 576:A:619-702 564:A:988-1067 558:A:10-94 546:A:1240-1316 540:A:249-336 528:A:211-289 522:A:279-357 510:A:1323-1407 504:A:1323-1407 498:A:1323-1407 492:A:251-336 486:A:254-339 474:A:1100-1189 468:A:1368-1450 462:A:1368-1450 456:A:1368-1450 450:A:1357-1439 444:A:1357-1439 438:A:1357-1439 432:A:504-589 420:A:993-1073 402:A:47-125 396:A:226-310 384:A:160-244 378:A:224-308 366:A:65-149 360:A:65-149 348:A:313-391 342:A:313-391 330:A:313-391 324:A:313-391 312:A:81-161 306:A:81-161 294:A:81-161 288:A:517-602 276:A:1147-1226 270:A:778-859 258:A:663-754 252:A:14-91 240:A:639-680 234:A:426-492 222:A:151-232 216:A:151-232 210: 203:A:388-442 197:B:248-262 4338:zinc finger 1120:proliferate 1097:endocytosed 997:hydrophobic 903:) domains. 813:amino-acids 684::533-616 426:A:974-1056 282:A:920-1007 35:Identifiers 4353:Categories 2967:2015-12-03 2784:(9): 350. 2579:(9): 350. 2569:Kennedy MB 2340:References 1337:syntrophin 1289:eubacteria 1285:eukaryotes 1261:substrates 1154:N-terminus 1138:hair cells 1131:vestibular 1108:cell death 1091:activity, 1082:Regulation 912:beta sheet 908:C-terminus 877:initialism 805:PDZ domain 786:A:747-820 768:A:198-270 750:D:157-247 732:A:419-501 714:B:114-191 696:B:300-373 660:A:672-751 642:A:456-542 624:A:656-740 606:A:656-740 588:A:816-887 570:A:605-688 552:A:412-495 516:A:140-219 408:A:871-947 390:A:193-277 354:A:386-464 336:A:313-391 264:A:663-754 228:A:151-232 209:A:151-232 144:structures 4226:EcoEI_R_C 3882:BioEssays 3168:205135373 2817:Membranes 1238:cysteines 1207:inhibitor 1112:apoptosis 1007:Functions 967:β-strands 953:Structure 899:-glycine- 854:) to the 846:(such as 817:signaling 811:of 80-90 793:A:747-820 534:A:17-103 372:A:65-149 318::466-544 300:A:81-161 90:PDOC50106 66:IPR001478 3910:12469779 3862:17620015 3827:13636955 3770:22510445 3735:15441813 3635:16068361 3581:17979300 3546:14008319 3538:17923089 3497:16606616 3456:18636092 3407:14739991 3366:15537897 3317:18560611 3260:10499588 3217:25698744 3160:25158884 3125:23939649 3117:15078541 2938:11591811 2849:26501328 2763:24910533 2679:28528759 2555:19591839 2503:20509869 2391:18702816 2326:Viruses 2182:SLC9A3R2 2177:SLC9A3R1 1757:KIAA1849 1675:FRMPD2L1 1561:ARHGEF12 1556:ARHGEF11 1551:ARHGAP23 1546:ARHGAP21 1371:homology 1174:lysosome 1135:auditory 1036:receptor 982:monomers 933:synaptic 824:bacteria 820:proteins 480:A:22-94 246:A:14-91 161:RCSB PDB 61:InterPro 4256:Kringle 4149:CGI-121 4119:BTB/POZ 3953:9739481 3945:8674113 3902:9204764 3819:9382826 3778:7211700 3727:9883737 3686:4361791 3678:9069286 3658:Bibcode 3627:9581762 3447:2516886 3357:6730169 3308:4055467 3268:4386883 3240:Bibcode 3208:4331628 3082:9739481 3074:8674113 3024:4346579 3016:9069287 2996:Bibcode 2900:4344406 2892:8757139 2872:Bibcode 2840:4704001 2798:7482701 2754:4046881 2714:9434904 2671:1419001 2631:7535955 2593:7482701 2546:2756645 2494:2891790 2443:9041651 2434:2143646 2382:2533353 2244:TAX1BP3 2239:SYNPO2L 2229:SYNJ2BP 2172:SIPA1L3 2167:SIPA1L2 2162:SIPA1L1 2152:SHROOM4 2147:SHROOM3 2142:SHROOM2 2070:RAPGEF2 2033:PPP1R9B 2028:PPP1R9A 1660:ERBB2IP 1386:called 1293:archaea 1265:enzymes 971:α-helix 944:of the 897:leucine 893:glycine 840:animals 836:viruses 678:A:3-81 122:cd00136 85:PROSITE 54:PF00595 3951:  3943:  3908:  3900:  3860:  3825:  3817:  3776:  3768:  3733:  3725:  3705:Neuron 3684:  3676:  3650:Nature 3633:  3625:  3605:Neuron 3579:  3544:  3536:  3495:  3454:  3444:  3405:  3364:  3354:  3315:  3305:  3266:  3258:  3232:Nature 3215:  3205:  3166:  3158:  3123:  3115:  3080:  3072:  3022:  3014:  2988:Nature 2936:  2898:  2890:  2864:Nature 2847:  2837:  2796:  2761:  2751:  2712:  2677:  2669:  2651:Neuron 2629:  2591:  2553:  2543:  2501:  2491:  2441:  2431:  2389:  2379:  2365:: 76. 2234:SYNPO2 2224:STXBP4 2137:SHANK3 2132:SHANK2 2127:SHANK1 2122:SDCBP2 2055:PTPN13 2050:PSCDBP 2018:PDZRN4 2013:PDZRN3 1993:PDZD5A 1973:PDZD11 1968:PDLIM7 1961:PDLIM5 1956:PDLIM4 1951:PDLIM3 1946:PDLIM2 1941:PDLIM1 1936:PARD6G 1931:PARD6B 1926:PARD6A 1911:NHERF1 1906:MYO18A 1685:FRMPD4 1680:FRMPD3 1670:FRMPD2 1665:FRMPD1 1643:DVL1L1 1608:DFNB31 1598:CNKSR3 1593:CNKSR2 1588:CLP-36 1576:CARD14 1571:CARD11 1566:CARD10 1516:AHNAK2 1487:PTP-BL 1482:CARD14 1477:CARD11 1470:CARD10 1460:PSD-95 1410:mGluR5 1307:, and 1301:PSD-95 1273:NHERF1 1211:ligand 1089:enzyme 1044:neuron 986:dimers 887:, and 875:is an 832:plants 176:PDBsum 150:  140:  110:SUPFAM 40:Symbol 4271:NACHT 4194:Pyrin 4174:Death 4139:Cache 4074:ADF-H 3949:S2CID 3906:S2CID 3823:S2CID 3774:S2CID 3731:S2CID 3682:S2CID 3631:S2CID 3542:S2CID 3264:S2CID 3164:S2CID 3121:S2CID 3078:S2CID 3044:Kim E 3020:S2CID 2896:S2CID 2675:S2CID 2477:: 8. 2286:USH1C 2281:TRPC5 2276:TRPC4 2254:TIAM2 2249:TIAM1 2219:SPAL2 2214:SNX27 2209:SNTG2 2204:SNTG1 2199:SNTB2 2192:SNTB1 2187:SNTA1 2157:SIPA1 2115:SDCBP 2110:SCRIB 2105:SCN5A 2100:RIMS2 2095:RIMS1 2085:RHPN1 2075:RGS12 2065:PTPN4 2060:PTPN3 2038:PREX1 2023:PICK1 2008:PDZK1 2003:PDZD8 1998:PDZD7 1988:PDZD4 1983:PDZD3 1978:PDZD2 1921:PARD3 1859:MLLT4 1849:MAST4 1844:MAST3 1839:MAST2 1834:MAST1 1829:MAGIX 1824:MAGI3 1819:MAGI2 1814:MAGI1 1807:LRRC7 1787:LIN7C 1782:LIN7B 1777:LIN7A 1772:LIMK2 1767:LIMK1 1752:INADL 1742:HTRA4 1737:HTRA3 1730:HTRA2 1725:HTRA1 1720:GRIP2 1715:GRIP1 1710:GRASP 1700:GIPC3 1695:GIPC2 1690:GIPC1 1603:CRTAM 1541:APBA3 1536:APBA2 1531:APBA1 1511:AHNAK 1506:AAG12 1465:SAP97 1455:Htra3 1448:Htra2 1443:Htra1 1433:Erbin 1402:HOMER 1394:, an 1356:et al 1341:CRIPT 1309:HOMER 1269:ezrin 1170:actin 1162:EBP50 867:ezrin 863:NHERF 856:actin 828:yeast 106:SCOPe 97:SCOP2 73:SMART 4323:WD40 4318:TRIO 4251:HEAT 4246:FYVE 4241:FGGY 4236:ENTH 4216:DHR2 4211:DHR1 4206:DHHC 4189:CARD 4169:CVHN 4124:BZIP 4099:BESS 4084:ARID 4079:ANTH 4064:ACDC 3941:PMID 3923:Cell 3898:PMID 3858:PMID 3815:PMID 3766:PMID 3723:PMID 3674:PMID 3623:PMID 3577:PMID 3534:PMID 3516:Cell 3493:PMID 3452:PMID 3403:PMID 3362:PMID 3313:PMID 3256:PMID 3213:PMID 3156:PMID 3113:PMID 3070:PMID 3052:Cell 3012:PMID 2934:PMID 2888:PMID 2845:PMID 2794:PMID 2759:PMID 2710:PMID 2667:PMID 2627:PMID 2589:PMID 2551:PMID 2499:PMID 2439:PMID 2387:PMID 2332:Tax1 2291:WHRN 2269:TJP3 2264:TJP2 2259:TJP1 2080:RGS3 1916:NOS1 1901:MPP7 1896:MPP6 1891:MPP5 1884:MPP4 1879:MPP3 1874:MPP2 1869:MPP1 1864:MPDZ 1854:MCSP 1802:LNX2 1797:LNX1 1792:LMO7 1762:LDB3 1747:IL16 1705:GOPC 1653:DVL3 1648:DVL2 1638:DVL1 1633:DLG5 1628:DLG4 1623:DLG3 1618:DLG2 1613:DLG1 1583:CASK 1521:AIP1 1438:GRIP 1335:and 1333:nNOS 1305:GRIP 1287:and 1133:and 1129:and 1064:cGMP 865:and 852:FZD7 850:and 848:Cftr 838:and 803:The 790:1y7n 783:1u39 777:1r6j 771:1nte 765:1obx 759:1oby 753:1rzx 747:1nf3 741:1kwa 735:1va8 729:1wh1 723:1n99 717:1obz 711:1v1t 705:1ybo 699:1whd 693:2f5y 687:1v6b 681:1i16 675:1vb7 669:1rgw 663:1wf7 657:1n7e 651:1n7f 645:1v62 639:1x5r 633:1p1e 627:1p1d 621:1x45 615:1u3b 609:1u37 603:1u38 597:1b8q 591:1qau 585:1ufx 579:1wfg 573:1zub 567:2css 561:1m5z 555:2csj 549:1x6d 543:1uit 537:1uhp 531:1ihj 525:1x5n 519:1uf1 513:1uez 507:1mfl 501:1mfg 495:1n7t 489:1mc7 483:1l6o 477:1wi4 471:1uju 465:1q7x 459:3pdz 453:1d5g 447:1vj6 441:1ozi 435:1gm1 429:1wf8 423:1um1 417:1t2m 411:1x5q 405:1wha 399:1wi2 393:2fe5 387:2byg 381:1qlc 375:1zok 369:1kef 363:1iu0 357:1iu2 351:1um7 345:1tp3 339:1tp5 333:1bfe 327:1be9 321:1tq3 315:1pdr 309:1z87 303:1z86 297:2pdz 291:1qav 285:2cs5 279:1uew 273:1wfv 267:1uep 261:1q3p 255:1q3o 249:1g9o 243:1i92 237:1ujv 231:1ueq 225:1fc6 219:1fcf 213:1fc9 206:1fc7 200:1lcy 194:1l1j 169:PDBj 165:PDBe 148:ECOD 138:Pfam 102:1lcy 49:Pfam 27:GOPC 4333:YTH 4313:SUN 4308:SH3 4303:SH2 4288:PDZ 4281:LOV 4276:PAS 4266:LRR 4261:LIM 4231:EF1 4201:DEP 4184:DED 4164:CUT 4159:CUB 4154:CRM 4144:CBS 4114:BPS 4109:BMC 4104:BIR 4094:BEN 4089:BAR 4069:ACT 4059:ABM 3931:doi 3890:doi 3850:doi 3805:doi 3758:doi 3713:doi 3666:doi 3654:386 3613:doi 3569:doi 3524:doi 3520:131 3483:doi 3479:281 3442:PMC 3434:doi 3393:doi 3352:PMC 3344:doi 3303:PMC 3295:doi 3248:doi 3236:401 3203:PMC 3195:doi 3148:doi 3144:281 3105:doi 3060:doi 3004:doi 2992:386 2926:doi 2922:114 2880:doi 2868:382 2835:PMC 2825:doi 2786:doi 2749:PMC 2741:doi 2702:doi 2659:doi 2619:doi 2581:doi 2541:PMC 2533:doi 2529:392 2489:PMC 2479:doi 2429:PMC 2421:doi 2377:PMC 2367:doi 2090:RIL 2045:PRX 1526:ALP 873:PDZ 822:of 188:PDB 156:PDB 117:CDD 78:PDZ 43:PDZ 4355:: 4328:X8 4298:PX 4293:PH 4221:DM 4179:DD 4134:C2 4129:C1 4054:3H 3947:. 3939:. 3927:85 3925:. 3921:. 3904:. 3896:. 3886:19 3884:. 3856:. 3846:46 3844:. 3821:. 3813:. 3799:. 3795:. 3772:. 3764:. 3754:49 3752:. 3729:. 3721:. 3709:21 3707:. 3703:. 3680:. 3672:. 3664:. 3652:. 3629:. 3621:. 3609:20 3607:. 3603:. 3589:^ 3575:. 3565:46 3563:. 3540:. 3532:. 3518:. 3514:. 3491:. 3477:. 3473:. 3450:. 3440:. 3430:27 3428:. 3424:. 3401:. 3389:50 3387:. 3383:. 3360:. 3350:. 3340:24 3338:. 3334:. 3311:. 3301:. 3291:21 3289:. 3285:. 3262:. 3254:. 3246:. 3234:. 3211:. 3201:. 3191:35 3189:. 3185:. 3162:. 3154:. 3142:. 3119:. 3111:. 3101:19 3099:. 3076:. 3068:. 3056:85 3054:. 3050:. 3032:^ 3018:. 3010:. 3002:. 2990:. 2976:^ 2960:. 2946:^ 2932:. 2920:. 2908:^ 2894:. 2886:. 2878:. 2866:. 2843:. 2833:. 2819:. 2815:. 2792:. 2782:20 2780:. 2757:. 2747:. 2737:10 2735:. 2731:. 2708:. 2696:. 2673:. 2665:. 2653:. 2639:^ 2625:. 2615:20 2613:. 2601:^ 2587:. 2577:20 2575:. 2549:. 2539:. 2527:. 2523:. 2511:^ 2497:. 2487:. 2473:. 2469:. 2451:^ 2437:. 2427:. 2415:. 2411:. 2399:^ 2385:. 2375:. 2361:. 2357:. 1347:. 1311:. 1303:, 1275:. 1122:. 923:. 883:, 869:. 834:, 830:, 826:, 167:; 163:; 146:/ 108:/ 104:/ 4035:e 4028:t 4021:v 3955:. 3933:: 3912:. 3892:: 3864:. 3852:: 3829:. 3807:: 3801:7 3780:. 3760:: 3737:. 3715:: 3688:. 3668:: 3660:: 3637:. 3615:: 3583:. 3571:: 3548:. 3526:: 3499:. 3485:: 3458:. 3436:: 3409:. 3395:: 3368:. 3346:: 3319:. 3297:: 3270:. 3250:: 3242:: 3219:. 3197:: 3170:. 3150:: 3127:. 3107:: 3084:. 3062:: 3026:. 3006:: 2998:: 2970:. 2940:. 2928:: 2902:. 2882:: 2874:: 2851:. 2827:: 2821:5 2800:. 2788:: 2765:. 2743:: 2716:. 2704:: 2698:7 2681:. 2661:: 2655:9 2633:. 2621:: 2595:. 2583:: 2557:. 2535:: 2505:. 2481:: 2475:8 2445:. 2423:: 2417:6 2393:. 2369:: 2363:5 895:-

Index


GOPC
Pfam
PF00595
InterPro
IPR001478
SMART
PDZ
PROSITE
PDOC50106
SCOP2
1lcy
SCOPe
SUPFAM
CDD
cd00136
Pfam
structures
ECOD
PDB
RCSB PDB
PDBe
PDBj
PDBsum
structure summary
PDB
1l1j
1lcy
1fc7
1fc9

Text is available under the Creative Commons Attribution-ShareAlike License. Additional terms may apply.

↑