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Porphobilinogen deaminase

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303: 280: 1144: 177: 202: 1175: 568: 561: 554: 309: 208: 26: 1199:, an autosomal dominant genetic disorder where insufficient hydroxymethylbilane is produced, leading to a build-up of porphobilinogen in the cytoplasm. This is caused by a gene mutation that, in 90% of cases, causes decreased amounts of enzyme. However, mutations where less-active enzymes and/or different isoforms have been described. At least 115 disease-causing mutations in this gene have been discovered. 3142: 1186:
of ammonia from porphobilinogen, generating a carbocation intermediate (1). This intermediate is then attacked by the dipyrrole cofactor of porphobilinogen deaminase, which after losing a proton yields a trimer covalently bound to the enzyme (2). This intermediate is then open to further reaction
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The structure of 40-42 kDa porphobilinogen deaminase, which is highly conserved amongst organisms, consists of three domains. Domains 1 and 2 are structurally very similar: each consisting of five beta-sheets and three alpha helices in humans. Domain 3 is positioned between the other two and has a
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residues, positioned to face the active site from domains 1 and 2, have been shown to stabilize the carboxylate functionalities on the incoming porphobilinogen as well as the growing pyrrole chain. These structural features presumably favor the formation of the final hydroxymethylbilane product.
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Lannfelt L, Wetterberg L, Lilius L, Thunell S, Jörnvall H, Pavlu B, Wielburski A, Gellerfors P (November 1989). "Porphobilinogen deaminase in human erythrocytes: purification of two forms with apparent molecular weights of 40 kDa and 42 kDa".
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Louie GV, Brownlie PD, Lambert R, Cooper JB, Blundell TL, Wood SP, Warren MJ, Woodcock SC, Jordan PM (September 1992). "Structure of porphobilinogen deaminase reveals a flexible multidomain polymerase with a single catalytic site".
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Mgone CS, Lanyon WG, Moore MR, Connor JM (1992). "Detection of seven point mutations in the porphobilinogen deaminase gene in patients with acute intermittent porphyria, by direct sequencing of in vitro amplified cDNA".
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Hrdinka M, Puy H, Martasek P (2007). "May 2006 update in porphobilinogen deaminase gene polymorphisms and mutations causing acute intermittent porphyria: comparison with the situation in Slavic population".
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of this enzyme consisting of two condensed porphobilinogen molecules, is covalently attached to domain 3 and extends into the active site, the cleft between domains 1 and 2. Several positively charged
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Hessels J, Voortman G, van der Wagen A, et al. (2004). "Homozygous acute intermittent porphyria in a 7-year-old boy with massive excretions of porphyrins and porphyrin precursors".
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Pichon C, Clemens KR, Jacobson AR, Ian Scott A (June 1992). "On the mechanism of porphobilinogen deaminase. Design, synthesis, and enzymatic reactions of novel porphobilinogen analogs".
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Scobie GA, Llewellyn DH, Urquhart AJ, et al. (1990). "Acute intermittent porphyria caused by a C----T mutation that produces a stop codon in the porphobilinogen deaminase gene".
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with porphobilinogen (1 and 2 repeated three more times). Once a hexamer is formed, hydrolysis allows hydroxymethylbilane to be released, as well as cofactor regeneration (3).
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Namba H, Narahara K, Tsuji K, et al. (1991). "Assignment of human porphobilinogen deaminase to 11q24.1----q24.2 by in situ hybridization and gene dosage studies".
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Astrin KH, Desnick RJ (1995). "Molecular basis of acute intermittent porphyria: mutations and polymorphisms in the human hydroxymethylbilane synthase gene".
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Astrin KH, Desnick RJ (1994). "Molecular basis of acute intermittent porphyria: mutations and polymorphisms in the human hydroxymethylbilane synthase gene".
2110:"Molecular heterogeneity of acute intermittent porphyria: identification of four additional mutations resulting in the CRIM-negative subtype of the disease" 2488: 756: 2075:"High frequency of mutations in exon 10 of the porphobilinogen deaminase gene in patients with a CRIM-positive subtype of acute intermittent porphyria" 1634:"A point mutation G----A in exon 12 of the porphobilinogen deaminase gene results in exon skipping and is responsible for acute intermittent porphyria" 737: 2723: 138: 2803: 2217:
Tunnacliffe A, McGuire RS (1991). "A physical linkage group in human chromosome band 11q23 covering a region implicated in leukocyte neoplasia".
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Helliwell JR, Nieh YP, Habash J, et al. (2003). "Time-resolved and static-ensemble structural chemistry of hydroxymethylbilane synthase".
3162: 2481: 1275: 2174:"Identification of the most common mutation within the porphobilinogen deaminase gene in Swedish patients with acute intermittent porphyria" 1257: 2716: 1143: 2371:"A 5' splice-region G----C mutation in exon 1 of the human beta-globin gene inhibits pre-mRNA splicing: a mechanism for beta+-thalassemia" 2285:"Two different point G to A mutations in exon 10 of the porphobilinogen deaminase gene are responsible for acute intermittent porphyria" 988: 2436: 302: 2590: 2861: 2813: 1174: 995: 279: 2823: 1618: 1244: 1223: 2778: 2610: 201: 176: 3017: 1382: 1240: 49: 2768: 2585: 3132: 1726:"Refinement of evolutionary medicine predictions based on clinical evidence for the manifestations of Mendelian diseases" 1219: 2543: 1474:"Studies on the mechanism of hydroxymethylbilane synthase concerning the role of arginine residues in substrate binding" 1196: 118: 1381:
Gill R, Kolstoe SE, Mohammed F, Al D-Bass A, Mosely JE, Sarwar M, Cooper JB, Wood SP, Shoolingin-Jordan PM (May 2009).
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Functionally, porphobilinogen deaminase catalyzes the loss of ammonia from the porphobilinogen monomer (
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Grandchamp B, Picat C, de Rooij F, Beaumont C, Wilson P, Deybach JC, Nordmann Y (August 1989).
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Deybach JC, Puy H (1995). "Porphobilinogen deaminase gene structure and molecular defects".
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Leeper FJ (April 1989). "The biosynthesis of porphyrins, chlorophylls, and vitamin B12".
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National Center for Biotechnology Information, U.S. National Library of Medicine
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National Center for Biotechnology Information, U.S. National Library of Medicine
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Lander M, Pitt AR, Alefounder PR, Bardy D, Abell C, Battersby AR (April 1991).
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Kauppinen R (2004). "Molecular diagnostics of acute intermittent porphyria".
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biosynthetic pathway. It catalyzes the head to tail condensation of four
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GeneReviews/NCBI/NIH/UW entry on Hydroxymethylbilane Synthase Deficiency
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The most well-known health issue involving porphobilinogen deaminase is
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Battersby AR (December 2000). "Tetrapyrroles: the pigments of life".
1351: 1059: 1003: 723: 1994:"CRIM-positive mutations of acute intermittent porphyria in Finland" 3074: 2553: 2548: 2434: 1073:. Porphobilinogen deaminase is involved in the third step of the 686: 682: 2747: 2639: 2634: 2512: 1074: 1070: 122: 2843: 2712: 2477: 1162:
Porphobilinogen deaminase usually exists in dimer units in the
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Overview of all the structural information available in the
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Heme synthesis—note that some reactions occur in the
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Kauppinen R, Peltonen L, Pihlaja H, Mustajoki P (1993).
1108: 378: 109:, PBG-D, PBGD, PORC, UPS, hydroxymethylbilane synthase 3130: 2369:
Vidaud M, Gattoni R, Stevenin J, et al. (1989).
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Delfau MH, Picat C, de Rooij FW, et al. (1990).
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Delfau MH, Picat C, De Rooij F, et al. (1991).
3026: 2990: 2959: 2928: 2877: 2759: 2673: 2647: 2633: 2599: 2564: 2532: 2523: 2073:Gu XF, de Rooij F, Voortman G, et al. (1992). 960: 927: 897: 864: 1236: 1234: 1232: 1215: 1213: 1211: 1113: 662:porphyrin-containing compound biosynthetic process 2326:Raich N, Romeo PH, Dubart A, et al. (1986). 325: 224: 1619:"Entrez Gene: HMBS hydroxymethylbilane synthase" 1152:flattened beta-sheet geometry. A dipyrrole, a 1241:GRCm38: Ensembl release 89: ENSMUSG00000032126 2855: 2724: 2489: 8: 1220:GRCh38: Ensembl release 89: ENSG00000256269 2862: 2848: 2840: 2731: 2717: 2709: 2644: 2529: 2496: 2482: 2474: 697: 652:protoporphyrinogen IX biosynthetic process 592: 366: 265: 162: 60: 2404: 2394: 2351: 2308: 2199: 2189: 2125: 2090: 2009: 1757: 1724:Ĺ imÄŤĂ­ková D, Heneberg P (December 2019). 1657: 1497: 1440: 1182:The first step is believed to involve an 1106: 482:fetal liver hematopoietic progenitor cell 2804:Farnesyl-diphosphate farnesyltransferase 1069:) that in humans is encoded by the HMBS 3137: 1207: 1423:Jordan PM, Warren MJ (December 1987). 667:peptidyl-pyrromethane cofactor linkage 15: 615:hydroxymethylbilane synthase activity 330: 291: 286: 229: 188: 183: 7: 2466:(Porphobilinogen deaminase) at the 1114:{\displaystyle \rightleftharpoons } 2591:Uroporphyrinogen III decarboxylase 1910:10.1023/B:BOLI.0000016613.75677.05 957: 924: 894: 861: 837: 818: 792: 773: 747: 728: 548: 466: 404: 383: 14: 2814:Alkylglycerone phosphate synthase 657:tetrapyrrole biosynthetic process 3140: 2824:Geranylgeranyltransferase type 1 1147:Overall reaction of PB deaminase 566: 559: 552: 314: 307: 301: 278: 213: 206: 200: 175: 24: 2779:Methionine adenosyltransferase 2611:Coproporphyrinogen III oxidase 577:More reference expression data 532:More reference expression data 1: 2769:Dimethylallyltranstransferase 2586:Uroporphyrinogen III synthase 1867:: 131–44, discussion 171–90. 1535:10.1016/S0040-4020(01)81567-2 299: 198: 3163:Genes on human chromosome 11 2544:Aminolevulinic acid synthase 2375:Proc. Natl. Acad. Sci. U.S.A 2231:10.1016/0888-7543(90)90030-X 2178:Proc. Natl. Acad. Sci. U.S.A 1442:10.1016/0014-5793(87)81136-5 1197:acute intermittent porphyria 1178:Full PBG Deaminase Mechanism 1052:hydroxymethylbilane synthase 1296:Scand. J. Clin. Lab. Invest 1056:uroporphyrinogen I synthase 3184: 2616:Protoporphyrinogen oxidase 1750:10.1038/s41598-019-54976-4 1081:molecules into the linear 989:Chr 11: 119.08 – 119.09 Mb 432:mucosa of transverse colon 3018:Michaelis–Menten kinetics 2829:Porphobilinogen deaminase 2799:Glutathione S-transferase 2581:Porphobilinogen deaminase 2172:Lee JS, Anvret M (1992). 1308:10.3109/00365518909091544 1276:"Mouse PubMed Reference:" 1258:"Human PubMed Reference:" 1048:Porphobilinogen deaminase 1034: 1029: 1025: 1018: 1002: 983: 964: 931: 920: 901: 868: 857: 844: 840: 825: 821: 812: 799: 795: 780: 776: 767: 754: 750: 735: 731: 722: 707: 700: 696: 680: 672:heme biosynthetic process 595: 591: 574: 551: 542: 529: 478: 469: 416: 407: 377: 369: 365: 348: 335: 298: 277: 268: 264: 247: 234: 197: 174: 165: 161: 116: 113: 103: 96: 91: 68: 63: 46: 41: 36: 32: 23: 18: 2910:Diffusion-limited enzyme 2789:Dihydropteroate synthase 2576:Porphobilinogen synthase 2191:10.1073/pnas.88.23.10912 1947:10.1586/14737159.4.2.243 2686:glucuronosyltransferase 2011:10.1002/humu.1380010508 1836:10.1002/humu.1380040403 1695:10.1002/humu.1380040403 996:Chr 9: 44.25 – 44.26 Mb 2525:Porphyrin biosynthesis 2448: 2396:10.1073/pnas.86.3.1041 2344:10.1093/nar/14.15.5955 1973:Physiological Research 1935:Expert Rev. Mol. Diagn 1898:J. Inherit. Metab. Dis 1650:10.1093/nar/17.16.6637 1179: 1148: 1132:Structure and function 1115: 332:9 A5.2|9 24.84 cM 3003:Eadie–Hofstee diagram 2936:Allosteric regulation 2438: 2145:Cytogenet. Cell Genet 1787:J. Bioenerg. Biomembr 1177: 1146: 1116: 1085:while releasing four 191:Chromosome 11 (human) 3013:Lineweaver–Burk plot 2664:Biliverdin reductase 2535:early mitochondrial: 1979:(Suppl 2): S119–36. 1597:10.1039/NP9890600171 1105: 610:transferase activity 448:gastrocnemius muscle 293:Chromosome 9 (mouse) 64:List of PDB id codes 37:Available structures 2819:Farnesyltransferase 2794:Spermidine synthase 2784:Riboflavin synthase 2602:late mitochondrial: 2387:1989PNAS...86.1041V 1873:2003FaDi..122..131H 1861:Faraday Discussions 1742:2019NatSR...918577S 1344:1992Natur.359...33L 1122:hydroxymethylbilane 1083:hydroxymethylbilane 502:endocardial cushion 452:right lobe of liver 2972:Enzyme superfamily 2905:Enzyme promiscuity 2449: 2260:10.1007/BF00193588 2050:10.1007/BF00210738 1799:10.1007/BF02110034 1730:Scientific Reports 1402:10.1042/BJ20082077 1180: 1170:Reaction mechanism 1149: 1111: 802:ENSMUSG00000032126 645:Biological process 624:Cellular component 603:Molecular function 518:left lobe of liver 486:tibiofemoral joint 3128: 3127: 2837: 2836: 2809:Spermine synthase 2706: 2705: 2702: 2701: 2629: 2628: 2332:Nucleic Acids Res 2301:10.1172/JCI114869 2157:10.1159/000133123 2114:Am. J. Hum. Genet 2079:Am. J. Hum. Genet 1638:Nucleic Acids Res 1529:(23): 4687–4712. 1490:10.1042/bj2750447 1045: 1044: 1041: 1040: 1014: 1013: 979: 978: 954: 953: 916: 915: 891: 890: 853: 852: 834: 833: 808: 807: 789: 788: 763: 762: 744: 743: 692: 691: 587: 586: 583: 582: 538: 537: 525: 524: 463: 462: 428:bone marrow cells 361: 360: 260: 259: 87: 86: 83: 82: 47:Ortholog search: 3175: 3145: 3144: 3136: 3008:Hanes–Woolf plot 2951:Enzyme activator 2946:Enzyme inhibitor 2920:Enzyme catalysis 2864: 2857: 2850: 2841: 2733: 2726: 2719: 2710: 2678: 2652: 2645: 2635:Heme degradation 2604: 2569: 2537: 2530: 2507:involved in the 2498: 2491: 2484: 2475: 2443:and some in the 2418: 2408: 2398: 2365: 2355: 2322: 2312: 2279: 2242: 2213: 2203: 2193: 2168: 2139: 2129: 2104: 2094: 2069: 2031: 2013: 1988: 1966: 1929: 1892: 1881:10.1039/b201331b 1855: 1818: 1772: 1771: 1761: 1721: 1715: 1714: 1678: 1672: 1671: 1661: 1629: 1623: 1622: 1615: 1609: 1608: 1580: 1574: 1573: 1562:10.1039/b002635m 1545: 1539: 1538: 1518: 1512: 1511: 1501: 1469: 1463: 1462: 1444: 1420: 1414: 1413: 1387: 1378: 1372: 1371: 1352:10.1038/359033a0 1326: 1320: 1319: 1290: 1284: 1283: 1272: 1266: 1265: 1254: 1248: 1238: 1227: 1217: 1120: 1118: 1117: 1112: 1027: 1026: 998: 991: 974: 958: 949: 925: 921:RefSeq (protein) 911: 895: 886: 862: 838: 819: 793: 774: 748: 729: 698: 593: 579: 570: 563: 556: 549: 534: 474: 472:Top expressed in 467: 412: 410:Top expressed in 405: 384: 367: 357: 344: 333: 318: 311: 305: 294: 282: 266: 256: 243: 232: 217: 210: 204: 193: 179: 163: 157: 155:HMBS - orthologs 108: 101: 78: 61: 55: 34: 33: 28: 16: 3183: 3182: 3178: 3177: 3176: 3174: 3173: 3172: 3153: 3152: 3151: 3139: 3131: 3129: 3124: 3036:Oxidoreductases 3022: 2998:Enzyme kinetics 2986: 2982:List of enzymes 2955: 2924: 2895:Catalytic triad 2873: 2868: 2838: 2833: 2755: 2737: 2707: 2698: 2674: 2669: 2666: 2648: 2637: 2625: 2600: 2595: 2565: 2560: 2533: 2519: 2502: 2426: 2421: 2368: 2338:(15): 5955–68. 2325: 2289:J. Clin. Invest 2282: 2245: 2216: 2184:(23): 10912–5. 2171: 2142: 2107: 2072: 2034: 1991: 1969: 1932: 1895: 1858: 1821: 1784: 1780: 1778:Further reading 1775: 1723: 1722: 1718: 1680: 1679: 1675: 1644:(16): 6637–49. 1631: 1630: 1626: 1617: 1616: 1612: 1582: 1581: 1577: 1547: 1546: 1542: 1520: 1519: 1515: 1471: 1470: 1466: 1422: 1421: 1417: 1385: 1380: 1379: 1375: 1328: 1327: 1323: 1292: 1291: 1287: 1274: 1273: 1269: 1256: 1255: 1251: 1239: 1230: 1218: 1209: 1205: 1193: 1172: 1134: 1127: 1103: 1102: 1100: 1095:porphobilinogen 1079:porphobilinogen 1036:View/Edit Mouse 1031:View/Edit Human 994: 987: 984:Location (UCSC) 970: 966: 945: 941: 937: 933: 907: 903: 882: 878: 874: 870: 783:ENSG00000256269 676: 640: 619: 575: 565: 564: 558: 557: 530: 521: 516: 512: 508: 504: 500: 496: 492: 488: 484: 470: 459: 454: 450: 446: 442: 440:muscle of thigh 438: 434: 430: 426: 422: 420:trabecular bone 408: 352: 339: 331: 321: 320: 319: 312: 292: 269:Gene location ( 251: 238: 230: 220: 219: 218: 211: 189: 166:Gene location ( 117: 104: 97: 70: 48: 12: 11: 5: 3181: 3179: 3171: 3170: 3165: 3155: 3154: 3150: 3149: 3126: 3125: 3123: 3122: 3109: 3096: 3083: 3070: 3057: 3044: 3030: 3028: 3024: 3023: 3021: 3020: 3015: 3010: 3005: 3000: 2994: 2992: 2988: 2987: 2985: 2984: 2979: 2974: 2969: 2963: 2961: 2960:Classification 2957: 2956: 2954: 2953: 2948: 2943: 2938: 2932: 2930: 2926: 2925: 2923: 2922: 2917: 2912: 2907: 2902: 2897: 2892: 2887: 2881: 2879: 2875: 2874: 2869: 2867: 2866: 2859: 2852: 2844: 2835: 2834: 2832: 2831: 2826: 2821: 2816: 2811: 2806: 2801: 2796: 2791: 2786: 2781: 2776: 2771: 2765: 2763: 2757: 2756: 2738: 2736: 2735: 2728: 2721: 2713: 2704: 2703: 2700: 2699: 2697: 2696: 2695: 2694: 2681: 2679: 2671: 2670: 2668: 2667: 2661: 2659:Heme oxygenase 2655: 2653: 2642: 2631: 2630: 2627: 2626: 2624: 2623: 2621:Ferrochelatase 2618: 2613: 2607: 2605: 2597: 2596: 2594: 2593: 2588: 2583: 2578: 2572: 2570: 2562: 2561: 2559: 2558: 2557: 2556: 2551: 2540: 2538: 2527: 2521: 2520: 2503: 2501: 2500: 2493: 2486: 2478: 2472: 2471: 2433: 2432: 2425: 2424:External links 2422: 2420: 2419: 2366: 2323: 2280: 2243: 2214: 2169: 2151:(2–3): 105–8. 2140: 2105: 2070: 2032: 1989: 1967: 1930: 1893: 1856: 1819: 1793:(2): 197–205. 1781: 1779: 1776: 1774: 1773: 1716: 1673: 1624: 1610: 1591:(2): 171–203. 1575: 1540: 1513: 1464: 1435:(1–2): 87–92. 1415: 1373: 1338:(6390): 33–9. 1321: 1285: 1267: 1249: 1228: 1206: 1204: 1201: 1192: 1189: 1184:E1 elimination 1171: 1168: 1133: 1130: 1129: 1128: 1125: 1110: 1098: 1043: 1042: 1039: 1038: 1033: 1023: 1022: 1016: 1015: 1012: 1011: 1009: 1007: 1000: 999: 992: 985: 981: 980: 977: 976: 962: 961: 955: 952: 951: 929: 928: 922: 918: 917: 914: 913: 899: 898: 892: 889: 888: 866: 865: 859: 855: 854: 851: 850: 842: 841: 835: 832: 831: 823: 822: 816: 810: 809: 806: 805: 797: 796: 790: 787: 786: 778: 777: 771: 765: 764: 761: 760: 752: 751: 745: 742: 741: 733: 732: 726: 720: 719: 714: 709: 705: 704: 694: 693: 690: 689: 678: 677: 675: 674: 669: 664: 659: 654: 648: 646: 642: 641: 639: 638: 633: 627: 625: 621: 620: 618: 617: 612: 606: 604: 600: 599: 589: 588: 585: 584: 581: 580: 572: 571: 546: 540: 539: 536: 535: 527: 526: 523: 522: 520: 519: 515: 511: 510:abdominal wall 507: 503: 499: 495: 491: 487: 483: 479: 476: 475: 464: 461: 460: 458: 457: 453: 449: 445: 441: 437: 433: 429: 425: 421: 417: 414: 413: 401: 400: 392: 381: 375: 374: 371:RNA expression 363: 362: 359: 358: 350: 346: 345: 337: 334: 329: 323: 322: 313: 306: 300: 296: 295: 290: 284: 283: 275: 274: 262: 261: 258: 257: 249: 245: 244: 236: 233: 228: 222: 221: 212: 205: 199: 195: 194: 187: 181: 180: 172: 171: 159: 158: 115: 111: 110: 102: 94: 93: 89: 88: 85: 84: 81: 80: 66: 65: 57: 56: 45: 39: 38: 30: 29: 21: 20: 13: 10: 9: 6: 4: 3: 2: 3180: 3169: 3166: 3164: 3161: 3160: 3158: 3148: 3143: 3138: 3134: 3120: 3116: 3115: 3110: 3107: 3103: 3102: 3097: 3094: 3090: 3089: 3084: 3081: 3077: 3076: 3071: 3068: 3064: 3063: 3058: 3055: 3051: 3050: 3045: 3042: 3038: 3037: 3032: 3031: 3029: 3025: 3019: 3016: 3014: 3011: 3009: 3006: 3004: 3001: 2999: 2996: 2995: 2993: 2989: 2983: 2980: 2978: 2977:Enzyme family 2975: 2973: 2970: 2968: 2965: 2964: 2962: 2958: 2952: 2949: 2947: 2944: 2942: 2941:Cooperativity 2939: 2937: 2934: 2933: 2931: 2927: 2921: 2918: 2916: 2913: 2911: 2908: 2906: 2903: 2901: 2900:Oxyanion hole 2898: 2896: 2893: 2891: 2888: 2886: 2883: 2882: 2880: 2876: 2872: 2865: 2860: 2858: 2853: 2851: 2846: 2845: 2842: 2830: 2827: 2825: 2822: 2820: 2817: 2815: 2812: 2810: 2807: 2805: 2802: 2800: 2797: 2795: 2792: 2790: 2787: 2785: 2782: 2780: 2777: 2775: 2772: 2770: 2767: 2766: 2764: 2762: 2758: 2753: 2749: 2745: 2741: 2734: 2729: 2727: 2722: 2720: 2715: 2714: 2711: 2693: 2690: 2689: 2688: 2687: 2683: 2682: 2680: 2677: 2672: 2665: 2662: 2660: 2657: 2656: 2654: 2651: 2646: 2643: 2641: 2636: 2632: 2622: 2619: 2617: 2614: 2612: 2609: 2608: 2606: 2603: 2598: 2592: 2589: 2587: 2584: 2582: 2579: 2577: 2574: 2573: 2571: 2568: 2563: 2555: 2552: 2550: 2547: 2546: 2545: 2542: 2541: 2539: 2536: 2531: 2528: 2526: 2522: 2518: 2514: 2510: 2506: 2499: 2494: 2492: 2487: 2485: 2480: 2479: 2476: 2469: 2465: 2464: 2459: 2455: 2451: 2450: 2446: 2445:mitochondrion 2442: 2437: 2431: 2428: 2427: 2423: 2416: 2412: 2407: 2402: 2397: 2392: 2388: 2384: 2381:(3): 1041–5. 2380: 2376: 2372: 2367: 2363: 2359: 2354: 2349: 2345: 2341: 2337: 2333: 2329: 2324: 2320: 2316: 2311: 2306: 2302: 2298: 2295:(5): 1511–6. 2294: 2290: 2286: 2281: 2277: 2273: 2269: 2265: 2261: 2257: 2253: 2249: 2244: 2240: 2236: 2232: 2228: 2225:(3): 447–53. 2224: 2220: 2215: 2211: 2207: 2202: 2197: 2192: 2187: 2183: 2179: 2175: 2170: 2166: 2162: 2158: 2154: 2150: 2146: 2141: 2137: 2133: 2128: 2123: 2119: 2115: 2111: 2106: 2102: 2098: 2093: 2088: 2084: 2080: 2076: 2071: 2067: 2063: 2059: 2055: 2051: 2047: 2044:(1–2): 12–6. 2043: 2039: 2033: 2029: 2025: 2021: 2017: 2012: 2007: 2003: 1999: 1995: 1990: 1986: 1982: 1978: 1974: 1968: 1964: 1960: 1956: 1952: 1948: 1944: 1940: 1936: 1931: 1927: 1923: 1919: 1915: 1911: 1907: 1903: 1899: 1894: 1890: 1886: 1882: 1878: 1874: 1870: 1866: 1862: 1857: 1853: 1849: 1845: 1841: 1837: 1833: 1830:(4): 243–52. 1829: 1825: 1820: 1816: 1812: 1808: 1804: 1800: 1796: 1792: 1788: 1783: 1782: 1777: 1769: 1765: 1760: 1755: 1751: 1747: 1743: 1739: 1735: 1731: 1727: 1720: 1717: 1712: 1708: 1704: 1700: 1696: 1692: 1689:(4): 243–52. 1688: 1684: 1677: 1674: 1669: 1665: 1660: 1655: 1651: 1647: 1643: 1639: 1635: 1628: 1625: 1620: 1614: 1611: 1606: 1602: 1598: 1594: 1590: 1586: 1579: 1576: 1571: 1567: 1563: 1559: 1556:(6): 507–26. 1555: 1551: 1544: 1541: 1536: 1532: 1528: 1524: 1517: 1514: 1509: 1505: 1500: 1495: 1491: 1487: 1484:(2): 447–52. 1483: 1479: 1475: 1468: 1465: 1460: 1456: 1452: 1448: 1443: 1438: 1434: 1430: 1426: 1419: 1416: 1411: 1407: 1403: 1399: 1395: 1391: 1384: 1377: 1374: 1369: 1365: 1361: 1357: 1353: 1349: 1345: 1341: 1337: 1333: 1325: 1322: 1317: 1313: 1309: 1305: 1302:(7): 677–84. 1301: 1297: 1289: 1286: 1281: 1277: 1271: 1268: 1263: 1259: 1253: 1250: 1246: 1242: 1237: 1235: 1233: 1229: 1225: 1221: 1216: 1214: 1212: 1208: 1202: 1200: 1198: 1190: 1188: 1185: 1176: 1169: 1167: 1166:of the cell. 1165: 1160: 1155: 1145: 1141: 1139: 1131: 1123: 1096: 1092: 1091: 1090: 1088: 1084: 1080: 1076: 1072: 1068: 1065: 1061: 1057: 1053: 1049: 1037: 1032: 1028: 1024: 1021: 1017: 1010: 1008: 1005: 1001: 997: 993: 990: 986: 982: 975: 973: 969: 963: 959: 956: 950: 948: 944: 940: 936: 930: 926: 923: 919: 912: 910: 906: 900: 896: 893: 887: 885: 881: 877: 873: 867: 863: 860: 858:RefSeq (mRNA) 856: 849: 848: 843: 839: 836: 830: 829: 824: 820: 817: 815: 811: 804: 803: 798: 794: 791: 785: 784: 779: 775: 772: 770: 766: 759: 758: 753: 749: 746: 740: 739: 734: 730: 727: 725: 721: 718: 715: 713: 710: 706: 703: 699: 695: 688: 684: 679: 673: 670: 668: 665: 663: 660: 658: 655: 653: 650: 649: 647: 644: 643: 637: 634: 632: 629: 628: 626: 623: 622: 616: 613: 611: 608: 607: 605: 602: 601: 598: 597:Gene ontology 594: 590: 578: 573: 569: 562: 555: 550: 547: 545: 541: 533: 528: 517: 513: 509: 505: 501: 498:body of femur 497: 493: 489: 485: 481: 480: 477: 473: 468: 465: 455: 451: 447: 444:apex of heart 443: 439: 435: 431: 427: 423: 419: 418: 415: 411: 406: 403: 402: 399: 397: 393: 391: 390: 386: 385: 382: 380: 376: 372: 368: 364: 356: 351: 347: 343: 338: 328: 324: 317: 310: 304: 297: 289: 285: 281: 276: 272: 267: 263: 255: 250: 246: 242: 237: 227: 223: 216: 209: 203: 196: 192: 186: 182: 178: 173: 169: 164: 160: 156: 152: 148: 144: 140: 136: 132: 128: 124: 120: 112: 107: 100: 95: 90: 79: 77: 73: 67: 62: 59: 58: 54: 51: 44: 40: 35: 31: 27: 22: 17: 3114:Translocases 3111: 3098: 3085: 3072: 3059: 3049:Transferases 3046: 3033: 2890:Binding site 2828: 2774:Thiaminase I 2740:Transferases 2684: 2675: 2649: 2601: 2580: 2566: 2534: 2461: 2378: 2374: 2335: 2331: 2292: 2288: 2254:(6): 631–4. 2251: 2247: 2222: 2218: 2181: 2177: 2148: 2144: 2120:(2): 421–8. 2117: 2113: 2085:(3): 660–5. 2082: 2078: 2041: 2037: 2004:(5): 392–6. 2001: 1997: 1976: 1972: 1941:(2): 243–9. 1938: 1934: 1904:(1): 19–27. 1901: 1897: 1864: 1860: 1827: 1823: 1790: 1786: 1736:(1): 18577. 1733: 1729: 1719: 1686: 1682: 1676: 1641: 1637: 1627: 1613: 1588: 1585:Nat Prod Rep 1584: 1578: 1553: 1550:Nat Prod Rep 1549: 1543: 1526: 1522: 1516: 1481: 1477: 1467: 1432: 1428: 1418: 1396:(1): 17–25. 1393: 1389: 1376: 1335: 1331: 1324: 1299: 1295: 1288: 1279: 1270: 1261: 1252: 1194: 1181: 1150: 1135: 1055: 1051: 1047: 1046: 968:NP_001103721 965: 947:NP_001245138 943:NP_001245137 939:NP_001019553 932: 905:NM_001110251 902: 884:NM_001258209 880:NM_001258208 876:NM_001024382 869: 845: 826: 800: 781: 755: 736: 716: 711: 514:right kidney 394: 387: 252:119,093,834 239:119,084,866 114:External IDs 69: 2885:Active site 1523:Tetrahedron 1138:deamination 1089:molecules: 490:human fetus 424:bone marrow 353:44,255,525 340:44,247,636 92:Identifiers 3157:Categories 3088:Isomerases 3062:Hydrolases 2929:Regulation 2567:cytosolic: 2509:metabolism 2248:Hum. Genet 2038:Hum. Genet 1998:Hum. Mutat 1824:Hum. Mutat 1683:Hum. Mutat 1478:Biochem. J 1390:Biochem. J 1247:, May 2017 1226:, May 2017 1203:References 398:(ortholog) 135:HomoloGene 2967:EC number 2517:porphyrin 2441:cytoplasm 1429:FEBS Lett 1191:Pathology 1164:cytoplasm 1109:⇌ 972:NP_038579 935:NP_000181 909:NM_013551 872:NM_000190 702:Orthologs 636:cytoplasm 143:GeneCards 3168:EC 2.5.1 2991:Kinetics 2915:Cofactor 2878:Activity 2447:(yellow) 2276:28858687 2219:Genomics 2066:19680295 2028:10575526 1985:17298216 1963:21392441 1955:14995910 1918:14970743 1889:12555854 1852:24402776 1815:41764609 1768:31819097 1711:24402776 1570:11152419 1459:13483654 1410:19207107 1243:– 1222:– 1159:arginine 1154:cofactor 1067:2.5.1.61 1058:) is an 1020:Wikidata 681:Sources: 506:yolk sac 3147:Biology 3101:Ligases 2871:Enzymes 2650:spleen: 2505:Enzymes 2468:PDBe-KB 2458:UniProt 2415:2915972 2383:Bibcode 2362:2875434 2319:2243128 2268:2227955 2239:1981047 2210:1961762 2165:1914516 2136:1714233 2127:1683312 2101:1496994 2092:1682727 2058:1427766 2020:1301948 1926:9504522 1869:Bibcode 1844:7866402 1807:7592566 1759:6901466 1738:Bibcode 1703:7866402 1668:2789372 1605:2664584 1508:2025226 1499:1150073 1451:3079571 1368:4264432 1360:1522882 1340:Bibcode 1316:2609111 1245:Ensembl 1224:Ensembl 1087:ammonia 814:UniProt 769:Ensembl 708:Species 687:QuickGO 631:cytosol 373:pattern 231:11q23.3 99:Aliases 3133:Portal 3075:Lyases 2692:UGT1A1 2676:liver: 2463:P08397 2413:  2406:286617 2403:  2360:  2353:311614 2350:  2317:  2310:296897 2307:  2274:  2266:  2237:  2208:  2198:  2163:  2134:  2124:  2099:  2089:  2064:  2056:  2026:  2018:  1983:  1961:  1953:  1924:  1916:  1887:  1850:  1842:  1813:  1805:  1766:  1756:  1709:  1701:  1666:  1659:318356 1656:  1603:  1568:  1506:  1496:  1457:  1449:  1408:  1366:  1358:  1332:Nature 1314:  1124:+ 4 NH 1060:enzyme 1006:search 1004:PubMed 847:P22907 828:P08397 724:Entrez 544:BioGPS 494:spleen 456:rectum 123:609806 3027:Types 2761:2.5.1 2744:alkyl 2554:ALAS2 2549:ALAS1 2272:S2CID 2201:53042 2062:S2CID 2024:S2CID 1959:S2CID 1922:S2CID 1848:S2CID 1811:S2CID 1707:S2CID 1455:S2CID 1386:(PDF) 1364:S2CID 1054:, or 757:15288 717:Mouse 712:Human 683:Amigo 436:gonad 396:Mouse 389:Human 336:Start 271:Mouse 235:Start 168:Human 131:96112 3119:list 3112:EC7 3106:list 3099:EC6 3093:list 3086:EC5 3080:list 3073:EC4 3067:list 3060:EC3 3054:list 3047:EC2 3041:list 3034:EC1 2754:2.5) 2748:aryl 2746:and 2640:bile 2515:and 2513:heme 2456:for 2411:PMID 2358:PMID 2315:PMID 2264:PMID 2235:PMID 2206:PMID 2161:PMID 2132:PMID 2097:PMID 2054:PMID 2016:PMID 1981:PMID 1951:PMID 1914:PMID 1885:PMID 1840:PMID 1803:PMID 1764:PMID 1699:PMID 1664:PMID 1601:PMID 1566:PMID 1504:PMID 1447:PMID 1406:PMID 1356:PMID 1312:PMID 1075:heme 1071:gene 738:3145 379:Bgee 327:Band 288:Chr. 226:Band 185:Chr. 147:HMBS 119:OMIM 106:HMBS 76:3EQ1 72:3ECR 53:RCSB 50:PDBe 19:HMBS 2638:to 2511:of 2454:PDB 2401:PMC 2391:doi 2348:PMC 2340:doi 2305:PMC 2297:doi 2256:doi 2227:doi 2196:PMC 2186:doi 2153:doi 2122:PMC 2087:PMC 2046:doi 2006:doi 1943:doi 1906:doi 1877:doi 1865:122 1832:doi 1795:doi 1754:PMC 1746:doi 1691:doi 1654:PMC 1646:doi 1593:doi 1558:doi 1531:doi 1494:PMC 1486:doi 1482:275 1437:doi 1433:225 1398:doi 1394:420 1348:doi 1336:359 1304:doi 1097:+ H 349:End 248:End 151:OMA 139:158 127:MGI 43:PDB 3159:: 2752:EC 2742:: 2460:: 2409:. 2399:. 2389:. 2379:86 2377:. 2373:. 2356:. 2346:. 2336:14 2334:. 2330:. 2313:. 2303:. 2293:86 2291:. 2287:. 2270:. 2262:. 2252:85 2250:. 2233:. 2221:. 2204:. 2194:. 2182:88 2180:. 2176:. 2159:. 2149:57 2147:. 2130:. 2118:49 2116:. 2112:. 2095:. 2083:51 2081:. 2077:. 2060:. 2052:. 2042:90 2040:. 2022:. 2014:. 2000:. 1996:. 1977:55 1975:. 1957:. 1949:. 1937:. 1920:. 1912:. 1902:27 1900:. 1883:. 1875:. 1863:. 1846:. 1838:. 1826:. 1809:. 1801:. 1791:27 1789:. 1762:. 1752:. 1744:. 1732:. 1728:. 1705:. 1697:. 1685:. 1662:. 1652:. 1642:17 1640:. 1636:. 1599:. 1587:. 1564:. 1554:17 1552:. 1527:48 1525:. 1502:. 1492:. 1480:. 1476:. 1453:. 1445:. 1431:. 1427:. 1404:. 1392:. 1388:. 1362:. 1354:. 1346:. 1334:. 1310:. 1300:49 1298:. 1278:. 1260:. 1231:^ 1210:^ 1101:O 1093:4 1064:EC 685:/ 355:bp 342:bp 254:bp 241:bp 149:; 145:: 141:; 137:: 133:; 129:: 125:; 121:: 74:, 3135:: 3121:) 3117:( 3108:) 3104:( 3095:) 3091:( 3082:) 3078:( 3069:) 3065:( 3056:) 3052:( 3043:) 3039:( 2863:e 2856:t 2849:v 2750:( 2732:e 2725:t 2718:v 2497:e 2490:t 2483:v 2470:. 2417:. 2393:: 2385:: 2364:. 2342:: 2321:. 2299:: 2278:. 2258:: 2241:. 2229:: 2223:8 2212:. 2188:: 2167:. 2155:: 2138:. 2103:. 2068:. 2048:: 2030:. 2008:: 2002:1 1987:. 1965:. 1945:: 1939:4 1928:. 1908:: 1891:. 1879:: 1871:: 1854:. 1834:: 1828:4 1817:. 1797:: 1770:. 1748:: 1740:: 1734:9 1713:. 1693:: 1687:4 1670:. 1648:: 1621:. 1607:. 1595:: 1589:6 1572:. 1560:: 1537:. 1533:: 1510:. 1488:: 1461:. 1439:: 1412:. 1400:: 1370:. 1350:: 1342:: 1318:. 1306:: 1282:. 1264:. 1126:3 1099:2 1062:( 1050:( 273:) 170:) 153::

Index


PDB
PDBe
RCSB
3ECR
3EQ1
Aliases
HMBS
OMIM
609806
MGI
96112
HomoloGene
158
GeneCards
HMBS
OMA
HMBS - orthologs
Human
Chromosome 11 (human)
Chr.
Chromosome 11 (human)
Chromosome 11 (human)
Genomic location for HMBS
Genomic location for HMBS
Band
bp
bp
Mouse
Chromosome 9 (mouse)

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