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Bacteriophage Qbeta

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42: 383: 82: 51: 267: 409:, the maturation protein is called the A protein, as it belongs to the first open reading frame in the viral RNA. In Qβ the A protein was initially thought to be A1, as it is more abundant within the virion and is also required for infection. However, once the sequence of Qβ was determined, A1 was revealed to be a readthrough of the leaky stop codon. 373:
for both the replicase and the RNA product. In fact, pure Qbeta polymerase is not soluble enough to be produced in large quantities, and a fusion protein constructed from the replicase and the two EF subunits is usually used instead. The fusion can function independently of ribosomal protein S1.
283:, depending on the source which sequenced the virus. Qβ has been isolated all over the world, multiple times, with various subspecies that code for nearly identical proteins but can have very different nucleotide sequences. 441:
in experiments that favored faster replication, and thus shorter strands of RNA. He ended up with Spiegelman's Monster, a minimal RNA chain of only 218 nucleotides that can be replicated by Qβ replicase.
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Kita H, Cho J, Matsuura T, Nakaishi T, Taniguchi I, Ichikawa T, Shima Y, Urabe I, Yomo T (May 2006). "Functional Qbeta replicase genetically fusing essential subunits EF-Ts and EF-Tu with beta-subunit".
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The RNA-dependent RNA polymerase that replicates both the positive and negative RNA strands is a complex of four proteins: the catalytic beta subunit (replicase,
1020: 340:) is encoded by the phage, while the other three subunits are encoded by the bacterial genome: alpha subunit (ribosomal protein S1), gamma subunit ( 402:, the maturation protein was shown to be taken up by the host along with the viral RNA and the maturation protein was subsequently cleaved. 759:
Moore CH, Farron F, Bohnert D, Weissmann C (September 1971). "Possible origin of a minor virus specific protein (A1) in Q-beta particles".
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Paranchych W, Ainsworth SK, Dick AJ, Krahn PM (September 1971). "Stages in phage R17 infection. V. Phage eclipse and the role of F pili".
839:"Structures of Qβ virions, virus-like particles, and the Qβ-MurA complex reveal internal coat proteins and the mechanism of host lysis" 902: 580: 700: 460:"Asymmetric cryo-EM structure of the canonical Allolevivirus Qβ reveals a single maturation protein and the genomic ssRNA in situ" 41: 58: 683:
Rūmnieks J, Tārs K (2018). "Protein-RNA Interactions in the Single-Stranded RNA Bacteriophages". In Harris RJ, Bhella D (eds.).
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Winter RB, Gold L (July 1983). "Overproduction of bacteriophage Q beta maturation (A2) protein leads to cell lysis".
1025: 81: 514:"Ongoing phenotypic and genomic changes in experimental coevolution of RNA bacteriophage Qβ and Escherichia coli" 235: 1048: 432: 919: 893: 1053: 423:
by binding to MurA, which catalyzes the first enzymatically committed step in cell wall biosynthesis.
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in the maturation protein are unable to infect their host, or are 'immature.' For the related +ssRNA
76: 598:"Assembly of Q{beta} viral RNA polymerase with host translational elongation factors EF-Tu and -Ts" 370: 382: 819: 287: 956: 572: 390:
All positive-strand RNA phages encode a maturation protein, whose function is to bind the host
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van Duin J, Tsareva N (2006). "Single-stranded RNA phages. Chapter 15". In Calendar RL (ed.).
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A2 is the maturation protein for Qβ and has an additional role of being the lysis protein.
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Cui Z, Gorzelnik KV, Chang JY, Langlais C, Jakana J, Young R, Zhang J (October 2017).
234:), commonly referred to as Qbeta or Qβ, is a species consisting of several strains of 1042: 807: 737: 565: 420: 352: 260: 142: 130: 118: 823: 1012: 983: 166: 154: 266: 692: 530: 992: 687:. Subcellular Biochemistry. Vol. 88. Springer Singapore. pp. 281–303. 326:
There are approximately 178 copies of the coat protein and/or A1 in the capsid.
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Proceedings of the National Academy of Sciences of the United States of America
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Proceedings of the National Academy of Sciences of the United States of America
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Proceedings of the National Academy of Sciences of the United States of America
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Gorzelnik KV, Cui Z, Reed CA, Jakana J, Young R, Zhang J (October 2016).
336: 310:(RdRp) termed the replicase. The genome is highly structured, regulating 239: 661: 291: 67: 365: 361: 299: 270:
Schematic drawing of a levivirus virion (cross section and side view)
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Qβ enters its host cell after binding to the side of the F-pilus.
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and the viral RNA. The maturation protein is named thus, as
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in the coat protein, called A1; and the β-subunit of an
571:(Second ed.). Oxford University Press. pp.  967: 926: 507: 505: 415:The mechanism of lysis is similar to that of 8: 914: 49: 40: 29: 864: 854: 685:Virus Protein and Nucleoprotein Complexes 623: 613: 539: 529: 485: 475: 369:​). The two EF proteins serve as a 650:Journal of Bioscience and Bioengineering 596:Takeshita D, Tomita K (September 2010). 279:The genome of Qβ is approximately 4,217 252:. Its linear genome is packaged into an 450: 437:RNA from Bacteriophage Qβ was used by 7: 61:of bacteriophage Qβ attached to the 512:Kashiwagi A, Yomo T (August 2011). 302:protein; a readthrough of a leaky 25: 314:and protecting itself from host 80: 419:; A2 inhibits the formation of 259:with a diameter of 28 nm. 386:Life cycle of bacteriophage Qβ 1: 897:. Houghton Mifflin Harcourt. 808:10.1016/0092-8674(83)90030-2 738:10.1016/0042-6822(71)90176-0 693:10.1007/978-981-10-8456-0_13 531:10.1371/journal.pgen.1002188 308:RNA-dependent RNA-polymerase 378:Maturation/lysis protein A2 351:The structure of the Qbeta 1070: 928:Enterobacteria phage Qbeta 430: 236:positive-strand RNA virus 205: 200: 75: 57: 48: 39: 32: 211:Enterobacteria phage MX1 208:Enterobacteria phage M11 999:Escherichia virus Qbeta 856:10.1073/pnas.1707102114 615:10.1073/pnas.1006559107 477:10.1073/pnas.1609482113 217:Enterobacteria phage VK 214:Enterobacteria phage ST 773:10.1038/newbio234204a0 387: 344:), and delta subunit ( 271: 385: 286:The genome has three 269: 891:; Wong, Yan (2016). 433:Spiegelman's monster 77:Virus classification 894:The Ancestor's Tale 849:(44): 11697–11702. 662:10.1263/jbb.101.421 470:(41): 11519–11524. 288:open reading frames 226:Bacteriophage Qbeta 567:The Bacteriophages 388: 272: 1036: 1035: 920:Taxon identifiers 407:bacteriophage MS2 400:bacteriophage MS2 355:has been solved ( 294:: the maturation/ 290:that encode four 223: 222: 16:(Redirected from 1061: 1029: 1028: 1016: 1015: 1003: 1002: 1001: 988: 987: 986: 960: 959: 947: 946: 945: 915: 909: 908: 889:Dawkins, Richard 885: 879: 878: 868: 858: 834: 828: 827: 791: 785: 784: 756: 750: 749: 721: 715: 714: 680: 674: 673: 644: 638: 637: 627: 617: 593: 587: 586: 570: 560: 554: 553: 543: 533: 509: 500: 499: 489: 479: 455: 368: 339: 298:protein A2; the 249:Escherichia coli 246:, most commonly 85: 84: 53: 44: 30: 27:Species of virus 21: 1069: 1068: 1064: 1063: 1062: 1060: 1059: 1058: 1039: 1038: 1037: 1032: 1024: 1019: 1011: 1006: 997: 996: 991: 982: 981: 976: 969:Qubevirus durum 963: 955: 950: 941: 940: 935: 922: 912: 905: 887: 886: 882: 836: 835: 831: 793: 792: 788: 758: 757: 753: 723: 722: 718: 703: 682: 681: 677: 646: 645: 641: 608:(36): 15733–8. 595: 594: 590: 583: 562: 561: 557: 524:(8): e1002188. 511: 510: 503: 457: 456: 452: 448: 435: 429: 380: 356: 335: 332: 324: 322:Coat protein A1 312:gene expression 277: 231:Qubevirus durum 201:Member viruses 196: 193:Qubevirus durum 79: 71:and its genome 34:Qubevirus durum 28: 23: 22: 18:Qubevirus durum 15: 12: 11: 5: 1067: 1065: 1057: 1056: 1051: 1049:Bacteriophages 1041: 1040: 1034: 1033: 1031: 1030: 1017: 1004: 989: 973: 971: 965: 964: 962: 961: 948: 932: 930: 924: 923: 918: 911: 910: 904:978-0544859937 903: 880: 829: 786: 751: 716: 701: 675: 639: 588: 582:978-0195148503 581: 555: 501: 449: 447: 444: 439:Sol Spiegelman 431:Main article: 428: 425: 379: 376: 331: 330:Replicase/RdRp 328: 323: 320: 276: 273: 238:which infects 221: 220: 219: 218: 215: 212: 209: 203: 202: 198: 197: 190: 188: 184: 183: 176: 172: 171: 164: 160: 159: 152: 148: 147: 140: 136: 135: 128: 124: 123: 116: 112: 111: 104: 97: 96: 91: 87: 86: 73: 72: 55: 54: 46: 45: 37: 36: 26: 24: 14: 13: 10: 9: 6: 4: 3: 2: 1066: 1055: 1052: 1050: 1047: 1046: 1044: 1027: 1022: 1018: 1014: 1009: 1005: 1000: 994: 990: 985: 979: 975: 974: 972: 970: 966: 958: 953: 949: 944: 938: 934: 933: 931: 929: 925: 921: 916: 906: 900: 896: 895: 890: 884: 881: 876: 872: 867: 862: 857: 852: 848: 844: 840: 833: 830: 825: 821: 817: 813: 809: 805: 802:(3): 877–85. 801: 797: 790: 787: 782: 778: 774: 770: 767:(50): 204–6. 766: 762: 755: 752: 747: 743: 739: 735: 732:(3): 615–28. 731: 727: 720: 717: 712: 708: 704: 702:9789811084553 698: 694: 690: 686: 679: 676: 671: 667: 663: 659: 655: 651: 643: 640: 635: 631: 626: 621: 616: 611: 607: 603: 599: 592: 589: 584: 578: 574: 569: 568: 559: 556: 551: 547: 542: 537: 532: 527: 523: 519: 518:PLOS Genetics 515: 508: 506: 502: 497: 493: 488: 483: 478: 473: 469: 465: 461: 454: 451: 445: 443: 440: 434: 426: 424: 422: 421:peptidoglycan 418: 413: 410: 408: 403: 401: 397: 396:amber mutants 393: 384: 377: 375: 372: 367: 363: 359: 354: 353:RNA replicase 349: 347: 343: 338: 329: 327: 321: 319: 317: 313: 309: 305: 301: 297: 293: 289: 284: 282: 274: 268: 264: 262: 261:Bacteriophage 258: 255: 251: 250: 245: 241: 237: 233: 232: 227: 216: 213: 210: 207: 206: 204: 199: 195: 194: 189: 186: 185: 182: 181: 177: 174: 173: 170: 169: 165: 162: 161: 158: 157: 153: 150: 149: 146: 145: 144:Leviviricetes 141: 138: 137: 134: 133: 132:Lenarviricota 129: 126: 125: 122: 121: 120:Orthornavirae 117: 114: 113: 110: 109: 105: 102: 99: 98: 95: 92: 89: 88: 83: 78: 74: 70: 69: 64: 60: 56: 52: 47: 43: 38: 35: 31: 19: 1054:Fiersviridae 968: 927: 892: 883: 846: 842: 832: 799: 795: 789: 764: 760: 754: 729: 725: 719: 684: 678: 656:(5): 421–6. 653: 649: 642: 605: 601: 591: 566: 558: 521: 517: 467: 463: 453: 436: 414: 411: 404: 389: 350: 333: 325: 285: 278: 247: 230: 229: 225: 224: 192: 191: 179: 168:Fiersviridae 167: 156:Norzivirales 155: 143: 131: 119: 107: 100: 90:(unranked): 66: 33: 993:Wikispecies 427:Experiments 281:nucleotides 254:icosahedral 1043:Categories 984:Q106960755 446:References 417:penicillin 304:stop codon 242:that have 371:chaperone 187:Species: 180:Qubevirus 115:Kingdom: 108:Riboviria 978:Wikidata 957:11459720 943:Q4840022 937:Wikidata 875:29078304 824:54345352 726:Virology 711:29900502 670:16781472 634:20798060 550:21829387 496:27671640 292:proteins 275:Genetics 240:bacteria 163:Family: 127:Phylum: 1026:2846023 866:5676892 816:6871998 781:5288806 746:4108185 625:2936634 541:3150450 487:5068298 175:Genus: 151:Order: 139:Class: 68:E. coli 901:  873:  863:  822:  814:  779:  761:Nature 744:  709:  699:  668:  632:  622:  579:  575:–196. 548:  538:  494:  484:  337:P14647 316:RNases 257:capsid 244:F-pili 1013:8TWBL 952:IRMNG 820:S2CID 392:pilus 346:EF-Ts 342:EF-Tu 296:lysis 101:Realm 94:Virus 63:pilus 1021:NCBI 899:ISBN 871:PMID 812:PMID 796:Cell 777:PMID 742:PMID 707:PMID 697:ISBN 666:PMID 630:PMID 577:ISBN 546:PMID 492:PMID 366:3AGQ 362:3AGP 300:coat 1008:CoL 861:PMC 851:doi 847:114 804:doi 769:doi 765:234 734:doi 689:doi 658:doi 654:101 620:PMC 610:doi 606:107 573:175 536:PMC 526:doi 482:PMC 472:doi 468:113 405:In 358:PDB 348:). 65:of 59:TEM 1045:: 1023:: 1010:: 995:: 980:: 954:: 939:: 869:. 859:. 845:. 841:. 818:. 810:. 800:33 798:. 775:. 763:. 740:. 730:45 728:. 705:. 695:. 664:. 652:. 628:. 618:. 604:. 600:. 544:. 534:. 520:. 516:. 504:^ 490:. 480:. 466:. 462:. 364:, 360:: 318:. 103:: 907:. 877:. 853:: 826:. 806:: 783:. 771:: 748:. 736:: 713:. 691:: 672:. 660:: 636:. 612:: 585:. 552:. 528:: 522:7 498:. 474:: 228:( 20:)

Index

Qubevirus durum


TEM
pilus
E. coli
Virus classification
Edit this classification
Virus
Riboviria
Orthornavirae
Lenarviricota
Leviviricetes
Norzivirales
Fiersviridae
Qubevirus
positive-strand RNA virus
bacteria
F-pili
Escherichia coli
icosahedral
capsid
Bacteriophage

nucleotides
open reading frames
proteins
lysis
coat
stop codon

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