721:
494:
955:(TEA) in water and soil environments. Because of its low solubility, it is difficult to add sufficient oxygen to serve as a TEA in contaminated waters. The use of microbes to help metabolise the pollutant is an effective solution. The metabolism of the nutrients can provide substances that confer useful advantages to other organisms in the environment, which ultimately increases
276:. These draft genomes also revealed that they contained genes confirmed to be involved in cellular processes, such as carbon dioxide fixation and sulfur oxidation. Strain AB26 was discovered to have a unique 100 kb plasmid sequence homologous to plasmid 3 that contain genes related to metal metabolism and transport (e.g.
542:, and other environmental conditions. One study discovered this species of bacteria to be abundant in the sediment surface layer of a freshwater pond while another experiment isolated it from the anaerobic sludge of Hongdao shrimp pond, located in Qingdao, China. Another study isolated
839:
Given that petroleum-derived plastics are expected to persist within the environment when discarded and therefore pose a threat as a widespread pollutant, continuous research is being conducted on the production bioplastic materials as a sustainable alternative. Biopolyesters, such as
645:
are capable of fixing carbon using multiple different pathways (e.g. ferrous iron oxidation, pEEu), researchers have begun conducting studies concerning the extent by which photoferrotrophic freshwater microbes contribute to mitigating fluctuations in marine carbon concentrations via
444:
to yield sulfates in the ecosystem without accumulating intermediates and have an unusual tri-heme cytochrome subunit bound to the reaction center, therefore allowing for photolithoautotrophic growth. Oxidation of thiosulfate is done by the SoxAX protein, which is a heterodimeric
1046:(Marsupenaeus japonicus) is an important species in the global aquaculture industry, most notably being cultured in Japan and China. Probiotics have been used as an eco-friendly, low-cost approach to boost shrimp survival by upregulating immune system genes, such as
844:(PHAs), are sustainable alternatives to petroleum-based plastics as they are biodegradable, biocompatible, and can also be produced biologically. PHAs are a metabolic result of excess carbon. This production is normally costly due to high carbon demands, however
931:(PHB) which is one of the most preferable substrates for hydrogen production in this strain. It can be achieved in high-density suspension under external-substrate-depleted conditions after aerobic cultivation in the presence of an excess amount of
574:
as it utilizes sulfide as the donor for electrons when conducting photolithotrophic metabolic processes. Another factor contributing to the proliferation of this bacterium is organic matter concentrations in water, since it can also undergo
2701:
Carlozzi P, Touloupakis E (May 2021). "Bioplastic production by feeding the marine
Rhodovulum sulfidophilum DSM-1374 with four different carbon sources under batch, fed-batch and semi-continuous growth regimes".
761:
nature of spiders and low silk potential in spider glands, silk yields are low. Genetic approaches to increase silk production yields have been attempted. The required spider genes have been successfully
3340:
570:. is the presence and concentration of sulfide. While other Purple Non-Sulfur Bacteria (PNSB) species are incapable of surviving in sulfur-rich areas, these conditions are ideal for
3166:
de Bont JA, Scholten A, Hansen TA (January 1981). "DNA-DNA hybridization of
Rhodopseudomonas capsulata, Rhodopseudomonas sphaeroides and Rhodopseudomonas sulfidophila strains".
3122:"Investigation of a Farm-scale Multitrophic Recirculating Aquaculture System with the Addition of Rhodovulum sulfidophilum for Milkfish (Chanos chanos) Coastal Aquaculture"
650:. Considering that marine sediments account for about fifty percent of global primary production, it may be worthwhile looking into how photoferrotrophic organisms such as
413:
is metabolically versatile and can adapt to various environmental conditions by using various metabolic pathways under anaerobic conditions. Primary sources of energy for
1766:
Hagemann GE, Katsiou E, Forkl H, Steindorf AC, Tadros MH (April 1997). "Gene cloning and regulation of gene expression of the puc operon from
Rhodovulum sulfidophilum".
268:
with 93 and 84 genes respectively. The first complete genome was published for strain DSM 2351, revealing a circular chromosome and three circular plasmids of differing
2895:"Maximization of hydrogen production ability in high-density suspension ofRhodovulum sulfidophilum cells using intracellular poly(3-hydroxybutyrate) as sole substrate"
3314:
720:
1706:"Taxonomic Re-Evaluation and Genomic Comparison of Novel Extracellular Electron Uptake-Capable Rhodovulum visakhapatnamense and Rhodovulum sulfidophilum Isolates"
2328:
Azad SA, Vikineswary S, Chong VC, Ramachandran KB (January 2004). "Rhodovulum sulfidophilum in the treatment and utilization of sardine processing wastewater".
605:
has been discovered to optimally grow in areas that have a temperature range of 30-35 °C and at a pH of around 7.0. Anaerobic conditions are necessary for
2745:
Carlozzi P, Giovannelli A, Traversi ML, Touloupakis E (2021-02-01). "Poly(3-hydroxybutyrate) bioproduction in a two-step sequential process using wastewater".
449:. Additionally, unlike other nonsulfur purple bacteria, R. sulfidophilum is able to synthesize its peripheral antenna complex under dark aerobic conditions.
472:
DSM 2351 is found to produce and excrete high levels of nucleic acids, which causes cell aggregates to form. Additionally, photoferrotrophic organisms like
2788:
Amstutz V, Hanik N, Pott J, Utsunomia C, Zinn M (2019). "Tailored biosynthesis of polyhydroxyalkanoates in chemostat cultures". In Bruns N, Loos K (eds.).
1394:
Kobayashi M, Kobayashi M (2004). "Waste
Remediation and Treatment Using Anoxygenic Phototrophic Bacteria". In Blankenship RE, Madigan MT, Bauer CE (eds.).
889:. Anoxygenic photosynthetic bacteria have been shown to produce higher amounts of PHA compared to oxygenic phototrophs, such as plants and cyanobacteria.
641:
activities is stored within the ocean, which is the largest existing reservoir of carbon dioxide on earth. Since metabolically flexible microbes such as
272:
size. Additionally, draft genomes of the AB14, AB26 and AB30 strains were published, and when compared showed diversity between the different strains of
923:. This process can also be used in the treatment of waste from agriculture, forestry and food processing. Additionally, the hydrogen production rate of
951:
as it can grow in polluted environments, such as industrial fish processing wastewater. Organic contamination often depletes oxygen and other terminal
2989:
Hwang SD, Midorikawa N, Punnarak P, Kikuchi Y, Kondo H, Hirono I, Aoki T (December 2012). "Inhibition of Hirame rhabdovirus growth by RNA aptamers".
3301:
2143:
Cai J, Wang G (October 2012). "Hydrogen production by a marine photosynthetic bacterium, Rhodovulum sulfidophilum P5, isolated from a shrimp pond".
1491:"Intrageneric Structure of the Genus Rhodobacter: Transfer of Rhodobacter sulfidophilus and Related Marine Species to the Genus Rhodovulum gen. nov"
3327:
707:
strain P122 A, which has been cultured from deep-subseafloor sediments, has two known phages with 36kb genomes and a head/tail of 46/100 mm.
248:
genus have been described with additional properties of G+C content of the DNA that ranges from 66.3 to 66.6 mol% in type strain DSM 1374.
3231:
3241:
3220:
2393:
1411:
550:
in seashore sediment samples from Osaka Bay and tidal water samples from a beach at
Visakhapatnam in coastal areas of Andhra Pradesh, India.
330:. In addition, it was found that there were no Integration Host Factor (IHF) and Fumerate and Nitrate Reductase (FNR) regulation protein
2028:"Photoferrotrophy and phototrophic extracellular electron uptake is common in the marine anoxygenic phototroph Rhodovulum sulfidophilum"
1244:"Extracellular nucleic acids of the marine bacterium Rhodovulum sulfidophilum and recombinant RNA production technology using bacteria"
2805:
2224:"Rhodovulum marinum sp. nov., a novel phototrophic purple non-sulfur alphaproteobacterium from marine tides of Visakhapatnam, India"
3085:
Balcázar JL, de Blas I, Ruiz-Zarzuela I, Cunningham D, Vendrell D, Múzquiz JL (May 2006). "The role of probiotics in aquaculture".
2085:"Characterization of extracellular DNA production and flocculation of the marine photosynthetic bacterium Rhodovulum sulfidophilum"
562:
exhibits a relatively wide distribution and is found in a variety of aquatic habitats, especially anaerobic environments with high
776:). However, these microbial cell factories are unsustainable and costly due to the high metabolic demands for organic materials.
638:
205:
for its applications in producing artificial spider silk and biocompounds, waste remediation and for its use in aquaculture.
2477:
3332:
2266:
Hiraishi, Akira; Nagao, Nobuyoshi; Yonekawa, Chinatsu; Umekage, So; Kikuchi, Yo; Eki, Toshihiko; Hirose, Yuu (2020-01-22).
1145:
Hansen TA, Veldkamp H (1973). "Rhodopseudomonas sulfidophila, nov. spec., a new species of the purple nonsulfur bacteria".
625:
a and sulfur oxidation to perform photosynthesis as an adaptation to anaerobic climates with high sulfide concentrations.
2504:
Engelhardt T, Sahlberg M, Cypionka H, Engelen B (August 2011). "Induction of prophages from deep-subseafloor bacteria".
992:
493:
2268:"Distribution of Phototrophic Purple Nonsulfur Bacteria in Massive Blooms in Coastal and Wastewater Ditch Environments"
882:) and P3HB-co-3 HV (3-hydroxybutyrateco-3-hydroxyvalerate). Additionally, a PHA synthase (PhaC) gene is present in the
1398:. Advances in Photosynthesis and Respiration. Vol. 2. Dordrecht: Kluwer Academic Publishers. pp. 1269–1282.
1584:"Complete Genome Sequence of Rhodovulum sulfidophilum DSM 2351, an Extracellular Nucleic Acid-Producing Bacterium"
862:(PHA) within bacterial cells. This bacterium does so via photo-fermentation which allows it to transform specific
3368:
831:
proves to be a sustainable, cost-effective photosynthetic microbial cell factory for artificial silk production.
2083:
Suzuki, Hiromichi; Daimon, Masahide; Awano, Tomoyuki; Umekage, So; Tanaka, Terumichi; Kikuchi, Yo (2009-08-01).
1093:
reduction and total phosphorus stabilization. This can help reduce the proliferation of cyanobacteria and algae
2180:"Identification and Characteristics of a Purple, Non-Sulfur Bacterium, Rhodobacter sp. EGH-24 from Korea Coast"
1014:
in aquaculture and fisheries. Additionally, this can be applied to recombinant RNA production technology using
376:
1058:
can be effective as a probiotic at a low concentration (10^3 cfu/mL) in rearing waters. After the addition of
1062:
various features of shrimp growth are improved: body weight (by 1.76-fold), survival rate (by 8.3%), and the
453:
can utilize a wide variety of organic compunds, and grows both photoorganotrophically and heterotrophically.
867:
461:
336:
1858:
Kelley BC, Jouanneau Y, Vignais PM (August 1979). "Nitrogenase activity in
Rhodopseudomonas sulfidophila".
3269:
1047:
879:
784:
580:
433:
398:
295:
found that AB26 reserved around 16% of its entire 4,380,746 base pair genome to transport and also had 20
803:
containing the necessary genetic information for the MaSp1 gene, researchers conjugated the plasmid into
546:
from a microbial mat within a brackish estuary in
Massachusetts, USA. Additional studies also discovered
1071:
1063:
871:
859:
841:
191:
126:
3036:
566:
concentrations. The main environmental factor governing the growth of purple bacteria species such as
3175:
2998:
2513:
2422:
2039:
1979:
1867:
1814:
1197:
875:
647:
477:
1909:
Bamford VA, Bruno S, Rasmussen T, Appia-Ayme C, Cheesman MR, Berks BC, Hemmings AM (November 2002).
2026:
Gupta D, Guzman MS, Rengasamy K, Stoica A, Singh R, Ranaivoarisoa TO, et al. (November 2021).
928:
763:
622:
66:
3199:
3067:
2819:
2770:
2727:
2629:
2458:
2353:
2120:
2003:
1891:
1621:
1535:"Whole-Genome Sequence of the Purple Photosynthetic Bacterium Rhodovulum sulfidophilum Strain W4"
1221:
1170:
621:
acid as carbon and energy sources in low oxygen conditions with available light. It can also use
357:
296:
171:
31:
1188:
Imhoff JF, Kramer M, Trüper HG (1983). "Sulfate assimilation in
Rhodopseudomonas sulfidophila".
340:. It was speculated that the lack of binding sites for these proteins are indicative of why the
3319:
2376:
Azbar N, Levin DB (2011). "Biohydrogen production from
Agricultural Agrofood-based resources".
1803:"Horizontal operon transfer, plasmids, and the evolution of photosynthesis in Rhodobacteraceae"
3237:
3216:
3191:
3143:
3102:
3059:
3014:
2971:
2922:
2914:
2875:
2811:
2801:
2762:
2719:
2680:
2621:
2580:
2529:
2450:
2389:
2345:
2307:
2289:
2245:
2201:
2160:
2112:
2104:
2065:
1995:
1948:
1930:
1883:
1840:
1783:
1737:
1683:
1613:
1564:
1512:
1471:
1407:
1373:
1319:
1265:
1213:
1162:
952:
816:
288:
175:
167:
3345:
2893:
Maeda, Isamu; Miyasaka, Hitoshi; Umeda, Fusako; Kawase, Masaya; Yagi, Kiyohito (2003-02-20).
3183:
3133:
3094:
3051:
3006:
2961:
2953:
2906:
2865:
2857:
2793:
2754:
2711:
2670:
2660:
2611:
2570:
2560:
2521:
2440:
2430:
2381:
2337:
2297:
2279:
2235:
2191:
2152:
2096:
2055:
2047:
1987:
1938:
1922:
1875:
1830:
1822:
1775:
1727:
1717:
1673:
1665:
1650:"Draft Genome Sequences of Three Closely Related Isolates of the Purple Nonsulfur Bacterium
1603:
1595:
1554:
1546:
1502:
1461:
1451:
1399:
1363:
1355:
1309:
1299:
1255:
1205:
1154:
920:
768:
576:
300:
183:
179:
90:
3258:
2599:
2547:
Heinrichs ME, Heyerhoff B, Arslan-Gatz BS, Seidel M, Niggemann J, Engelen B (2022-05-27).
1103:
819:, the marine bacteria uses low-cost, abundant and renewable resources to make the silk: CO
678:
674:
592:
524:
155:
78:
2409:
Heinze C, Meyer S, Goris N, Anderson L, Steinfeldt R, Chang N, et al. (2015-06-09).
1344:"A marine photosynthetic microbial cell factory as a platform for spider silk production"
878:
as single carbon sources into the following well known polymers of the PHA family, P3HB (
3179:
3002:
2894:
2649:"Natural Polymeric Materials: A Solution to Plastic Pollution from the Agro-Food Sector"
2517:
2426:
2043:
1983:
1967:
1871:
1818:
1533:
Masuda S, Hori K, Maruyama F, Ren S, Sugimoto S, Yamamoto N, et al. (August 2013).
1201:
242:
species being able to be differentiated phenotypically from the freshwater species. The
2966:
2941:
2870:
2841:
2675:
2648:
2575:
2548:
2385:
2302:
2267:
2060:
2027:
1835:
1802:
1732:
1705:
1678:
1649:
1608:
1583:
1559:
1534:
1466:
1431:
1368:
1343:
1314:
1287:
1098:
1003:
948:
911:
from low cost organic materials in presence of light. This is reaction is catalyzed by
849:
754:
670:
634:
480:
minerals as electron donors through phototrophic extracellular electron uptake (pEEu).
429:
391:
381:
54:
1943:
1910:
1779:
1342:
Foong CP, Higuchi-Takeuchi M, Malay AD, Oktaviani NA, Thagun C, Numata K (July 2020).
3362:
2823:
2774:
2731:
2633:
2525:
2341:
1039:
998:
686:
345:
3203:
3071:
2462:
2357:
2124:
1895:
1625:
1174:
848:
proves to be an effective alternative as it generates its own carbon source through
2156:
2007:
1722:
1456:
1225:
1043:
956:
863:
691:
614:
516:
512:
446:
331:
2410:
2284:
344:
operon is expressed when oxygen is present. It was also discovered that while the
3292:
3098:
389:
shares regions of genetic similarity to a group of other species that range from
2842:"Class I Polyhydroxyalkanoate Synthase from the Purple Photosynthetic Bacterium
2196:
2179:
2178:
Cha MS, Kim KH, Jo SJ, Lee NE, Lee JE, Lee JD, Lee SJ, Park JR (December 2003).
1094:
1031:
1011:
912:
808:
758:
750:
725:
Large-scale artificial production and fiber extrusion of MaSp1-(6-mer) spindrion
618:
610:
539:
441:
368:
is of particular interest for better understanding relevant metabolic pathways.
2797:
2758:
2222:
Srinivas TN, Kumar PA, Sasikala C, Ramana CV, Süling J, Imhoff JF (July 2006).
2051:
1966:
Widdel F, Schnell S, Heising S, Ehrenreich A, Assmus B, Schink B (April 1993).
1111:
is used a probiotic to increase aquaculture efficiency and improve management.
527:
flats of the Dutch
Waddenzee, north of the province of Groningen, Netherlands.
3055:
2715:
2565:
2549:"Deciphering the Virus Signal Within the Marine Dissolved Organic Matter Pool"
2100:
1826:
1359:
1304:
792:
261:
244:
222:
195:
187:
159:
103:
3147:
2918:
2861:
2766:
2625:
2600:"Super Bacteria: A New Hope of Manufacturing Spider Silk in an Efficient Way"
2454:
2293:
2205:
2164:
2108:
1999:
1934:
1887:
1801:
Brinkmann H, Göker M, Koblížek M, Wagner-Döbler I, Petersen J (August 2018).
1669:
1599:
1550:
1516:
1507:
1490:
1403:
1217:
3120:
Chang BV, Liao CS, Chang YT, Chao WL, Yeh SL, Kuo DL, Yang CW (2019-03-28).
2084:
1911:"Structural basis for the oxidation of thiosulfate by a sulfur cycle enzyme"
1260:
1243:
1035:
976:
812:
699:
phage RS1 (GenBank: JF974307.1) that has a tail length of 100 nm and a
591:
is typically found in marine environments with sulfidic conditions, such as
464:, a process that fixes inorganic carbon to organic material using light and
372:
277:
269:
163:
3106:
3063:
3018:
2975:
2926:
2879:
2815:
2723:
2684:
2616:
2584:
2533:
2435:
2349:
2311:
2249:
2116:
2069:
1952:
1926:
1844:
1741:
1687:
1617:
1582:
Nagao N, Hirose Y, Misawa N, Ohtsubo Y, Umekage S, Kikuchi Y (April 2015).
1568:
1475:
1377:
1323:
1269:
991:
can produce RNA antiviral aptamers against fish infecting viruses, such as
654:
could contribute to reducing the amount of excess carbon within the ocean.
3195:
2665:
2240:
2223:
1787:
1166:
511:
has been found in a variety of aquatic environments, including freshwater
3286:
2846:
Predominantly Exists as a Functional Dimer in the Absence of a Substrate"
1078:
1051:
905:
796:
746:
Scanning electron micrographs of the break point of the spider silk fiber
666:
535:
465:
421:
42:
2647:
Acquavia MA, Pascale R, Martelli G, Bondoni M, Bianco G (January 2021).
2604:
International Journal for Research in Applied Sciences and Biotechnology
1648:
Guzman MS, McGinley B, Santiago-Merced N, Gupta D, Bose A (March 2017).
3306:
3187:
3138:
3121:
1879:
1209:
1158:
1090:
984:
980:
972:
932:
800:
596:
563:
265:
3010:
2910:
2445:
216:
was first reported by Hansen and Veldkamp in 1973, and given the name
1991:
886:
700:
425:
327:
281:
3263:
2957:
1101:
and promote the growth of other helpful bacteria, such as
428:
as a carbon source or sulfide as an electron source, it can undergo
417:
consist of light, organic compounds and inorganic sulfur compounds.
1768:
Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression
1430:
Koga A, Goto M, Hayashi S, Yamamoto S, Miyasaka H (January 2022).
927:
be maximized by rapid degradation and use of endogenous substrate
773:
2411:"The ocean carbon sink – impacts, vulnerabilities and challenges"
2228:
International Journal of Systematic and Evolutionary Microbiology
498:
Dutch Waddenzee, North of the province of Groningen, Netherlands:
190:) under dark conditions. It contains the photosynthetic pigments
2840:
Higuchi-Takeuchi M, Motoda Y, Kigawa T, Numata K (August 2017).
807:
and observed gene expression and spider silk fiber formation in
534:
can be located is dependent on growth dependent factors such as
523:
was originally isolated from the mud of the marine floor of the
285:
3267:
799:(MaSp), the major protein in spider silk. After constructing a
1054:-related genes, including cuticle and calcification proteins.
757:
material well-suited for biomedical uses. However, due to the
158:. The cells are rod-shaped, and range in size from 0.6 to 0.9
915:
which is inhibited by oxygen, ammonia and a high N:C ratio. H
360:, a regulatory region exhibited an exchange of TGT to CGT in
1968:"Ferrous iron oxidation by anoxygenic phototrophic bacteria"
1432:"Probiotic Effects of a Marine Purple Non-Sulfur Bacterium,
677:
bacteria in studies regarding the role of viruses in marine
260:
DSM 1374 was published in 2013, and was predicted to have a
3037:"Synthetic antibody: Prospects in aquaculture biosecurity"
2792:. Methods in Enzymology. Vol. 627. pp. 99–123.
742:
Scanning electron micrographs of the spider silk fibers.
609:
growth and to use a variety of organic compounds such as
2835:
2833:
264:
with 3983 genes that code for protein, and two circular
587:
is still capable of growth. Based on these conditions,
3233:
The prokaryotes: a handbook on the biology of bacteria
3213:
The Phototrophic bacteria: anaerobic life in the light
2478:"Using Microorganisms to Fight a Macro-level Problem"
1281:
1279:
1006:
mortality from 90% to 10% in 10 days post-infection.
579:
growth. Therefore in wastewater regions with a large
827:
as a nitrogen source. While more work is necessary,
307:
discovered that the bacterium contained one copy of
3276:
1288:"Recombinant Spider Silk: Promises and Bottlenecks"
823:
as a carbon source, light as an energy source and N
2499:
2497:
1286:Ramezaniaghdam M, Nahdi ND, Reski R (2022-03-08).
226:genus in 1994 by Hiraishi and Ueda, as all marine
1699:
1697:
1070:has been shown to enhance the larval survival of
766:n heterotrophic organisms ranging from bacteria (
530:The particular geographic region or climate were
2696:
2694:
2261:
2259:
2217:
2215:
1761:
1759:
1757:
1755:
1753:
1751:
1495:International Journal of Systematic Bacteriology
1389:
1387:
385:photosynthetic gene clusters, it was shown that
730:Production of MaSp1-(6-mer) using marine broth
599:, tidal areas, and sulfur-rich coastal waters.
303:. Another study that genetically characterized
1643:
1641:
1639:
1637:
1635:
1237:
1235:
943:As an anoxygenic sulfate reducing phototroph,
220:. The bacterium was later reclassified to the
3030:
3028:
2371:
2369:
2367:
2021:
2019:
2017:
1528:
1526:
1292:Frontiers in Bioengineering and Biotechnology
1140:
1138:
1136:
1134:
1132:
1130:
1128:
1126:
1124:
783:as a sustainable and low cost silk producing
779:In 2020, a research team in Japan identified
8:
3215:. Berkeley: University of California Press.
2323:
2321:
1337:
1335:
1333:
2138:
2136:
2134:
1425:
1423:
1002:. These aptamers have been shown to reduce
291:). A later study that analyzed isolates of
3264:
2940:Keefe AD, Pai S, Ellington A (July 2010).
2476:Van Dusen H (November 2022). Kim C (ed.).
1010:'s aptamers have the potential to improve
919:is an emerging, but controversial form of
20:
3137:
2965:
2869:
2674:
2664:
2615:
2574:
2564:
2444:
2434:
2301:
2283:
2239:
2195:
2059:
1942:
1921:(21). Oxford University Press: 5599–610.
1834:
1731:
1721:
1677:
1607:
1558:
1506:
1465:
1455:
1367:
1313:
1303:
1259:
2145:International Journal of Hydrogen Energy
719:
492:
162:wide and 0.9 to 2.0 μm long, and have a
1120:
795:repetitive sequence of major ampullate
2089:Applied Microbiology and Biotechnology
1242:Kikuchi Y, Umekage S (February 2018).
460:have also been shown to be capable of
420:When provided with a light source and
234:species were transferred to the genus
2184:Journal of the Environmental Sciences
1026:Purple non-sulphur bacteria, such as
734:Lyophilization of pure MaSp1-(6-mer)
166:. These cells reproduce asexually by
7:
2747:Journal of Water Process Engineering
334:in this bacterial species like with
2598:Talukdar C, Sastri S (2021-03-31).
1489:Hiraishi A, Ueda Y (January 1994).
993:hemorrhagic septicemia virus (VHSV)
835:Production of biodegradable plastic
440:is capable of oxidizing sulfide or
2506:Environmental Microbiology Reports
2386:10.1016/b978-0-444-64046-8.00381-5
1704:Davenport EJ, Bose A (June 2022).
1396:Anoxygenic Photosynthetic Bacteria
900:As a photoheterotrophic bacteria,
558:Due to its metabolic flexibility,
500:Original location of isolation of
14:
815:growth conditions. Notably, as a
2899:Biotechnology and Bioengineering
2526:10.1111/j.1758-2229.2010.00232.x
2342:10.1046/j.1472-765x.2003.01435.x
1085:Use of the beneficial bacteria,
3044:Fish & Shellfish Immunology
2330:Letters in Applied Microbiology
629:Possible role in climate change
504:by Hansen and Veldkamp in 1973.
2946:Nature Reviews. Drug Discovery
2482:Princeton Public Health Review
2157:10.1016/j.ijhydene.2012.07.130
1723:10.3390/microorganisms10061235
1457:10.3390/microorganisms10020244
979:to detect diseases and act as
858:has the ability to synthesize
476:are capable of using specific
1:
3346:rhodopseudomonas-sulfidophila
3278:Rhodopseudomonas sulfidophila
3035:Chong C, Low C (March 2019).
2285:10.3390/microorganisms8020150
1780:10.1016/s0167-4781(96)00228-x
218:Rhodopseudomonas sulfidophila
3230:Falkow S, Dworkin M (2006).
3099:10.1016/j.vetmic.2006.01.009
681:cycles. Viruses that infect
182:) when light is present, or
2378:Comprehensive Biotechnology
2197:10.5322/jes.2003.12.12.1293
1042:that have health benefits.
3385:
2942:"Aptamers as therapeutics"
2798:10.1016/bs.mie.2019.08.018
2759:10.1016/j.jwpe.2020.101700
2052:10.1038/s41396-021-01015-8
1436:KKMI01, on Kuruma Shrimp (
904:can anaerobically produce
607:Rhodovulum sulfidophilum's
170:. This bacterium can grow
3056:10.1016/j.fsi.2018.11.060
2790:Enzymatic Polymerizations
2716:10.1016/j.nbt.2020.12.002
2566:10.3389/fmicb.2022.863686
2553:Frontiers in Microbiology
2101:10.1007/s00253-009-2031-7
1827:10.1038/s41396-018-0150-9
1360:10.1038/s42003-020-1099-6
1305:10.3389/fbioe.2022.835637
1248:FEMS Microbiology Letters
1066:(by 10%). Additionally,
716:Production of spider silk
323:- genes) each within the
156:purple nonsulfur bacteria
132:
125:
32:Scientific classification
30:
23:
3168:Archives of Microbiology
2991:Journal of Fish Diseases
2862:10.1021/acsomega.7b00667
2844:Rhodovulum sulfidophilum
1860:Archives of Microbiology
1670:10.1128/genomeA.00029-17
1652:Rhodovulum sulfidophilum
1600:10.1128/genomeA.00388-15
1551:10.1128/genomeA.00577-13
1508:10.1099/00207713-44-1-15
1434:Rhodovulum sulfidophilum
1404:10.1007/0-306-47954-0_62
1190:Archives of Microbiology
1147:Archiv für Mikrobiologie
1056:Rhodovulum sulfidophilum
1008:Rhodovulum sulfidophilum
856:Rhodovulum sulfidophilum
705:Rhodovulum sulfidophilum
703:diameter of 46 nm.
683:Rhodovulum sulfidophilum
669:. It has been used as a
663:Rhodovulum sulfidophilum
643:Rhodovulum sulfidophilum
585:Rhodovulum sulfidophilum
568:Rhodovulum sulfidophilum
560:Rhodovulum sulfidophilum
544:Rhodovulum sulfidophilum
532:Rhodovulum sulfidophilum
521:Rhodovulum sulfidophilum
509:Rhodovulum sulfidophilum
470:Rhodovulum sulfidophilum
451:Rhodovulum sulfidophilum
438:Rhodovulum sulfidophilum
411:Rhodovulum sulfidophilum
377:horizontal gene transfer
214:Rhodovulum sulfidophilum
151:Rhodovulum sulfidophilum
136:Rhodovulum sulfidophilum
25:Rhodovulum sulfidophilum
3087:Veterinary Microbiology
1077:and the performance of
989:Rodovulum sulfidophilum
929:poly(3-hydroxybutyrate)
787:. Genetically modified
468:as the electron donor.
399:Dineoroseobacter shibae
364:Studying the genome of
337:Rhodobacter sphaeroides
142:Hiraishi and Ueda, 1994
2617:10.31033/ijrasb.8.2.28
2436:10.5194/esd-6-327-2015
1438:Marsupenaeus japonicus
1348:Communications Biology
1048:antimicrobial peptides
880:poly-3-hydroxybutyrate
785:microbial cell factory
747:
581:chemical oxygen demand
505:
2666:10.3390/polym13010158
2415:Earth System Dynamics
2241:10.1099/ijs.0.64005-0
1261:10.1093/femsle/fnx268
1074:Oxyeleotris marmorat)
1064:feed conversion ratio
842:polyhydroxyalkanoates
723:
496:
201:There is interest in
192:bacteriochlorophyll a
118:R. sulfidophilum
3236:. Berlin: Springer.
1927:10.1093/emboj/cdf566
1658:Genome Announcements
1588:Genome Announcements
1539:Genome Announcements
1030:, have been used in
968:Antiviral properties
939:Waste bioremediation
860:polyhydroxyalkanoate
648:carbon sequestration
456:Multiple strains of
16:Species of bacterium
3211:Ormerod JG (1983).
3180:1981ArMic.128..271D
3003:2012JFDis..35..927H
2518:2011EnvMR...3..459E
2427:2015ESD.....6..327H
2234:(Pt 7): 1651–1656.
2151:(20): 15070–15080.
2044:2021ISMEJ..15.3384G
1984:1993Natur.362..834W
1872:1979ArMic.122..145K
1819:2018ISMEJ..12.1994B
1202:1983ArMic.136...96I
623:bacteriochlorophyll
484:Habitat and ecology
297:response regulators
256:A genome draft for
154:is a gram-negative
67:Alphaproteobacteria
3188:10.1007/BF00422528
3139:10.3390/su11071880
1880:10.1007/bf00411353
1210:10.1007/BF00404780
1159:10.1007/BF00409510
963:Use in aquaculture
953:electron acceptors
748:
595:, seawater pools,
577:photoorganotrophic
506:
348:sequences between
289:transport proteins
188:chemoheterotrophic
180:photoheterotrophic
3356:
3355:
3270:Taxon identifiers
3243:978-0-387-25495-1
3222:978-0-520-05092-1
3011:10.1111/jfd.12000
2911:10.1002/bit.10494
2704:New Biotechnology
2395:978-0-444-64047-5
2190:(12): 1293–1301.
2038:(11): 3384–3398.
1978:(6423): 834–836.
1664:(11): e00029–17.
1413:978-0-7923-3681-5
1004:Japanese flounder
447:c-type cytochrome
362:R. sulfidophilum.
301:histidine kinases
147:
146:
3376:
3369:Hyphomicrobiales
3349:
3348:
3336:
3335:
3323:
3322:
3310:
3309:
3297:
3296:
3295:
3265:
3259:Rhodopseudomonas
3247:
3226:
3207:
3152:
3151:
3141:
3117:
3111:
3110:
3093:(3–4): 173–186.
3082:
3076:
3075:
3041:
3032:
3023:
3022:
2986:
2980:
2979:
2969:
2937:
2931:
2930:
2890:
2884:
2883:
2873:
2856:(8): 5071–5078.
2837:
2828:
2827:
2785:
2779:
2778:
2742:
2736:
2735:
2698:
2689:
2688:
2678:
2668:
2644:
2638:
2637:
2619:
2595:
2589:
2588:
2578:
2568:
2544:
2538:
2537:
2501:
2492:
2491:
2489:
2488:
2473:
2467:
2466:
2448:
2438:
2406:
2400:
2399:
2373:
2362:
2361:
2325:
2316:
2315:
2305:
2287:
2263:
2254:
2253:
2243:
2219:
2210:
2209:
2199:
2175:
2169:
2168:
2140:
2129:
2128:
2080:
2074:
2073:
2063:
2032:The ISME Journal
2023:
2012:
2011:
1992:10.1038/362834a0
1963:
1957:
1956:
1946:
1915:The EMBO Journal
1906:
1900:
1899:
1855:
1849:
1848:
1838:
1813:(8): 1994–2010.
1807:The ISME Journal
1798:
1792:
1791:
1763:
1746:
1745:
1735:
1725:
1701:
1692:
1691:
1681:
1645:
1630:
1629:
1611:
1594:(2): e00388-15.
1579:
1573:
1572:
1562:
1545:(4): e00577-13.
1530:
1521:
1520:
1510:
1486:
1480:
1479:
1469:
1459:
1427:
1418:
1417:
1391:
1382:
1381:
1371:
1339:
1328:
1327:
1317:
1307:
1283:
1274:
1273:
1263:
1239:
1230:
1229:
1185:
1179:
1178:
1142:
1109:R. sulfidophilum
1087:R. sulfidophilum
1068:R. sulfidophilum
1060:R. sulfidophilum
1028:R. sulfidophilum
1016:R. sulfidophilum
945:R. sulfidophilum
925:R. sulfidophilum
921:renewable energy
902:R. sulfidophilum
884:R. sulfidophilum
846:R. sulfidophilum
829:R. sulfidophilum
805:R. sulfidophilum
791:can produce the
789:R. sulfidophilum
781:R. sulfidophilum
738:Fiber extrusion
695:family, such as
652:R. sulfidophilum
603:R. sulfidophilum
593:marine sediments
589:R. sulfidophilum
548:R. sulfidophilum
474:R. sulfidophilum
462:photoferrotrophy
458:R. sulfidophilum
415:R. sulfidophilum
387:R. sulfidophilum
366:R. sulfidophilum
354:R. sulfidophilum
305:R. sulfidophilum
293:R. sulfidophilum
274:R. sulfidophilum
258:R. sulfidophilum
232:Rhodopseudomonas
203:R. sulfidophilum
176:photoautotrophic
138:
91:Rhodobacteraceae
21:
3384:
3383:
3379:
3378:
3377:
3375:
3374:
3373:
3359:
3358:
3357:
3352:
3344:
3339:
3331:
3326:
3318:
3313:
3305:
3300:
3291:
3290:
3285:
3272:
3255:
3250:
3244:
3229:
3223:
3210:
3165:
3161:
3159:Further reading
3156:
3155:
3119:
3118:
3114:
3084:
3083:
3079:
3039:
3034:
3033:
3026:
2997:(12): 927–934.
2988:
2987:
2983:
2958:10.1038/nrd3141
2939:
2938:
2934:
2892:
2891:
2887:
2839:
2838:
2831:
2808:
2787:
2786:
2782:
2744:
2743:
2739:
2700:
2699:
2692:
2646:
2645:
2641:
2597:
2596:
2592:
2546:
2545:
2541:
2503:
2502:
2495:
2486:
2484:
2475:
2474:
2470:
2408:
2407:
2403:
2396:
2375:
2374:
2365:
2327:
2326:
2319:
2265:
2264:
2257:
2221:
2220:
2213:
2177:
2176:
2172:
2142:
2141:
2132:
2082:
2081:
2077:
2025:
2024:
2015:
1965:
1964:
1960:
1908:
1907:
1903:
1857:
1856:
1852:
1800:
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1795:
1765:
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1749:
1703:
1702:
1695:
1647:
1646:
1633:
1581:
1580:
1576:
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1524:
1488:
1487:
1483:
1429:
1428:
1421:
1414:
1393:
1392:
1385:
1341:
1340:
1331:
1285:
1284:
1277:
1241:
1240:
1233:
1187:
1186:
1182:
1144:
1143:
1122:
1117:
1024:
970:
965:
941:
918:
909:
898:
896:
893:Production of H
837:
826:
822:
718:
713:
689:members of the
660:
658:Viral infection
631:
572:R.sulfidophilum
556:
502:R.sulfidophilum
491:
486:
424:, using either
408:
371:When analysing
254:
211:
143:
140:
134:
121:
107:
93:
81:
79:Rhodobacterales
69:
57:
45:
17:
12:
11:
5:
3382:
3380:
3372:
3371:
3361:
3360:
3354:
3353:
3351:
3350:
3337:
3324:
3311:
3298:
3282:
3280:
3274:
3273:
3268:
3262:
3261:
3254:
3253:External links
3251:
3249:
3248:
3242:
3227:
3221:
3208:
3174:(3): 271–274.
3162:
3160:
3157:
3154:
3153:
3126:Sustainability
3112:
3077:
3024:
2981:
2952:(7): 537–550.
2932:
2905:(4): 474–481.
2885:
2829:
2806:
2780:
2737:
2690:
2639:
2610:(2): 225–226.
2590:
2539:
2512:(4): 459–465.
2493:
2468:
2421:(1): 327–358.
2401:
2394:
2363:
2317:
2272:Microorganisms
2255:
2211:
2170:
2130:
2095:(2): 349–356.
2075:
2013:
1958:
1901:
1866:(2): 145–152.
1850:
1793:
1774:(3): 341–358.
1747:
1710:Microorganisms
1693:
1631:
1574:
1522:
1481:
1444:Microorganisms
1419:
1412:
1383:
1329:
1275:
1231:
1180:
1119:
1118:
1116:
1113:
1107:. Ultimately,
1099:eutrophication
1040:microorganisms
1023:
1020:
969:
966:
964:
961:
949:bioremediation
940:
937:
916:
907:
897:
894:
891:
866:(OAs) such as
850:photosynthesis
836:
833:
824:
820:
817:photoautotroph
772:) to animals (
717:
714:
712:
709:
679:biogeochemical
671:model organism
659:
656:
635:greenhouse gas
630:
627:
555:
552:
490:
487:
485:
482:
430:photosynthesis
407:
404:
392:Roseibacterium
382:Proteobacteria
350:R. sphaeroides
253:
250:
238:due to marine
210:
207:
168:binary fission
164:polar flagella
145:
144:
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63:
59:
58:
55:Pseudomonadota
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1238:
1236:
1232:
1227:
1223:
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1133:
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1129:
1127:
1125:
1121:
1114:
1112:
1110:
1106:
1105:
1104:Acidobacteria
1100:
1096:
1092:
1088:
1084:
1082:
1076:
1075:
1072:marble goby (
1069:
1065:
1061:
1057:
1053:
1049:
1045:
1044:Kuruma shrimp
1041:
1037:
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1021:
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1013:
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1005:
1001:
1000:
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869:
865:
864:organic acids
861:
857:
853:
851:
847:
843:
834:
832:
830:
818:
814:
810:
809:heterotrophic
806:
802:
798:
794:
790:
786:
782:
777:
775:
771:
770:
765:
760:
759:cannibalistic
756:
755:biodegradable
752:
745:
741:
737:
733:
729:
726:
722:
715:
710:
708:
706:
702:
698:
694:
693:
688:
687:bacteriophage
684:
680:
676:
672:
668:
664:
657:
655:
653:
649:
644:
640:
639:anthropogenic
636:
628:
626:
624:
620:
616:
612:
608:
604:
600:
598:
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439:
435:
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384:
383:
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374:
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343:
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332:binding sites
329:
326:
322:
318:
314:
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302:
298:
294:
290:
287:
283:
279:
275:
271:
270:DNA base-pair
267:
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241:
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233:
229:
225:
224:
219:
215:
208:
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197:
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189:
185:
181:
177:
173:
172:anaerobically
169:
165:
161:
157:
153:
152:
139:
137:
131:
128:
127:Binomial name
124:
120:
119:
114:
111:
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97:
96:
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80:
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2603:
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2542:
2509:
2505:
2485:. Retrieved
2481:
2471:
2418:
2414:
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2377:
2336:(1): 13–18.
2333:
2329:
2275:
2271:
2231:
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2187:
2183:
2173:
2148:
2144:
2092:
2088:
2078:
2035:
2031:
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1971:
1961:
1918:
1914:
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1863:
1859:
1853:
1810:
1806:
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1767:
1713:
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1591:
1587:
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1501:(1): 15–23.
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1433:
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1351:
1347:
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1193:
1189:
1183:
1153:(1): 45–58.
1150:
1146:
1108:
1102:
1086:
1081:Chanos chano
1080:
1073:
1067:
1059:
1055:
1038:, which are
1027:
1025:
1015:
1007:
996:
988:
981:therapeutics
975:are used as
971:
957:productivity
947:is used for
944:
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855:
854:
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838:
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753:is a strong
749:
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739:
735:
731:
727:
724:
711:Applications
704:
696:
692:Siphoviridae
690:
682:
662:
661:
651:
642:
637:produced by
633:Much of the
632:
606:
602:
601:
588:
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571:
567:
559:
557:
554:Distribution
547:
543:
531:
529:
520:
508:
507:
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469:
457:
455:
450:
437:
419:
414:
410:
409:
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390:
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365:
361:
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349:
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335:
324:
320:
316:
312:
308:
304:
292:
273:
257:
255:
243:
239:
235:
231:
227:
221:
217:
213:
212:
202:
200:
150:
149:
148:
135:
133:
117:
116:
102:
24:
18:
3132:(7): 1880.
3050:: 361–367.
2380:: 532–544.
1716:(6): 1235.
1032:aquaculture
1012:biosecurity
999:rhabdovirus
913:nitrogenase
813:autotrophic
793:hydrophobic
751:Spider silk
665:contains a
540:temperature
442:thiosulfate
432:to produce
240:Rhodobacter
228:Rhodobacter
196:carotenoids
184:aerobically
2753:: 101700.
2659:(1): 158.
2559:: 863686.
2487:2023-04-05
2446:1956/12384
2278:(2): 150.
1450:(2): 244.
1354:(1): 357.
1298:: 835637.
1115:References
1089:, confers
1079:milkfish (
1036:probiotics
1022:Probiotics
977:biosensors
697:Rhodovulum
525:intertidal
519:habitats.
478:conductive
406:Metabolism
358:homologous
262:chromosome
245:Rhodovulum
236:Rhodovulum
223:Rhodovulum
104:Rhodovulum
3293:Q16989206
3148:2071-1050
2919:0006-3592
2850:ACS Omega
2824:204813406
2775:226354079
2767:2214-7144
2732:229317407
2710:: 10–17.
2634:234840836
2626:2349-8889
2455:2190-4987
2294:2076-2607
2206:1225-4517
2165:0360-3199
2109:1432-0614
2000:0028-0836
1935:678225926
1888:0302-8933
1517:0020-7713
1218:0302-8933
985:fisheries
868:succinate
675:lysogenic
597:mud flats
394:elongatum
373:evolution
299:, and 22
278:manganese
112:Species:
3363:Category
3320:10034739
3287:Wikidata
3204:19309759
3107:16490324
3072:56479766
3064:30502461
3019:22943666
2976:20592747
2927:12491532
2880:30023736
2816:31630749
2724:33333263
2685:33406618
2653:Polymers
2585:35694303
2534:23761308
2463:17455839
2358:29239661
2350:14687209
2312:31979033
2250:16825644
2125:13006036
2117:19452150
2070:34054125
1953:12411478
1896:32515373
1845:29795276
1742:35744753
1688:28302776
1626:36467883
1618:25931606
1569:23929476
1476:35208699
1378:32641733
1324:35350182
1270:29228187
1175:25160261
1052:moulting
973:Aptamers
797:spidroin
685:include
667:prophage
536:salinity
422:nitrogen
266:plasmids
209:Taxonomy
86:Family:
50:Phylum:
43:Bacteria
38:Domain:
3307:3221188
3196:6971081
3176:Bibcode
2999:Bibcode
2967:7097324
2871:6044645
2676:7796273
2576:9184803
2514:Bibcode
2423:Bibcode
2303:7074854
2061:8528915
2040:Bibcode
2008:4261907
1980:Bibcode
1868:Bibcode
1836:6052148
1815:Bibcode
1788:9130598
1733:9230146
1679:5356053
1609:4417702
1560:3738892
1467:8876596
1369:7343832
1315:8957953
1226:9491589
1198:Bibcode
1167:4725822
1091:ammonia
997:hirame
933:acetate
872:lactate
801:plasmid
615:butyric
564:sulfide
517:benthic
513:pelagic
489:Habitat
194:and of
98:Genus:
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887:genome
876:malate
874:, and
769:E.coli
701:capsid
619:acetic
617:, and
611:lactic
466:Fe(II)
426:malate
328:operon
319:- and
282:nickel
252:Genome
3315:IRMNG
3200:S2CID
3068:S2CID
3040:(PDF)
2820:S2CID
2771:S2CID
2728:S2CID
2630:S2CID
2459:S2CID
2354:S2CID
2121:S2CID
2004:S2CID
1892:S2CID
1622:S2CID
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1171:S2CID
356:were
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1163:PMID
1097:and
995:and
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774:mice
673:for
515:and
375:and
352:and
346:mRNA
313:pucB
311:and
309:pucA
286:zinc
284:and
230:and
3184:doi
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3134:doi
3095:doi
3091:114
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3007:doi
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2755:doi
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