Knowledge (XXG)

Supergroup (biology)

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Tikhonenkov, Denis V.; Mikhailov, Kirill V.; Gawryluk, Ryan M. R.; Belyaev, Artem O.; Mathur, Varsha; Karpov, Sergey A.; Zagumyonnyi, Dmitry G.; Borodina, Anastasia S.; Prokina, Kristina I.; Mylnikov, Alexander P.; Aleoshin, Vladimir V.; Keeling, Patrick J. (2022). "Microbial predators form a new
869: 62:(abbreviated as eToL) has been divided into 5–8 major groupings called 'supergroups'. These groupings were established after the idea that only 929:
studies of bacteria, in a smaller sense than within eukaryotes. As of 2021, it is very commonly used for naming clades within the genus
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Baldo L, Werren JH (2007). "Revisiting Wolbachia Supergroup Typing Based on WSP: Spurious Lineages and Discordance with MLST".
168:). It is estimated to occupy up to half of all eukaryotic diversity, since it includes multiple major groups such as 1133:
Brown MW, et al. (2018), "Phylogenomics Places Orphan Protistan Lineages in a Novel Eukaryotic Super-Group",
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analyses have brought a new, more accurate supergroup model. These are the current supergroups of eukaryotes:
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Many orphan groups of free-living protozoa remain left behind, unable to be added to a supergroup, such as:
1055:"New Phylogenomic Analysis of the Enigmatic Phylum Telonemia Further Resolves the Eukaryote Tree of Life" 1239:
Covacin C, Barker SC (2007). "Supergroup F Wolbachia bacteria parasitise lice (Insecta: Phthiraptera)".
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characteristics that unite their members, which makes the 'supergroup' label more arbitrary.
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and have important defining characteristics. It is an informal, mostly arbitrary rank in
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A possible modern topology of the eToL would be the following (supergroups labeled in
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Phylogenomic tree of eukaryotes, as regarded in 2020. Supergroups are in color.
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Strassert JFH, Jamy M, Mylnikov AP, Tikhonenkov DV, Burki F (April 2019).
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groups should be accepted as ranks, as an alternative to the use of
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Currently, the addition of many lineages of newly discovered
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Burki F, Roger AJ, Brown MW, Simpson AGB (January 2020).
404:, previously an orphan clade but recently brought into 200:
parasites. It essentially contains the majority of "
1002:Simpson, Alastair G.B.; Roger, Andrew J. (2004). 46:, although some supergroups are also treated as 338:, composed by the free-living protozoan groups 1198:Konecka, Edyta; Olszanowski, Ziemowit (2021). 320:and related protists). They're related to the 264:), constituted by the lineages that acquired 8: 380:. It is the biggest remaining clade of the " 1215: 1156: 1146: 1096: 1094: 1092: 1080: 1070: 1021: 978: 956: 954: 952: 950: 948: 944: 27:, is a large group of organisms that 16:Classification rank for living beings 7: 1004:"The real 'kingdoms' of eukaryotes" 824: 802: 780: 639: 517: 510: 503: 496: 486: 479: 472: 462: 58:Since the decade of the 2000s, the 14: 1204:Infection, Genetics and Evolution 925:The term 'supergroup' is used in 868: 863: 858: 836: 754: 723: 683: 678: 673: 651: 561: 539: 534: 529: 1059:Molecular Biology and Evolution 328:, and together form the clade 1: 1217:10.1016/j.meegid.2021.104829 1135:Genome Biology and Evolution 963:"The New Tree of Eukaryotes" 1102:supergroup of eukaryotes". 38:that is often greater than 1289: 1112:10.1038/s41586-022-05511-5 980:10.1016/j.tree.2019.08.008 436:(thought to be related to 390:, previously part of the " 1253:10.1007/s00436-006-0309-6 1185:10.1007/s00284-007-0055-8 1023:10.1016/j.cub.2004.08.038 851: 829: 822: 807: 800: 785: 778: 747: 716: 666: 644: 637: 611: 585: 554: 522: 515: 508: 501: 494: 484: 477: 470: 432:with limited certainty), 29:share one common ancestor 921:Prokaryotic supergroups 394:", entirely containing 60:eukaryotic tree of life 114: 54:Eukaryotic supergroups 1072:10.1093/molbev/msz012 428:(possibly belongs to 270:primary endosymbiosis 112: 137:...) and the use of 25:evolutionary biology 260:(also treated as a 232:(also treated as a 210:(also treated as a 102:or lacked defining 1148:10.1093/gbe/evy014 304:, composed by the 248:and the enigmatic 240:", comprising the 236:), previously in " 218:", comprising the 214:), previously in " 115: 1016:(17): R693–R696. 917: 916: 908: 907: 899: 898: 890: 889: 881: 880: 767: 766: 736: 735: 705: 704: 696: 695: 626: 625: 600: 599: 574: 573: 358:, constituted by 148:, constituted by 1280: 1257: 1256: 1236: 1230: 1229: 1219: 1195: 1189: 1188: 1168: 1162: 1161: 1160: 1150: 1130: 1124: 1123: 1098: 1087: 1086: 1084: 1074: 1050: 1044: 1043: 1025: 999: 993: 992: 982: 967:Trends Ecol Evol 958: 872: 867: 862: 840: 825: 803: 781: 758: 727: 687: 682: 677: 655: 640: 615:Hemimastigophora 565: 543: 538: 533: 518: 511: 504: 497: 487: 480: 473: 463: 402:Hemimastigophora 340:Collodictyonidae 131:Hemimastigophora 1288: 1287: 1283: 1282: 1281: 1279: 1278: 1277: 1263: 1262: 1261: 1260: 1238: 1237: 1233: 1197: 1196: 1192: 1170: 1169: 1165: 1132: 1131: 1127: 1100: 1099: 1090: 1052: 1051: 1047: 1009:Current Biology 1001: 1000: 996: 960: 959: 946: 941: 923: 918: 909: 900: 891: 882: 768: 737: 706: 697: 627: 601: 575: 174:dinoflagellates 56: 17: 12: 11: 5: 1286: 1284: 1276: 1275: 1273:Eukaryote taxa 1265: 1264: 1259: 1258: 1231: 1190: 1173:Curr Microbiol 1163: 1141:(2): 427–433, 1125: 1088: 1065:(4): 757–765. 1045: 994: 943: 942: 940: 937: 922: 919: 915: 914: 911: 910: 906: 905: 902: 901: 897: 896: 893: 892: 888: 887: 884: 883: 879: 878: 875: 874: 850: 847: 846: 843: 842: 828: 823: 821: 818: 817: 814: 813: 810:Malawimonadida 806: 801: 799: 796: 795: 792: 791: 788:Ancyromonadida 784: 779: 777: 774: 773: 770: 769: 765: 764: 761: 760: 746: 743: 742: 739: 738: 734: 733: 730: 729: 715: 712: 711: 708: 707: 703: 702: 699: 698: 694: 693: 690: 689: 670:Archaeplastida 665: 662: 661: 658: 657: 643: 638: 636: 633: 632: 629: 628: 624: 623: 620: 619: 610: 607: 606: 603: 602: 598: 597: 594: 593: 584: 581: 580: 577: 576: 572: 571: 568: 567: 553: 550: 549: 546: 545: 521: 516: 514: 509: 507: 502: 500: 495: 493: 491:Diaphoretickes 485: 483: 478: 476: 471: 469: 461: 442:Ancyromonadida 434:Malawimonadida 430:Archaeplastida 422: 421: 409: 406:Diaphoretickes 399: 385: 353: 333: 299: 274:Chloroplastida 258:Archaeplastida 255: 246:katablepharids 238:Chromalveolata 227: 216:Chromalveolata 205: 202:Chromalveolata 186:foraminiferans 92:Chromalveolata 88:Archaeplastida 55: 52: 15: 13: 10: 9: 6: 4: 3: 2: 1285: 1274: 1271: 1270: 1268: 1254: 1250: 1246: 1242: 1241:Parasitol Res 1235: 1232: 1227: 1223: 1218: 1213: 1209: 1205: 1201: 1194: 1191: 1186: 1182: 1178: 1174: 1167: 1164: 1159: 1154: 1149: 1144: 1140: 1136: 1129: 1126: 1121: 1117: 1113: 1109: 1105: 1097: 1095: 1093: 1089: 1083: 1078: 1073: 1068: 1064: 1060: 1056: 1049: 1046: 1041: 1037: 1033: 1029: 1024: 1019: 1015: 1011: 1010: 1005: 998: 995: 990: 986: 981: 976: 972: 968: 964: 957: 955: 953: 951: 949: 945: 938: 936: 934: 933: 928: 920: 913: 912: 904: 903: 895: 894: 886: 885: 877: 876: 873: 871: 866: 861: 857: 856: 849: 848: 845: 844: 841: 839: 835: 834: 827: 826: 820: 819: 816: 815: 812: 811: 805: 804: 798: 797: 794: 793: 790: 789: 783: 782: 776: 775: 772: 771: 763: 762: 759: 757: 753: 752: 745: 744: 741: 740: 732: 731: 728: 726: 722: 721: 714: 713: 710: 709: 701: 700: 692: 691: 688: 686: 681: 676: 672: 671: 664: 663: 660: 659: 656: 654: 650: 649: 642: 641: 635: 634: 631: 630: 622: 621: 618: 617: 616: 609: 608: 605: 604: 596: 595: 592: 591: 590: 583: 582: 579: 578: 570: 569: 566: 564: 560: 559: 552: 551: 548: 547: 544: 542: 537: 532: 528: 527: 520: 519: 513: 512: 506: 505: 499: 498: 492: 489: 488: 482: 481: 475: 474: 468: 465: 464: 460: 458: 453: 451: 450:Apusomonadida 447: 443: 439: 435: 431: 427: 419: 418: 413: 410: 407: 403: 400: 397: 393: 389: 386: 383: 379: 378: 373: 369: 368:Heterolobosea 365: 361: 360:Discicristata 357: 354: 351: 350: 345: 341: 337: 334: 331: 327: 323: 319: 315: 311: 307: 303: 300: 297: 296: 291: 287: 283: 279: 275: 271: 267: 263: 259: 256: 253: 252: 247: 243: 239: 235: 231: 228: 225: 221: 217: 213: 209: 206: 203: 199: 195: 191: 187: 183: 179: 175: 171: 167: 163: 159: 158:Stramenopiles 155: 151: 147: 144: 143: 142: 140: 136: 132: 128: 124: 120: 111: 107: 105: 104:morphological 101: 97: 93: 89: 85: 81: 77: 73: 69: 65: 61: 53: 51: 49: 45: 41: 37: 34: 30: 26: 22: 1244: 1240: 1234: 1207: 1203: 1193: 1176: 1172: 1166: 1138: 1134: 1128: 1103: 1062: 1058: 1048: 1013: 1007: 997: 973:(1): 43–55. 970: 966: 930: 927:phylogenetic 924: 853: 852: 831: 830: 808: 786: 749: 748: 718: 717: 668: 667: 646: 645: 613: 612: 587: 586: 556: 555: 524: 523: 456: 454: 423: 415: 377:Tsukubamonas 375: 347: 310:Opisthokonta 293: 266:chloroplasts 251:Palpitomonas 249: 242:cryptomonads 224:centrohelids 194:apicomplexan 190:radiolarians 139:phylogenomic 116: 100:paraphyletic 80:Opisthokonta 68:paraphyletic 64:monophyletic 57: 20: 18: 1247:: 479–485. 417:Ancoracysta 326:apusomonads 290:Glaucophyta 282:land plants 278:green algae 1210:(104829). 939:References 751:Metamonada 438:Metamonada 388:Metamonada 364:Euglenozoa 349:Mantamonas 344:Rigifilida 295:Rhodelphis 286:Rhodophyta 222:algae and 220:haptophyte 192:, and the 135:Rigifilida 33:biological 21:supergroup 1226:1567-1348 1179:: 81–87. 1040:207051421 932:Wolbachia 648:Cryptista 467:Eukaryota 446:Breviatea 398:protists. 396:anaerobic 392:Excavates 382:Excavates 322:breviates 306:Amoebozoa 230:Cryptista 162:Alveolata 154:SAR clade 150:Telonemia 123:Telonemia 121:(such as 76:Amoebozoa 1267:Category 1120:36477531 1032:15341755 989:31606140 855:Amorphea 558:Haptista 372:Jakobida 324:and the 308:and the 302:Amorphea 268:through 208:Haptista 198:oomycete 182:ciliates 178:seaweeds 166:Rhizaria 152:and the 119:protists 96:Rhizaria 84:Excavata 72:Protista 70:kingdom 36:taxonomy 1158:5793813 1082:6844682 720:Discoba 589:Provora 452:, etc. 426:Picozoa 412:Provora 356:Discoba 314:animals 262:kingdom 170:diatoms 127:Picozoa 44:kingdom 1224:  1155:  1118:  1104:Nature 1079:  1038:  1030:  987:  330:Obazoa 234:phylum 212:phylum 94:" and 40:phylum 1036:S2CID 833:CRuMs 336:CRuMs 318:fungi 48:phyla 23:, in 1222:ISSN 1116:PMID 1028:PMID 985:PMID 526:TSAR 457:bold 374:and 366:and 346:and 292:and 280:and 196:and 164:and 146:TSAR 1249:doi 1245:100 1212:doi 1181:doi 1153:PMC 1143:doi 1108:doi 1077:PMC 1067:doi 1018:doi 975:doi 459:): 440:), 370:), 284:), 90:, " 86:", 82:, " 42:or 1269:: 1243:. 1220:. 1208:91 1206:. 1202:. 1177:55 1175:. 1151:, 1139:10 1137:, 1114:. 1106:. 1091:^ 1075:. 1063:36 1061:. 1057:. 1034:. 1026:. 1014:14 1012:. 1006:. 983:. 971:35 969:. 965:. 947:^ 935:. 448:, 444:, 384:". 342:, 316:, 288:, 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Index

evolutionary biology
share one common ancestor
biological
taxonomy
phylum
kingdom
phyla
eukaryotic tree of life
monophyletic
paraphyletic
Protista
Amoebozoa
Opisthokonta
Excavata
Archaeplastida
Chromalveolata
Rhizaria
paraphyletic
morphological

protists
Telonemia
Picozoa
Hemimastigophora
Rigifilida
phylogenomic
TSAR
Telonemia
SAR clade
Stramenopiles

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