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SMG6

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314: 291: 188: 213: 565: 2665: 320: 219: 2695: 29: 2680: 1292:. This 14–3–3-like domain and a C-terminal helical hairpins domain with seven α-helices stacked perpendicular to the 14–3–3-like domain together form a monomeric tetratricopeptide region (TPR). Differences in the orientation and specific residues in the TPR between SMG6 and its homologs may account for why SMG6 does not form a 1373:
A multi-locus genetic risk score study based on a combination of 27 loci, including the SMG6 gene, identified individuals at increased risk for both incident and recurrent coronary artery disease events, as well as an enhanced clinical benefit from statin therapy. The study was based on a community
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reverse transcriptase to lengthen telomeres. Overexpression of SMG6 induces anaphase bridges due to chromosome-end fusions and, thus, affects telomere capping, which may directly induce an apoptotic response. SMG6 also functions as an
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Hoff C, Seranski P, Mollenhauer J, Korn B, Detzel T, Reinhardt R, Ramser J, Poustka A (November 2000). "Physical and transcriptional mapping of the 17p13.3 region that is frequently deleted in human cancer".
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cohort study (the Malmo Diet and Cancer study) and four additional randomized controlled trials of primary prevention cohorts (JUPITER and ASCOT) and secondary prevention cohorts (CARE and PROVE IT-TIMI 22).
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Mega JL, Stitziel NO, Smith JG, Chasman DI, Caulfield MJ, Devlin JJ, Nordio F, Hyde CL, Cannon CP, Sacks FM, Poulter NR, Sever PS, Ridker PM, Braunwald E, Melander O, Kathiresan S, Sabatine MS (June 2015).
1357:(GWAS) on coronary artery disease. Accordingly, the association between recent smoking and the CpG sites within and near these coronary artery disease-related genes were investigated in 724 2239:
Nakajima D, Okazaki N, Yamakawa H, Kikuno R, Ohara O, Nagase T (June 2002). "Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones".
327: 226: 2280:"Prediction of the coding sequences of unidentified human genes. XI. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro" 1365:
sites were found in SMG6 together with other genes, and several of these sites exhibited lower methylation in subjects currently smoking compared to never smoking.
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Takeshita D, Zenno S, Lee WC, Saigo K, Tanokura M (September 2007). "Crystal structure of the PIN domain of human telomerase-associated protein EST1A".
2345:"Characterization of human Smg5/7a: a protein with similarities to Caenorhabditis elegans SMG5 and SMG7 that functions in the dephosphorylation of Upf1" 1907:
Takeshita D, Zenno S, Lee WC, Saigo K, Tanokura M (September 2007). "Crystal structure of the PIN domain of human telomerase-associated protein EST1A".
859: 149: 1763:"Genetic risk, coronary heart disease events, and the clinical benefit of statin therapy: an analysis of primary and secondary prevention trials" 1450: 2723: 2644: 1432: 2664: 2694: 313: 52: 1113: 290: 1106: 1572: 2051:, Broccoli D, Dai Y, Hardy S, de Lange T (February 1999). "p53- and ATM-dependent apoptosis induced by telomeres lacking TRF2". 1419: 1398: 2679: 1334: 2386:
Ohnishi T, Yamashita A, Kashima I, Schell T, Anders KR, Grimson A, Hachiya T, Hentze MW, Anderson P, Ohno S (November 2003).
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Steenaard RV, Ligthart S, Stolk L, Peters MJ, van Meurs JB, Uitterlinden AG, Hofman A, Franco OH, Dehghan A (2015-01-01).
1354: 1337:(PTC)-containing mRNAs in human cells. SMG6 cleaves mRNA near the premature translocation-termination codons and requires 1394: 120:, C17orf31, EST1A, SMG-6, hSMG5/7a, nonsense mediated mRNA decay factor, SMG6 nonsense mediated mRNA decay factor, hEST1A 1204: 129: 2001:"Phospho-dependent and phospho-independent interactions of the helicase UPF1 with the NMD factors SMG5-SMG7 and SMG6" 326: 225: 2637: 319: 218: 1261: 923: 137: 1183:. It is ubiquitously expressed in many tissues and cell types. The C-terminus of the EST1A protein contains a 2278:
Nagase T, Ishikawa K, Suyama M, Kikuno R, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O (October 1998).
1326: 1216: 904: 2248: 2388:"Phosphorylation of hUPF1 induces formation of mRNA surveillance complexes containing hSMG-5 and hSMG-7" 1473:"A human homolog of yeast Est1 associates with telomerase and uncaps chromosome ends when overexpressed" 1188: 1180: 201: 2544:"Structures of the PIN domains of SMG6 and SMG5 reveal a nuclease within the mRNA surveillance complex" 1860:"Structures of the PIN domains of SMG6 and SMG5 reveal a nuclease within the mRNA surveillance complex" 2630: 1245: 116: 2253: 1200: 1192: 1089: 1064: 1060: 1056: 1030: 1005: 1001: 997: 993: 2137:"A novel phosphorylation-independent interaction between SMG6 and UPF1 is essential for human NMD" 2610: 2487: 2458:"The human RNA surveillance factor UPF1 is required for S phase progression and genome stability" 1932: 1690: 1554: 1502: 161: 1068: 1009: 1659:
Snow BE, Erdmann N, Cruickshank J, Goldman H, Gill RM, Robinson MO, Harrington L (April 2003).
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Snow BE, Erdmann N, Cruickshank J, Goldman H, Gill RM, Robinson MO, Harrington L (April 2003).
2602: 2573: 2530: 2479: 2444: 2409: 2374: 2331: 2301: 2266: 2217: 2166: 2117: 2088:"SMG6 is the catalytic endonuclease that cleaves mRNAs containing nonsense codons in metazoan" 2068: 2030: 1981: 1952:"SMG6 is the catalytic endonuclease that cleaves mRNAs containing nonsense codons in metazoan" 1924: 1889: 1792: 1739: 1710:"SMG6 is the catalytic endonuclease that cleaves mRNAs containing nonsense codons in metazoan" 1682: 1641: 1546: 1494: 1293: 109: 45: 1811:"SMG6 SMG6, nonsense mediated mRNA decay factor [Homo sapiens (human)] - Gene - NCBI" 1268:
activity. The PIN domain forms an alpha/beta fold structure that similar to that found in 5'
2594: 2563: 2555: 2520: 2512: 2469: 2434: 2399: 2364: 2356: 2323: 2291: 2258: 2207: 2197: 2186:"Tobacco smoking is associated with methylation of genes related to coronary artery disease" 2156: 2148: 2107: 2099: 2060: 2020: 2012: 1971: 1963: 1916: 1879: 1871: 1782: 1774: 1729: 1721: 1672: 1631: 1623: 1536: 1484: 564: 406: 337: 281: 236: 1835:"SMG6 - Telomerase-binding protein EST1A - Homo sapiens (Human) - SMG6 gene & protein" 381: 157: 2568: 2543: 2525: 2500: 2421:
Fukuhara N, Ebert J, Unterholzner L, Lindner D, Izaurralde E, Conti E (February 2005).
2369: 2344: 2212: 2185: 2161: 2136: 2112: 2087: 2025: 2000: 1976: 1951: 1884: 1859: 1787: 1762: 1734: 1709: 1636: 1611: 1358: 1281: 2404: 2387: 1778: 1677: 1660: 1541: 1524: 1489: 1472: 793: 788: 783: 778: 773: 768: 763: 758: 753: 748: 743: 738: 722: 717: 712: 707: 702: 697: 692: 687: 682: 666: 661: 656: 651: 646: 641: 636: 631: 626: 621: 616: 611: 606: 28: 2717: 2048: 1277: 593: 2614: 2491: 1936: 1506: 141: 1694: 1573:"Entrez Gene: SMG6 Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)" 1558: 1322: 1316:
surveillance pathways. SMG6 binds single-stranded telomere DNA and cooperates with
1265: 399: 178: 2064: 1586: 2501:"Crystallization and preliminary X-ray analysis of the PIN domain of human EST1A" 2439: 2422: 1612:"Crystallization and preliminary X-ray analysis of the PIN domain of human EST1A" 165: 1471:
Reichenbach P, Höss M, Azzalin CM, Nabholz M, Bucher P, Lingner J (April 2003).
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National Center for Biotechnology Information, U.S. National Library of Medicine
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National Center for Biotechnology Information, U.S. National Library of Medicine
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Huntzinger E, Kashima I, Fauser M, Saulière J, Izaurralde E (December 2008).
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Huntzinger E, Kashima I, Fauser M, Saulière J, Izaurralde E (December 2008).
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Huntzinger E, Kashima I, Fauser M, Saulière J, Izaurralde E (December 2008).
2262: 823: 542: 420: 365: 352: 264: 251: 153: 2606: 2577: 2534: 2483: 2448: 2423:"SMG7 is a 14-3-3-like adaptor in the nonsense-mediated mRNA decay pathway" 2413: 2378: 2335: 2327: 2270: 2221: 2170: 2121: 2072: 2034: 1985: 1928: 1893: 1796: 1743: 1686: 1645: 1550: 1498: 1353:
In humans, selected genomic regions based on 150 SNPs were identified in a
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Chakrabarti S, Bonneau F, Schüssler S, Eppinger E, Conti E (August 2014).
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Nicholson P, Josi C, Kurosawa H, Yamashita A, Mühlemann O (August 2014).
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SMG6 is broadly expressed in all human tissues. It has dual functions in
1269: 1257: 1241: 1196: 1137: 968: 949: 2360: 2103: 1967: 1725: 2598: 1920: 935: 890: 86: 82: 78: 74: 1264:. It contains a PIN domain, which is characteristic of proteins with 1169: 1121: 845: 1661:"Functional conservation of the telomerase protein Est1p in humans" 1525:"Functional conservation of the telomerase protein Est1p in humans" 759:
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
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gene resides on chromosome 17 at the band 17p13.3 and contains 30
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Glavan F, Behm-Ansmant I, Izaurralde E, Conti E (November 2006).
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Glavan F, Behm-Ansmant I, Izaurralde E, Conti E (November 2006).
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that functions to cleave single-stranded RNA. SMG6 also shares a
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Takeshita D, Zenno S, Lee WC, Saigo K, Tanokura M (July 2006).
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Takeshita D, Zenno S, Lee WC, Saigo K, Tanokura M (July 2006).
2622: 1313: 1187:. This structure for this domain has been determined by 389: 1329:
pathway. The catalytic activity of SMG6 resides in its
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Chiu SY, Serin G, Ohara O, Maquat LE (January 2003).
554: 2673:: Crystal structure of the PIN domain of human EST1A 2703:: Structure of human SMG6 E1282C PIN domain mutant. 1082: 1049: 1023: 986: 764:
RNA phosphodiester bond hydrolysis, endonucleolytic
1411: 1409: 1407: 1390: 1388: 1386: 1361:subjects from the Rotterdam Study. The identified 779:regulation of telomere maintenance via telomerase 336: 235: 1272:. Within the PIN domain is a canonical triad of 16:Protein-coding gene in the species Homo sapiens 1518: 1516: 1466: 1464: 1416:GRCm38: Ensembl release 89: ENSMUSG00000038290 2638: 8: 1395:GRCh38: Ensembl release 89: ENSG00000070366 1333:, which is required for the degradation of 739:nucleic acid phosphodiester bond hydrolysis 2645: 2631: 2623: 819: 589: 377: 276: 173: 63: 2567: 2524: 2473: 2438: 2403: 2368: 2295: 2252: 2211: 2201: 2160: 2111: 2024: 1975: 1883: 1786: 1733: 1676: 1635: 1540: 1488: 1335:premature translation termination codons 2688:: Structure of PIN domain of human SMG6 2660: 2456:Azzalin CM, Lingner J (February 2006). 1382: 749:negative regulation of telomere capping 1280:-binding domain resembling the one in 18: 1755: 1753: 1296:with SMG5 and SMG7 when recruited by 341: 302: 297: 240: 199: 194: 7: 789:telomere maintenance via telomerase 1587:"BioGPS - your Gene Portal System" 1215:associated with increased risk of 1079: 1046: 1020: 983: 959: 940: 914: 895: 869: 850: 794:RNA phosphodiester bond hydrolysis 774:regulation of telomere maintenance 559: 477: 415: 394: 14: 1172:that in humans is encoded by the 784:regulation of telomerase activity 708:telomerase catalytic core complex 662:ribonucleoprotein complex binding 2693: 2678: 2663: 2505:Acta Crystallographica Section F 1616:Acta Crystallographica Section F 1345:to reduce reporter mRNA levels. 1166:Telomerase-binding protein EST1A 563: 325: 318: 312: 289: 224: 217: 211: 186: 27: 754:regulation of dephosphorylation 574:More reference expression data 543:More reference expression data 467:right hemisphere of cerebellum 1: 2405:10.1016/S1097-2765(03)00443-X 2065:10.1126/science.283.5406.1321 1779:10.1016/S0140-6736(14)61730-X 1678:10.1016/s0960-9822(03)00210-0 1542:10.1016/S0960-9822(03)00210-0 1490:10.1016/S0960-9822(03)00173-8 1355:genome-wide association study 1284:with its other two homologs, 1211:gene also contains one of 27 718:telomerase holoenzyme complex 310: 209: 2724:Genes on human chromosome 17 2440:10.1016/j.molcel.2005.01.010 1205:nonsense-mediated mRNA decay 1185:PilT N-terminus (PIN) domain 1256:SMG6 is one of three human 769:regulation of RNA stability 431:stromal cell of endometrium 2740: 693:exon-exon junction complex 2658: 2517:10.1107/S1744309106020057 2475:10.1016/j.cub.2006.01.018 2203:10.1186/s13148-015-0088-y 1628:10.1107/S1744309106020057 1451:"Mouse PubMed Reference:" 1433:"Human PubMed Reference:" 1191:. SMG6 functions to bind 1152: 1147: 1143: 1136: 1120: 1101: 1086: 1053: 1042: 1027: 990: 979: 966: 962: 947: 943: 934: 921: 917: 902: 898: 889: 876: 872: 857: 853: 844: 829: 822: 818: 802: 652:endoribonuclease activity 592: 588: 571: 562: 553: 540: 489: 480: 427: 418: 388: 380: 376: 359: 346: 309: 288: 279: 275: 258: 245: 208: 185: 176: 172: 127: 124: 114: 107: 102: 71: 66: 49: 44: 39: 35: 26: 21: 2560:10.1038/sj.emboj.7601377 1876:10.1038/sj.emboj.7601377 1262:Saccharomyces cerevisiae 1114:Chr 11: 74.82 – 75.06 Mb 744:mRNA export from nucleus 529:Rostral migratory stream 1240:. This gene produces 3 1217:coronary artery disease 2328:10.1006/geno.2000.6353 2297:10.1093/dnares/5.5.277 2141:Nucleic Acids Research 2005:Nucleic Acids Research 647:telomerase RNA binding 622:DNA polymerase binding 2263:10.1093/dnares/9.3.99 1349:Clinical significance 1189:X-ray crystallography 1107:Chr 17: 2.06 – 2.3 Mb 667:ribonuclease activity 637:endonuclease activity 612:telomeric DNA binding 304:Chromosome 11 (mouse) 202:Chromosome 17 (human) 2190:Clinical Epigenetics 1815:www.ncbi.nlm.nih.gov 1246:alternative splicing 67:List of PDB id codes 40:Available structures 2361:10.1261/rna.2137903 2104:10.1261/rna.1386208 1968:10.1261/rna.1386208 1726:10.1261/rna.1386208 1260:for Est1p found in 1201:single-stranded RNA 1193:single-stranded DNA 463:ganglionic eminence 2599:10.1002/prot.21351 2153:10.1093/nar/gku645 2017:10.1093/nar/gku578 1921:10.1002/prot.21351 924:ENSMUSG00000038290 732:Biological process 676:Cellular component 642:hydrolase activity 600:Molecular function 517:supraoptic nucleus 459:anterior pituitary 2711: 2710: 1773:(9984): 2264–71. 1163: 1162: 1159: 1158: 1132: 1131: 1097: 1096: 1076: 1075: 1038: 1037: 1017: 1016: 975: 974: 956: 955: 930: 929: 911: 910: 885: 884: 866: 865: 814: 813: 632:nuclease activity 617:metal ion binding 584: 583: 580: 579: 549: 548: 536: 535: 474: 473: 372: 371: 271: 270: 98: 97: 94: 93: 50:Ortholog search: 2731: 2697: 2682: 2667: 2647: 2640: 2633: 2624: 2618: 2581: 2571: 2548:The EMBO Journal 2538: 2528: 2495: 2477: 2452: 2442: 2417: 2407: 2382: 2372: 2339: 2309: 2299: 2274: 2256: 2226: 2225: 2215: 2205: 2181: 2175: 2174: 2164: 2132: 2126: 2125: 2115: 2083: 2077: 2076: 2059:(5406): 1321–5. 2045: 2039: 2038: 2028: 1996: 1990: 1989: 1979: 1947: 1941: 1940: 1904: 1898: 1897: 1887: 1864:The EMBO Journal 1855: 1849: 1848: 1846: 1845: 1831: 1825: 1824: 1822: 1821: 1807: 1801: 1800: 1790: 1757: 1748: 1747: 1737: 1705: 1699: 1698: 1680: 1656: 1650: 1649: 1639: 1607: 1601: 1600: 1598: 1597: 1583: 1577: 1576: 1569: 1563: 1562: 1544: 1520: 1511: 1510: 1492: 1468: 1459: 1458: 1447: 1441: 1440: 1429: 1423: 1413: 1402: 1392: 1312:maintenance and 1199:maintenance and 1145: 1144: 1116: 1109: 1092: 1080: 1071: 1047: 1043:RefSeq (protein) 1033: 1021: 1012: 984: 960: 941: 915: 896: 870: 851: 820: 590: 576: 567: 560: 545: 525:ventricular zone 521:secondary oocyte 509:genital tubercle 485: 483:Top expressed in 478: 455:ventricular zone 423: 421:Top expressed in 416: 395: 378: 368: 355: 344: 329: 322: 316: 305: 293: 277: 267: 254: 243: 228: 221: 215: 204: 190: 174: 168: 166:SMG6 - orthologs 119: 112: 89: 64: 58: 37: 36: 31: 19: 2739: 2738: 2734: 2733: 2732: 2730: 2729: 2728: 2714: 2713: 2712: 2707: 2704: 2698: 2689: 2683: 2674: 2668: 2654: 2651: 2621: 2584: 2554:(21): 5117–25. 2541: 2511:(Pt 7): 656–8. 2498: 2462:Current Biology 2455: 2420: 2398:(5): 1187–200. 2385: 2342: 2312: 2277: 2238: 2234: 2232:Further reading 2229: 2183: 2182: 2178: 2147:(14): 9217–35. 2134: 2133: 2129: 2098:(12): 2609–17. 2085: 2084: 2080: 2047: 2046: 2042: 2011:(14): 9447–60. 1998: 1997: 1993: 1962:(12): 2609–17. 1949: 1948: 1944: 1906: 1905: 1901: 1870:(21): 5117–25. 1857: 1856: 1852: 1843: 1841: 1839:www.uniprot.org 1833: 1832: 1828: 1819: 1817: 1809: 1808: 1804: 1759: 1758: 1751: 1720:(12): 2609–17. 1707: 1706: 1702: 1665:Current Biology 1658: 1657: 1653: 1622:(Pt 7): 656–8. 1609: 1608: 1604: 1595: 1593: 1585: 1584: 1580: 1571: 1570: 1566: 1529:Current Biology 1522: 1521: 1514: 1477:Current Biology 1470: 1469: 1462: 1449: 1448: 1444: 1431: 1430: 1426: 1414: 1405: 1393: 1384: 1380: 1371: 1369:Clinical marker 1351: 1306: 1282:14–3–3 proteins 1274:acidic residues 1254: 1230: 1225: 1154:View/Edit Mouse 1149:View/Edit Human 1112: 1105: 1102:Location (UCSC) 1088: 1067: 1063: 1059: 1055: 1029: 1008: 1004: 1000: 996: 992: 905:ENSG00000070366 798: 727: 671: 627:protein binding 572: 541: 532: 527: 523: 519: 515: 511: 507: 503: 499: 497:ascending aorta 495: 481: 470: 465: 461: 457: 453: 449: 445: 441: 437: 433: 419: 363: 350: 342: 332: 331: 330: 323: 303: 280:Gene location ( 262: 249: 241: 231: 230: 229: 222: 200: 177:Gene location ( 128: 115: 108: 73: 51: 17: 12: 11: 5: 2737: 2735: 2727: 2726: 2716: 2715: 2709: 2708: 2706: 2705: 2699: 2692: 2690: 2684: 2677: 2675: 2669: 2662: 2659: 2656: 2655: 2652: 2650: 2649: 2642: 2635: 2627: 2620: 2619: 2582: 2539: 2496: 2453: 2427:Molecular Cell 2418: 2392:Molecular Cell 2383: 2340: 2310: 2275: 2254:10.1.1.500.923 2235: 2233: 2230: 2228: 2227: 2176: 2127: 2078: 2040: 1991: 1942: 1899: 1850: 1826: 1802: 1749: 1700: 1671:(8): 698–704. 1651: 1602: 1578: 1564: 1535:(8): 698–704. 1512: 1460: 1442: 1424: 1403: 1381: 1379: 1376: 1370: 1367: 1350: 1347: 1305: 1302: 1253: 1250: 1229: 1226: 1224: 1221: 1161: 1160: 1157: 1156: 1151: 1141: 1140: 1134: 1133: 1130: 1129: 1127: 1125: 1118: 1117: 1110: 1103: 1099: 1098: 1095: 1094: 1084: 1083: 1077: 1074: 1073: 1051: 1050: 1044: 1040: 1039: 1036: 1035: 1025: 1024: 1018: 1015: 1014: 988: 987: 981: 977: 976: 973: 972: 964: 963: 957: 954: 953: 945: 944: 938: 932: 931: 928: 927: 919: 918: 912: 909: 908: 900: 899: 893: 887: 886: 883: 882: 874: 873: 867: 864: 863: 855: 854: 848: 842: 841: 836: 831: 827: 826: 816: 815: 812: 811: 800: 799: 797: 796: 791: 786: 781: 776: 771: 766: 761: 756: 751: 746: 741: 735: 733: 729: 728: 726: 725: 720: 715: 710: 705: 700: 695: 690: 685: 679: 677: 673: 672: 670: 669: 664: 659: 654: 649: 644: 639: 634: 629: 624: 619: 614: 609: 603: 601: 597: 596: 586: 585: 582: 581: 578: 577: 569: 568: 557: 551: 550: 547: 546: 538: 537: 534: 533: 531: 530: 526: 522: 518: 514: 513:tail of embryo 510: 506: 502: 498: 494: 490: 487: 486: 475: 472: 471: 469: 468: 464: 460: 456: 452: 451:body of uterus 448: 444: 440: 436: 432: 428: 425: 424: 412: 411: 403: 392: 386: 385: 382:RNA expression 374: 373: 370: 369: 361: 357: 356: 348: 345: 340: 334: 333: 324: 317: 311: 307: 306: 301: 295: 294: 286: 285: 273: 272: 269: 268: 260: 256: 255: 247: 244: 239: 233: 232: 223: 216: 210: 206: 205: 198: 192: 191: 183: 182: 170: 169: 126: 122: 121: 113: 105: 104: 100: 99: 96: 95: 92: 91: 69: 68: 60: 59: 48: 42: 41: 33: 32: 24: 23: 15: 13: 10: 9: 6: 4: 3: 2: 2736: 2725: 2722: 2721: 2719: 2702: 2696: 2691: 2687: 2681: 2676: 2672: 2666: 2661: 2657: 2648: 2643: 2641: 2636: 2634: 2629: 2628: 2625: 2616: 2612: 2608: 2604: 2600: 2596: 2592: 2588: 2583: 2579: 2575: 2570: 2565: 2561: 2557: 2553: 2549: 2545: 2540: 2536: 2532: 2527: 2522: 2518: 2514: 2510: 2506: 2502: 2497: 2493: 2489: 2485: 2481: 2476: 2471: 2467: 2463: 2459: 2454: 2450: 2446: 2441: 2436: 2433:(4): 537–47. 2432: 2428: 2424: 2419: 2415: 2411: 2406: 2401: 2397: 2393: 2389: 2384: 2380: 2376: 2371: 2366: 2362: 2358: 2354: 2350: 2346: 2341: 2337: 2333: 2329: 2325: 2321: 2317: 2311: 2307: 2303: 2298: 2293: 2290:(5): 277–86. 2289: 2285: 2281: 2276: 2272: 2268: 2264: 2260: 2255: 2250: 2247:(3): 99–106. 2246: 2242: 2237: 2236: 2231: 2223: 2219: 2214: 2209: 2204: 2199: 2195: 2191: 2187: 2180: 2177: 2172: 2168: 2163: 2158: 2154: 2150: 2146: 2142: 2138: 2131: 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1396: 1391: 1389: 1387: 1383: 1377: 1375: 1368: 1366: 1364: 1360: 1356: 1348: 1346: 1344: 1340: 1336: 1332: 1328: 1324: 1319: 1315: 1311: 1303: 1301: 1299: 1295: 1291: 1287: 1283: 1279: 1278:phosphoserine 1275: 1271: 1267: 1263: 1259: 1251: 1249: 1247: 1243: 1239: 1235: 1227: 1222: 1220: 1218: 1214: 1210: 1206: 1202: 1198: 1194: 1190: 1186: 1182: 1181:chromosome 17 1178: 1175: 1171: 1167: 1155: 1150: 1146: 1142: 1139: 1135: 1128: 1126: 1123: 1119: 1115: 1111: 1108: 1104: 1100: 1093: 1091: 1085: 1081: 1078: 1072: 1070: 1066: 1062: 1058: 1052: 1048: 1045: 1041: 1034: 1032: 1026: 1022: 1019: 1013: 1011: 1007: 1003: 999: 995: 989: 985: 982: 980:RefSeq (mRNA) 978: 971: 970: 965: 961: 958: 952: 951: 946: 942: 939: 937: 933: 926: 925: 920: 916: 913: 907: 906: 901: 897: 894: 892: 888: 881: 880: 875: 871: 868: 862: 861: 856: 852: 849: 847: 843: 840: 837: 835: 832: 828: 825: 821: 817: 810: 806: 801: 795: 792: 790: 787: 785: 782: 780: 777: 775: 772: 770: 767: 765: 762: 760: 757: 755: 752: 750: 747: 745: 742: 740: 737: 736: 734: 731: 730: 724: 721: 719: 716: 714: 711: 709: 706: 704: 701: 699: 696: 694: 691: 689: 686: 684: 681: 680: 678: 675: 674: 668: 665: 663: 660: 658: 655: 653: 650: 648: 645: 643: 640: 638: 635: 633: 630: 628: 625: 623: 620: 618: 615: 613: 610: 608: 605: 604: 602: 599: 598: 595: 594:Gene ontology 591: 587: 575: 570: 566: 561: 558: 556: 552: 544: 539: 528: 524: 520: 516: 512: 508: 504: 500: 496: 492: 491: 488: 484: 479: 476: 466: 462: 458: 454: 450: 446: 442: 438: 434: 430: 429: 426: 422: 417: 414: 413: 410: 408: 404: 402: 401: 397: 396: 393: 391: 387: 383: 379: 375: 367: 362: 358: 354: 349: 343:11|11 B5 339: 335: 328: 321: 315: 308: 300: 296: 292: 287: 283: 278: 274: 266: 261: 257: 253: 248: 238: 234: 227: 220: 214: 207: 203: 197: 193: 189: 184: 180: 175: 171: 167: 163: 159: 155: 151: 147: 143: 139: 135: 131: 123: 118: 111: 106: 101: 90: 88: 84: 80: 76: 70: 65: 62: 61: 57: 54: 47: 43: 38: 34: 30: 25: 20: 2700: 2685: 2670: 2593:(4): 980–9. 2590: 2586: 2551: 2547: 2508: 2504: 2468:(4): 433–9. 2465: 2461: 2430: 2426: 2395: 2391: 2355:(1): 77–87. 2352: 2348: 2322:(1): 26–33. 2319: 2315: 2287: 2284:DNA Research 2283: 2244: 2241:DNA Research 2240: 2193: 2189: 2179: 2144: 2140: 2130: 2095: 2091: 2081: 2056: 2052: 2043: 2008: 2004: 1994: 1959: 1955: 1945: 1915:(4): 980–9. 1912: 1908: 1902: 1867: 1863: 1853: 1842:. Retrieved 1838: 1829: 1818:. Retrieved 1814: 1805: 1770: 1766: 1717: 1713: 1703: 1668: 1664: 1654: 1619: 1615: 1605: 1594:. Retrieved 1590: 1581: 1567: 1532: 1528: 1480: 1476: 1454: 1445: 1436: 1427: 1372: 1352: 1323:endonuclease 1307: 1266:ribonuclease 1255: 1233: 1231: 1208: 1173: 1165: 1164: 1090:NP_001002764 1087: 1065:NP_001269255 1061:NP_001243757 1057:NP_001243756 1054: 1031:NM_001002764 1028: 1006:NM_001282326 1002:NM_001256828 998:NM_001256827 994:NM_001170957 991: 967: 948: 922: 903: 877: 858: 838: 833: 505:spermatocyte 501:aortic valve 439:right testis 405: 398: 125:External IDs 72: 2653:PDB gallery 2049:Karlseder J 1363:methylation 1207:(NMD). The 657:RNA binding 607:DNA binding 447:left testis 443:right ovary 364:75,055,274 351:74,816,649 103:Identifiers 1844:2016-10-12 1820:2016-10-12 1596:2016-10-12 1591:biogps.org 1422:, May 2017 1401:, May 2017 1378:References 1331:PIN domain 1318:telomerase 698:chromosome 435:left ovary 409:(ortholog) 263:2,303,785 250:2,059,839 146:HomoloGene 2249:CiteSeerX 2196:(1): 54. 1359:Caucasian 1270:nucleases 1223:Structure 1069:NP_060045 1010:NM_017575 824:Orthologs 713:nucleolus 683:cytoplasm 493:spermatid 154:GeneCards 2718:Category 2615:43477604 2607:17557331 2587:Proteins 2578:17053788 2535:16820686 2492:17197870 2484:16488880 2449:15721257 2414:14636577 2379:12554878 2336:11087658 2316:Genomics 2271:12168954 2222:26015811 2171:25053839 2122:18974281 2073:10037601 2035:25013172 1986:18974281 1937:43477604 1929:17557331 1909:Proteins 1894:17053788 1797:25748612 1744:18974281 1687:12699629 1646:16820686 1551:12699629 1507:14423276 1499:12676087 1418:– 1397:– 1310:telomere 1304:Function 1258:homologs 1244:through 1242:isoforms 1197:telomere 1138:Wikidata 803:Sources: 703:telomere 2569:1630413 2526:2242961 2370:1370372 2306:9872452 2213:4443552 2162:4132754 2113:2590965 2053:Science 2026:4132714 1977:2590965 1885:1630413 1788:4608367 1735:2590965 1695:6685276 1637:2242961 1559:6685276 1420:Ensembl 1399:Ensembl 1325:in the 1294:complex 1252:Protein 936:UniProt 891:Ensembl 830:Species 809:QuickGO 723:nucleus 688:cytosol 384:pattern 242:17p13.3 142:2144117 110:Aliases 2613:  2605:  2576:  2566:  2533:  2523:  2490:  2482:  2447:  2412:  2377:  2367:  2334:  2304:  2269:  2251:  2220:  2210:  2169:  2159:  2120:  2110:  2071:  2033:  2023:  1984:  1974:  1935:  1927:  1892:  1882:  1795:  1785:  1767:Lancet 1742:  1732:  1693:  1685:  1644:  1634:  1557:  1549:  1505:  1497:  1170:enzyme 1168:is an 1124:search 1122:PubMed 969:P61406 950:Q86US8 879:103677 846:Entrez 555:BioGPS 134:610963 2611:S2CID 2488:S2CID 1933:S2CID 1691:S2CID 1555:S2CID 1503:S2CID 1238:exons 860:23293 839:Mouse 834:Human 805:Amigo 407:Mouse 400:Human 347:Start 282:Mouse 246:Start 179:Human 150:23024 2701:2hwx 2686:2hww 2671:2dok 2603:PMID 2574:PMID 2531:PMID 2480:PMID 2445:PMID 2410:PMID 2375:PMID 2332:PMID 2302:PMID 2267:PMID 2218:PMID 2167:PMID 2118:PMID 2069:PMID 2031:PMID 1982:PMID 1925:PMID 1890:PMID 1793:PMID 1740:PMID 1683:PMID 1642:PMID 1547:PMID 1495:PMID 1343:SMG1 1341:and 1339:UPF1 1298:UPF1 1290:SMG7 1288:and 1286:SMG5 1234:SMG6 1232:The 1228:Gene 1213:SNPs 1209:SMG6 1177:gene 1174:SMG6 390:Bgee 338:Band 299:Chr. 237:Band 196:Chr. 158:SMG6 130:OMIM 117:SMG6 87:4UM2 83:2HWX 79:2HWW 75:2DOK 56:RCSB 53:PDBe 22:SMG6 2595:doi 2564:PMC 2556:doi 2521:PMC 2513:doi 2470:doi 2435:doi 2400:doi 2365:PMC 2357:doi 2349:RNA 2324:doi 2292:doi 2259:doi 2208:PMC 2198:doi 2157:PMC 2149:doi 2108:PMC 2100:doi 2092:RNA 2061:doi 2057:283 2021:PMC 2013:doi 1972:PMC 1964:doi 1956:RNA 1917:doi 1880:PMC 1872:doi 1783:PMC 1775:doi 1771:385 1730:PMC 1722:doi 1714:RNA 1673:doi 1632:PMC 1624:doi 1537:doi 1485:doi 1327:NMD 1314:RNA 1203:in 1195:in 1179:on 360:End 259:End 162:OMA 138:MGI 46:PDB 2720:: 2609:. 2601:. 2591:68 2589:. 2572:. 2562:. 2552:25 2550:. 2546:. 2529:. 2519:. 2509:62 2507:. 2503:. 2486:. 2478:. 2466:16 2464:. 2460:. 2443:. 2431:17 2429:. 2425:. 2408:. 2396:12 2394:. 2390:. 2373:. 2363:. 2351:. 2347:. 2330:. 2320:70 2318:. 2300:. 2286:. 2282:. 2265:. 2257:. 2243:. 2216:. 2206:. 2192:. 2188:. 2165:. 2155:. 2145:42 2143:. 2139:. 2116:. 2106:. 2096:14 2094:. 2090:. 2067:. 2055:. 2029:. 2019:. 2009:42 2007:. 2003:. 1980:. 1970:. 1960:14 1958:. 1954:. 1931:. 1923:. 1913:68 1911:. 1888:. 1878:. 1868:25 1866:. 1862:. 1837:. 1813:. 1791:. 1781:. 1769:. 1765:. 1752:^ 1738:. 1728:. 1718:14 1716:. 1712:. 1689:. 1681:. 1669:13 1667:. 1663:. 1640:. 1630:. 1620:62 1618:. 1614:. 1589:. 1553:. 1545:. 1533:13 1531:. 1527:. 1515:^ 1501:. 1493:. 1481:13 1479:. 1475:. 1463:^ 1453:. 1435:. 1406:^ 1385:^ 1300:. 1248:. 1219:. 807:/ 366:bp 353:bp 265:bp 252:bp 160:; 156:: 152:; 148:: 144:; 140:: 136:; 132:: 85:, 81:, 77:, 2646:e 2639:t 2632:v 2617:. 2597:: 2580:. 2558:: 2537:. 2515:: 2494:. 2472:: 2451:. 2437:: 2416:. 2402:: 2381:. 2359:: 2353:9 2338:. 2326:: 2308:. 2294:: 2288:5 2273:. 2261:: 2245:9 2224:. 2200:: 2194:7 2173:. 2151:: 2124:. 2102:: 2075:. 2063:: 2037:. 2015:: 1988:. 1966:: 1939:. 1919:: 1896:. 1874:: 1847:. 1823:. 1799:. 1777:: 1746:. 1724:: 1697:. 1675:: 1648:. 1626:: 1599:. 1575:. 1561:. 1539:: 1509:. 1487:: 1457:. 1439:. 284:) 181:) 164::

Index


PDB
PDBe
RCSB
2DOK
2HWW
2HWX
4UM2
Aliases
SMG6
OMIM
610963
MGI
2144117
HomoloGene
23024
GeneCards
SMG6
OMA
SMG6 - orthologs
Human
Chromosome 17 (human)
Chr.
Chromosome 17 (human)
Chromosome 17 (human)
Genomic location for SMG6
Genomic location for SMG6
Band
bp
bp

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