Knowledge (XXG)

SPDEF

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Fowler M, Borazanci E, McGhee L, Pylant SW, Williams BJ, Glass J, et al. (January 2006). "RUNX1 (AML-1) and RUNX2 (AML-3) cooperate with prostate-derived Ets factor to activate transcription from the PSA upstream regulatory region".
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Wang Y, Feng L, Said M, Balderman S, Fayazi Z, Liu Y, et al. (May 2005). "Analysis of the 2.0 A crystal structure of the protein-DNA complex of the human PDEF Ets domain bound to the prostate specific antigen regulatory site".
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Ghadersohi A, Odunsi K, Lele S, Collins Y, Greco WR, Winston J, et al. (February 2004). "Prostate derived Ets transcription factor shows better tumor-association than other cancer-associated molecules".
1442:
Feldman RJ, Sementchenko VI, Gayed M, Fraig MM, Watson DK (August 2003). "Pdef expression in human breast cancer is correlated with invasive potential and altered gene expression".
1778: 315: 214: 1205:"PDEF, a novel prostate epithelium-specific ets transcription factor, interacts with the androgen receptor and activates prostate-specific antigen gene expression" 1641:
Rodabaugh KJ, Mhawech-Fauceglia P, Groth J, Lele S, Sood AK (January 2007). "Prostate-derived Ets factor is overexpressed in serous epithelial ovarian tumors".
1092:
PDEF is an ETS transcription factor expressed in prostate epithelial cells. It acts as an androgen-independent transactivator of PSA (MIM 176820) expression.
1386:
Chen H, Nandi AK, Li X, Bieberich CJ (January 2002). "NKX-3.1 interacts with prostate-derived Ets factor and regulates the activity of the PSA promoter".
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Chen H, Nandi AK, Li X, Bieberich CJ (January 2002). "NKX-3.1 interacts with prostate-derived Ets factor and regulates the activity of the PSA promoter".
800: 781: 137: 1772:: Analysis of the 2.0A crystal structure of the protein-DNA complex of human PDEF Ets domain bound to the prostate specific antigen regulatory site 1873: 1849: 1743: 1185: 1167: 1868: 1357:
Yamada N, Tamai Y, Miyamoto H, Nozaki M (January 2000). "Cloning and expression of the mouse Pse gene encoding a novel Ets family member".
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Lance V (1976). "Studies on the annual reproductive cycle of the female cobra, Naja naja. Seasonal variation in plasma inorganic ions".
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Chen H, Bieberich CJ (January 2005). "Structural and functional analysis of domains mediating interaction between NKX-3.1 and PDEF".
1023: 1016: 278: 1282: 1154: 1133: 1150: 200: 175: 52: 1129: 117: 1101: 314: 213: 307: 206: 1842: 1736: 845: 125: 826: 1409:"p62 overexpression in breast tumors and regulation by prostate-derived Ets factor in breast cancer cells" 1835: 1729: 189: 104: 999: 970: 944: 915: 1666: 1586: 1518: 149: 995: 974: 940: 919: 1709: 1658: 1629: 1578: 1548: 1510: 1481: 1451: 1430: 1395: 1374: 1345: 1305: 1261: 1226: 566: 559: 552: 97: 45: 1819: 1203:
Oettgen P, Finger E, Sun Z, Akbarali Y, Thamrongsak U, Boltax J, et al. (January 2000).
1699: 1691: 1650: 1619: 1611: 1570: 1540: 1502: 1473: 1420: 1366: 1337: 1253: 1216: 394: 325: 269: 224: 145: 1787:: Solution structure of the SAM_PNT-domain of ETS transcription factor PDEF (Prostate ets) 1678:
Park KS, Korfhagen TR, Bruno MD, Kitzmiller JA, Wan H, Wert SE, et al. (April 2007).
369: 1704: 1679: 1654: 1624: 1599: 28: 1370: 1341: 715: 710: 705: 700: 695: 690: 685: 680: 675: 670: 665: 660: 644: 628: 623: 618: 613: 608: 1862: 595: 1670: 1590: 1522: 129: 1815: 387: 166: 1615: 1244:
Johannessen JV, Finseth I (January 1983). "Electron micrographs in five minutes".
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Gunawardane RN, Sgroi DC, Wrobel CN, Koh E, Daley GQ, Brugge JS (December 2005).
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National Center for Biotechnology Information, U.S. National Library of Medicine
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National Center for Biotechnology Information, U.S. National Library of Medicine
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DNA-binding transcription repressor activity, RNA polymerase II-specific
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DNA-binding transcription factor activity, RNA polymerase II-specific
1803: 1680:"SPDEF regulates goblet cell hyperplasia in the airway epithelium" 1330:
Comparative Biochemistry and Physiology. A, Comparative Physiology
730: 726: 1811: 1086: 575: 121: 1725: 1600:"Novel role for PDEF in epithelial cell migration and invasion" 1407:
Thompson HG, Harris JW, Wold BJ, Lin F, Brody JP (April 2003).
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positive regulation of transcription by RNA polymerase II
676:
negative regulation of transcription by RNA polymerase II
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SAM pointed domain-containing Ets transcription factor
542: 988: 963: 933: 908: 1146: 1144: 1142: 1125: 1123: 1121: 324: 223: 1643:International Journal of Gynecological Pathology 716:regulation of transcription by RNA polymerase II 16:Protein-coding gene in the species Homo sapiens 1151:GRCm38: Ensembl release 89: ENSMUSG00000024215 1843: 1737: 8: 1130:GRCh38: Ensembl release 89: ENSG00000124664 701:positive regulation of cell fate commitment 681:negative regulation of cell fate commitment 1850: 1836: 1744: 1730: 1722: 741: 671:regulation of transcription, DNA-templated 591: 365: 264: 161: 63: 1703: 1623: 1424: 1220: 609:DNA-binding transcription factor activity 1277: 1275: 711:positive regulation of apoptotic process 1759: 1117: 691:intestinal epithelial cell development 481:crypt of lieberkuhn of small intestine 18: 1684:The Journal of Clinical Investigation 329: 290: 285: 228: 187: 182: 7: 1800: 1798: 1209:The Journal of Biological Chemistry 1822:. You can help Knowledge (XXG) by 1655:10.1097/01.pgp.0000225386.41244.bd 985: 960: 930: 905: 881: 862: 836: 817: 791: 772: 661:multicellular organism development 547: 465: 403: 382: 14: 1082:that in humans is encoded by the 1802: 1777: 1762: 1563:Journal of Cellular Biochemistry 1495:Journal of Cellular Biochemistry 686:lung goblet cell differentiation 565: 558: 551: 313: 306: 300: 277: 212: 205: 199: 174: 27: 576:More reference expression data 531:More reference expression data 439:olfactory zone of nasal mucosa 1: 1874:Human chromosome 6 gene stubs 1616:10.1158/0008-5472.CAN-05-1196 1371:10.1016/S0378-1119(99)00484-9 1342:10.1016/S0300-9629(76)80037-0 624:sequence-specific DNA binding 298: 197: 696:transcription, DNA-templated 1869:Genes on human chromosome 6 1890: 1797: 427:mucosa of transverse colon 1757: 1258:10.3109/01913128309140576 1246:Ultrastructural Pathology 1186:"Mouse PubMed Reference:" 1168:"Human PubMed Reference:" 1062: 1057: 1053: 1046: 1030: 1011: 992: 967: 956: 937: 912: 901: 888: 884: 869: 865: 856: 843: 839: 824: 820: 811: 798: 794: 779: 775: 766: 751: 744: 740: 724: 594: 590: 573: 550: 541: 528: 477: 468: 415: 406: 376: 368: 364: 347: 334: 297: 276: 267: 263: 246: 233: 196: 173: 164: 160: 115: 112: 102: 95: 90: 71: 66: 49: 44: 39: 35: 26: 21: 1100:SPDEF has been shown to 1024:Chr 17: 27.93 – 27.95 Mb 1017:Chr 6: 34.54 – 34.56 Mb 451:mucosa of sigmoid colon 1426:10.1038/sj.onc.1206325 1222:10.1074/jbc.275.2.1216 493:mucous cell of stomach 489:epithelium of stomach 292:Chromosome 17 (mouse) 666:cell differentiation 190:Chromosome 6 (human) 67:List of PDB id codes 40:Available structures 1610:(24): 11572–11580. 1478:10.3892/or.11.2.453 1810:This article on a 846:ENSMUSG00000024215 654:Biological process 638:Cellular component 602:Molecular function 443:buccal mucosa cell 1831: 1830: 1795: 1794: 1575:10.1002/jcb.20664 1545:10.1021/bi047352t 1539:(19): 7095–7106. 1507:10.1002/jcb.20297 1450:(15): 4626–4631. 1419:(15): 2322–2333. 1073: 1072: 1069: 1068: 1042: 1041: 1007: 1006: 982: 981: 952: 951: 927: 926: 897: 896: 878: 877: 852: 851: 833: 832: 807: 806: 788: 787: 736: 735: 586: 585: 582: 581: 537: 536: 524: 523: 462: 461: 360: 359: 259: 258: 154:SPDEF - orthologs 86: 85: 82: 81: 50:Ortholog search: 1881: 1852: 1845: 1838: 1806: 1799: 1781: 1766: 1746: 1739: 1732: 1723: 1717: 1707: 1696:10.1172/JCI29176 1674: 1637: 1627: 1594: 1556: 1526: 1489: 1466:Oncology Reports 1459: 1438: 1428: 1403: 1382: 1353: 1314: 1313: 1293: 1287: 1286: 1279: 1270: 1269: 1241: 1235: 1234: 1224: 1215:(2): 1216–1225. 1200: 1194: 1193: 1182: 1176: 1175: 1164: 1158: 1148: 1137: 1127: 1055: 1054: 1026: 1019: 1002: 986: 977: 961: 957:RefSeq (protein) 947: 931: 922: 906: 882: 863: 837: 818: 792: 773: 742: 592: 578: 569: 562: 555: 548: 533: 517:seminal vesicula 473: 471:Top expressed in 466: 455:lactiferous duct 423:nasal epithelium 411: 409:Top expressed in 404: 383: 366: 356: 343: 332: 317: 310: 304: 293: 281: 265: 255: 242: 231: 216: 209: 203: 192: 178: 162: 156: 107: 100: 77: 64: 58: 37: 36: 31: 19: 1889: 1888: 1884: 1883: 1882: 1880: 1879: 1878: 1859: 1858: 1857: 1856: 1796: 1791: 1788: 1782: 1773: 1767: 1753: 1750: 1720: 1677: 1640: 1604:Cancer Research 1597: 1559: 1529: 1492: 1462: 1444:Cancer Research 1441: 1406: 1388:Cancer Research 1385: 1356: 1327: 1323: 1321:Further reading 1318: 1317: 1298:Cancer Research 1295: 1294: 1290: 1281: 1280: 1273: 1243: 1242: 1238: 1202: 1201: 1197: 1184: 1183: 1179: 1166: 1165: 1161: 1149: 1140: 1128: 1119: 1114: 1098: 1064:View/Edit Mouse 1059:View/Edit Human 1022: 1015: 1012:Location (UCSC) 998: 994: 973: 969: 943: 939: 918: 914: 827:ENSG00000124664 720: 649: 633: 574: 564: 563: 557: 556: 529: 520: 515: 511: 507: 503: 499: 495: 491: 487: 483: 469: 458: 453: 449: 445: 441: 437: 435:mucosa of ileum 433: 429: 425: 421: 407: 351: 338: 331:17|17 A3.3 330: 320: 319: 318: 311: 291: 268:Gene location ( 250: 237: 229: 219: 218: 217: 210: 188: 165:Gene location ( 116: 103: 96: 73: 51: 17: 12: 11: 5: 1887: 1885: 1877: 1876: 1871: 1861: 1860: 1855: 1854: 1847: 1840: 1832: 1829: 1828: 1807: 1793: 1792: 1790: 1789: 1783: 1776: 1774: 1768: 1761: 1758: 1755: 1754: 1751: 1749: 1748: 1741: 1734: 1726: 1719: 1718: 1690:(4): 978–988. 1675: 1638: 1595: 1557: 1527: 1501:(1): 168–177. 1490: 1472:(2): 453–458. 1460: 1439: 1404: 1394:(2): 338–340. 1383: 1365:(2): 267–274. 1354: 1336:(3): 285–289. 1324: 1322: 1319: 1316: 1315: 1304:(2): 338–340. 1288: 1271: 1236: 1195: 1177: 1159: 1138: 1116: 1115: 1113: 1110: 1097: 1094: 1071: 1070: 1067: 1066: 1061: 1051: 1050: 1044: 1043: 1040: 1039: 1037: 1035: 1028: 1027: 1020: 1013: 1009: 1008: 1005: 1004: 990: 989: 983: 980: 979: 965: 964: 958: 954: 953: 950: 949: 935: 934: 928: 925: 924: 910: 909: 903: 899: 898: 895: 894: 886: 885: 879: 876: 875: 867: 866: 860: 854: 853: 850: 849: 841: 840: 834: 831: 830: 822: 821: 815: 809: 808: 805: 804: 796: 795: 789: 786: 785: 777: 776: 770: 764: 763: 758: 753: 749: 748: 738: 737: 734: 733: 722: 721: 719: 718: 713: 708: 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1077: 1065: 1060: 1056: 1052: 1049: 1045: 1038: 1036: 1033: 1029: 1025: 1021: 1018: 1014: 1010: 1003: 1001: 997: 991: 987: 984: 978: 976: 972: 966: 962: 959: 955: 948: 946: 942: 936: 932: 929: 923: 921: 917: 911: 907: 904: 902:RefSeq (mRNA) 900: 893: 892: 887: 883: 880: 874: 873: 868: 864: 861: 859: 855: 848: 847: 842: 838: 835: 829: 828: 823: 819: 816: 814: 810: 803: 802: 797: 793: 790: 784: 783: 778: 774: 771: 769: 765: 762: 759: 757: 754: 750: 747: 743: 739: 732: 728: 723: 717: 714: 712: 709: 707: 704: 702: 699: 697: 694: 692: 689: 687: 684: 682: 679: 677: 674: 672: 669: 667: 664: 662: 659: 658: 656: 653: 652: 646: 643: 642: 640: 637: 636: 630: 627: 625: 622: 620: 617: 615: 612: 610: 607: 606: 604: 601: 600: 597: 596:Gene ontology 593: 589: 577: 572: 568: 561: 554: 549: 546: 544: 540: 532: 527: 516: 512: 508: 505:parotid gland 504: 500: 496: 492: 488: 484: 480: 479: 476: 472: 467: 464: 454: 450: 446: 442: 438: 434: 430: 426: 422: 419:parotid gland 418: 417: 414: 410: 405: 402: 401: 398: 396: 392: 390: 389: 385: 384: 381: 379: 375: 371: 367: 363: 355: 350: 346: 342: 337: 327: 323: 316: 309: 303: 296: 288: 284: 280: 275: 271: 266: 262: 254: 249: 245: 241: 236: 226: 222: 215: 208: 202: 195: 191: 185: 181: 177: 172: 168: 163: 159: 155: 151: 147: 143: 139: 135: 131: 127: 123: 119: 111: 106: 99: 94: 89: 78: 76: 70: 65: 62: 61: 57: 54: 47: 43: 38: 34: 30: 25: 20: 1824:expanding it 1816:chromosome 6 1809: 1784: 1769: 1687: 1683: 1649:(1): 10–15. 1646: 1642: 1607: 1603: 1566: 1562: 1536: 1533:Biochemistry 1532: 1498: 1494: 1469: 1465: 1447: 1443: 1416: 1412: 1391: 1387: 1362: 1358: 1333: 1329: 1301: 1297: 1291: 1249: 1245: 1239: 1212: 1208: 1198: 1189: 1180: 1171: 1162: 1099: 1096:Interactions 1091: 1083: 1075: 1074: 1000:NP_001344657 993: 971:NP_001239223 968: 945:NM_001357728 938: 916:NM_001252294 913: 889: 870: 844: 825: 799: 780: 760: 755: 393: 386: 113:External IDs 72: 1752:PDB gallery 1569:(1): 1–17. 614:DNA binding 501:Paneth cell 352:27,947,929 339:27,933,326 251:34,556,333 238:34,537,802 91:Identifiers 1863:Categories 1157:, May 2017 1136:, May 2017 1112:References 397:(ortholog) 134:HomoloGene 1814:on human 996:NP_038919 975:NP_036523 941:NM_013891 920:NM_012391 746:Orthologs 142:GeneCards 1714:17347682 1671:25880565 1663:17197890 1634:16357167 1591:20541109 1583:16237704 1553:15882048 1523:46494570 1515:15523673 1486:14719083 1456:12907642 1435:12700667 1413:Oncogene 1400:11809674 1379:10675039 1310:11809674 1231:10625666 1153:– 1132:– 1102:interact 1048:Wikidata 725:Sources: 509:duodenum 431:prostate 1705:1810569 1625:2919290 1266:6857767 1155:Ensembl 1134:Ensembl 1080:protein 858:UniProt 813:Ensembl 752:Species 731:QuickGO 645:nucleus 447:trachea 372:pattern 230:6p21.31 130:1353422 98:Aliases 1712:  1702:  1669:  1661:  1632:  1622:  1589:  1581:  1551:  1521:  1513:  1484:  1454:  1433:  1398:  1377:  1348:  1308:  1264:  1229:  1106:NKX3-1 1034:search 1032:PubMed 891:Q9WTP3 872:O95238 768:Entrez 543:BioGPS 122:608144 1818:is a 1667:S2CID 1587:S2CID 1519:S2CID 1104:with 1084:SPDEF 1078:is a 801:30051 782:25803 761:Mouse 756:Human 727:Amigo 395:Mouse 388:Human 335:Start 270:Mouse 234:Start 167:Human 146:SPDEF 105:SPDEF 22:SPDEF 1820:stub 1812:gene 1785:2dkx 1770:1yo5 1710:PMID 1659:PMID 1630:PMID 1579:PMID 1549:PMID 1511:PMID 1482:PMID 1452:PMID 1431:PMID 1396:PMID 1375:PMID 1359:Gene 1350:2437 1346:PMID 1306:PMID 1262:PMID 1227:PMID 1087:gene 378:Bgee 326:Band 287:Chr. 225:Band 184:Chr. 138:8231 118:OMIM 75:2DKX 56:RCSB 53:PDBe 1700:PMC 1692:doi 1688:117 1651:doi 1620:PMC 1612:doi 1571:doi 1541:doi 1503:doi 1474:doi 1421:doi 1367:doi 1363:241 1338:doi 1254:doi 1217:doi 1213:275 348:End 247:End 150:OMA 126:MGI 46:PDB 1865:: 1708:. 1698:. 1686:. 1682:. 1665:. 1657:. 1647:26 1645:. 1628:. 1618:. 1608:65 1606:. 1602:. 1585:. 1577:. 1567:97 1565:. 1547:. 1537:44 1535:. 1517:. 1509:. 1499:94 1497:. 1480:. 1470:11 1468:. 1448:63 1446:. 1429:. 1417:22 1415:. 1411:. 1392:62 1390:. 1373:. 1361:. 1344:. 1334:53 1332:. 1302:62 1300:. 1274:^ 1260:. 1248:. 1225:. 1211:. 1207:. 1188:. 1170:. 1141:^ 1120:^ 1108:. 1089:. 729:/ 354:bp 341:bp 253:bp 240:bp 148:; 144:: 140:; 136:: 132:; 128:: 124:; 120:: 1851:e 1844:t 1837:v 1826:. 1745:e 1738:t 1731:v 1716:. 1694:: 1673:. 1653:: 1636:. 1614:: 1593:. 1573:: 1555:. 1543:: 1525:. 1505:: 1488:. 1476:: 1458:. 1437:. 1423:: 1402:. 1381:. 1369:: 1352:. 1340:: 1312:. 1285:. 1268:. 1256:: 1250:4 1233:. 1219:: 1192:. 1174:. 272:) 169:) 152::

Index


PDB
PDBe
RCSB
2DKX
Aliases
SPDEF
OMIM
608144
MGI
1353422
HomoloGene
8231
GeneCards
SPDEF
OMA
SPDEF - orthologs
Human
Chromosome 6 (human)
Chr.
Chromosome 6 (human)
Chromosome 6 (human)
Genomic location for SPDEF
Genomic location for SPDEF
Band
bp
bp
Mouse
Chromosome 17 (mouse)
Chr.

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