Knowledge (XXG)

Shallot latent virus

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Mansouri F, Krahulec F, Duchoslav M, Ryšánek P (2021-05-21). "Newly identified host range of viruses infecting species of the genus Allium and their distribution in six habitats in the Czech Republic".
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Tsuneyoshi T, Matsumi T, Deng TC, Sako I, Sumi S (June 1998). "Differentiation of Allium carlaviruses isolated from different parts of the world based on the viral coat protein sequence".
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Santosa, Adyatma Irawan; Ertunc, Filiz (August 2020). "Identification, molecular detection and phylogenetic analysis of four viruses infecting Allium cepa in Ankara Province, Turkey".
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The virus is widespread in shallot and garlic without causing any clear symptoms, hence its name 'latent'. However, in mixed infection with
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Klukáčková J, Navrátil M, Duchoslav M (June 2007). "Natural infection of garlic (Allium sativum L.) by viruses in the Czech Republic".
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Ward LI, Perez-Egusquiza Z, Fletcher JD, Clover GR (2009). "A survey of viral diseases of Allium crops in New Zealand".
200:, the virus has been identified in shallot, which is widely grown and used as a food ingredient, and also in garlic. In 34: 896: 830: 480:"Incidence of Garlic common latent virus in Argentina, and phylogenetic and recombination analyses of isolates" 246: 529:"Molecular identification, incidence and phylogenetic analysis of seven viruses infecting garlic in Ethiopia" 792: 979: 852: 232: 29: 220: 719: 675: 460: 417: 374: 331: 611:"Viruses Occurring in Onion Crop in Amasya Province, the Major Onion Producing Region in Turkey" 883: 839: 772: 711: 640: 558: 509: 452: 409: 366: 323: 260: 930: 737:
Ohshima K, Okamura K, Yasaka R, Fukuda S, Ishimaru K, Tomitaka Y, Yamashita K (August 2017).
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Bos L, Huttinga H, Maat DZ (November 1978). "Shallot latent virus, a new carlavirus".
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province instead. However, SLV was not detected in onion samples collected in
164: 131: 758: 715: 513: 456: 413: 327: 865: 251: 204:, where shallot is less commonly cultivated, SLV was identified in onion in 197: 59: 776: 644: 562: 594: 577: 370: 362: 809: 504: 405: 319: 169: 707: 214: 209: 205: 201: 185: 786: 448: 255:) induces severe chlorotic and white stripes on shallot leaves. The 184:
Since its first detection in shallots, SLV has been found infecting
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does not transmit the virus. It is also mechanically transmitted.
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SLV genome (excluding poly-A tail) is around 8338 nt in length.
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Kadwati, Kadwati; Hidayat, Sri Hendrastuti (1 August 2015).
176:. The virus particle is elongated, 650 nm in length. 739:"First Genome Sequence of Shallot Latent Carlavirus from 934: 478:
Torrico AK, Celli MG, Conci LR, Conci VC (May 2015).
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province. Molecular study also detected SLV in other
799: 527:Abraham AD, Kidanemariam DB, Holton TA (May 2019). 609:Sevik, Mehmet Ali; Akcura, Cemile (June 2013). 954: 270:transmit SLV in a non-persistent manner, but 8: 961: 947: 787: 18: 766: 634: 593: 552: 503: 660:Journal of Plant Diseases and Protection 394:Journal of Plant Diseases and Protection 293: 308:Netherlands Journal of Plant Pathology 301: 299: 297: 7: 915: 913: 533:European Journal of Plant Pathology 933:. You can help Knowledge (XXG) by 14: 917: 484:Pesquisa Agropecuária Brasileira 33: 496:10.1590/S0100-204X2015000500003 1: 582:Jurnal Fitopatologi Indonesia 437:Australasian Plant Pathology 1001: 912: 672:10.1007/s41348-020-00347-5 615:Indian Journal of Virology 545:10.1007/s10658-019-01760-9 168:, was first identified in 985:Viral plant disease stubs 627:10.1007/s13337-012-0114-z 28: 21: 759:10.1128/genomeA.00809-17 247:leek yellow stripe virus 196:on five continents. In 595:10.14692/jfi.11.4.121 363:10.1007/s007050050358 831:Shallot latent virus 801:Shallot latent virus 747:Genome Announcements 351:Archives of Virology 233:Allium scorodoprasum 156:Shallot latent virus 146:Shallot latent virus 30:Virus classification 23:Shallot latent virus 221:Allium cyathophorum 741:Allium macrostemon 406:10.1007/BF03356714 320:10.1007/BF01987033 942: 941: 907: 906: 793:Taxon identifiers 708:10.1111/ppa.13391 261:Myzus ascalonicus 242:subsp. montanum. 153: 152: 992: 963: 956: 949: 921: 914: 900: 899: 887: 886: 874: 873: 861: 860: 848: 847: 835: 834: 833: 820: 819: 818: 788: 781: 780: 770: 734: 728: 727: 702:(6): 1496–1507. 690: 684: 683: 655: 649: 648: 638: 606: 600: 599: 597: 573: 567: 566: 556: 524: 518: 517: 507: 475: 469: 468: 432: 426: 425: 389: 383: 382: 346: 340: 339: 303: 239:Allium senescens 218:species such as 162:), a species of 121:Betaflexiviridae 38: 37: 19: 16:Species of virus 1000: 999: 995: 994: 993: 991: 990: 989: 970: 969: 968: 967: 910: 908: 903: 895: 890: 882: 877: 869: 864: 856: 851: 843: 838: 829: 828: 823: 814: 813: 808: 795: 785: 784: 736: 735: 731: 696:Plant Pathology 692: 691: 687: 657: 656: 652: 608: 607: 603: 575: 574: 570: 526: 525: 521: 477: 476: 472: 449:10.1071/AP09039 434: 433: 429: 391: 390: 386: 357:(6): 1093–107. 348: 347: 343: 305: 304: 295: 290: 282: 182: 149: 85:Kitrinoviricota 32: 17: 12: 11: 5: 998: 996: 988: 987: 982: 972: 971: 966: 965: 958: 951: 943: 940: 939: 922: 905: 904: 902: 901: 888: 875: 862: 849: 836: 821: 805: 803: 797: 796: 791: 783: 782: 729: 685: 666:(4): 561–569. 650: 601: 588:(4): 121–127. 568: 539:(1): 181–191. 519: 490:(5): 363–373. 470: 427: 384: 341: 314:(6): 227–237. 292: 291: 289: 286: 281: 278: 273:Myzus persicae 181: 178: 151: 150: 143: 141: 137: 136: 129: 125: 124: 117: 113: 112: 105: 101: 100: 93: 89: 88: 81: 77: 76: 69: 65: 64: 57: 50: 49: 44: 40: 39: 26: 25: 15: 13: 10: 9: 6: 4: 3: 2: 997: 986: 983: 981: 978: 977: 975: 964: 959: 957: 952: 950: 945: 944: 938: 936: 932: 929:article is a 928: 923: 920: 916: 911: 898: 893: 889: 885: 880: 876: 872: 867: 863: 859: 854: 850: 846: 841: 837: 832: 826: 822: 817: 811: 807: 806: 804: 802: 798: 794: 789: 778: 774: 769: 764: 760: 756: 752: 748: 744: 742: 733: 730: 725: 721: 717: 713: 709: 705: 701: 697: 689: 686: 681: 677: 673: 669: 665: 661: 654: 651: 646: 642: 637: 632: 628: 624: 620: 616: 612: 605: 602: 596: 591: 587: 583: 579: 572: 569: 564: 560: 555: 550: 546: 542: 538: 534: 530: 523: 520: 515: 511: 506: 501: 497: 493: 489: 485: 481: 474: 471: 466: 462: 458: 454: 450: 446: 442: 438: 431: 428: 423: 419: 415: 411: 407: 403: 400:(3): 97–100. 399: 395: 388: 385: 380: 376: 372: 368: 364: 360: 356: 352: 345: 342: 337: 333: 329: 325: 321: 317: 313: 309: 302: 300: 298: 294: 287: 285: 279: 277: 275: 274: 269: 268: 263: 262: 258: 254: 253: 248: 243: 241: 240: 235: 234: 229: 228: 223: 222: 217: 216: 211: 207: 203: 199: 195: 191: 187: 179: 177: 175: 171: 167: 166: 161: 157: 148: 147: 142: 139: 138: 135: 134: 130: 127: 126: 123: 122: 118: 115: 114: 111: 110: 106: 103: 102: 99: 98: 97:Alsuviricetes 94: 91: 90: 87: 86: 82: 79: 78: 75: 74: 73:Orthornavirae 70: 67: 66: 63: 62: 58: 55: 52: 51: 48: 45: 42: 41: 36: 31: 27: 24: 20: 980:Carlaviruses 935:expanding it 924: 909: 800: 750: 746: 740: 732: 699: 695: 688: 663: 659: 653: 621:(1): 78–81. 618: 614: 604: 585: 581: 571: 536: 532: 522: 487: 483: 473: 440: 436: 430: 397: 393: 387: 354: 350: 344: 311: 307: 283: 271: 265: 259: 250: 244: 237: 231: 225: 219: 213: 183: 180:Epidemiology 163: 159: 155: 154: 145: 144: 132: 120: 108: 96: 84: 72: 60: 53: 43:(unranked): 22: 927:plant virus 825:Wikispecies 505:11336/61854 267:Aphis fabae 227:Allium moly 174:Netherlands 109:Tymovirales 974:Categories 443:(5): 533. 288:References 165:Carlavirus 133:Carlavirus 816:Q18965602 724:235584351 716:0032-0862 680:225488130 514:0100-204X 457:0815-3191 414:1861-3829 328:0028-2944 252:Potyvirus 198:Indonesia 140:Species: 68:Kingdom: 61:Riboviria 884:11460765 858:11623358 810:Wikidata 777:28818904 645:24426263 563:33304030 465:39328059 422:56085690 379:19211402 336:32386688 170:shallots 116:Family: 80:Phylum: 768:5604777 636:3650194 554:7680954 371:9687867 249:(LYSV, 215:Allium 128:Genus: 104:Order: 92:Class: 871:SLV000 775:  765:  753:(33). 743:Bunge" 722:  714:  678:  643:  633:  561:  551:  512:  463:  455:  420:  412:  377:  369:  334:  326:  280:Genome 257:aphids 236:, and 210:Ankara 206:Amasya 202:Turkey 192:, and 186:garlic 925:This 897:12172 879:IRMNG 845:4X3WR 720:S2CID 676:S2CID 461:S2CID 418:S2CID 375:S2CID 332:S2CID 190:onion 54:Realm 47:Virus 931:stub 892:NCBI 866:EPPO 773:PMID 712:ISSN 641:PMID 559:PMID 510:ISSN 453:ISSN 410:ISSN 367:PMID 324:ISSN 264:and 194:leek 853:EoL 840:CoL 763:PMC 755:doi 704:doi 668:doi 664:127 631:PMC 623:doi 590:doi 549:PMC 541:doi 537:155 500:hdl 492:doi 445:doi 402:doi 398:114 359:doi 355:143 316:doi 172:in 160:SLV 976:: 894:: 881:: 868:: 855:: 842:: 827:: 812:: 771:. 761:. 749:. 745:. 718:. 710:. 700:70 698:. 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Index

Virus classification
Edit this classification
Virus
Riboviria
Orthornavirae
Kitrinoviricota
Alsuviricetes
Tymovirales
Betaflexiviridae
Carlavirus
Carlavirus
shallots
Netherlands
garlic
onion
leek
Indonesia
Turkey
Amasya
Ankara
Allium
Allium cyathophorum
Allium moly
Allium scorodoprasum
Allium senescens
leek yellow stripe virus
Potyvirus
aphids
Myzus ascalonicus
Aphis fabae

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