Knowledge

Simian immunodeficiency virus

Source πŸ“

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36-57% in adult males, while SIV infection is rare in immature individuals. SIV infected vervets in the wild do not develop chronic immune activation or microbial translocation (assessed by sCD14 as a surrogate biomarker). During natural SIV infection, the gut microbiome showed a significant increase in microbial diversity, a decrease in Proteobacteria/Succinivibrio and an increase of Veillonella, a decrease in genes involved in pathways of microbial invasion, and partial reversibility of acute infection-related shifts in microbial abundance. The pattern of natural selection in the monkey genome in genes involved in HIV responses and those regulated in response to experimental SIV infection in monkeys, but not macaques, suggests a natural adaptation to SIV in Chlorocebus monkeys in Africa.
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Disease progression to AIDS occurs within a period of months to years, depending upon the SIV strain used. Non-pathogenic infection is typified by African NHPs naturally infected with SIV. These animals rarely progress to AIDS despite maintaining viral loads that are equivalent to SIV viral loads in pathogenic infections. It is postulated that AIDS-like disease in African NHPs represents horizontal transmission of the virus from one or more homologous species in the recent evolutionary past, before equilibrium of co-adaptation has occurred.
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suffering from simian AIDS (SAIDS). The discovery of SIV was made shortly after HIV-1 had been isolated as the cause of AIDS and led to the discovery of HIV-2 strains in West Africa. HIV-2 was more similar to the then-known SIV strains than to HIV-1, suggesting for the first time the simian origin of
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While human immunodeficiency virus has a limited number of subtypes, SIV is now known to infect a few dozen species of non-human primates, and distinct strains are often associated with each species, or with a set of closely related species. The thus far categorized ~40 strains are divided into five
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SIV pathogenesis encompasses both pathogenic and non-pathogenic SIV infections. SIV infection of non-human primates (NHPs) invariably results in persistent infection, but rarely acute disease. Pathogenic infection is typified by Rhesus macaques infected with SIV strains derived from sooty mangabeys.
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analyses of sequences, it was previously thought by many that SIV infection in monkeys had happened over the past few hundred years. Scientists estimated that it would take a similar amount of time before humans would adapt naturally to HIV infection in the way monkeys in Africa have adapted to SIV
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In 2008, discovery of an endogenous lentivirus in a prosimian (proto-monkey) primate, the gray mouse lemur native to Madagascar, pushed the origin of SIV-like lentivirus infections in primates back to at least 14 Ma, the last time there was intermingling of mammals between the island of Madagascar
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Unlike SIVsmm infection in sooty mangabeys, a recent study of SIVcpz in wild living chimpanzees suggests that infected chimpanzees experience an AIDS-like illness similar to HIV-1 infected humans. The later stages of SIV infection develop into sAIDS, much like how HIV infection develops into AIDS.
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in Africa. Four subtypes of HIV-1 (M, N, O, and P) likely arose through four separate transmissions of SIV to humans, and the resulting HIV-1 group M strain most commonly infects people worldwide. Therefore, it is theorized that SIV may have previously crossed the species barrier into human hosts
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and a team of researchers in 2009 found that chimpanzees do die from simian AIDS in the wild and that the AIDS outbreak in Africa has contributed to the decline of chimpanzee populations. Testing wild chimpanzees, researchers detected organ and tissue damage similar to late-stage human AIDS. The
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African green monkeys (also called vervets, genus Chlorocebus) in African populations are heavily infected with SIVagm, while the virus is absent in the founder isolate vervet populations in the Caribbean. The prevalence of SIV infection in African populations ranges 78-90% in adult females and
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Unlike HIV-1 and HIV-2 infections in humans, SIV infections in their natural simian non-human hosts appear in many cases to be non-pathogenic due to evolutionary adaptation of the hosts to the virus. Extensive studies in sooty mangabeys have established that SIVsmm infection does not cause any
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In 2013, a study by a group of authors reported on successful testing of a vaccine containing SIV protein-expressing rhesus cytomegalovirus vector. Approximately 50% of vaccinated rhesus macaques manifested durable, aviraemic control of infection with the highly pathogenic strain SIVmac239.
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and the African mainland, if the infection is attributed to horizontal transmission between homologous hosts. If the virus was coevolved with the host, rather than acquired, that potentially pushes the date of the endogenous event back to approx. 85 Ma, the split between the
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that cause AIDS, and a few other viruses that infect other primates. Related viruses in other groups in the genus infect other mammals like sheep and goats, horses, cattle, cats, and a few others. The genus is one of six genera in subfamily
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infected chimpanzees had a 10 to 16 times greater risk of dying than uninfected ones; infected females were less likely to give birth, could pass the virus to their infants, and had a higher infant mortality rate than uninfected females.
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HIV. Further studies indicated that HIV-2 is derived from the SIVsmm strain found in sooty mangabeys, whereas HIV-1, the predominant virus found in humans, is derived from SIV strains infecting chimpanzees (SIVcpz).
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do not necessarily give rise to population-wide new organisms. The rate of proliferation of quasispecies has significant implication for host immune control, and therefore virulence of the organism.
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It is not believed that chimpanzees are the original hosts of an independent lineage of SIV, but rather that SIVcpz is a relatively recent acquisition resulting from a recombination of SIVgsn (
2764:"Discovery and full genome characterization of two highly divergent simian immunodeficiency viruses infecting black-and-white colobus monkeys (Colobus guereza) in Kibale National Park, Uganda" 1951: 1768:
The SIV virion is a spherical to pleomorphic glycoprotein envelope 110-120 nm across enclosing a 110x50nm truncated cone or wedge-shaped (occasionally rod) capsid containing a
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Immunodeficiency resembling human AIDS was reported in captive monkeys in the United States beginning in 1983. SIV was isolated in 1985 from some of these animals, captive
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In addition to the subgroups defined for extent SIVs, two endogenous SIVs are found in prosimian lemurs. These paleo-SIVs form a basal branch relative to extant SIVs.
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code of SIV is 61.0.6.5.003. Although HIV-1 and HIV-2 cladistically fall into SIV, ICTV considers them distinct species from ordinary, non-human-infecting SIV.
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Daniel MD, Letvin NL, King NW, Kannagi M, Sehgal PK, Hunt RD, et al. (June 1985). "Isolation of T-cell tropic HTLV-III-like retrovirus from macaques".
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Worobey M, Telfer P, SouquiΓ¨re S, Hunter M, Coleman CA, Metzger MJ, et al. (September 2010). "Island biogeography reveals the deep history of SIV".
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viruses. The most likely route of transmission of HIV-1 to humans involves contact with the blood of chimps and gorillas that are often hunted for
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about 11,000 years ago, it has been concluded that SIV has been present in monkeys and apes for at least 32,000 years, and probably much longer.
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The speed and transcription inaccuracies of RNA viruses give rise to antigenically distinct varieties in a single host animal. These
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Peeters M, Courgnaud V (2002). Kuiken C, Foley B, Freed E, Hahn B, Korber B, Marx PA, McCutchan FE, Mellors JW, Wolinsky S (eds.).
3321:"SIVagm infection in wild African green monkeys from South Africa: epidemiology, natural history, and evolutionary considerations" 2307:. HIV sequence compendium. Los Alamos, NM: Theoretical Biology and Biophysics Group, Los Alamos National Laboratory. pp. 2–23 4826: 2196: 3912: 3897: 4925: 4687: 2240: 259:, that it finally took hold, spreading beyond localized decimations of a few individuals or single small tribal populations. 4771: 4562: 4341: 4323: 4270: 3375:"Factors associated with siman immunodeficiency virus transmission in a natural African nonhuman primate host in the wild" 2499:"CCR5 as a Coreceptor for Human Immunodeficiency Virus and Simian Immunodeficiency Viruses: A Prototypic Love-Hate Affair" 2236: 2232: 4527: 4213: 4208: 4154: 2329: 2266: 4552: 4219: 4184: 2202: 1857:
Differences in species specificity of SIV and related retroviruses may be partly explained by variants of the protein
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Ahuka-Mundeke S, Ayouba A, Mbala-Kingebeni P, Liegeois F, Esteban A, Lunguya-Metila O, et al. (December 2011).
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The simian (monkey-hosted) immunodeficiency viruses are a species of retrovirus in the Primate group of genus
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Heeney JL, Dalgleish AG, Weiss RA (July 2006). "Origins of HIV and the evolution of resistance to AIDS".
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disease in these primates, despite high levels of circulating virus. Regulation of the activity of the
3923: 3871: 3246: 4848: 4449: 3673: 3599: 3588:"Vaccine protection against acquisition of neutralization-resistant SIV challenges in rhesus monkeys" 3272: 3148: 2935: 2877: 2364: 2218: 1601: 252: 54: 4412: 4395: 4378: 4085: 3573: 2190: 1900:+ssRNA β†’ -ssDNA β†’ dsDNA β†’ +ssRNA (viral genome) β†’ +ssmRNA β†’ viral protein 1731: 1651: 1639: 1570: 4715: 4644: 4627: 4016: 3737:, Vol 8, No 5, May 2002. Contains a picture of the relationship among the various SIV/HIV strains. 3473:
Jasinska AJ, Dong TS, Lagishetty V, Katzka W, Jacobs JP, Schmitt CA, et al. (November 2020).
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coreceptor is one of the natural strategies to avoid disease in some natural host species of SIV.
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appear to avoid simian immunodeficiency virus (SIV) and its effects, though it is not known why.
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Svardal H, Jasinska AJ, Apetrei C, Coppola G, Huang Y, Schmitt CA, et al. (December 2017).
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is another virus that came from simians and into human populations in the mid twentieth century.
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Gifford, RJ; Katzourakis, A; Tristem, M; Pybus, OG; Winters, M; Shafer, RW (23 December 2008).
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Peeters M, Courgnaud V, Abela B, Auzel P, Pourrut X, Bibollet-Ruche F, et al. (May 2002).
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by neutralization-resistant SIV strains could be partially prevented through use of an anti-SIV
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Hansen SG, Piatak M, Ventura AB, Hughes CM, Gilbride RM, Ford JC, et al. (October 2013).
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Letvin NL, Eaton KA, Aldrich WR, Sehgal PK, Blake BJ, Schlossman SF, et al. (May 1983).
2715:"Risk to human health from a plethora of simian immunodeficiency viruses in primate bushmeat" 17: 4930: 4285: 3689: 3681: 3615: 3607: 3545: 3537: 3496: 3486: 3445: 3435: 3394: 3386: 3342: 3332: 3288: 3280: 3261:"Increased mortality and AIDS-like immunopathology in wild chimpanzees infected with SIVcpz" 3219: 3203: 3156: 3111: 3101: 3034: 3026: 2982: 2943: 2895: 2885: 2836: 2826: 2785: 2775: 2762:
Lauck M, Switzer WM, Sibley SD, Hyeroba D, Tumukunde A, Weny G, et al. (October 2013).
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Keele BF, Jones JH, Terio KA, Estes JD, Rudicell RS, Wilson ML, et al. (July 2009).
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Pandrea, Ivona; Sodora, Donald L.; Silvestri, Guido; Apetrei, Cristian (September 2008).
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Ma D, Jasinska AJ, Feyertag F, Wijewardana V, Kristoff J, He T, et al. (May 2014).
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Ma D, Jasinska A, Kristoff J, Grobler JP, Turner T, Jung Y, et al. (January 2013).
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Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences
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Barouch DH, Liu J, Li H, Maxfield LF, Abbink P, Lynch DM, et al. (January 2012).
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multiple times throughout history, but it was not until recently, after the advent of
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primate lineages. That date barely antedates the emergence of the primates 87.7 Ma.
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Kapusinszky B, Mulvaney U, Jasinska AJ, Deng X, Freimer N, Delwart E (August 2015).
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Overview of Primate Lentiviruses and their Evolution in Non-human Primates in Africa
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in humans and non-human primate species. This intracellular protein recognizes the
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Proceedings of the National Academy of Sciences of the United States of America
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Proceedings of the National Academy of Sciences of the United States of America
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of various retroviruses and blocks their reproduction. Other proteins, such as
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Models of Protection Against HIV/SIV: Avoiding AIDS in Humans and Monkeys
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Chimpanzees Do Die From Simian AIDS, Study Finds by Lawrence K. Altman
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Phylogenetic relations between simian immunodeficiency viruses (SIVs)
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high level of virus replication during primary infection (0–180 days)
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that cause persistent infections in at least 45 species of non-human
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of all RNA retroviruses (RNA viruses which use a DNA intermediate).
2866:"Acquired immunodeficiency syndrome in a colony of macaque monkeys" 3787: 2813:
Gilbert, C; Maxfield, DG; Goodman, SM; Feschotte, C (March 2009).
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SIV virion model obtained with cryo-electron microscopy scanning
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In 2012, researchers reported that initial infection of
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The similarities of the two types of virus infections:
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Structural proteins (envelope): SU, TM(gag): MA, CA, NC
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Structure and genome of HIV Β§ Genome organization
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Related viruses also cause disease in other mammals:
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early cytokine production (0–10 days after infection)
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The differences (what happens in nonhuman primates):
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Was in Monkeys for Millennia" 1993:stable level of viral replication (180 days-years) 1673:), SIVgsn/SIVmon/SIVmus 1/SIVmus 2 clade, SIVtal ( 3249:Chimpanzees Do Die from Simian AIDS, Study Finds 2497:Jasinska AJ, Pandrea I, Apetrei C (2022-01-27). 2585: 2583: 2581: 2409:"The evolution of HIV-1 and the origin of AIDS" 218:from three of these primate species, SIVsmm in 4292:Xenotropic murine leukemia virus-related virus 3752:International Committee on Taxonomy of Viruses 2921: 2919: 1968:SIV/HIV infection similarities and differences 3772: 3008: 3006: 2969:King NW, Hunt RD, Letvin NL (December 1983). 8: 2458:"Origin and diversity of human retroviruses" 2193:, transmission from other primates to humans 2177:, the human version of SIV which causes AIDS 1743:and not suffer any harm from the infection. 2596:Cold Spring Harbor Perspectives in Medicine 2323: 2321: 1979:high level of CD4+ T-cell loss (0–180 days) 4783: 4503: 4492: 4373: 4140: 4129: 4063: 4011: 3976: 3965: 3954: 3824: 3813: 3779: 3765: 3757: 2328:McNeil Donald G. Jr (September 16, 2010). 1982:restricted role of humoral immune response 207:, which was isolated from the mainland by 40: 29: 3693: 3619: 3549: 3500: 3490: 3449: 3439: 3398: 3346: 3336: 3292: 3223: 3115: 3105: 3063:"HIV precursor in monkeys ancient: study" 3038: 3013:Sharp PM, Shaw GM, Hahn BH (April 2005). 2986: 2899: 2889: 2840: 2830: 2789: 2779: 2738: 2688:Pancino G, Silvestri G, Fowke KR (2012). 2664: 2615: 2532: 2514: 2473: 2432: 2008:establishment of anti-inflammatory milieu 2456:Peeters M, D'Arc M, Delaporte E (2014). 2265:Peeters M, Courgnaud V, Abela B (2001). 2181:Positive-sense single-stranded RNA virus 2016: 1700:), SIVkcol 2, SIVblc (formerly SIVbcm) ( 2257: 2592:"Origins of HIV and the AIDS pandemic" 1848:Accessory proteins: Nef, Vpr, Vpx, Vif 3368: 3366: 3314: 3312: 2201:Other simian exogenous retroviruses: 2183:, a classification which includes SIV 2005:high level of functional immune cells 1738:for at least 32,000 years. Based on 7: 4348:Caprine arthritis encephalitis virus 2590:Sharp PM, Hahn BH (September 2011). 4767:Human teratocarcinoma-derived virus 4246:Walleye epidermal hyperplasia virus 3720:"HIV origin 'found in wild chimps'" 3069:from the original on March 25, 2013 1454: 1446: 1411: 1348: 1326: 1159: 1151: 1143: 1122: 1100: 1092: 1084: 1076: 1068: 1060: 988: 943: 935: 844: 836: 828: 821: 730: 722: 714: 598: 590: 582: 519: 474: 466: 373: 365: 357: 349: 341: 334: 327: 3991:Caenorhabditis elegans Cer13 virus 3637:Simeon Bennett (January 4, 2012). 1774:positive-sense single-stranded RNA 1557:distinct groups and one subgroup: 25: 4043:Caenorhabditis elegans Cer1 virus 2975:The American Journal of Pathology 2574:ICTV database entry: 61.0.6.5.003 2407:Sharp PM, Hahn BH (August 2010). 2002:normal level of immune activation 4314:(human immunodeficiency viruses) 2197:List of zoonotic primate viruses 58: 4318:Simian immunodeficiency viruses 3913:Woolly monkey hepatitis B virus 3898:Ground squirrel hepatitis virus 3065:. CBC News. 17 September 2010. 3031:10.1128/JVI.79.7.3891-3902.2005 4688:Soybean chlorotic mottle virus 4336:Equine infectious anemia virus 1: 4827:Simian immunodeficiency virus 4797:Simian immunodeficiency virus 4772:Human Endogenous Retrovirus-W 4563:Strawberry vein banding virus 4342:Bovine immunodeficiency virus 4324:Feline immunodeficiency virus 4271:Abelson murine leukemia virus 2157:vaccine obligately including 710: grp iii/agm  285:along with the human viruses 182:Simian immunodeficiency virus 171:Simian immunodeficiency virus 34:Simian immunodeficiency virus 18:Simian Immunodeficiency Virus 4528:Kalanchoe top-spotting virus 4155:Avian sarcoma leukosis virus 3735:Emerging Infectious Diseases 3338:10.1371/journal.ppat.1003011 2832:10.1371/journal.pgen.1000425 2719:Emerging Infectious Diseases 2645:Emerging Infectious Diseases 1990:lower level of CCR5+ T-cells 298:, which together with genus 4553:Carnation etched ring virus 4220:Simian-T-lymphotropic virus 4185:Jaagsiekte sheep retrovirus 2608:10.1101/cshperspect.a006841 2203:simian-T-lymphotropic virus 1996:restoration of CD4+ T-cells 1611:): SIVsab, SIVver, SIVgri ( 232:crossed the species barrier 4947: 4205:Human T-lymphotropic virus 3492:10.1186/s40168-020-00928-4 2130:University of Pennsylvania 1793: 1728:greater spot-nosed monkeys 1139: (grp vi)  234:into humans, resulting in 4583:Cassava vein mosaic virus 4523:Cacao swollen shoot virus 4180:Mouse mammary tumor virus 3908:Woodchuck hepatitis virus 3574:HIV-1 related information 2516:10.3389/fimmu.2022.835994 2211:gibbon-ape leukemia virus 1955:About 100,000 cells from 1845:Gene regulators: Tat, Rev 1497: 1474: 1460: 1452: 1444: 1430: 1417: 1409: 1368: 1354: 1346: 1332: 1324: 1301: 1279: 1265: 1224: 1202: 1179: 1165: 1157: 1149: 1141: 1127: 1120: 1106: 1098: 1090: 1082: 1074: 1066: 1058: 1008: 994: 986: 963: 949: 941: 933: 910: 887: 864: 850: 842: 834: 826: 819: 796: 773: 750: 736: 728: 720: 712: 680: 657: 643: 620: 604: 596: 588: 580: 539: 525: 517: 494: 480: 472: 464: 441: 418: 395: 379: 371: 363: 355: 347: 339: 332: 53: 48: 39: 32: 4558:Cauliflower mosaic virus 3208:10.1016/j.it.2008.05.004 2781:10.1186/1742-4690-10-107 1689:), SIVblu (blue monkey) 817: grp iv  578: grp ii  3844:Heron hepatitis B virus 3161:10.1126/science.1123016 3107:10.1073/pnas.0807873105 2948:10.1126/science.3159089 2692:. Elsevier. p. 6. 2503:Frontiers in Immunology 2377:10.1126/science.1193550 1698:black-and-white colobus 1056: grp v  345: grp i  230:, are believed to have 4533:Rubus yellow net virus 4518:Banana streak MY virus 3839:Duck hepatitis B virus 2891:10.1073/pnas.80.9.2718 2731:10.3201/eid0805.010522 2657:10.3201/eid1712.110783 2557:"Taxon Details | ICTV" 2425:10.1098/rstb.2010.0031 1960: 242:respectively, the two 4926:Animal viral diseases 4281:Feline leukemia virus 4266:Murine leukemia virus 4226:Bovine leukemia virus 1954: 1894:reverse transcription 1794:Further information: 1609:African green monkeys 253:modern transportation 27:Species of retrovirus 3792:Reverse transcribing 3441:10.1128/jvi.00671-15 3391:10.1128/JVI.03606-13 3196:Trends in Immunology 2219:simian sarcoma virus 1764:Structure and genome 1732:red-capped mangabeys 1602:stump-tailed macaque 55:Virus classification 3855:Herpetohepadnavirus 3686:10.1038/nature12519 3678:2013Natur.502..100H 3612:10.1038/nature10766 3604:2012Natur.482...89B 3428:Journal of Virology 3379:Journal of Virology 3285:10.1038/nature08200 3277:2009Natur.460..515K 3153:2006Sci...313..462H 3019:Journal of Virology 2940:1985Sci...228.1201D 2934:(4704): 1201–1204. 2882:1983PNAS...80.2718L 2419:(1552): 2487–2494. 2369:2010Sci...329.1487W 1842:Enzymes: RT, PR, IN 1652:Tshuapa red colobus 1640:western red colobus 1588:ii) HIV-2, SIVsmm ( 1571:red-capped mangabey 4459:Simian foamy virus 4433:Prosimiispumavirus 4422:Feline foamy virus 4160:Rous sarcoma virus 3748:Description of SIV 2215:simian foamy virus 2161:protein antigens. 1961: 1671:Wolf's mona monkey 1667:Dent's mona monkey 1663:De Brazza's monkey 1648:Kibale red colobus 1598:pig-tailed macaque 1561:i) HIV-1, SIVcpz ( 257:global commuterism 191:) is a species of 4903: 4902: 4789:Taxon identifiers 4780: 4779: 4738: 4737: 4734: 4733: 4730: 4729: 4480: 4479: 4476: 4475: 4472: 4471: 4464:Human foamy virus 4368:Spumaretrovirinae 4361: 4360: 4353:Visna-maedi virus 4237:Epsilonretrovirus 4135:Orthoretrovirinae 4117: 4116: 4051: 4050: 3999: 3998: 3942: 3941: 3938: 3937: 3903:Hepatitis B virus 3889:Orthohepadnavirus 3672:(7469): 100–104. 3536:(12): 1705–1713. 3434:(16): 8152–8161. 3385:(10): 5687–5705. 3271:(7254): 515–519. 3147:(5786): 462–466. 2699:978-0-12-387715-4 2651:(12): 2277–2286. 2207:simian retrovirus 2123: 2122: 1915:protein synthesis 1679:red-tailed guenon 1675:northern talapoin 1632:sun-tailed monkey 1554: 1553: 1544: 1543: 1535: 1534: 1526: 1525: 1517: 1516: 1508: 1507: 1485: 1484: 1397: 1396: 1388: 1387: 1379: 1378: 1312: 1311: 1290: 1289: 1253: 1252: 1244: 1243: 1235: 1234: 1213: 1212: 1190: 1189: 1046: 1045: 1037: 1036: 1028: 1027: 1019: 1018: 974: 973: 921: 920: 898: 897: 875: 874: 807: 806: 784: 783: 761: 760: 700: 699: 691: 690: 668: 667: 631: 630: 568: 567: 559: 558: 550: 549: 505: 504: 452: 451: 429: 428: 406: 405: 296:orthoretrovirinae 209:rising sea levels 178: 177: 16:(Redirected from 4938: 4921:Primate diseases 4896: 4895: 4883: 4882: 4870: 4869: 4857: 4856: 4844: 4843: 4831: 4830: 4829: 4816: 4815: 4814: 4784: 4504: 4493: 4487:dsDNA-RT viruses 4374: 4286:Koala retrovirus 4141: 4130: 4064: 4012: 3977: 3966: 3960:ssRNA-RT viruses 3955: 3924:Parahepadnavirus 3872:Metahepadnavirus 3825: 3814: 3781: 3774: 3767: 3758: 3722:BBC News article 3708: 3707: 3697: 3657: 3651: 3648: 3642: 3633: 3623: 3583: 3577: 3570: 3564: 3563: 3553: 3521: 3515: 3514: 3504: 3494: 3470: 3464: 3463: 3453: 3443: 3419: 3413: 3412: 3402: 3370: 3361: 3360: 3350: 3340: 3316: 3307: 3306: 3296: 3256: 3250: 3244: 3238: 3237: 3227: 3187: 3181: 3180: 3136: 3130: 3129: 3119: 3109: 3085: 3079: 3078: 3076: 3074: 3059: 3053: 3052: 3042: 3025:(7): 3891–3902. 3010: 3001: 3000: 2990: 2966: 2960: 2959: 2923: 2914: 2913: 2903: 2893: 2876:(9): 2718–2722. 2861: 2855: 2854: 2844: 2834: 2810: 2804: 2803: 2793: 2783: 2759: 2753: 2752: 2742: 2710: 2704: 2703: 2685: 2679: 2678: 2668: 2636: 2630: 2629: 2619: 2587: 2576: 2571: 2565: 2564: 2553: 2547: 2546: 2536: 2518: 2494: 2488: 2487: 2477: 2453: 2447: 2446: 2436: 2404: 2398: 2396: 2352: 2346: 2345: 2343: 2342: 2325: 2316: 2315: 2313: 2312: 2306: 2295: 2289: 2288: 2286: 2285: 2271: 2262: 2145:Vaccine research 2017: 1687:red-eared guenon 1628:L'hoest's monkey 1455: 1447: 1412: 1349: 1327: 1160: 1152: 1144: 1123: 1101: 1093: 1085: 1077: 1069: 1061: 989: 944: 936: 845: 837: 829: 822: 731: 723: 715: 599: 591: 583: 520: 475: 467: 374: 366: 358: 350: 342: 335: 328: 323: 322: 63: 62: 44: 30: 21: 4946: 4945: 4941: 4940: 4939: 4937: 4936: 4935: 4906: 4905: 4904: 4899: 4891: 4886: 4878: 4873: 4865: 4860: 4852: 4847: 4839: 4834: 4825: 4824: 4819: 4810: 4809: 4804: 4791: 4781: 4776: 4726: 4709: 4692: 4672: 4655: 4638: 4621: 4604: 4587: 4567: 4537: 4468: 4450:Simiispumavirus 4443: 4426: 4406: 4389: 4357: 4330:Puma lentivirus 4296: 4257:Gammaretrovirus 4250: 4230: 4196:Deltaretrovirus 4189: 4164: 4146:Alpharetrovirus 4113: 4096: 4079: 4047: 4027: 3995: 3934: 3917: 3882: 3865: 3848: 3830:Avihepadnavirus 3801: 3797:Revtraviricetes 3785: 3744: 3716: 3714:Further reading 3711: 3659: 3658: 3654: 3636: 3598:(7383): 89–93. 3585: 3584: 3580: 3571: 3567: 3542:10.1038/ng.3980 3530:Nature Genetics 3523: 3522: 3518: 3472: 3471: 3467: 3421: 3420: 3416: 3372: 3371: 3364: 3331:(1): e1003011. 3318: 3317: 3310: 3258: 3257: 3253: 3245: 3241: 3189: 3188: 3184: 3138: 3137: 3133: 3100:(51): 20362–7. 3087: 3086: 3082: 3072: 3070: 3061: 3060: 3056: 3012: 3011: 3004: 2968: 2967: 2963: 2925: 2924: 2917: 2863: 2862: 2858: 2825:(3): e1000425. 2812: 2811: 2807: 2761: 2760: 2756: 2712: 2711: 2707: 2700: 2687: 2686: 2682: 2638: 2637: 2633: 2589: 2588: 2579: 2572: 2568: 2555: 2554: 2550: 2496: 2495: 2491: 2455: 2454: 2450: 2406: 2405: 2401: 2354: 2353: 2349: 2340: 2338: 2327: 2326: 2319: 2310: 2308: 2304: 2297: 2296: 2292: 2283: 2281: 2269: 2264: 2263: 2259: 2255: 2171: 2156: 2147: 2114:Sooty mangabey 2084:P. Troglodytes 2015: 1970: 1957:rhesus macaques 1949: 1935: 1901: 1879: 1855: 1798: 1792: 1782: 1766: 1761: 1740:molecular clock 1720:rhesus macaques 1716: 1694:colobus guereza 1636:Preuss's guenon 1617:tantalus monkey 1545: 1536: 1527: 1518: 1509: 1486: 1398: 1389: 1380: 1313: 1291: 1254: 1245: 1236: 1214: 1191: 1047: 1038: 1029: 1020: 975: 922: 899: 876: 808: 785: 762: 701: 692: 669: 632: 569: 560: 551: 506: 453: 430: 407: 321: 277: 220:sooty mangabeys 174: 122:Revtraviricetes 57: 28: 23: 22: 15: 12: 11: 5: 4944: 4942: 4934: 4933: 4928: 4923: 4918: 4908: 4907: 4901: 4900: 4898: 4897: 4884: 4871: 4858: 4845: 4832: 4817: 4801: 4799: 4793: 4792: 4787: 4778: 4777: 4775: 4774: 4769: 4764: 4759: 4754: 4748: 4746: 4740: 4739: 4736: 4735: 4732: 4731: 4728: 4727: 4725: 4724: 4721: 4719: 4711: 4710: 4708: 4707: 4704: 4702: 4694: 4693: 4691: 4690: 4684: 4682: 4674: 4673: 4671: 4670: 4667: 4665: 4657: 4656: 4654: 4653: 4650: 4648: 4640: 4639: 4637: 4636: 4633: 4631: 4623: 4622: 4620: 4619: 4616: 4614: 4606: 4605: 4603: 4602: 4599: 4597: 4589: 4588: 4586: 4585: 4579: 4577: 4569: 4568: 4566: 4565: 4560: 4555: 4549: 4547: 4539: 4538: 4536: 4535: 4530: 4525: 4520: 4514: 4512: 4501: 4498:Caulimoviridae 4490: 4482: 4481: 4478: 4477: 4474: 4473: 4470: 4469: 4467: 4466: 4461: 4455: 4453: 4445: 4444: 4442: 4441: 4438: 4436: 4428: 4427: 4425: 4424: 4418: 4416: 4413:Felispumavirus 4408: 4407: 4405: 4404: 4401: 4399: 4396:Equispumavirus 4391: 4390: 4388: 4387: 4384: 4382: 4379:Bovispumavirus 4371: 4363: 4362: 4359: 4358: 4356: 4355: 4350: 4345: 4339: 4333: 4327: 4321: 4315: 4308: 4306: 4298: 4297: 4295: 4294: 4289: 4283: 4278: 4273: 4268: 4262: 4260: 4252: 4251: 4249: 4248: 4242: 4240: 4232: 4231: 4229: 4228: 4223: 4217: 4211: 4201: 4199: 4191: 4190: 4188: 4187: 4182: 4176: 4174: 4171:Betaretrovirus 4166: 4165: 4163: 4162: 4157: 4151: 4149: 4138: 4127: 4119: 4118: 4115: 4114: 4112: 4111: 4108: 4106: 4098: 4097: 4095: 4094: 4091: 4089: 4081: 4080: 4078: 4077: 4074: 4072: 4061: 4053: 4052: 4049: 4048: 4046: 4045: 4039: 4037: 4029: 4028: 4026: 4025: 4022: 4020: 4009: 4001: 4000: 3997: 3996: 3994: 3993: 3987: 3985: 3974: 3963: 3952: 3944: 3943: 3940: 3939: 3936: 3935: 3933: 3932: 3929: 3927: 3919: 3918: 3916: 3915: 3910: 3905: 3900: 3894: 3892: 3884: 3883: 3881: 3880: 3877: 3875: 3867: 3866: 3864: 3863: 3860: 3858: 3850: 3849: 3847: 3846: 3841: 3835: 3833: 3822: 3819:Hepadnaviridae 3811: 3803: 3802: 3786: 3784: 3783: 3776: 3769: 3761: 3755: 3754: 3743: 3742:External links 3740: 3739: 3738: 3723: 3715: 3712: 3710: 3709: 3652: 3650: 3649: 3578: 3565: 3516: 3465: 3414: 3362: 3325:PLOS Pathogens 3308: 3251: 3239: 3202:(9): 419–428. 3182: 3131: 3080: 3054: 3002: 2981:(3): 382–388. 2961: 2915: 2856: 2805: 2754: 2725:(5): 451–457. 2705: 2698: 2680: 2631: 2602:(1): a006841. 2577: 2566: 2548: 2489: 2448: 2399: 2363:(5998): 1487. 2347: 2335:New York Times 2317: 2290: 2256: 2254: 2251: 2250: 2249: 2243: 2221: 2199: 2194: 2191:Origin of AIDS 2184: 2178: 2170: 2167: 2154: 2151:rhesus monkeys 2146: 2143: 2121: 2120: 2117: 2115: 2112: 2110: 2106: 2105: 2102: 2099: 2096: 2093: 2089: 2088: 2085: 2082: 2079: 2078:SIVrcm/SIVgsn 2076: 2072: 2071: 2066: 2063: 2060: 2057: 2053: 2052: 2047: 2044: 2041: 2038: 2034: 2033: 2030: 2027: 2024: 2021: 2014: 2011: 2010: 2009: 2006: 2003: 2000: 1997: 1994: 1991: 1984: 1983: 1980: 1977: 1969: 1966: 1948: 1945: 1934: 1931: 1930: 1929: 1926: 1922: 1921: 1920: 1919: 1916: 1913: 1910: 1907: 1899: 1898: 1897: 1896: 1895: 1889: 1886: 1883: 1878: 1875: 1854: 1851: 1850: 1849: 1846: 1843: 1840: 1837: 1791: 1788: 1787: 1786: 1785:coding regions 1781: 1778: 1765: 1762: 1760: 1757: 1730:) and SIVrcm ( 1715: 1712: 1708: 1707: 1706: 1705: 1696:), SIVkcol 1 ( 1683:black mangabey 1655: 1622:iv) SIVmnd 1 ( 1620: 1605: 1594:rhesus macaque 1590:sooty mangabey 1586: 1575:agile mangabey 1552: 1551: 1547: 1546: 1542: 1541: 1538: 1537: 1533: 1532: 1529: 1528: 1524: 1523: 1520: 1519: 1515: 1514: 1511: 1510: 1506: 1505: 1502: 1501: 1496: 1492: 1491: 1488: 1487: 1483: 1482: 1479: 1478: 1473: 1469: 1468: 1465: 1464: 1459: 1453: 1451: 1445: 1443: 1439: 1438: 1435: 1434: 1429: 1426: 1425: 1422: 1421: 1416: 1410: 1408: 1404: 1403: 1400: 1399: 1395: 1394: 1391: 1390: 1386: 1385: 1382: 1381: 1377: 1376: 1373: 1372: 1367: 1363: 1362: 1359: 1358: 1353: 1347: 1345: 1341: 1340: 1337: 1336: 1331: 1325: 1323: 1319: 1318: 1315: 1314: 1310: 1309: 1306: 1305: 1300: 1297: 1296: 1293: 1292: 1288: 1287: 1284: 1283: 1278: 1274: 1273: 1270: 1269: 1264: 1260: 1259: 1256: 1255: 1251: 1250: 1247: 1246: 1242: 1241: 1238: 1237: 1233: 1232: 1229: 1228: 1223: 1220: 1219: 1216: 1215: 1211: 1210: 1207: 1206: 1201: 1197: 1196: 1193: 1192: 1188: 1187: 1184: 1183: 1178: 1174: 1173: 1170: 1169: 1164: 1158: 1156: 1150: 1148: 1142: 1140: 1136: 1135: 1132: 1131: 1126: 1121: 1119: 1115: 1114: 1111: 1110: 1105: 1099: 1097: 1091: 1089: 1083: 1081: 1075: 1073: 1067: 1065: 1059: 1057: 1053: 1052: 1049: 1048: 1044: 1043: 1040: 1039: 1035: 1034: 1031: 1030: 1026: 1025: 1022: 1021: 1017: 1016: 1013: 1012: 1007: 1003: 1002: 999: 998: 993: 987: 985: 981: 980: 977: 976: 972: 971: 968: 967: 962: 958: 957: 954: 953: 948: 942: 940: 934: 932: 928: 927: 924: 923: 919: 918: 915: 914: 909: 905: 904: 901: 900: 896: 895: 892: 891: 886: 882: 881: 878: 877: 873: 872: 869: 868: 863: 859: 858: 855: 854: 849: 843: 841: 835: 833: 827: 825: 820: 818: 814: 813: 810: 809: 805: 804: 801: 800: 795: 791: 790: 787: 786: 782: 781: 778: 777: 772: 768: 767: 764: 763: 759: 758: 755: 754: 749: 745: 744: 741: 740: 735: 729: 727: 721: 719: 713: 711: 707: 706: 703: 702: 698: 697: 694: 693: 689: 688: 685: 684: 679: 675: 674: 671: 670: 666: 665: 662: 661: 656: 652: 651: 648: 647: 642: 638: 637: 634: 633: 629: 628: 625: 624: 619: 615: 614: 611: 610: 603: 597: 595: 589: 587: 581: 579: 575: 574: 571: 570: 566: 565: 562: 561: 557: 556: 553: 552: 548: 547: 544: 543: 538: 534: 533: 530: 529: 524: 518: 516: 512: 511: 508: 507: 503: 502: 499: 498: 493: 489: 488: 485: 484: 479: 473: 471: 465: 463: 459: 458: 455: 454: 450: 449: 446: 445: 440: 436: 435: 432: 431: 427: 426: 423: 422: 417: 413: 412: 409: 408: 404: 403: 400: 399: 394: 390: 389: 386: 385: 378: 372: 370: 364: 362: 356: 354: 348: 346: 340: 338: 333: 331: 326: 320: 317: 276: 273: 226:and SIVcpz in 176: 175: 168: 166: 162: 161: 154: 150: 149: 142: 138: 137: 130: 126: 125: 118: 114: 113: 110:Artverviricota 106: 102: 101: 94: 90: 89: 82: 75: 74: 69: 65: 64: 51: 50: 46: 45: 37: 36: 26: 24: 14: 13: 10: 9: 6: 4: 3: 2: 4943: 4932: 4929: 4927: 4924: 4922: 4919: 4917: 4914: 4913: 4911: 4894: 4889: 4885: 4881: 4876: 4872: 4868: 4863: 4859: 4855: 4850: 4846: 4842: 4837: 4833: 4828: 4822: 4818: 4813: 4807: 4803: 4802: 4800: 4798: 4794: 4790: 4785: 4773: 4770: 4768: 4765: 4763: 4760: 4758: 4755: 4753: 4750: 4749: 4747: 4745: 4741: 4723: 4722: 4720: 4718: 4717: 4712: 4706: 4705: 4703: 4701: 4700: 4695: 4689: 4686: 4685: 4683: 4681: 4680: 4675: 4669: 4668: 4666: 4664: 4663: 4658: 4652: 4651: 4649: 4647: 4646: 4641: 4635: 4634: 4632: 4630: 4629: 4624: 4618: 4617: 4615: 4613: 4612: 4607: 4601: 4600: 4598: 4596: 4595: 4590: 4584: 4581: 4580: 4578: 4576: 4575: 4570: 4564: 4561: 4559: 4556: 4554: 4551: 4550: 4548: 4546: 4545: 4540: 4534: 4531: 4529: 4526: 4524: 4521: 4519: 4516: 4515: 4513: 4511: 4510: 4505: 4502: 4500: 4499: 4494: 4491: 4488: 4483: 4465: 4462: 4460: 4457: 4456: 4454: 4452: 4451: 4446: 4440: 4439: 4437: 4435: 4434: 4429: 4423: 4420: 4419: 4417: 4415: 4414: 4409: 4403: 4402: 4400: 4398: 4397: 4392: 4386: 4385: 4383: 4381: 4380: 4375: 4372: 4370: 4369: 4364: 4354: 4351: 4349: 4346: 4343: 4340: 4337: 4334: 4331: 4328: 4325: 4322: 4319: 4316: 4313: 4310: 4309: 4307: 4305: 4304: 4299: 4293: 4290: 4287: 4284: 4282: 4279: 4277: 4274: 4272: 4269: 4267: 4264: 4263: 4261: 4259: 4258: 4253: 4247: 4244: 4243: 4241: 4239: 4238: 4233: 4227: 4224: 4221: 4218: 4215: 4212: 4210: 4206: 4203: 4202: 4200: 4198: 4197: 4192: 4186: 4183: 4181: 4178: 4177: 4175: 4173: 4172: 4167: 4161: 4158: 4156: 4153: 4152: 4150: 4148: 4147: 4142: 4139: 4137: 4136: 4131: 4128: 4126: 4125: 4120: 4110: 4109: 4107: 4105: 4104: 4099: 4093: 4092: 4090: 4088: 4087: 4082: 4076: 4075: 4073: 4071: 4070: 4065: 4062: 4060: 4059: 4058:Pseudoviridae 4054: 4044: 4041: 4040: 4038: 4036: 4035: 4030: 4024: 4023: 4021: 4019: 4018: 4013: 4010: 4008: 4007: 4002: 3992: 3989: 3988: 3986: 3984: 3983: 3978: 3975: 3973: 3972: 3971:Belpaoviridae 3967: 3964: 3961: 3956: 3953: 3951: 3950: 3945: 3931: 3930: 3928: 3926: 3925: 3920: 3914: 3911: 3909: 3906: 3904: 3901: 3899: 3896: 3895: 3893: 3891: 3890: 3885: 3879: 3878: 3876: 3874: 3873: 3868: 3862: 3861: 3859: 3857: 3856: 3851: 3845: 3842: 3840: 3837: 3836: 3834: 3832: 3831: 3826: 3823: 3821: 3820: 3815: 3812: 3810: 3809: 3808:Blubervirales 3804: 3799: 3798: 3793: 3789: 3782: 3777: 3775: 3770: 3768: 3763: 3762: 3759: 3753: 3749: 3746: 3745: 3741: 3736: 3732: 3728: 3724: 3721: 3718: 3717: 3713: 3705: 3701: 3696: 3691: 3687: 3683: 3679: 3675: 3671: 3667: 3663: 3656: 3653: 3646: 3641: 3635: 3634: 3631: 3627: 3622: 3617: 3613: 3609: 3605: 3601: 3597: 3593: 3589: 3582: 3579: 3575: 3569: 3566: 3561: 3557: 3552: 3547: 3543: 3539: 3535: 3531: 3527: 3520: 3517: 3512: 3508: 3503: 3498: 3493: 3488: 3484: 3480: 3476: 3469: 3466: 3461: 3457: 3452: 3447: 3442: 3437: 3433: 3429: 3425: 3418: 3415: 3410: 3406: 3401: 3396: 3392: 3388: 3384: 3380: 3376: 3369: 3367: 3363: 3358: 3354: 3349: 3344: 3339: 3334: 3330: 3326: 3322: 3315: 3313: 3309: 3304: 3300: 3295: 3290: 3286: 3282: 3278: 3274: 3270: 3266: 3262: 3255: 3252: 3248: 3243: 3240: 3235: 3231: 3226: 3221: 3217: 3213: 3209: 3205: 3201: 3197: 3193: 3186: 3183: 3178: 3174: 3170: 3166: 3162: 3158: 3154: 3150: 3146: 3142: 3135: 3132: 3127: 3123: 3118: 3113: 3108: 3103: 3099: 3095: 3091: 3084: 3081: 3068: 3064: 3058: 3055: 3050: 3046: 3041: 3036: 3032: 3028: 3024: 3020: 3016: 3009: 3007: 3003: 2998: 2994: 2989: 2984: 2980: 2976: 2972: 2965: 2962: 2957: 2953: 2949: 2945: 2941: 2937: 2933: 2929: 2922: 2920: 2916: 2911: 2907: 2902: 2897: 2892: 2887: 2883: 2879: 2875: 2871: 2867: 2860: 2857: 2852: 2848: 2843: 2838: 2833: 2828: 2824: 2820: 2819:PLOS Genetics 2816: 2809: 2806: 2801: 2797: 2792: 2787: 2782: 2777: 2773: 2769: 2768:Retrovirology 2765: 2758: 2755: 2750: 2746: 2741: 2736: 2732: 2728: 2724: 2720: 2716: 2709: 2706: 2701: 2695: 2691: 2684: 2681: 2676: 2672: 2667: 2662: 2658: 2654: 2650: 2646: 2642: 2635: 2632: 2627: 2623: 2618: 2613: 2609: 2605: 2601: 2597: 2593: 2586: 2584: 2582: 2578: 2575: 2570: 2567: 2562: 2558: 2552: 2549: 2544: 2540: 2535: 2530: 2526: 2522: 2517: 2512: 2508: 2504: 2500: 2493: 2490: 2485: 2481: 2476: 2471: 2467: 2463: 2459: 2452: 2449: 2444: 2440: 2435: 2430: 2426: 2422: 2418: 2414: 2410: 2403: 2400: 2394: 2390: 2386: 2382: 2378: 2374: 2370: 2366: 2362: 2358: 2351: 2348: 2337: 2336: 2331: 2324: 2322: 2318: 2303: 2302: 2294: 2291: 2279: 2275: 2268: 2261: 2258: 2252: 2247: 2244: 2242: 2238: 2234: 2230: 2226: 2222: 2220: 2216: 2212: 2208: 2204: 2200: 2198: 2195: 2192: 2188: 2185: 2182: 2179: 2176: 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1641: 1637: 1633: 1629: 1625: 1621: 1618: 1614: 1613:grivet monkey 1610: 1607:iii) SIVagm ( 1606: 1603: 1599: 1595: 1591: 1587: 1584: 1580: 1577:), SIVmnd 2 ( 1576: 1572: 1568: 1564: 1560: 1559: 1558: 1549: 1548: 1540: 1539: 1531: 1530: 1522: 1521: 1513: 1512: 1504: 1503: 1500: 1494: 1493: 1490: 1489: 1481: 1480: 1477: 1471: 1470: 1467: 1466: 1463: 1457: 1456: 1449: 1448: 1441: 1440: 1437: 1436: 1433: 1428: 1427: 1424: 1423: 1420: 1414: 1413: 1406: 1405: 1402: 1401: 1393: 1392: 1384: 1383: 1375: 1374: 1371: 1365: 1364: 1361: 1360: 1357: 1351: 1350: 1343: 1342: 1339: 1338: 1335: 1329: 1328: 1321: 1320: 1317: 1316: 1308: 1307: 1304: 1299: 1298: 1295: 1294: 1286: 1285: 1282: 1276: 1275: 1272: 1271: 1268: 1262: 1261: 1258: 1257: 1249: 1248: 1240: 1239: 1231: 1230: 1227: 1222: 1221: 1218: 1217: 1209: 1208: 1205: 1199: 1198: 1195: 1194: 1186: 1185: 1182: 1176: 1175: 1172: 1171: 1168: 1162: 1161: 1154: 1153: 1146: 1145: 1138: 1137: 1134: 1133: 1130: 1125: 1124: 1117: 1116: 1113: 1112: 1109: 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3969: 3949:Ortervirales 3947: 3922: 3887: 3870: 3853: 3828: 3817: 3806: 3795: 3734: 3726: 3669: 3665: 3655: 3644: 3595: 3591: 3581: 3568: 3533: 3529: 3519: 3482: 3478: 3468: 3431: 3427: 3417: 3382: 3378: 3328: 3324: 3268: 3264: 3254: 3242: 3199: 3195: 3185: 3144: 3140: 3134: 3097: 3093: 3083: 3073:17 September 3071:. 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Retrieved 2277: 2274:AIDS Reviews 2273: 2260: 2163: 2148: 2139: 2124: 2013:Epidemiology 1985: 1971: 1962: 1947:Pathogenesis 1940:quasispecies 1938: 1936: 1933:Quasispecies 1891:Replication 1856: 1834: 1830: 1826: 1822: 1818: 1814: 1810: 1806: 1802: 1767: 1745: 1725: 1717: 1709: 1692:vi) SIVcol ( 1583:drill monkey 1555: 1498: 1475: 1461: 1431: 1418: 1369: 1355: 1333: 1302: 1280: 1266: 1225: 1203: 1180: 1166: 1128: 1107: 1009: 995: 964: 950: 911: 888: 865: 851: 797: 774: 751: 737: 681: 658: 644: 621: 606: 605: 540: 526: 495: 481: 442: 419: 396: 381: 380: 310: 306:retroviridae 304:form family 299: 280: 278: 269: 261: 222:, SIVgor in 213: 205:Bioko Island 187: 186: 181: 180: 179: 170: 169: 157: 146:Retroviridae 145: 134:Ortervirales 133: 121: 109: 98:Pararnavirae 97: 85: 78: 68:(unranked): 33: 4821:Wikispecies 4699:Tungrovirus 4594:Dioscovirus 4574:Cavemovirus 4222:(types 1-4) 4086:Pseudovirus 4006:Metaviridae 3982:Semotivirus 2561:ictv.global 2101:G. gorilla 2081:Chimpanzee 2065:H. sapiens 2046:H. sapiens 1906:integration 1885:Penetration 1877:Replication 1753:monkey-like 1685:), SIVreg ( 1681:), SIVbkm ( 1677:), SIVasc ( 1669:), SIVwol ( 1665:), SIVden ( 1661:), SIVdeb ( 1657:v) SIVsyk ( 1650:), SIVtrc ( 1646:), SIVkrc ( 1642:), SIVolc ( 1638:), SIVwrc ( 1634:), SIVprg ( 1630:), SIVsun ( 1626:), SIVlho ( 1615:), SIVtan ( 1600:), SIVstm ( 1596:), SIVmne ( 1592:), SIVmac ( 1581:), SIVdrl ( 1573:), SIVagi ( 1569:), SIVrcm ( 1565:), SIVgor ( 228:chimpanzees 4910:Categories 4744:Endogenous 4679:Soymovirus 4509:Badnavirus 4303:Lentivirus 3485:(1): 154. 3479:Microbiome 2509:: 835994. 2341:2010-09-17 2311:2010-09-19 2284:2020-07-11 2253:References 1928:Maturation 1882:Attachment 1749:lemur-like 1563:chimpanzee 301:Spumavirus 282:Lentivirus 193:retrovirus 158:Lentivirus 4611:Petuvirus 4103:Sirevirus 4069:Hemivirus 4034:Metavirus 3794:viruses ( 3645:Bloomberg 3216:1471-4906 2525:1664-3224 1888:Uncoating 1776:genomes. 165:Species: 93:Kingdom: 86:Riboviria 4880:11460794 4867:10617606 4812:Q1890246 4806:Wikidata 3725:Peeters 3704:24025770 3630:22217938 3560:29083404 3511:33158452 3460:26018153 3409:24623416 3357:23349627 3303:19626114 3234:18676179 3177:27673160 3169:16873637 3126:19075221 3067:Archived 3049:15767392 2851:19300488 2800:24139306 2749:11996677 2675:22172157 2626:22229120 2543:35154162 2484:24584106 2443:20643738 2393:37803712 2385:20847261 2209:type D, 2187:Zoonosis 2169:See also 2098:Gorilla 2032:disease 2029:binomial 1918:Assembly 1912:cleavage 1867:APOBEC3G 1790:Proteome 1772:pair of 1759:Virology 1624:mandrill 1579:mandrill 275:Taxonomy 248:bushmeat 224:gorillas 197:primates 141:Family: 105:Phylum: 4931:Simians 4216:, 3, 4) 3695:3849456 3674:Bibcode 3621:3271177 3600:Bibcode 3551:5709169 3502:7648414 3451:4524239 3400:4019088 3348:3547836 3294:2872475 3273:Bibcode 3225:2840226 3149:Bibcode 3141:Science 3117:2603253 3040:1061584 2997:6316791 2988:1916356 2956:3159089 2936:Bibcode 2928:Science 2910:6221343 2878:Bibcode 2842:2651035 2791:4016034 2774:: 107. 2740:2732488 2666:3311211 2617:3234451 2534:8829453 2475:4289907 2434:2935100 2365:Bibcode 2357:Science 2135:Bonobos 2128:of the 2109:SIVsmm 2095:SIVcpz 2092:SIVgor 2075:SIVcpz 2062:humans 2059:SIVsmm 2043:humans 2040:SIVcpz 2023:lineage 1925:Budding 1909:latency 1853:Tropism 1835:vpu/vpx 1801:genes: 1770:dimeric 1714:History 1567:gorilla 1495:  1472:  1458:  1450:  1442:  1415:  1407:  1366:  1352:  1344:  1330:  1322:  1277:  1263:  1200:  1177:  1163:  1155:  1147:  1118:  1104:  1096:  1088:  1080:  1072:  1064:  1006:  992:  984:  961:  947:  939:  931:  908:  885:  862:  848:  840:  832:  794:  771:  748:  734:  726:  718:  678:  655:  641:  618:  602:  594:  586:  537:  523:  515:  492:  478:  470:  462:  443:cpzPts 439:  416:  397:cpzPtt 393:  377:  369:  361:  353:  319:Strains 216:strains 201:monkeys 153:Genus: 129:Order: 117:Class: 4854:540001 4757:ERVWE1 4752:ERV-Fc 4338:(EIAV) 4288:(KoRV) 4214:HTLV-2 4209:HTLV-1 3727:et al. 3702:  3692:  3666:Nature 3628:  3618:  3592:Nature 3558:  3548:  3509:  3499:  3458:  3448:  3407:  3397:  3355:  3345:  3301:  3291:  3265:Nature 3232:  3222:  3214:  3175:  3167:  3124:  3114:  3047:  3037:  2995:  2985:  2954:  2908:  2901:393899 2898:  2849:  2839:  2798:  2788:  2747:  2737:  2696:  2673:  2663:  2624:  2614:  2541:  2531:  2523:  2482:  2472:  2441:  2431:  2391:  2383:  2280:: 3–10 2241:horses 2237:cattle 2155:SME543 2119:( - ) 2104:( - ) 2087:SAIDS 2056:HIV-2 2037:HIV-1 2020:strain 1863:capsid 1859:TRIM5Ξ± 1780:Genome 1204:kcol2 1181:kcol1 313:ICTVdB 214:Virus 4893:11723 4875:IRMNG 4841:4XF7K 4344:(BIV) 4332:(PLV) 4326:(FIV) 4320:(SIV) 3788:Virus 3173:S2CID 2389:S2CID 2305:(PDF) 2270:(PDF) 2229:goats 2225:sheep 1736:Bioko 1281:mus1 1129:mus2 912:mnd1 607:HIV-2 496:mnd2 382:HIV-1 291:HIV-2 287:HIV-1 240:HIV-1 236:HIV-2 203:from 79:Realm 72:Virus 4888:NCBI 4862:GBIF 4762:HCP5 3700:PMID 3626:PMID 3556:PMID 3507:PMID 3456:PMID 3405:PMID 3353:PMID 3299:PMID 3230:PMID 3212:ISSN 3165:PMID 3122:PMID 3075:2010 3045:PMID 2993:PMID 2952:PMID 2906:PMID 2847:PMID 2796:PMID 2745:PMID 2694:ISBN 2671:PMID 2622:PMID 2539:PMID 2521:ISSN 2480:PMID 2439:PMID 2381:PMID 2246:SV40 2233:cats 2189:and 2069:AIDS 2050:AIDS 2026:host 1751:and 1499:wol 1476:syk 1462:den 1432:blu 1419:deb 1370:bkm 1356:asc 1334:tal 1303:reg 1267:mon 1226:blc 1167:col 1108:gsn 1010:krc 996:trc 965:olc 951:wrc 889:prg 866:sun 852:lho 798:sab 775:tan 752:ver 738:gri 682:smm 659:stm 645:mne 622:mac 541:agi 527:rcm 482:drl 420:gor 311:The 289:and 265:CCR5 255:and 238:and 4849:EoL 4836:CoL 4312:HIV 3690:PMC 3682:doi 3670:502 3616:PMC 3608:doi 3596:482 3546:PMC 3538:doi 3497:PMC 3487:doi 3446:PMC 3436:doi 3395:PMC 3387:doi 3343:PMC 3333:doi 3289:PMC 3281:doi 3269:460 3220:PMC 3204:doi 3157:doi 3145:313 3112:PMC 3102:doi 3098:105 3035:PMC 3027:doi 2983:PMC 2979:113 2944:doi 2932:228 2896:PMC 2886:doi 2837:PMC 2827:doi 2786:PMC 2776:doi 2735:PMC 2727:doi 2661:PMC 2653:doi 2612:PMC 2604:doi 2529:PMC 2511:doi 2470:PMC 2429:PMC 2421:doi 2417:365 2373:doi 2361:329 2175:HIV 2159:Env 1831:vif 1827:vpr 1823:nef 1819:rev 1815:tat 1811:pol 1807:gag 1803:env 244:HIV 188:SIV 4912:: 4890:: 4877:: 4864:: 4851:: 4838:: 4823:: 4808:: 3790:: 3733:, 3729:: 3698:. 3688:. 3680:. 3668:. 3664:. 3643:. 3624:. 3614:. 3606:. 3594:. 3590:. 3554:. 3544:. 3534:49 3532:. 3528:. 3505:. 3495:. 3481:. 3477:. 3454:. 3444:. 3432:89 3430:. 3426:. 3403:. 3393:. 3383:88 3381:. 3377:. 3365:^ 3351:. 3341:. 3327:. 3323:. 3311:^ 3297:. 3287:. 3279:. 3267:. 3263:. 3228:. 3218:. 3210:. 3200:29 3198:. 3194:. 3171:. 3163:. 3155:. 3143:. 3120:. 3110:. 3096:. 3092:. 3043:. 3033:. 3023:79 3021:. 3017:. 3005:^ 2991:. 2977:. 2973:. 2950:. 2942:. 2930:. 2918:^ 2904:. 2894:. 2884:. 2874:80 2872:. 2868:. 2845:. 2835:. 2821:. 2817:. 2794:. 2784:. 2772:10 2770:. 2766:. 2743:. 2733:. 2721:. 2717:. 2669:. 2659:. 2649:17 2647:. 2643:. 2620:. 2610:. 2598:. 2594:. 2580:^ 2559:. 2537:. 2527:. 2519:. 2507:13 2505:. 2501:. 2478:. 2466:16 2464:. 2460:. 2437:. 2427:. 2415:. 2411:. 2387:. 2379:. 2371:. 2359:. 2332:. 2320:^ 2276:. 2272:. 2239:, 2235:, 2231:, 2227:, 2217:, 2213:, 2205:, 1871:3F 1833:, 1829:, 1825:, 1821:, 1817:, 1813:, 1809:, 1805:, 1704:), 81:: 4489:) 4485:( 4207:( 3962:) 3958:( 3800:) 3780:e 3773:t 3766:v 3706:. 3684:: 3676:: 3647:. 3632:. 3610:: 3602:: 3576:. 3562:. 3540:: 3513:. 3489:: 3483:8 3462:. 3438:: 3411:. 3389:: 3359:. 3335:: 3329:9 3305:. 3283:: 3275:: 3236:. 3206:: 3179:. 3159:: 3151:: 3128:. 3104:: 3077:. 3051:. 3029:: 2999:. 2958:. 2946:: 2938:: 2912:. 2888:: 2880:: 2853:. 2829:: 2823:5 2802:. 2778:: 2751:. 2729:: 2723:8 2702:. 2677:. 2655:: 2628:. 2606:: 2600:1 2563:. 2545:. 2513:: 2486:. 2445:. 2423:: 2397:. 2395:. 2375:: 2367:: 2344:. 2314:. 2287:. 2278:3 1869:/ 1654:) 1619:) 1604:) 1585:) 185:( 20:)

Index

Simian Immunodeficiency Virus

Virus classification
Edit this classification
Virus
Riboviria
Pararnavirae
Artverviricota
Revtraviricetes
Ortervirales
Retroviridae
Lentivirus
retrovirus
primates
monkeys
Bioko Island
rising sea levels
strains
sooty mangabeys
gorillas
chimpanzees
crossed the species barrier
HIV-2
HIV-1
HIV
bushmeat
modern transportation
global commuterism
CCR5
Lentivirus

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