Knowledge (XXG)

Thermococcus litoralis

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Kostyukova AS, Gongadze GM, Polosina YY, Bonch-Osmolovskaya EA, Miroshnichenko ML, Chernyh NA, Obraztsova MV, Svetlichny VA, Messner P, Sleytr UB, L'Haridon S, Jeanthon C, Prieur D (November 1999). "Investigation of structure and antigenic capacities of Thermococcales cell envelopes and
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of eight hours at 95 °C (203 °F) and two hours at 100 °C (212 °F). It also has a proofreading activity that is able to reduce mutation frequencies to a level 2–4 times lower than most non-proofreading DNA polymerases.
766:"Characterization of a DNA polymerase from the hyperthermophile archaea Thermococcus litoralis. Vent DNA polymerase, steady state kinetics, thermal stability, processivity, strand displacement, and exonuclease activities" 621:"Growth Physiology of the Hyperthermophilic Archaeon Thermococcus litoralis: Development of a Sulfur-Free Defined Medium, Characterization of an Exopolysaccharide, and Evidence of Biofilm Formation" 1106: 337:
is 85–88 °C. It also prefers slightly acidic waters, growing between pH 4.0 to 8.0 with the optimal pH between 6.0–6.4. Unlike many other hyperthermophiles,
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at high temperatures found around hydrothermic vents and alanine and glutamate can usually be produced by other hyperthermophilic archaea. The main carbon source for
904:"Crystal structure, SAXS and kinetic mechanism of hyperthermophilic ADP-dependent glucokinase from Thermococcus litoralis reveal a conserved mechanism for catalysis" 1178: 1080: 1119: 686: 504:
Neuner A, Jannasch HW, Belkin S, Stetter KO (1990). "Thermococcus litoralis sp. nov.: A new species of extremely thermophilic marine archaebacteria".
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Bertoldo C, Antranikian G (2006). "Chapter 5: The Order Thermococcales". In Dworkin M, Falkow S, Rosenberg E, Schleifer KH, Stackebrandt E (eds.).
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that does not form hexagonal lattices. Additionally, while many thermococcales obligately use sulfur as an electron acceptor in metabolism,
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has recently been popularized by the scientific community for its ability to produce an alternative DNA polymerase to the commonly used
1183: 807:"Fidelity of DNA synthesis by the Thermococcus litoralis DNA polymerase--an extremely heat stable enzyme with proofreading activity" 341:
is only facultatively dependent on sulfur as a final electron acceptor in fermentation, producing hydrogen gas in its absence and
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must be supplied with amino acids in order to grow at non-reduced rates. The only amino acids it does not require are
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that is between 0.5–3.0 μm (20–118 μin) in diameter. Like the other species in the order thermococcales,
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grows near shallow and deep sea hydrothermal vents in extremely hot water. The optimal growth temperature for
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in that they all have flagella. Through the same processes it has been shown that the previously discovered
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polymerase, dubbed the vent polymerase, has been shown to have a lower error rate than Taq but due to its
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Rivas-Pardo JA, Herrera-Morande A, Castro-Fernandez V, Fernandez FJ, Vega MC, Guixé V (20 June 2013).
1150: 1054: 915: 721:(2006-08-16). "Bioprospecting of organisms from the deep sea: scientific and environmental aspects". 632: 440: 962: 459:, MW and Z-1614, which are most likely new strains. MW and Z-1614 were confirmed to be strains of 746: 590: 529: 165: 161: 29: 468: 1085: 1132: 1041: 943: 890: 836: 787: 738: 698: 658: 582: 521: 350: 1137: 933: 923: 880: 872: 826: 818: 777: 730: 690: 648: 640: 574: 513: 342: 171: 439:
deviates from the common EM pathway is that the modified version contains an ADP dependent
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reclassification of "Caldococcus litoralis" Z-1301 as Thermococcus litoralis Z-1301".
1167: 861:"Genome sequence of the model hyperthermophilic archaeon Thermococcus litoralis NS-C" 644: 52: 750: 594: 533: 182:
that grows between 55–100 °C (131–212 °F). Unlike many other thermococci,
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seems to be maltose, which can be brought into the cell via a maltose-
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only needs sulfur to help stimulate growth, and can live without it.
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as well as shallow submarine thermal springs and oil wells. It is an
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Mattila P, Korpela J, Tenkanen T, Pitkänen K (September 1991).
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has a specialized glycolytic pathway called the modified
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instead of an ATP dependent versions of the enzymes.
988: 293: 283: 278: 262: 254: 242: 237: 232: 435:(EM) pathway. One way the modified EM pathway in 455:New DNA analysis has shown several isolates of 8: 674: 672: 388:as energy sources. In a laboratory setting, 859:Gardner AF, Kumar S, Perler FB (May 2012). 764:Kong H, Kucera RB, Jack WE (January 1993). 723:Clean Technologies and Environmental Policy 976: 275: 190:. Its cell wall consists only of a single 20: 937: 927: 884: 830: 781: 652: 614: 612: 610: 608: 606: 604: 559: 557: 555: 553: 551: 549: 547: 545: 543: 412:because asparagine and glutamine tend to 408:. These amino acids may not be vital for 353:(EPS) that could possibly help it form a 971:- the Bacterial Diversity Metadatabase 496: 317:is stable at high temperatures, with a 1179:Organisms living on hydrothermal vents 625:Applied and Environmental Microbiology 229: 619:Rinker KD, Kelly RM (December 1996). 7: 770:The Journal of Biological Chemistry 14: 178:is an irregular hyperthermophile 645:10.1128/aem.62.12.4478-4485.1996 487:has yet to be fully sequenced. 685:. Springer New York. pp.  160:that is found around deep-sea 1: 783:10.1016/S0021-9258(18)53949-1 349:has been shown to produce an 929:10.1371/journal.pone.0066687 345:when present. Additionally, 218:abilities, but higher than 1200: 1184:Archaea described in 2001 735:10.1007/s10098-006-0062-7 274: 130: 123: 30:Scientific classification 28: 23: 506:Archives of Microbiology 865:Journal of Bacteriology 695:10.1007/0-387-30743-5_5 24:Thermococcus litoralis 1112:thermococcus-litoralis 1020:Thermococcus litoralis 990:Thermococcus litoralis 965:Thermococcus litoralis 823:10.1093/nar/19.18.4967 811:Nucleic Acids Research 315:Thermococcus litoralis 248:Thermococcus litoralis 149:Thermococcus litoralis 134:Thermococcus litoralis 579:10.1007/s007920050122 477:Caldococcus litoralis 465:DNA-DNA hybridization 920:2013PLoSO...866687R 877:10.1128/JB.00123-12 637:1996ApEnM..62.4478R 326:Habitat and ecology 16:Species of archaeon 518:10.1007/BF00247822 365:, and phosphorus. 162:hydrothermal vents 156:) is a species of 140:Neuner et al. 2001 1161: 1160: 1133:Open Tree of Life 982:Taxon identifiers 704:978-0-387-25493-7 483:. The genome for 351:exopolysaccharide 307: 306: 303: 302: 145: 144: 116:T. litoralis 1191: 1154: 1153: 1141: 1140: 1128: 1127: 1115: 1114: 1102: 1101: 1089: 1088: 1076: 1075: 1063: 1062: 1050: 1049: 1037: 1036: 1024: 1023: 1022: 1009: 1008: 1007: 977: 951: 941: 931: 898: 888: 845: 844: 834: 802: 796: 795: 785: 761: 755: 754: 719:Synnes, Marianne 715: 709: 708: 676: 667: 666: 656: 616: 599: 598: 561: 538: 537: 501: 433:Embden–Meyerhoff 357:. It is made of 343:hydrogen sulfide 276: 250: 230: 172:hyperthermophile 136: 21: 1199: 1198: 1194: 1193: 1192: 1190: 1189: 1188: 1164: 1163: 1162: 1157: 1149: 1144: 1136: 1131: 1123: 1118: 1110: 1105: 1097: 1092: 1084: 1079: 1071: 1066: 1058: 1053: 1045: 1040: 1032: 1027: 1018: 1017: 1012: 1003: 1002: 997: 984: 963:Type strain of 959: 954: 901: 858: 854: 852:Further reading 849: 848: 817:(18): 4967–73. 804: 803: 799: 763: 762: 758: 717: 716: 712: 705: 682:The Prokaryotes 678: 677: 670: 631:(12): 4478–85. 618: 617: 602: 563: 562: 541: 503: 502: 498: 493: 453: 425:ABC transporter 371: 328: 246: 228: 141: 138: 132: 119: 105: 91: 89:Thermococcaceae 79: 67: 55: 43: 17: 12: 11: 5: 1197: 1195: 1187: 1186: 1181: 1176: 1166: 1165: 1159: 1158: 1156: 1155: 1142: 1129: 1116: 1103: 1090: 1077: 1064: 1051: 1038: 1025: 1010: 994: 992: 986: 985: 980: 974: 973: 958: 957:External links 955: 953: 952: 899: 855: 853: 850: 847: 846: 797: 776:(3): 1965–75. 756: 710: 703: 668: 600: 539: 512:(2): 205–207. 495: 494: 492: 489: 452: 449: 370: 367: 327: 324: 311:DNA polymerase 305: 304: 301: 300: 295: 291: 290: 285: 281: 280: 272: 271: 266: 260: 259: 256: 252: 251: 244: 240: 239: 235: 234: 233:DNA polymerase 227: 226:DNA polymerase 224: 220:Pfu polymerase 204:Taq polymerase 143: 142: 139: 128: 127: 121: 120: 113: 111: 107: 106: 99: 97: 93: 92: 87: 85: 81: 80: 77:Thermococcales 75: 73: 69: 68: 63: 61: 57: 56: 51: 49: 45: 44: 39: 37: 33: 32: 26: 25: 15: 13: 10: 9: 6: 4: 3: 2: 1196: 1185: 1182: 1180: 1177: 1175: 1174:Euryarchaeota 1172: 1171: 1169: 1152: 1147: 1143: 1139: 1134: 1130: 1126: 1121: 1117: 1113: 1108: 1104: 1100: 1095: 1091: 1087: 1082: 1078: 1074: 1069: 1065: 1061: 1056: 1052: 1048: 1043: 1039: 1035: 1030: 1026: 1021: 1015: 1011: 1006: 1000: 996: 995: 993: 991: 987: 983: 978: 972: 970: 966: 961: 960: 956: 949: 945: 940: 935: 930: 925: 921: 917: 914:(6): e66687. 913: 909: 905: 900: 896: 892: 887: 882: 878: 874: 871:(9): 2375–6. 870: 866: 862: 857: 856: 851: 842: 838: 833: 828: 824: 820: 816: 812: 808: 801: 798: 793: 789: 784: 779: 775: 771: 767: 760: 757: 752: 748: 744: 740: 736: 732: 728: 724: 720: 714: 711: 706: 700: 696: 692: 688: 684: 683: 675: 673: 669: 664: 660: 655: 650: 646: 642: 638: 634: 630: 626: 622: 615: 613: 611: 609: 607: 605: 601: 596: 592: 588: 584: 580: 576: 573:(4): 239–45. 572: 568: 567:Extremophiles 560: 558: 556: 554: 552: 550: 548: 546: 544: 540: 535: 531: 527: 523: 519: 515: 511: 507: 500: 497: 490: 488: 486: 482: 479:was actually 478: 474: 470: 466: 462: 458: 451:Novel strains 450: 448: 446: 442: 441:hexose kinase 438: 434: 430: 426: 423: 419: 415: 411: 407: 403: 399: 395: 391: 387: 383: 379: 375: 368: 366: 364: 360: 356: 352: 348: 344: 340: 336: 332: 325: 323: 320: 316: 312: 299: 296: 292: 289: 286: 282: 277: 273: 270: 267: 265: 261: 257: 253: 249: 245: 241: 236: 231: 225: 223: 221: 217: 213: 209: 205: 201: 197: 193: 189: 185: 181: 177: 173: 170: 167: 163: 159: 155: 151: 150: 137: 135: 129: 126: 125:Binomial name 122: 118: 117: 112: 109: 108: 104: 103: 98: 95: 94: 90: 86: 83: 82: 78: 74: 71: 70: 66: 62: 59: 58: 54: 53:Euryarchaeota 50: 47: 46: 42: 38: 35: 34: 31: 27: 22: 19: 989: 968: 964: 911: 907: 868: 864: 814: 810: 800: 773: 769: 759: 729:(1): 53–59. 726: 722: 713: 681: 628: 624: 570: 566: 509: 505: 499: 485:T. litoralis 484: 481:T. litoralis 480: 476: 473:T. litoralis 472: 461:T. litoralis 460: 457:T. litoralis 456: 454: 437:T. litoralis 436: 429:T. litoralis 428: 418:T. litoralis 417: 410:T. litoralis 409: 390:T. litoralis 389: 376:can utilize 374:T. litoralis 373: 372: 347:T. litoralis 346: 339:T. litoralis 338: 335:T. litoralis 334: 331:T. litoralis 330: 329: 314: 308: 212:proofreading 208:T. litoralis 207: 200:T. litoralis 199: 196:T. litoralis 195: 184:T. litoralis 183: 176:T. litoralis 175: 154:T. litoralis 153: 148: 147: 146: 133: 131: 115: 114: 102:Thermococcus 100: 18: 1014:Wikispecies 386:amino acids 288:Swiss-model 238:Identifiers 216:exonuclease 169:organotroph 65:Thermococci 1168:Categories 491:References 469:C–G ratios 394:asparagine 369:Physiology 284:Structures 279:Search for 188:non-motile 743:1618-954X 526:0302-8933 422:trehalose 414:deaminate 406:glutamate 398:glutamine 319:half-life 166:anaerobic 110:Species: 1086:10032925 1005:Q7783148 999:Wikidata 948:23818958 908:PLOS ONE 895:22493191 751:83996416 663:16535464 595:10052332 587:10591013 534:38723928 463:through 378:pyruvate 363:sulfites 298:InterPro 243:Organism 84:Family: 48:Phylum: 36:Domain: 1138:1043525 1073:1000303 1029:BacDive 939:3688580 916:Bibcode 886:3347054 841:1923765 792:8420970 654:1389002 633:Bibcode 402:alanine 382:maltose 359:mannose 355:biofilm 294:Domains 264:UniProt 192:S-layer 158:Archaea 96:Genus: 72:Order: 60:Class: 41:Archaea 1151:573946 1099:951945 1060:973808 967:at Bac 946:  936:  893:  883:  839:  832:328798 829:  790:  749:  741:  701:  661:  651:  593:  585:  532:  524:  404:, and 384:, and 269:P30317 255:Symbol 214:3’–5’ 206:. The 180:coccus 1146:WoRMS 1081:IRMNG 1047:7C96T 1034:16862 747:S2CID 689:–81. 591:S2CID 530:S2CID 1125:2265 1120:NCBI 1107:LPSN 1094:ITIS 1068:GBIF 969:Dive 944:PMID 891:PMID 837:PMID 788:PMID 739:ISSN 699:ISBN 659:PMID 583:PMID 522:ISSN 443:and 309:The 1055:EoL 1042:CoL 934:PMC 924:doi 881:PMC 873:doi 869:194 827:PMC 819:doi 778:doi 774:268 731:doi 691:doi 649:PMC 641:doi 575:doi 514:doi 510:153 445:PFK 313:of 258:pol 186:is 1170:: 1148:: 1135:: 1122:: 1109:: 1096:: 1083:: 1070:: 1057:: 1044:: 1031:: 1016:: 1001:: 942:. 932:. 922:. 910:. 906:. 889:. 879:. 867:. 863:. 835:. 825:. 815:19 813:. 809:. 786:. 772:. 768:. 745:. 737:. 725:. 697:. 687:69 671:^ 657:. 647:. 639:. 629:62 627:. 623:. 603:^ 589:. 581:. 569:. 542:^ 528:. 520:. 508:. 467:, 427:. 400:, 396:, 380:, 361:, 222:. 950:. 926:: 918:: 912:8 897:. 875:: 843:. 821:: 794:. 780:: 753:. 733:: 727:9 707:. 693:: 665:. 643:: 635:: 597:. 577:: 571:3 536:. 516:: 152:(

Index

Scientific classification
Archaea
Euryarchaeota
Thermococci
Thermococcales
Thermococcaceae
Thermococcus
Binomial name
Archaea
hydrothermal vents
anaerobic
organotroph
hyperthermophile
coccus
non-motile
S-layer
Taq polymerase
proofreading
exonuclease
Pfu polymerase
Thermococcus litoralis
UniProt
P30317
Swiss-model
InterPro
DNA polymerase
half-life
hydrogen sulfide
exopolysaccharide
biofilm

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