Knowledge (XXG)

UPF1

Source πŸ“

330: 307: 204: 229: 2728: 588: 581: 2713: 2698: 2683: 336: 235: 29: 2756: 55: 2286:"Human SMG-1, a novel phosphatidylinositol 3-kinase-related protein kinase, associates with components of the mRNA surveillance complex and is involved in the regulation of nonsense-mediated mRNA decay" 1677:"Human SMG-1, a novel phosphatidylinositol 3-kinase-related protein kinase, associates with components of the mRNA surveillance complex and is involved in the regulation of nonsense-mediated mRNA decay" 1958:"Prediction of the coding sequences of unidentified human genes. VI. The coding sequences of 80 new genes (KIAA0201-KIAA0280) deduced by analysis of cDNA clones from cell line KG-1 and brain" 2727: 2599:"Complexes between the nonsense-mediated mRNA decay pathway factor human upf1 (up-frameshift protein 1) and essential nonsense-mediated mRNA decay factors in HeLa cells" 1731:"Complexes between the nonsense-mediated mRNA decay pathway factor human upf1 (up-frameshift protein 1) and essential nonsense-mediated mRNA decay factors in HeLa cells" 343: 242: 2712: 2697: 2682: 2327:
Lykke-Andersen J, Shu MD, Steitz JA (2001). "Communication of the position of exon-exon junctions to the mRNA surveillance machinery by the protein RNPS1".
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ends upstream from the last exon-exon junction, this triggers NMD to degrade mRNAs containing premature stop codons. This protein is located in both the
2556:"Characterization of human Smg5/7a: A protein with similarities to Caenorhabditis elegans SMG5 and SMG7 that functions in the dephosphorylation of Upf1" 911: 892: 165: 2165:"Identification and Characterization of Human Orthologues to Saccharomyces cerevisiae Upf2 Protein and Upf3 Protein (Caenorhabditis elegans SMG-4)" 2825: 2374:"Identification of delta helicase as the bovine homolog of HUPF1: demonstration of an interaction with the third subunit of DNA polymerase delta" 2801: 2820: 2662: 1381: 52: 1363: 329: 1131: 1138: 306: 1558: 2079:"Characterization of the biochemical properties of the human Upf1 gene product that is involved in nonsense-mediated mRNA decay" 1350: 1329: 2251:"Cloning of a novel phosphatidylinositol kinase-related kinase: characterization of the human SMG-1 RNA surveillance protein" 228: 203: 1460:"Cloning and characterization of HUPF1, a human homolog of the Saccharomyces cerevisiae nonsense mRNA-reducing UPF1 protein" 1346: 1993:"The surveillance complex interacts with the translation release factors to enhance termination and degrade aberrant mRNAs" 2036:"SMG-2 Is a Phosphorylated Protein Required for mRNA Surveillance in Caenorhabditis elegans and Related to Upf1p of Yeast" 1509:"The RNA helicase UPF1 associates with mRNAs co-transcriptionally and is required for the release of mRNAs from gene loci" 1325: 1229: 145: 2122:"Novel Upf2p Orthologues Suggest a Functional Link between Translation Initiation and Nonsense Surveillance Complexes" 1780:"Novel Upf2p orthologues suggest a functional link between translation initiation and nonsense surveillance complexes" 1261: 1507:
Singh AK, Choudhury SR, De S, Zhang J, Kissane S, Dwivedi V, et al. (March 2019). Singer RH, Manley JL (eds.).
342: 241: 2794: 1631:"Nonsense-mediated mRNA decay in mammalian cells involves decapping, deadenylating, and exonucleolytic activities" 2655: 335: 234: 956: 153: 2208:"Human Upf proteins target an mRNA for nonsense-mediated decay when bound downstream of a termination codon" 1834:"Human Upf proteins target an mRNA for nonsense-mediated decay when bound downstream of a termination codon" 1245: 937: 2787: 1233: 1213: 217: 2460:"Identification of a Human Decapping Complex Associated with hUpf Proteins in Nonsense-Mediated Decay" 1577:"Identification of a human decapping complex associated with hUpf proteins in nonsense-mediated decay" 2648: 2514: 2336: 1412: 1089: 132: 1110: 1081: 1051: 1030: 1923:"Analysis of the stimulatory factor of RNA polymerase II in the initiation and elongation complex" 2446: 2360: 2237: 1863: 1225: 177: 2503:"Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences" 1114: 1085: 1055: 1026: 2736:: CRYSTAL STRUCTURE OF THE UPF2-INTERACTING DOMAIN OF NONSENSE MEDIATED MRNA DECAY FACTOR UPF1 2628: 2585: 2542: 2489: 2438: 2403: 2352: 2315: 2272: 2229: 2194: 2151: 2108: 2065: 2022: 1979: 1944: 1909: 1855: 1809: 1760: 1706: 1652: 1606: 1540: 1489: 1440: 1221: 125: 45: 2771: 2618: 2610: 2575: 2567: 2532: 2522: 2479: 2471: 2428: 2393: 2385: 2344: 2305: 2297: 2262: 2219: 2184: 2176: 2141: 2133: 2098: 2090: 2055: 2047: 2012: 2004: 1969: 1934: 1899: 1845: 1799: 1791: 1750: 1742: 1696: 1688: 1642: 1596: 1588: 1530: 1520: 1479: 1471: 1430: 1420: 1244:. When translation ends, it interacts with the functional homolog of yeast Upf2p to trigger 587: 580: 422: 353: 297: 252: 1249: 397: 173: 136:, HNORF1, RENT1, pNORF1, smg-2, RNA helicase and ATPase, UPF1 RNA helicase and ATPase, UTF 2518: 2340: 1416: 2623: 2598: 2580: 2555: 2417:"Separable roles for rent1/hUpf1 in altered splicing and decay of nonsense transcripts" 2103: 2078: 1755: 1730: 1535: 1508: 2537: 2502: 2484: 2459: 2398: 2373: 2310: 2285: 2224: 2207: 2017: 1992: 1939: 1922: 1850: 1833: 1701: 1676: 1647: 1630: 1601: 1576: 1484: 1459: 1212:
This gene encodes a protein that is part of a post-splicing multiprotein complex, the
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nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decay
1241: 415: 194: 157: 2364: 2180: 1399:
Perlick HA, Medghalchi SM, Spencer FA, Kendzior RJ Jr, Dietz HC (November 1996).
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National Center for Biotechnology Information, U.S. National Library of Medicine
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National Center for Biotechnology Information, U.S. National Library of Medicine
1281: 498: 2094: 314: 211: 161: 2389: 1974: 1957: 1425: 1401:"Mammalian orthologues of a yeast regulator of nonsense transcript stability" 2433: 2416: 2348: 1237: 856: 558: 436: 381: 368: 280: 267: 169: 2632: 2589: 2546: 2527: 2493: 2442: 2407: 2356: 2319: 2276: 2267: 2250: 2233: 2198: 2155: 2112: 2069: 2008: 1913: 1859: 1813: 1764: 1710: 1656: 1610: 1544: 1475: 2051: 2026: 1983: 1948: 1493: 1444: 1178: 1173: 1904: 1887: 1162: 1001: 982: 2571: 1525: 2614: 2301: 1746: 1692: 1194: 968: 923: 2721:: Structural and Functional insights into the human Upf1 helicase core 2706:: Structural and Functional insights into the human Upf1 helicase core 2691:: Structural and functional insights into the human Upf1 helicase core 1729:
Schell T, KΓΆcher T, Wilm M, Seraphin B, Kulozik AE, Hentze MW (2003).
102: 98: 94: 90: 86: 82: 78: 74: 1146: 878: 2755: 1559:"UPF1 UPF1 RNA helicase and ATPase [ Homo sapiens (human) ]" 1991:
Czaplinski K, Ruiz-Echevarria MJ, Paushkin SV, et al. (1998).
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nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
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Mendell JT, Medghalchi SM, Lake RG, Noensie EN, Dietz HC (2000).
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Bhattacharya A, Czaplinski K, Trifillis P, et al. (2000).
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Strausberg RL, Feingold EA, Grouse LH, et al. (2003).
1888:"The double life of UPF1 in RNA and DNA stability pathways" 1675:
Yamashita A, Ohnishi T, Kashima I, Taya Y, Ohno S (2001).
1224:. mRNA surveillance detects exported mRNAs with truncated 2120:
Mendell JT, Medghalchi SM, Lake RG, et al. (2000).
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Yamashita A, Ohnishi T, Kashima I, et al. (2001).
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Denning G, Jamieson L, Maquat LE, et al. (2001).
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Applequist SE, Selg M, Raman C, Jack HM (March 1997).
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telomere maintenance via semi-conservative replication
570: 2163:Serin G, Gersappe A, Black JD, et al. (2001). 1103: 1074: 1044: 1019: 792:
dosage compensation by inactivation of X chromosome
1956:Nagase T, Seki N, Ishikawa K, et al. (1997). 1342: 1340: 1338: 1321: 1319: 1317: 2372:Carastro LM, Tan CK, Selg M, et al. (2002). 352: 251: 2597:Schell T, KΓΆcher T, Wilm M, et al. (2003). 2034:Page MF, Carr B, Anders KR, et al. (1999). 1827: 1825: 1823: 1724: 1722: 1720: 1670: 1668: 1666: 1624: 1622: 1620: 16:Protein-coding gene in the species Homo sapiens 1570: 1568: 1347:GRCm38: Ensembl release 89: ENSMUSG00000058301 2795: 2656: 2554:Chiu SY, Serin G, Ohara O, Maquat LE (2003). 757:positive regulation of mRNA catabolic process 8: 2206:Lykke-Andersen J, Shu MD, Steitz JA (2001). 1832:Lykke-Andersen J, Shu MD, Steitz JA (2000). 1326:GRCh38: Ensembl release 89: ENSG00000005007 2802: 2788: 2663: 2649: 2641: 1921:Horikoshi M, Sekimizu K, Natori S (1984). 852: 772:nuclear-transcribed mRNA catabolic process 612: 393: 292: 189: 63: 2622: 2579: 2536: 2526: 2483: 2432: 2415:Mendell JT, ap Rhys CM, Dietz HC (2002). 2397: 2309: 2266: 2223: 2188: 2145: 2102: 2059: 2016: 1973: 1938: 1903: 1849: 1803: 1754: 1700: 1646: 1600: 1534: 1524: 1483: 1434: 1424: 2678: 1313: 797:cellular response to lipopolysaccharide 747:regulation of translational termination 18: 357: 318: 313: 256: 215: 210: 7: 2752: 2750: 1252:sites has been noted for this gene. 802:3'-UTR-mediated mRNA destabilization 1629:Lejeune F, Li X, Maquat LE (2003). 1191:Regulator of nonsense transcripts 1 2774:. You can help Knowledge (XXG) by 1100: 1071: 1041: 1016: 992: 973: 947: 928: 902: 883: 817:regulation of telomere maintenance 777:cellular response to interleukin-1 575: 493: 431: 410: 14: 1197:that in humans is encoded by the 2754: 2726: 2711: 2696: 2681: 2476:10.1128/MCB.22.23.8114-8121.2002 2138:10.1128/MCB.20.23.8944-8957.2000 1796:10.1128/MCB.20.23.8944-8957.2000 1593:10.1128/MCB.22.23.8114-8121.2002 586: 579: 341: 334: 328: 305: 240: 233: 227: 202: 27: 2826:Human chromosome 19 gene stubs 1886:Azzalin CM, Lingner J (2006). 787:histone mRNA catabolic process 597:More reference expression data 559:More reference expression data 455:olfactory zone of nasal mucosa 447:right hemisphere of cerebellum 1: 2225:10.1016/S0092-8674(00)00214-2 2181:10.1128/MCB.21.1.209-223.2001 1940:10.1016/S0021-9258(17)43705-7 1851:10.1016/S0092-8674(00)00214-2 1648:10.1016/S1097-2765(03)00349-6 326: 225: 2821:Genes on human chromosome 19 2507:Proc. Natl. Acad. Sci. U.S.A 1230:nonsense-mediated mRNA decay 822:cell cycle phase transition 483:stromal cell of endometrium 479:right lobe of thyroid gland 2842: 2749: 706:exon-exon junction complex 451:mucosa of transverse colon 2676: 2458:Lykke-Andersen J (2003). 2095:10.1017/S1355838200000546 1575:Lykke-Andersen J (2002). 1382:"Mouse PubMed Reference:" 1364:"Human PubMed Reference:" 1177: 1172: 1168: 1161: 1145: 1126: 1107: 1078: 1067: 1048: 1023: 1012: 999: 995: 980: 976: 967: 954: 950: 935: 931: 922: 909: 905: 890: 886: 877: 862: 855: 851: 835: 711:supraspliceosomal complex 615: 611: 594: 578: 569: 556: 505: 496: 443: 434: 404: 396: 392: 375: 362: 325: 304: 295: 291: 274: 261: 224: 201: 192: 188: 143: 140: 130: 123: 118: 71: 66: 49: 44: 39: 35: 26: 21: 1426:10.1073/pnas.93.20.10928 1405:Proc Natl Acad Sci U S A 1132:Chr 19: 18.83 – 18.87 Mb 762:mRNA export from nucleus 2434:10.1126/science.1074428 2349:10.1126/science.1062786 1139:Chr 8: 70.78 – 70.81 Mb 2528:10.1073/pnas.242603899 2390:10.1093/nar/30.10.2232 2268:10.1074/jbc.C100144200 2009:10.1101/gad.12.11.1665 1975:10.1093/dnares/3.5.321 545:neural layer of retina 359:8 B3.3|8 34.15 cM 2052:10.1128/MCB.19.9.5943 1214:exon junction complex 640:telomeric DNA binding 218:Chromosome 19 (human) 1968:(5): 321–9, 341–54. 1905:10.4161/cc.5.14.3093 1476:10.1093/nar/25.4.814 320:Chromosome 8 (mouse) 67:List of PDB id codes 40:Available structures 2572:10.1261/rna.2137903 2519:2002PNAS...9916899M 2341:2001Sci...293.1836L 1526:10.7554/eLife.41444 1417:1996PNAS...9310928P 1226:open reading frames 1220:nuclear export and 1216:, involved in both 2762:This article on a 2615:10.1042/BJ20021920 2302:10.1101/gad.913001 1747:10.1042/BJ20021920 1693:10.1101/gad.913001 1248:. Use of multiple 957:ENSMUSG00000058301 740:Biological process 689:Cellular component 665:hydrolase activity 630:nucleotide binding 623:Molecular function 471:right uterine tube 467:anterior pituitary 2783: 2782: 2744: 2743: 2513:(26): 16899–903. 2378:Nucleic Acids Res 1464:Nucleic Acids Res 1222:mRNA surveillance 1188: 1187: 1184: 1183: 1157: 1156: 1122: 1121: 1097: 1096: 1063: 1062: 1038: 1037: 1008: 1007: 989: 988: 963: 962: 944: 943: 918: 917: 899: 898: 847: 846: 675:helicase activity 655:metal ion binding 650:chromatin binding 607: 606: 603: 602: 565: 564: 552: 551: 490: 489: 388: 387: 287: 286: 114: 113: 110: 109: 50:Ortholog search: 2833: 2804: 2797: 2790: 2758: 2751: 2730: 2715: 2700: 2685: 2665: 2658: 2651: 2642: 2636: 2626: 2609:(Pt 3): 775–83. 2593: 2583: 2550: 2540: 2530: 2497: 2487: 2454: 2436: 2427:(5592): 419–22. 2411: 2401: 2368: 2335:(5536): 1836–9. 2323: 2313: 2280: 2270: 2261:(25): 22709–14. 2245: 2227: 2202: 2192: 2159: 2149: 2116: 2106: 2073: 2063: 2030: 2020: 1987: 1977: 1952: 1942: 1917: 1907: 1872: 1871: 1853: 1829: 1818: 1817: 1807: 1775: 1769: 1768: 1758: 1741:(Pt 3): 775–83. 1726: 1715: 1714: 1704: 1672: 1661: 1660: 1650: 1626: 1615: 1614: 1604: 1572: 1563: 1562: 1555: 1549: 1548: 1538: 1528: 1504: 1498: 1497: 1487: 1455: 1449: 1448: 1438: 1428: 1411:(20): 10928–32. 1396: 1390: 1389: 1378: 1372: 1371: 1360: 1354: 1344: 1333: 1323: 1170: 1169: 1141: 1134: 1117: 1101: 1092: 1072: 1068:RefSeq (protein) 1058: 1042: 1033: 1017: 993: 974: 948: 929: 903: 884: 853: 645:zinc ion binding 613: 599: 590: 583: 576: 561: 533:ventricular zone 529:secondary oocyte 501: 499:Top expressed in 494: 439: 437:Top expressed in 432: 411: 394: 384: 371: 360: 345: 338: 332: 321: 309: 293: 283: 270: 259: 244: 237: 231: 220: 206: 190: 184: 182:UPF1 - orthologs 135: 128: 105: 64: 58: 37: 36: 31: 19: 2841: 2840: 2836: 2835: 2834: 2832: 2831: 2830: 2811: 2810: 2809: 2808: 2747: 2745: 2740: 2737: 2731: 2722: 2716: 2707: 2701: 2692: 2686: 2672: 2669: 2639: 2596: 2553: 2500: 2470:(23): 8114–21. 2464:Mol. Cell. Biol 2457: 2414: 2384:(10): 2232–43. 2371: 2326: 2296:(17): 2215–28. 2283: 2248: 2205: 2169:Mol. Cell. Biol 2162: 2132:(23): 8944–57. 2126:Mol. Cell. Biol 2119: 2076: 2040:Mol. Cell. Biol 2033: 2003:(11): 1665–77. 1990: 1955: 1920: 1885: 1881: 1879:Further reading 1876: 1875: 1831: 1830: 1821: 1790:(23): 8944–57. 1784:Mol. Cell. Biol 1777: 1776: 1772: 1728: 1727: 1718: 1687:(17): 2215–28. 1674: 1673: 1664: 1628: 1627: 1618: 1587:(23): 8114–21. 1581:Mol. Cell. Biol 1574: 1573: 1566: 1557: 1556: 1552: 1506: 1505: 1501: 1457: 1456: 1452: 1398: 1397: 1393: 1380: 1379: 1375: 1362: 1361: 1357: 1345: 1336: 1324: 1315: 1310: 1305: 1258: 1250:polyadenylation 1210: 1179:View/Edit Mouse 1174:View/Edit Human 1137: 1130: 1127:Location (UCSC) 1113: 1109: 1088: 1084: 1080: 1054: 1050: 1029: 1025: 938:ENSG00000005007 831: 767:DNA replication 735: 684: 660:protein binding 595: 585: 584: 557: 548: 543: 541:muscle of thigh 539: 535: 531: 527: 525:ascending aorta 523: 519: 515: 511: 497: 486: 481: 477: 473: 469: 465: 461: 457: 453: 449: 435: 379: 366: 358: 348: 347: 346: 339: 319: 296:Gene location ( 278: 265: 257: 247: 246: 245: 238: 216: 193:Gene location ( 144: 131: 124: 73: 51: 17: 12: 11: 5: 2839: 2837: 2829: 2828: 2823: 2813: 2812: 2807: 2806: 2799: 2792: 2784: 2781: 2780: 2759: 2742: 2741: 2739: 2738: 2732: 2725: 2723: 2717: 2710: 2708: 2702: 2695: 2693: 2687: 2680: 2677: 2674: 2673: 2670: 2668: 2667: 2660: 2653: 2645: 2638: 2637: 2594: 2551: 2498: 2455: 2412: 2369: 2324: 2281: 2246: 2218:(7): 1121–31. 2203: 2160: 2117: 2089:(9): 1226–35. 2074: 2046:(9): 5943–51. 2031: 1988: 1953: 1918: 1898:(14): 1496–8. 1882: 1880: 1877: 1874: 1873: 1844:(7): 1121–31. 1819: 1770: 1716: 1662: 1616: 1564: 1550: 1499: 1450: 1391: 1373: 1355: 1334: 1312: 1311: 1309: 1306: 1304: 1303: 1297: 1291: 1285: 1279: 1273: 1266: 1257: 1254: 1246:mRNA decapping 1228:and initiates 1209: 1206: 1186: 1185: 1182: 1181: 1176: 1166: 1165: 1159: 1158: 1155: 1154: 1152: 1150: 1143: 1142: 1135: 1128: 1124: 1123: 1120: 1119: 1105: 1104: 1098: 1095: 1094: 1090:NP_001284478.1 1076: 1075: 1069: 1065: 1064: 1061: 1060: 1046: 1045: 1039: 1036: 1035: 1021: 1020: 1014: 1010: 1009: 1006: 1005: 997: 996: 990: 987: 986: 978: 977: 971: 965: 964: 961: 960: 952: 951: 945: 942: 941: 933: 932: 926: 920: 919: 916: 915: 907: 906: 900: 897: 896: 888: 887: 881: 875: 874: 869: 864: 860: 859: 849: 848: 845: 844: 833: 832: 830: 829: 824: 819: 814: 809: 804: 799: 794: 789: 784: 779: 774: 769: 764: 759: 754: 749: 743: 741: 737: 736: 734: 733: 728: 723: 718: 713: 708: 703: 698: 692: 690: 686: 685: 683: 682: 677: 672: 667: 662: 657: 652: 647: 642: 637: 632: 626: 624: 620: 619: 609: 608: 605: 604: 601: 600: 592: 591: 573: 567: 566: 563: 562: 554: 553: 550: 549: 547: 546: 542: 538: 534: 530: 526: 522: 518: 514: 510: 506: 503: 502: 491: 488: 487: 485: 484: 480: 476: 472: 468: 464: 460: 456: 452: 448: 444: 441: 440: 428: 427: 419: 408: 402: 401: 398:RNA expression 390: 389: 386: 385: 377: 373: 372: 364: 361: 356: 350: 349: 340: 333: 327: 323: 322: 317: 311: 310: 302: 301: 289: 288: 285: 284: 276: 272: 271: 263: 260: 255: 249: 248: 239: 232: 226: 222: 221: 214: 208: 207: 199: 198: 186: 185: 142: 138: 137: 129: 121: 120: 116: 115: 112: 111: 108: 107: 69: 68: 60: 59: 48: 42: 41: 33: 32: 24: 23: 15: 13: 10: 9: 6: 4: 3: 2: 2838: 2827: 2824: 2822: 2819: 2818: 2816: 2805: 2800: 2798: 2793: 2791: 2786: 2785: 2779: 2777: 2773: 2769: 2768:chromosome 19 2765: 2760: 2757: 2753: 2748: 2735: 2729: 2724: 2720: 2714: 2709: 2705: 2699: 2694: 2690: 2684: 2679: 2675: 2666: 2661: 2659: 2654: 2652: 2647: 2646: 2643: 2634: 2630: 2625: 2620: 2616: 2612: 2608: 2604: 2600: 2595: 2591: 2587: 2582: 2577: 2573: 2569: 2565: 2561: 2557: 2552: 2548: 2544: 2539: 2534: 2529: 2524: 2520: 2516: 2512: 2508: 2504: 2499: 2495: 2491: 2486: 2481: 2477: 2473: 2469: 2465: 2461: 2456: 2452: 2448: 2444: 2440: 2435: 2430: 2426: 2422: 2418: 2413: 2409: 2405: 2400: 2395: 2391: 2387: 2383: 2379: 2375: 2370: 2366: 2362: 2358: 2354: 2350: 2346: 2342: 2338: 2334: 2330: 2325: 2321: 2317: 2312: 2307: 2303: 2299: 2295: 2291: 2287: 2282: 2278: 2274: 2269: 2264: 2260: 2256: 2255:J. Biol. Chem 2252: 2247: 2243: 2239: 2235: 2231: 2226: 2221: 2217: 2213: 2209: 2204: 2200: 2196: 2191: 2186: 2182: 2178: 2175:(1): 209–23. 2174: 2170: 2166: 2161: 2157: 2153: 2148: 2143: 2139: 2135: 2131: 2127: 2123: 2118: 2114: 2110: 2105: 2100: 2096: 2092: 2088: 2084: 2080: 2075: 2071: 2067: 2062: 2057: 2053: 2049: 2045: 2041: 2037: 2032: 2028: 2024: 2019: 2014: 2010: 2006: 2002: 1998: 1994: 1989: 1985: 1981: 1976: 1971: 1967: 1963: 1959: 1954: 1950: 1946: 1941: 1936: 1933:(1): 608–11. 1932: 1928: 1927:J. Biol. Chem 1924: 1919: 1915: 1911: 1906: 1901: 1897: 1893: 1889: 1884: 1883: 1878: 1869: 1865: 1861: 1857: 1852: 1847: 1843: 1839: 1835: 1828: 1826: 1824: 1820: 1815: 1811: 1806: 1801: 1797: 1793: 1789: 1785: 1781: 1774: 1771: 1766: 1762: 1757: 1752: 1748: 1744: 1740: 1736: 1732: 1725: 1723: 1721: 1717: 1712: 1708: 1703: 1698: 1694: 1690: 1686: 1682: 1678: 1671: 1669: 1667: 1663: 1658: 1654: 1649: 1644: 1641:(3): 675–87. 1640: 1636: 1632: 1625: 1623: 1621: 1617: 1612: 1608: 1603: 1598: 1594: 1590: 1586: 1582: 1578: 1571: 1569: 1565: 1560: 1554: 1551: 1546: 1542: 1537: 1532: 1527: 1522: 1518: 1514: 1510: 1503: 1500: 1495: 1491: 1486: 1481: 1477: 1473: 1470:(4): 814–21. 1469: 1465: 1461: 1454: 1451: 1446: 1442: 1437: 1432: 1427: 1422: 1418: 1414: 1410: 1406: 1402: 1395: 1392: 1387: 1383: 1377: 1374: 1369: 1365: 1359: 1356: 1352: 1348: 1343: 1341: 1339: 1335: 1331: 1327: 1322: 1320: 1318: 1314: 1307: 1301: 1298: 1295: 1292: 1289: 1286: 1283: 1280: 1277: 1274: 1271: 1268: 1267: 1265: 1263: 1255: 1253: 1251: 1247: 1243: 1239: 1235: 1231: 1227: 1223: 1219: 1215: 1207: 1205: 1203: 1200: 1196: 1192: 1180: 1175: 1171: 1167: 1164: 1160: 1153: 1151: 1148: 1144: 1140: 1136: 1133: 1129: 1125: 1118: 1116: 1112: 1106: 1102: 1099: 1093: 1091: 1087: 1083: 1077: 1073: 1070: 1066: 1059: 1057: 1053: 1047: 1043: 1040: 1034: 1032: 1028: 1022: 1018: 1015: 1013:RefSeq (mRNA) 1011: 1004: 1003: 998: 994: 991: 985: 984: 979: 975: 972: 970: 966: 959: 958: 953: 949: 946: 940: 939: 934: 930: 927: 925: 921: 914: 913: 908: 904: 901: 895: 894: 889: 885: 882: 880: 876: 873: 870: 868: 865: 861: 858: 854: 850: 843: 839: 834: 828: 827:viral process 825: 823: 820: 818: 815: 813: 810: 808: 805: 803: 800: 798: 795: 793: 790: 788: 785: 783: 780: 778: 775: 773: 770: 768: 765: 763: 760: 758: 755: 753: 750: 748: 745: 744: 742: 739: 738: 732: 729: 727: 724: 722: 719: 717: 714: 712: 709: 707: 704: 702: 699: 697: 694: 693: 691: 688: 687: 681: 678: 676: 673: 671: 668: 666: 663: 661: 658: 656: 653: 651: 648: 646: 643: 641: 638: 636: 633: 631: 628: 627: 625: 622: 621: 618: 617:Gene ontology 614: 610: 598: 593: 589: 582: 577: 574: 572: 568: 560: 555: 544: 540: 536: 532: 528: 524: 520: 516: 512: 508: 507: 504: 500: 495: 492: 482: 478: 474: 470: 466: 462: 458: 454: 450: 446: 445: 442: 438: 433: 430: 429: 426: 424: 420: 418: 417: 413: 412: 409: 407: 403: 399: 395: 391: 383: 378: 374: 370: 365: 355: 351: 344: 337: 331: 324: 316: 312: 308: 303: 299: 294: 290: 282: 277: 273: 269: 264: 254: 250: 243: 236: 230: 223: 219: 213: 209: 205: 200: 196: 191: 187: 183: 179: 175: 171: 167: 163: 159: 155: 151: 147: 139: 134: 127: 122: 117: 106: 104: 100: 96: 92: 88: 84: 80: 76: 70: 65: 62: 61: 57: 54: 47: 43: 38: 34: 30: 25: 20: 2776:expanding it 2761: 2746: 2733: 2718: 2703: 2688: 2606: 2602: 2566:(1): 77–87. 2563: 2559: 2510: 2506: 2467: 2463: 2424: 2420: 2381: 2377: 2332: 2328: 2293: 2289: 2258: 2254: 2215: 2211: 2172: 2168: 2129: 2125: 2086: 2082: 2043: 2039: 2000: 1996: 1965: 1961: 1930: 1926: 1895: 1891: 1841: 1837: 1787: 1783: 1773: 1738: 1734: 1684: 1680: 1638: 1634: 1584: 1580: 1553: 1516: 1512: 1502: 1467: 1463: 1453: 1408: 1404: 1394: 1385: 1376: 1367: 1358: 1259: 1256:Interactions 1232:(NMD). When 1211: 1198: 1190: 1189: 1111:NP_001116301 1108: 1082:NP_001284478 1079: 1052:NM_001122829 1049: 1031:NM_001297549 1024: 1000: 981: 955: 936: 910: 891: 871: 866: 513:aortic valve 509:spermatocyte 475:right testis 421: 414: 141:External IDs 72: 2671:PDB gallery 1234:translation 716:nucleoplasm 680:RNA binding 670:ATP binding 635:DNA binding 517:granulocyte 463:skin of leg 459:granulocyte 380:70,805,928 367:70,784,175 279:18,868,230 266:18,831,959 119:Identifiers 2815:Categories 2603:Biochem. J 1892:Cell Cycle 1735:Biochem. J 1519:: e41444. 1353:, May 2017 1332:, May 2017 1308:References 807:DNA repair 425:(ortholog) 162:HomoloGene 2766:on human 2290:Genes Dev 1997:Genes Dev 1681:Genes Dev 1635:Mol. Cell 1262:interacts 1238:cytoplasm 1115:NP_109605 1086:NP_002902 1056:NM_030680 1027:NM_002911 857:Orthologs 726:cytoplasm 721:chromatin 170:GeneCards 2633:12723973 2590:12554878 2547:12477932 2494:12417715 2451:46447414 2443:12228722 2408:12000843 2357:11546874 2320:11544179 2277:11331269 2242:18417600 2234:11163187 2199:11113196 2156:11073994 2113:10999600 2070:10454541 1914:16861888 1868:18417600 1860:11163187 1814:11073994 1765:12723973 1711:11544179 1657:14527413 1611:12417715 1545:30907728 1349:– 1328:– 1208:Function 1163:Wikidata 836:Sources: 537:yolk sac 258:19p13.11 2624:1223536 2581:1370372 2515:Bibcode 2421:Science 2337:Bibcode 2329:Science 2104:1369996 2027:9620853 1984:9039502 1962:DNA Res 1949:6200476 1756:1223536 1536:6447362 1494:9064659 1445:8855285 1413:Bibcode 1351:Ensembl 1330:Ensembl 1242:nucleus 1195:protein 969:UniProt 924:Ensembl 863:Species 842:QuickGO 731:nucleus 696:cytosol 400:pattern 126:Aliases 2631:  2621:  2588:  2578:  2545:  2538:139241 2535:  2492:  2485:134073 2482:  2449:  2441:  2406:  2399:115286 2396:  2365:389385 2363:  2355:  2318:  2311:312771 2308:  2275:  2240:  2232:  2197:  2187:  2154:  2144:  2111:  2101:  2068:  2058:  2025:  2018:316864 2015:  1982:  1947:  1912:  1866:  1858:  1812:  1802:  1763:  1753:  1709:  1702:312771 1699:  1655:  1609:  1602:134073 1599:  1543:  1533:  1492:  1485:146496 1482:  1443:  1433:  1264:with: 1149:search 1147:PubMed 1002:Q9EPU0 983:Q92900 879:Entrez 701:P-body 571:BioGPS 158:107995 150:601430 2770:is a 2447:S2CID 2361:S2CID 2238:S2CID 2190:88795 2147:86549 2061:84455 1864:S2CID 1805:86549 1513:eLife 1436:38260 1300:UPF3B 1296:, and 1294:UPF3A 1270:DCP1A 1260:UPF1 1193:is a 912:19704 872:Mouse 867:Human 838:Amigo 423:Mouse 416:Human 363:Start 298:Mouse 262:Start 195:Human 2772:stub 2764:gene 2734:2iyk 2719:2gk7 2704:2gk6 2689:2gjk 2629:PMID 2586:PMID 2543:PMID 2490:PMID 2439:PMID 2404:PMID 2353:PMID 2316:PMID 2273:PMID 2230:PMID 2212:Cell 2195:PMID 2152:PMID 2109:PMID 2066:PMID 2023:PMID 1980:PMID 1945:PMID 1910:PMID 1856:PMID 1838:Cell 1810:PMID 1761:PMID 1707:PMID 1653:PMID 1607:PMID 1541:PMID 1490:PMID 1441:PMID 1288:UPF2 1282:SMG1 1276:DCP2 1240:and 1218:mRNA 1202:gene 1199:UPF1 893:5976 406:Bgee 354:Band 315:Chr. 253:Band 212:Chr. 174:UPF1 166:2185 146:OMIM 133:UPF1 103:2XZP 99:2XZO 95:2WJY 91:2WJV 87:2IYK 83:2GK7 79:2GK6 75:2GJK 56:RCSB 53:PDBe 22:UPF1 2619:PMC 2611:doi 2607:373 2576:PMC 2568:doi 2560:RNA 2533:PMC 2523:doi 2480:PMC 2472:doi 2429:doi 2425:298 2394:PMC 2386:doi 2345:doi 2333:293 2306:PMC 2298:doi 2263:doi 2259:276 2220:doi 2216:103 2185:PMC 2177:doi 2142:PMC 2134:doi 2099:PMC 2091:doi 2083:RNA 2056:PMC 2048:doi 2013:PMC 2005:doi 1970:doi 1935:doi 1931:259 1900:doi 1846:doi 1842:103 1800:PMC 1792:doi 1751:PMC 1743:doi 1739:373 1697:PMC 1689:doi 1643:doi 1597:PMC 1589:doi 1531:PMC 1521:doi 1480:PMC 1472:doi 1431:PMC 1421:doi 521:lip 376:End 275:End 178:OMA 154:MGI 46:PDB 2817:: 2627:. 2617:. 2605:. 2601:. 2584:. 2574:. 2562:. 2558:. 2541:. 2531:. 2521:. 2511:99 2509:. 2505:. 2488:. 2478:. 2468:22 2466:. 2462:. 2445:. 2437:. 2423:. 2419:. 2402:. 2392:. 2382:30 2380:. 2376:. 2359:. 2351:. 2343:. 2331:. 2314:. 2304:. 2294:15 2292:. 2288:. 2271:. 2257:. 2253:. 2236:. 2228:. 2214:. 2210:. 2193:. 2183:. 2173:21 2171:. 2167:. 2150:. 2140:. 2130:20 2128:. 2124:. 2107:. 2097:. 2085:. 2081:. 2064:. 2054:. 2044:19 2042:. 2038:. 2021:. 2011:. 2001:12 1999:. 1995:. 1978:. 1964:. 1960:. 1943:. 1929:. 1925:. 1908:. 1894:. 1890:. 1862:. 1854:. 1840:. 1836:. 1822:^ 1808:. 1798:. 1788:20 1786:. 1782:. 1759:. 1749:. 1737:. 1733:. 1719:^ 1705:. 1695:. 1685:15 1683:. 1679:. 1665:^ 1651:. 1639:12 1637:. 1633:. 1619:^ 1605:. 1595:. 1585:22 1583:. 1579:. 1567:^ 1539:. 1529:. 1515:. 1511:. 1488:. 1478:. 1468:25 1466:. 1462:. 1439:. 1429:. 1419:. 1409:93 1407:. 1403:. 1384:. 1366:. 1337:^ 1316:^ 1204:. 840:/ 382:bp 369:bp 281:bp 268:bp 176:; 172:: 168:; 164:: 160:; 156:: 152:; 148:: 101:, 97:, 93:, 89:, 85:, 81:, 77:, 2803:e 2796:t 2789:v 2778:. 2664:e 2657:t 2650:v 2635:. 2613:: 2592:. 2570:: 2564:9 2549:. 2525:: 2517:: 2496:. 2474:: 2453:. 2431:: 2410:. 2388:: 2367:. 2347:: 2339:: 2322:. 2300:: 2279:. 2265:: 2244:. 2222:: 2201:. 2179:: 2158:. 2136:: 2115:. 2093:: 2087:6 2072:. 2050:: 2029:. 2007:: 1986:. 1972:: 1966:3 1951:. 1937:: 1916:. 1902:: 1896:5 1870:. 1848:: 1816:. 1794:: 1767:. 1745:: 1713:. 1691:: 1659:. 1645:: 1613:. 1591:: 1561:. 1547:. 1523:: 1517:8 1496:. 1474:: 1447:. 1423:: 1415:: 1388:. 1370:. 1302:. 1290:, 1284:, 1278:, 1272:, 300:) 197:) 180::

Index


PDB
PDBe
RCSB
2GJK
2GK6
2GK7
2IYK
2WJV
2WJY
2XZO
2XZP
Aliases
UPF1
OMIM
601430
MGI
107995
HomoloGene
2185
GeneCards
UPF1
OMA
UPF1 - orthologs
Human
Chromosome 19 (human)
Chr.
Chromosome 19 (human)
Chromosome 19 (human)
Genomic location for UPF1

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