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for given GO id (and each GO id is has it's own wikidata object). My point is why not to make
Infobox_gene module to request it's name (the line displayed at the top of the box on the wikipedia page) the same way it does with GO ids? This way, by editing one wikidata object, it will be possible to adjust this template for any given language. The same thing should be done with another multilingual param - image description (if we would have any). I think it snould be possible to use the same piece of code, used for getting GO ids from wikidata, for aforementioned params (even if we don't quite understand how does it work). This, and you should probably white an extensive guide on how to edit this new template through the means of wikidata.--
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What I am referring to is the way Gene ontology section works e. g. the gene ontology section will display QID in
Russian wiki if the particular wikidata object have empty field "lable" at the top of the page (where the Language field is). So, If you fill this field in it will display correct phrase
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Which label are you referring to? Wikidata has a mechanism to adapt its interface display of labels and descriptions based on the locale of the user - this is probably how the GO terms are being adapted. If you mean the label of the template itself??? that label wouldn't be in wikidata hence would
1360:
No, thanks. Now that you mentioned wikidata, I got it. But my main problem with this template still stays. You see, I localized your great module for
Russian wikipedia and easily translated it, but the template generated keep displaying it's name on English. Is it possible to do so that the template
1338:
Hi, yes it is possible to change the image. Under the new infobox_gene you will see links to wikidata. The image under the human gene wikidata item will need to be changed/added to include the desired image link. Is there a particular example you are looking at, so that I could go through step by
1315:
Is it possible to create parameters name, image and maybe image description in
Template:Infobox gene so that it would be possible to edit them? Now this parameters are generated automatically and there is now way to change them. This can become a problem because automatically chosen images are not
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not get the same automatic adaptation. On the image front, I think we could probably add the image and image description parameters to allow users to override the defaults coming from wikidata. I think that would be a good idea. The current one image, one item approach is rather limiting. --
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unfortunately at this time I don't have a good way add the image caption as it is not currently in wikidata and will take some restructuring to add to wikidata. It exsits in the wiki commons image description. If you have any ideas on how to access this via a lua module then I could add it.
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I am not familiar with the code, I want all the code containing visible part to reader moved to the top, so maintainer in each language can localize more easily. And when there's major update it's easier to push it to multiple wikis(swapping out the bottom part not containing localization)
1994:
Unfortunately, the part of the code that is used to render the box can't easily be moved to the top as it is dependent on the logic within the function it resides. I tried to organize it so 1. It gets data 2. It gets values from Data. 3. Uses values to create html/wiki code.
2150:. There could be many more: the category takes time to populate, time to empty especially when it’s not the pages but underlying templates and modules that changed. Again, changes to such a highly visible template should really be tested first in its sandbox/with testcases.--
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displays it's own name (label) according to the language of wikipedia it is used in, the same way it displays GO ids? Also, as I said before, it would be nice to have an image description parameter. One more time thank you for your hard work, it's really awesome.--
2173:
It's not my fault this time. The articles you list don't even have wikidata information for this module, and hence should not have this template in them. I surely can add an extra check for chr not to be nil, but there's little point if the module is used this
2001:
Is it possible to define a function at the top of code that returns strings of text to numbers? e.g. f(1)='Available structures' f(22)='Orthologs' f(23)='Species' f(11)='Genetically
Related Diseases'. And whenever there's a need to use these text just call the
1831:
Thanks for the suggestion. That is a nice way to make to the code more concise. Have you gotten an feedback from others on the russian wikipedia about the categories within the templates. One of my categories was reverted see the notes on this edit....
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You can just go to the wikidata page of this item and edit it's lable field, right at the top of the page. Create field for
Chinese language and write down an appropriate translation - then it will be displayed correctly on your language.
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which I periodically check. The problem pages are still listed as the category takes some time to update, in case you want to see the error, and which pages are having problems in case you want a testcase for e.g. testing a sandbox
2255:, so you should take it up with that bot I guess. But it has been added, to that and perhaps dozens or hundreds of pages without data, so it probably should be a test case for it – a page with incomplete or missing data.--
1850:
Haven't gotten any feedback. I think that particular revert was due to Human proteins category having complicated multi-level structure. Chromosome categories, on the other hand, are essentially 1-level, so I think that's
2071:
I reverted the last change to the Module (by an IP but I assume that is you logged out) as it was generating dozens, maybe a hundred, errors on Gene pages, based on it being the only recent change. See the category,
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also, what do these numbers correspond to? The infobox doesn't always display the same information for different genes, so if you are assuming the numbering is top to bottom, left to right that might get
2377:
Hello. I think your suggestions sound good. I have been out of the loop of what the current plans are for the gene infobox, but would be willing to help if you have any lua related questions. Best
2456:. It has the authority to impose binding solutions to disputes between editors, primarily for serious conduct disputes the community has been unable to resolve. This includes the authority to impose
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It might be possible, but generally not good practice to use numbers for function names. Let me see if I can modularize it a little more so the list of all values is closer to the top.
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I updated with a combo of old and new, so now checks for data that looks like chromosome as before (which keeps it from generating errors) and then added the more generic extraction.
2283:
Hello again! Did you think about how we can add localized descriptions for gene's image? It was specifically requested on
Russian wiki. Can you please suggest any solutions? Thanks.--
1484:
in Gene ontology section, if the biological role has no chinese name on wikidata, it will display it's QID. Is it possible to make it fallback to english when there's no chinese data?
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will have some input? I am surprised that the GO ids are translated and will try to see what the mechanism that is at work here. Thanks for input in making the module more usable.
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in
Russian wiki to properly extract chromosome number (trimChromosome) from a wikidata item. It feels more generic, though may not account for all possible errors.--
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If I understand you correctly, then you like all the code contained in the variable "root" at the top of the code. Is this what you had in mind?
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always the best one. Plus makes this module hard to use in other wikipedias, where names of genes or proteins are not written in
English.
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2355:(IUPHAR links, EC links, Making Infobox gene more understandable). I would appreciate your feedback. Thanks.
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I will look into why those pages without wikidata items exist and for the time being the code is reverted.
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which will forward it to the module, and will add/replace a default image/description in the infobox?--
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I have no experience in js so what I am about to suggest might not make any sense. But I'll ask anyway.
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If the maintainer on other wikis wants to update the code they can just switch out the bottom part --
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Lua error in Module:Sandbox/genewiki/generefbox at line 45: assign to undeclared variable 'claims'.
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moving all displayed text to the top of code(as variables?) for easier localization and update
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I support this suggestion. I think all localizeable stuff should be defined in one place.--
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put the articles to corresponding categories based on chromosome they are located on, like
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has a script error, which looks like it’s happening around your last change to
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Thank you for making me aware of this scripting error. It has been corrected.
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Here’s a list of the pages that were generating errrors before I reverted:
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describes the Committee's roles and responsibilities in greater detail.
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are allowed to vote. Users with alternate accounts may only vote once.
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How does your edit deal with those genes on the X and Y chromosome?
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Sure that is a good idea. I will look into how to get these added.
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2481:. If you no longer wish to receive these messages, you may add
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positive regulation of small GTPase mediated signal transduction
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If you wish to participate in the 2019 election, please review
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positive regulation of phosphatidylinositol 3-kinase signaling
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positive regulation of lateral motor column neuron migration
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positive regulation of synaptic transmission, glutamatergic
1806:
First of all, thanks for doing it! Please take a look at
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to request non-expansive interwiki sitelink fetching. --
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positive regulation of CREB transcription factor activity
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is now open until 23:59 on Monday, 2 December 2019. All
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positive regulation of excitatory postsynaptic potential
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positive regulation of peptidyl-tyrosine phosphorylation
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is the panel of editors responsible for conducting the
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Yes, I've just updated the code to account for those.--
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positive regulation of protein tyrosine kinase activity
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Major histocompatibility complex, class II, DQ alpha 1
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positive regulation of long-term synaptic potentiation
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very-low-density lipoprotein particle receptor binding
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positive regulation of dendritic spine morphogenesis
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positive regulation of neuron projection development
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Knowledge (XXG):Bots/Noticeboard#User:ProteinBoxBot
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2094:Yes, it's my fault. I believe I've fixed it.--
890:cell morphogenesis involved in differentiation
850:positive regulation of protein kinase activity
860:positive regulation of AMPA receptor activity
8:
2351:Hi Julia. I have made several proposals at
855:modulation of chemical synaptic transmission
2520:GRCh38: Ensembl release 89: ENSG00000189056
1554:where can I find a full list of used items?
1458:P.S You can see how this works on the page
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1751:Hello. Are there any plans to make
1480:need help with zh wiki localization
2420:ArbCom 2019 election voter message
1339:step to show you how to change it?
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2112:which has (or had) the error:
1462:, which I experimented with.--
623:serine-type peptidase activity
575:More reference expression data
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1288:View/Edit Mouse
1283:View/Edit Human
1246:
1239:
1236:Location (UCSC)
1218:
1193:
1163:
1138:
1051:ENSG00000189056
944:
688:
659:plasma membrane
637:
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178:Gene location (
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790:cell migration
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432:olfactory bulb
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393:
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383:RNA expression
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349:
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344:5 A3|5 9.98 cM
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2250:
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1435:Benjamin Good
1431:
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1418:Benjamin Good
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1145:
1141:
1135:
1131:
1128:
1126:RefSeq (mRNA)
1124:
1117:
1116:
1111:
1107:
1104:
1098:
1097:
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1088:
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1079:
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1027:
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989:
986:
983:
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978:
974:
971:
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963:
956:
952:
947:
941:
940:axon guidance
938:
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933:
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928:
926:
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913:
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836:
833:
831:
828:
826:
823:
821:
818:
816:
813:
811:
808:
806:
805:cell adhesion
803:
801:
798:
796:
793:
791:
788:
786:
783:
781:
778:
776:
773:
771:
768:
766:
763:
761:
758:
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751:
748:
746:
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621:
619:
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614:
611:
609:
606:
605:
603:
600:
599:
596:
595:Gene ontology
592:
588:
576:
571:
567:
562:
559:
557:
553:
545:
540:
529:
525:
521:
517:
514:sciatic nerve
513:
509:
505:
501:
497:
493:
492:
489:
485:
480:
477:
467:
463:
459:
455:
451:
447:
443:
439:
435:
431:
430:
427:
423:
418:
415:
414:
411:
409:
405:
403:
402:
398:
397:
394:
392:
388:
384:
380:
376:
368:
363:
359:
355:
350:
340:
336:
329:
322:
316:
309:
301:
297:
293:
288:
284:
279:
275:
267:
262:
258:
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249:
239:
235:
228:
221:
215:
208:
204:
198:
194:
190:
185:
181:
176:
172:
168:
164:
160:
156:
152:
148:
144:
140:
136:
132:
124:
119:
112:
107:
102:
91:
89:
85:
81:
77:
73:
67:
62:
59:
58:
54:
51:
44:
40:
35:
31:
27:
22:
17:
2579:
2570:
2561:
2552:
2476:
2470:
2447:
2441:
2435:
2396:
2379:Julialturner
2350:
2333:Julialturner
2302:Infobox gene
2296:
2282:
2201:Julialturner
2132:ATP synthase
2070:
2043:Julialturner
2028:Julialturner
1968:Julialturner
1953:Julialturner
1921:
1837:Julialturner
1823:
1802:Julialturner
1798:
1789:Julialturner
1756:Infobox_gene
1750:
1733:Julialturner
1699:The article
1698:
1513:Julialturner
1483:
1439:Julialturner
1411:Julialturner
1392:Julialturner
1356:Julialturner
1341:Julialturner
1314:
1302:
1298:
1220:NP_001297393
1217:
1192:
1169:NM_001310464
1162:
1137:
1113:
1094:
1068:
1049:
1023:
1004:
984:
979:
494:ciliary body
464:tibial nerve
406:
399:
264:103,989,658
251:103,471,381
126:External IDs
69:
2478:voting page
2247:Looking at
2022:Panintelize
2007:Panintelize
1990:Panintelize
1975:Panintelize
1924:Panintelize
1642:getSitelink
1556:Panintelize
1489:Panintelize
715:proteolysis
365:22,549,700
352:22,089,452
104:Identifiers
2547:, May 2017
2526:, May 2017
2462:topic bans
2077:version.--
2041:confusing.
1851:alright.--
1808:what I did
1685:emits crap
1575:Panitelize
1528:Panitelize
1507:Panitelize
410:(ortholog)
147:HomoloGene
2458:site bans
2326:RoadTrain
2309:RoadTrain
2285:RoadTrain
2233:RoadTrain
2195:RoadTrain
2176:RoadTrain
2096:RoadTrain
1939:RoadTrain
1892:RoadTrain
1877:RoadTrain
1868:RoadTrain
1853:RoadTrain
1827:RoadTrain
1812:RoadTrain
1783:RoadTrain
1767:RoadTrain
1630:getEntity
1224:NP_035391
1199:NP_774959
1195:NP_005036
1165:NM_011261
1144:NM_005045
1140:NM_173054
970:Orthologs
649:cytoplasm
155:GeneCards
2593:Category
2002:function
1648:'enwiki'
1624:wikibase
1594:sitelink
1588:wikibase
1272:Wikidata
949:Sources:
795:learning
674:membrane
654:dendrite
2545:Ensembl
2524:Ensembl
2485:NoACEMM
2128:Actinin
1678:Artoria
1674:T148115
1486:example
1082:UniProt
1037:Ensembl
976:Species
955:QuickGO
385:pattern
111:Aliases
2373:Boghog
2357:Boghog
2174:way.--
1258:search
1256:PubMed
1115:Q60841
1096:P78509
992:Entrez
556:BioGPS
243:7q22.1
143:103022
135:600514
2263:deeds
2249:Actin
2158:deeds
2124:Actin
2110:Actin
2085:deeds
1715:deeds
1612:':en'
1386:I9606
1025:19699
985:Mouse
980:Human
951:Amigo
408:Mouse
401:Human
348:Start
283:Mouse
247:Start
180:Human
2495:talk
2448:The
2411:talk
2407:Fram
2383:talk
2361:talk
2337:talk
2322:Hi,
2313:talk
2289:talk
2237:talk
2205:talk
2193:and
2180:talk
2100:talk
2047:talk
2032:talk
2011:talk
1979:talk
1957:talk
1943:talk
1928:talk
1902:talk
1881:talk
1857:talk
1841:talk
1816:talk
1793:talk
1771:talk
1737:talk
1660:'d:'
1560:talk
1539:talk
1517:talk
1493:talk
1468:talk
1450:talk
1437:and
1422:talk
1409:and
1396:talk
1367:talk
1345:talk
1322:talk
1006:5649
506:iris
468:pons
391:Bgee
339:Band
300:Chr.
238:Band
197:Chr.
159:RELN
151:3699
131:OMIM
118:RELN
88:3A7Q
84:2E26
80:2DDU
76:2e26
72:2ddu
53:RCSB
50:PDBe
19:RELN
1765:?--
1681:2e5
1550:Эрг
1535:Эрг
1464:Эрг
1446:Эрг
1407:Эрг
1378:Эрг
1363:Эрг
1334:Эрг
1318:Эрг
361:End
260:End
163:OMA
139:MGI
43:PDB
2595::
2578:.
2560:.
2543:–
2531:^
2522:–
2510:^
2497:)
2487:}}
2483:{{
2460:,
2413:)
2405:.
2385:)
2363:)
2339:)
2315:)
2305:}}
2299:{{
2291:)
2239:)
2227:;
2223:;
2219:;
2215:;
2207:)
2182:)
2146:,
2142:,
2138:,
2134:,
2130:,
2126:,
2102:)
2049:)
2034:)
2013:)
1981:)
1959:)
1945:)
1930:)
1904:)
1883:)
1859:)
1843:)
1818:)
1773:)
1759:}}
1753:{{
1739:)
1666:id
1663:..
1654:or
1651:))
1639:):
1636:id
1618:mw
1615:..
1606:or
1600:id
1582:mw
1562:)
1541:)
1533:--
1519:)
1495:)
1470:)
1452:)
1424:)
1398:)
1369:)
1347:)
1324:)
953:/
367:bp
354:bp
266:bp
253:bp
161:;
157::
153:;
149::
145:;
141::
137:;
133::
86:,
82:,
78:,
74:,
2582:.
2564:.
2493:(
2409:(
2381:(
2375::
2371:@
2359:(
2335:(
2328::
2324:@
2311:(
2287:(
2235:(
2203:(
2197::
2189:@
2178:(
2171::
2167:@
2098:(
2045:(
2030:(
2024::
2020:@
2009:(
1992::
1988:@
1977:(
1970::
1966:@
1955:(
1941:(
1926:(
1900:(
1894::
1890:@
1879:(
1870::
1866:@
1855:(
1839:(
1829::
1825:@
1814:(
1804::
1800:@
1795:)
1791:(
1785::
1781:@
1769:(
1735:(
1729::
1725:@
1669:)
1657:(
1645:(
1633:(
1627:.
1621:.
1609:(
1603:)
1597:(
1591:.
1585:.
1577::
1573:@
1558:(
1552::
1548:@
1537:(
1530::
1526:@
1515:(
1509::
1505:@
1491:(
1466:(
1448:(
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1343:(
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1320:(
285:)
182:)
165::
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