Knowledge (XXG)

VPS45

Source πŸ“

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to vacuoles. This gene is a member of the Sec1 domain family, and shows a high degree of sequence similarity to mouse, rat and yeast Vps45. The exact function of this gene is not known, but its high expression in peripheral blood mononuclear cells suggests a role in trafficking proteins, including
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Rajasekariah P, Eyre HJ, Stanley KK, et al. (1999). "Molecular cloning and characterization of a cDNA encoding the human leucocyte vacuolar protein sorting (h1Vps45)".
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Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library".
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Kim BY, Ueda M, Kominami E, et al. (2004). "Identification of mouse Vps16 and biochemical characterization of mammalian class C Vps complex".
1601:"Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes" 1359:
de Renzis S, SΓΆnnichsen B, Zerial M (2002). "Divalent Rab effectors regulate the sub-compartmental organization and sorting of early endosomes".
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Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides".
931: 241: 938: 218: 1175: 1082: 1061: 1012: 1078: 140: 115: 1057: 57: 1318:"Rabenosyn-5, a novel Rab5 effector, is complexed with hVPS45 and recruited to endosomes through a FYVE finger domain" 254: 153: 247: 146: 1690: 1133:"Mammalian homologues of yeast vacuolar protein sorting (vps) genes implicated in Golgi-to-lysosome trafficking" 1024: 756: 65: 1558:"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)" 737: 1683: 1452: 129: 44: 889: 885: 834: 830: 826: 1384: 89: 1441:"Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences" 914: 893: 859: 838: 1630: 1587: 1544: 1509: 1480: 1427: 1376: 1347: 1304: 1275: 1246: 1211: 1154: 1028: 1016: 37: 1667: 1620: 1612: 1577: 1569: 1534: 1501: 1470: 1460: 1417: 1409: 1368: 1337: 1329: 1296: 1267: 1236: 1203: 1144: 334: 265: 209: 164: 492: 85: 309: 1456: 48:, H1, H1SCN5, VPS45A, VPS45B, VPS54A, VSP45, VSP45A, vacuolar protein sorting 45 homolog 1625: 1600: 1342: 1317: 1582: 1557: 1475: 1440: 1422: 1397: 1300: 1271: 1149: 1132: 626: 621: 616: 611: 606: 590: 585: 580: 575: 570: 565: 560: 555: 539: 534: 1710: 1207: 521: 1663: 1388: 1033: 327: 106: 69: 93: 1118:
National Center for Biotechnology Information, U.S. National Library of Medicine
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National Center for Biotechnology Information, U.S. National Library of Medicine
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plays an important role in segregation of intracellular molecules into distinct
1505: 410: 226: 123: 73: 1523:"Complete sequencing and characterization of 21,243 full-length human cDNAs" 1241: 1224: 1020: 656: 470: 348: 293: 280: 192: 179: 81: 1634: 1591: 1548: 1513: 1484: 1465: 1431: 1413: 1380: 1351: 1308: 1333: 1279: 1250: 1215: 1158: 978: 973: 962: 801: 782: 1176:"Entrez Gene: VPS45 vacuolar protein sorting 45 homolog (S. cerevisiae)" 1616: 1573: 1316:
Nielsen E, Christoforidis S, Uttenweiler-Joseph S, et al. (2000).
994: 768: 723: 946: 678: 1651: 1539: 1522: 1372: 641: 637: 1659: 1225:"Identification of a mammalian Golgi Sec1p-like protein, mVps45" 1001: 501: 61: 1439:
Strausberg RL, Feingold EA, Grouse LH, et al. (2003).
1023:. Genetic studies in yeast have identified more than 40 317: 1671: 1556:
Gerhard DS, Wagner L, Feingold EA, et al. (2004).
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Kimura K, Wakamatsu A, Suzuki Y, et al. (2006).
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Dulubova I, Yamaguchi T, Gao Y, et al. (2002).
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Pevsner J, Hsu SC, Hyde PS, Scheller RH (Feb 1997).
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dentate gyrus of hippocampal formation granule cell
1521:Ota T, Suzuki Y, Nishikawa T, et al. (2004). 1223:Tellam JT, James DE, Stevens TH, Piper RC (1997). 1074: 1072: 1070: 1053: 1051: 1049: 264: 163: 16:Protein-coding gene in the species Homo sapiens 1079:GRCm38: Ensembl release 89: ENSMUSG00000015747 991:Vacuolar protein sorting-associated protein 45 1691: 8: 1058:GRCh38: Ensembl release 89: ENSG00000136631 1698: 1684: 652: 517: 305: 204: 101: 1624: 1581: 1538: 1474: 1464: 1421: 1341: 1240: 1148: 1170: 1168: 1045: 1398:"How Tlg2p/syntaxin 16 'snares' Vps45" 627:vesicle docking involved in exocytosis 18: 269: 230: 225: 168: 127: 122: 7: 1648: 1646: 1670:. You can help Knowledge (XXG) by 904: 875: 849: 816: 792: 773: 747: 728: 702: 683: 487: 405: 343: 322: 14: 997:that in humans is encoded by the 1650: 491: 253: 246: 240: 217: 152: 145: 139: 114: 612:intracellular protein transport 556:integral component of membrane 502:More reference expression data 471:More reference expression data 449:Region I of hippocampus proper 367:right hemisphere of cerebellum 1: 1722:Human chromosome 1 gene stubs 1494:Biochem. Biophys. Res. Commun 1301:10.1016/S1357-2725(99)00017-5 1272:10.1016/S0378-1119(97)00411-3 1150:10.1016/S0378-1119(96)00367-8 238: 137: 1445:Proc. Natl. Acad. Sci. U.S.A 1208:10.1016/0378-1119(94)90802-8 1717:Genes on human chromosome 1 1738: 1645: 1506:10.1016/j.bbrc.2003.10.030 1289:Int. J. Biochem. Cell Biol 622:vesicle-mediated transport 1114:"Mouse PubMed Reference:" 1096:"Human PubMed Reference:" 977: 972: 968: 961: 945: 932:Chr 1: 150.07 – 150.15 Mb 926: 911: 882: 871: 856: 823: 812: 799: 795: 780: 776: 767: 754: 750: 735: 731: 722: 709: 705: 690: 686: 677: 662: 655: 651: 635: 520: 516: 499: 490: 481: 468: 417: 408: 355: 346: 316: 308: 304: 287: 274: 237: 216: 207: 203: 186: 173: 136: 113: 104: 100: 55: 52: 42: 35: 30: 26: 21: 1027:(VPS) genes involved in 1025:vacuolar protein sorting 1242:10.1074/jbc.272.10.6187 939:Chr 3: 95.91 – 95.97 Mb 1466:10.1073/pnas.242603899 1034:inflammatory mediators 421:neural layer of retina 271:3 F2.1|3 41.65 cM 1334:10.1083/jcb.151.3.601 363:cerebellar hemisphere 1414:10.1093/emboj/cdf381 429:facial motor nucleus 371:right adrenal cortex 232:Chromosome 3 (mouse) 130:Chromosome 1 (human) 1457:2002PNAS...9916899M 445:ganglionic eminence 391:left adrenal cortex 375:ganglionic eminence 1658:This article on a 1617:10.1101/gr.4039406 1574:10.1101/gr.2596504 757:ENSMUSG00000015747 600:Biological process 586:cellular component 549:Cellular component 540:molecular function 528:Molecular function 457:supraoptic nucleus 383:left adrenal gland 1679: 1678: 1451:(26): 16899–903. 1029:vesicle transport 988: 987: 984: 983: 957: 956: 922: 921: 901: 900: 867: 866: 846: 845: 808: 807: 789: 788: 763: 762: 744: 743: 718: 717: 699: 698: 647: 646: 617:blood coagulation 607:protein transport 571:endosome membrane 512: 511: 508: 507: 477: 476: 464: 463: 402: 401: 379:cerebellar vermis 359:cerebellar cortex 300: 299: 199: 198: 94:VPS45 - orthologs 1729: 1700: 1693: 1686: 1654: 1647: 1638: 1628: 1595: 1585: 1552: 1542: 1517: 1488: 1478: 1468: 1435: 1425: 1392: 1355: 1345: 1312: 1283: 1254: 1244: 1219: 1180: 1179: 1172: 1163: 1162: 1152: 1128: 1122: 1121: 1110: 1104: 1103: 1092: 1086: 1076: 1065: 1055: 970: 969: 941: 934: 917: 905: 896: 876: 872:RefSeq (protein) 862: 850: 841: 817: 793: 774: 748: 729: 703: 684: 653: 591:synaptic vesicle 518: 504: 495: 488: 473: 413: 411:Top expressed in 406: 351: 349:Top expressed in 344: 323: 306: 296: 283: 272: 257: 250: 244: 233: 221: 205: 195: 182: 171: 156: 149: 143: 132: 118: 102: 96: 47: 40: 19: 1737: 1736: 1732: 1731: 1730: 1728: 1727: 1726: 1707: 1706: 1705: 1704: 1643: 1641: 1598: 1568:(10B): 2121–7. 1555: 1520: 1491: 1438: 1408:(14): 3620–31. 1395: 1358: 1315: 1286: 1266:(1–2): 149–56. 1257: 1235:(10): 6187–93. 1222: 1193: 1189: 1187:Further reading 1184: 1183: 1174: 1173: 1166: 1130: 1129: 1125: 1112: 1111: 1107: 1094: 1093: 1089: 1077: 1068: 1056: 1047: 1042: 1017:protein sorting 1010: 979:View/Edit Mouse 974:View/Edit Human 937: 930: 927:Location (UCSC) 913: 892: 888: 884: 858: 837: 833: 829: 825: 738:ENSG00000136631 631: 595: 566:Golgi apparatus 544: 535:protein binding 500: 469: 460: 455: 451: 447: 443: 441:muscle of thigh 439: 435: 431: 427: 423: 409: 398: 395:Achilles tendon 393: 389: 385: 381: 377: 373: 369: 365: 361: 347: 291: 278: 270: 260: 259: 258: 251: 231: 208:Gene location ( 190: 177: 169: 159: 158: 157: 150: 128: 105:Gene location ( 56: 43: 36: 17: 12: 11: 5: 1735: 1733: 1725: 1724: 1719: 1709: 1708: 1703: 1702: 1695: 1688: 1680: 1677: 1676: 1655: 1640: 1639: 1596: 1553: 1540:10.1038/ng1285 1518: 1489: 1436: 1393: 1373:10.1038/ncb744 1361:Nat. Cell Biol 1356: 1313: 1284: 1255: 1220: 1202:(1–2): 171–4. 1190: 1188: 1185: 1182: 1181: 1164: 1123: 1105: 1087: 1066: 1044: 1043: 1041: 1038: 1009: 1006: 986: 985: 982: 981: 976: 966: 965: 959: 958: 955: 954: 952: 950: 943: 942: 935: 928: 924: 923: 920: 919: 909: 908: 902: 899: 898: 880: 879: 873: 869: 868: 865: 864: 854: 853: 847: 844: 843: 821: 820: 814: 810: 809: 806: 805: 797: 796: 790: 787: 786: 778: 777: 771: 765: 764: 761: 760: 752: 751: 745: 742: 741: 733: 732: 726: 720: 719: 716: 715: 707: 706: 700: 697: 696: 688: 687: 681: 675: 674: 669: 664: 660: 659: 649: 648: 645: 644: 633: 632: 630: 629: 624: 619: 614: 609: 603: 601: 597: 596: 594: 593: 588: 583: 581:Golgi membrane 578: 573: 568: 563: 558: 552: 550: 546: 545: 543: 542: 537: 531: 529: 525: 524: 514: 513: 510: 509: 506: 505: 497: 496: 485: 479: 478: 475: 474: 466: 465: 462: 461: 459: 458: 454: 450: 446: 442: 438: 434: 430: 426: 422: 418: 415: 414: 403: 400: 399: 397: 396: 392: 388: 384: 380: 376: 372: 368: 364: 360: 356: 353: 352: 340: 339: 331: 320: 314: 313: 310:RNA expression 302: 301: 298: 297: 289: 285: 284: 276: 273: 268: 262: 261: 252: 245: 239: 235: 234: 229: 223: 222: 214: 213: 201: 200: 197: 196: 188: 184: 183: 175: 172: 167: 161: 160: 151: 144: 138: 134: 133: 126: 120: 119: 111: 110: 98: 97: 54: 50: 49: 41: 33: 32: 28: 27: 24: 23: 15: 13: 10: 9: 6: 4: 3: 2: 1734: 1723: 1720: 1718: 1715: 1714: 1712: 1701: 1696: 1694: 1689: 1687: 1682: 1681: 1675: 1673: 1669: 1665: 1661: 1656: 1653: 1649: 1644: 1636: 1632: 1627: 1622: 1618: 1614: 1610: 1606: 1602: 1597: 1593: 1589: 1584: 1579: 1575: 1571: 1567: 1563: 1559: 1554: 1550: 1546: 1541: 1536: 1532: 1528: 1524: 1519: 1515: 1511: 1507: 1503: 1500:(3): 577–82. 1499: 1495: 1490: 1486: 1482: 1477: 1472: 1467: 1462: 1458: 1454: 1450: 1446: 1442: 1437: 1433: 1429: 1424: 1419: 1415: 1411: 1407: 1403: 1399: 1394: 1390: 1386: 1382: 1378: 1374: 1370: 1367:(2): 124–33. 1366: 1362: 1357: 1353: 1349: 1344: 1339: 1335: 1331: 1328:(3): 601–12. 1327: 1323: 1319: 1314: 1310: 1306: 1302: 1298: 1295:(6): 683–94. 1294: 1290: 1285: 1281: 1277: 1273: 1269: 1265: 1261: 1256: 1252: 1248: 1243: 1238: 1234: 1230: 1229:J. Biol. Chem 1226: 1221: 1217: 1213: 1209: 1205: 1201: 1197: 1192: 1191: 1186: 1177: 1171: 1169: 1165: 1160: 1156: 1151: 1146: 1143:(1–2): 7–14. 1142: 1138: 1134: 1127: 1124: 1119: 1115: 1109: 1106: 1101: 1097: 1091: 1088: 1084: 1080: 1075: 1073: 1071: 1067: 1063: 1059: 1054: 1052: 1050: 1046: 1039: 1037: 1035: 1030: 1026: 1022: 1018: 1014: 1007: 1005: 1003: 1000: 996: 992: 980: 975: 971: 967: 964: 960: 953: 951: 948: 944: 940: 936: 933: 929: 925: 918: 916: 910: 906: 903: 897: 895: 891: 887: 881: 877: 874: 870: 863: 861: 855: 851: 848: 842: 840: 836: 832: 828: 822: 818: 815: 813:RefSeq (mRNA) 811: 804: 803: 798: 794: 791: 785: 784: 779: 775: 772: 770: 766: 759: 758: 753: 749: 746: 740: 739: 734: 730: 727: 725: 721: 714: 713: 708: 704: 701: 695: 694: 689: 685: 682: 680: 676: 673: 670: 668: 665: 661: 658: 654: 650: 643: 639: 634: 628: 625: 623: 620: 618: 615: 613: 610: 608: 605: 604: 602: 599: 598: 592: 589: 587: 584: 582: 579: 577: 574: 572: 569: 567: 564: 562: 559: 557: 554: 553: 551: 548: 547: 541: 538: 536: 533: 532: 530: 527: 526: 523: 522:Gene ontology 519: 515: 503: 498: 494: 489: 486: 484: 480: 472: 467: 456: 452: 448: 444: 440: 436: 432: 428: 424: 420: 419: 416: 412: 407: 404: 394: 390: 386: 382: 378: 374: 370: 366: 362: 358: 357: 354: 350: 345: 342: 341: 338: 336: 332: 330: 329: 325: 324: 321: 319: 315: 311: 307: 303: 295: 290: 286: 282: 277: 267: 263: 256: 249: 243: 236: 228: 224: 220: 215: 211: 206: 202: 194: 189: 185: 181: 176: 166: 162: 155: 148: 142: 135: 131: 125: 121: 117: 112: 108: 103: 99: 95: 91: 87: 83: 79: 75: 71: 67: 63: 59: 51: 46: 39: 34: 29: 25: 20: 1672:expanding it 1664:chromosome 1 1657: 1642: 1611:(1): 55–65. 1608: 1604: 1565: 1561: 1530: 1526: 1497: 1493: 1448: 1444: 1405: 1401: 1364: 1360: 1325: 1322:J. Cell Biol 1321: 1292: 1288: 1263: 1259: 1232: 1228: 1199: 1195: 1140: 1136: 1126: 1117: 1108: 1099: 1090: 1011: 998: 990: 989: 912: 890:NP_001266283 886:NP_001266282 883: 857: 835:NM_001279355 831:NM_001279354 827:NM_001279353 824: 800: 781: 755: 736: 710: 691: 671: 666: 437:right kidney 333: 326: 191:150,145,329 178:150,067,279 53:External IDs 1533:(1): 40–5. 425:neural tube 292:95,965,778 279:95,907,144 31:Identifiers 1711:Categories 1605:Genome Res 1562:Genome Res 1527:Nat. Genet 1085:, May 2017 1064:, May 2017 1040:References 1021:organelles 337:(ortholog) 74:HomoloGene 1662:on human 1015:mediated 915:NP_038869 894:NP_009190 860:NM_013841 839:NM_007259 657:Orthologs 82:GeneCards 1635:16344560 1592:15489334 1549:14702039 1514:14623309 1485:12477932 1432:12110575 1381:11788822 1352:11062261 1309:10404641 1081:– 1060:– 1008:Function 963:Wikidata 636:Sources: 576:membrane 561:endosome 387:monocyte 1626:1356129 1453:Bibcode 1389:6596498 1343:2185588 1280:9373149 1251:9045632 1216:8125298 1159:8996080 1083:Ensembl 1062:Ensembl 1013:Vesicle 995:protein 769:UniProt 724:Ensembl 663:Species 642:QuickGO 312:pattern 38:Aliases 1633:  1623:  1590:  1583:528928 1580:  1547:  1512:  1483:  1476:139241 1473:  1430:  1423:126126 1420:  1402:EMBO J 1387:  1379:  1350:  1340:  1307:  1278:  1249:  1214:  1157:  949:search 947:PubMed 802:P97390 783:Q9NRW7 679:Entrez 483:BioGPS 170:1q21.2 70:891965 62:610035 1666:is a 1385:S2CID 999:VPS45 993:is a 712:22365 693:11311 672:Mouse 667:Human 638:Amigo 335:Mouse 328:Human 275:Start 210:Mouse 174:Start 107:Human 86:VPS45 45:VPS45 22:VPS45 1668:stub 1660:gene 1631:PMID 1588:PMID 1545:PMID 1510:PMID 1481:PMID 1428:PMID 1377:PMID 1348:PMID 1305:PMID 1276:PMID 1260:Gene 1247:PMID 1212:PMID 1196:Gene 1155:PMID 1137:Gene 1002:gene 453:lens 318:Bgee 266:Band 227:Chr. 165:Band 124:Chr. 78:5250 58:OMIM 1621:PMC 1613:doi 1578:PMC 1570:doi 1535:doi 1502:doi 1498:311 1471:PMC 1461:doi 1418:PMC 1410:doi 1369:doi 1338:PMC 1330:doi 1326:151 1297:doi 1268:doi 1264:200 1237:doi 1233:272 1204:doi 1200:138 1145:doi 1141:183 288:End 187:End 90:OMA 66:MGI 1713:: 1629:. 1619:. 1609:16 1607:. 1603:. 1586:. 1576:. 1566:14 1564:. 1560:. 1543:. 1531:36 1529:. 1525:. 1508:. 1496:. 1479:. 1469:. 1459:. 1449:99 1447:. 1443:. 1426:. 1416:. 1406:21 1404:. 1400:. 1383:. 1375:. 1363:. 1346:. 1336:. 1324:. 1320:. 1303:. 1293:31 1291:. 1274:. 1262:. 1245:. 1231:. 1227:. 1210:. 1198:. 1167:^ 1153:. 1139:. 1135:. 1116:. 1098:. 1069:^ 1048:^ 1036:. 1004:. 640:/ 294:bp 281:bp 193:bp 180:bp 88:; 84:: 80:; 76:: 72:; 68:: 64:; 60:: 1699:e 1692:t 1685:v 1674:. 1637:. 1615:: 1594:. 1572:: 1551:. 1537:: 1516:. 1504:: 1487:. 1463:: 1455:: 1434:. 1412:: 1391:. 1371:: 1365:4 1354:. 1332:: 1311:. 1299:: 1282:. 1270:: 1253:. 1239:: 1218:. 1206:: 1178:. 1161:. 1147:: 1120:. 1102:. 212:) 109:) 92::

Index

Aliases
VPS45
OMIM
610035
MGI
891965
HomoloGene
5250
GeneCards
VPS45
OMA
VPS45 - orthologs
Human
Chromosome 1 (human)
Chr.
Chromosome 1 (human)
Chromosome 1 (human)
Genomic location for VPS45
Genomic location for VPS45
Band
bp
bp
Mouse
Chromosome 3 (mouse)
Chr.
Chromosome 3 (mouse)
Genomic location for VPS45
Genomic location for VPS45
Band
bp

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