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Nucleoside-diphosphate kinase

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nucleoside-diphosphate kinase, serine/threonine-specific protein kinase, geranyl and farnesyl pyrophosphate kinase, histidine protein kinase, and 3'-5' exonuclease activities. Its processes are involved with cell proliferation, differentiation and development, and gene expression in human cells. It is also part of the neural development process, which includes neural patterning and cell fate determination. Furthermore, NDPK is involved with the signal transduction processes and G protein-coupled receptor endocytosis as it transfers a phosphate group onto the G ÎČ-subunits and convert GDP to GTP. This increase in GTP concentration near G protein α-subunits causes activation of G protein α-subunits for G-protein signaling. In addition to signaling, NDPK is involved in controlling K+ channels, cell secretion, and cellular energy production.
507:((p)ppGpp) molecule. (p)ppGpp biosynthesis is a part of the purine metabolism pathway and coordinates a series of cellular activities in response to nutritional abundances. Synthesis of (p)ppGpp is triggered by carbon starvation, or the lack of carbon in the cell's environment, and causes the protein SpoT to activate. SpoT works in conjunction with NDPK and both serve as essential enzymes in the (p)ppGpp biosynthesis cycle. NDPK synthesizes the formation of GDP from GTP via dephosphorylation. 573:
responses in plants. Type II NDPK is concentrated in the chloroplast and it is believed to be involved in the photosynthesis process and the oxidative stress management, but its function is not yet known clearly. Type III NDPK targets both mitochondria and chloroplast, and it is mainly involved in energy metabolism. The localization and exact function of the type IV NDPK is not yet well known and needs further investigations. In addition, NDPK is associated with H
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suppressor protein and its gene Nm23 was less activated in metastatic cells. In a different experiment, human Nm23 was cultured with cancer cells and showed inhibition of metastasis. The level of NM23 protein was inversely proportional to the metastatic potential for human solid tumors. However, other tumor types such as ovarian cancers,
253:. Many NDP serve as acceptor while NTP are donors of phosphate group. The general reaction via ping-pong mechanism is as follows: XDP + YTP ←→ XTP + YDP (X and Y each represent different nitrogenous base). NDPK activities maintain an equilibrium between the concentrations of different nucleoside triphosphates such as, for example, when 427:. To be more specific, NDPK supports the production of nucleotides in high-energy and low-stress cellular states. However, this can only happen when AMPK is inactivated because low-stress cellular states of ATP triggers the activation of AMPK, which eventually decreases NDPK activity by phosphorylating serine residues. 463:. Nucleoside diphosphate kinase activity involves the transfer of the γ-phosphate of nucleoside triphosphate (NTP) to nucleoside diphosphate (NDP), where N1 and N2 can be ribo- or deoxyribonucleosides. This is done via a high energy phosphohistidine intermediate. Besides involvement in the synthesis of 633:
cells. Also, the transfection of Nme1 into a highly metastatic melanoma line significantly reduced metastasis. This theory has been tested with mice as well; the Nme1-deficient mice formed greater lung metastases than wild type mice, showing that this gene has suppressing activity. Invasion of cancer
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There was a lot of debate on whether NM23 gene is responsible for suppressing or activating metastasis. The two contradicting sides on this subject remained ambiguous and undefined throughout the course of NDPK studies. However, recent experiments began to show evidence for NM23 being a suppressor of
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code for the proteins NDPKs, which are separated into two groups. The first group encodes proteins with NDPK functions. The other group genes code for other various proteins that display low or no NDPK activities. In the first group, one of the genes named NM23 was identified as the first metastasis
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The biochemical reactions catalyzed by NDP kinase in plants are analogous to activities described in humans as autophosphorylation activity takes place from ATP and GTP. In addition to this, plants have four types of NDPK isoforms. Cytosolic type I NDPK is involved in metabolism, growth, and stress
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There are at least four enzymatically active isoforms of NDPK in humans: NDPK-A, NDPK-B, NDPK-C and NDPK-D. All four isoforms have very similar structures and can combine in any form to become functional NDPK hexamers. NDPK is suggested to participate in transmembrane signaling in eukaryotic cells.
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functions. Nme2 gene is known to form a complex with the beta subunit of the heterotrimetric G protein in heart cells and regulates the contractility of heart. There are two functions of Nme2 that allow for such regulation; one is the histidine kinase activity, which is the phosphorylation of the
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In Eukaryotic systems, the role of the NDK is to synthesize nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate, and synthesize products such as UTP. NDK possesses
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activated from receptor binding; once ATP donates a phosphate group via activity of NDPK, GTP is consecutively bound. Increased activity of membrane-associated NDPK yields cAMP synthesis. NDPK controls K+ channels, G proteins, cell secretion, cellular energy production, and UTP synthesis.
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residue by transferring terminal phosphate group (Îł-phosphate) from ATP to NDP ÎČ-phosphate in order to produce a NTP, and NDPK catalyzes such reversible reactions. NTP phosphorylates a histidine, which in turn phosphorylates NDP. NDPK are involved in the synthesis of
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While the biomolecular mechanism by which the Nm23 gene works in cells is currently unknown, like in most prokaryotes, nucleoside diphosphate kinase (NDPK) expression levels determine cell growth and differentiation. Normally, the Nm23 gene (NME) is involved in
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NDPK usually consumes ATP, the most abundant cellular nucleotide, and stores the nucleotides. However, consumption of ATP would definitely influence the cellular energy balance, which brings upon the regulation of AMP-activated protein kinase
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events, EMT hallmarks, and other transcriptional programs that have been linked to the Nme1 proteins. These proteins go about interrupting metastasis by binding metastasis-promoting proteins. The Nme1 proteins bind to viral proteins,
616:. The depletion of Nme2/caveolin interaction exhibited a decreased rate of cardiac contractility. Furthermore, more studies with zebra fish revealed that the NDPK depletion has a detrimental effect on heart functioning. 2765: 598:
and hematological malignancies displayed upregulated NM23 levels in patient samples. Therefore, understanding the biological basis of the Nm23 gene family is necessary to have a firm knowledge of its diverse results.
1405:"Nucleoside diphosphate kinase (NDPK, NM23, AWD): recent regulatory advances in endocytosis, metastasis, psoriasis, insulin release, fetal erythroid lineage and heart failure; translational medicine exemplified" 2775: 1354:"Progress on Nme (NDP kinase/Nm23/Awd) gene family-related functions derived from animal model systems: studies on development, cardiovascular disease, and cancer metastasis exemplified" 2770: 1647: 1556: 2890: 2868: 423:). AMPK acts as the energy sensor and regulates ATP pathways by turning the generating pathways or not. Because of such activity, AMPK could directly inhibit NDPK through 1113:
de la Rosa A, Williams RL, Steeg PS (January 1995). "Nm23/nucleoside diphosphate kinase: toward a structural and biochemical understanding of its biological functions".
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as substrates or donors. Therefore, NDPK is the source of RNA and DNA precursors, except ATP. NDPK utilize specific enzyme kinetics for multi-substrate reaction, namely
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NDPK are homohexameric proteins made up of monomers approximately 152 amino acids long with a theoretical weight of 17.17KDa. The complex is found in
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Moon H, Lee B, Choi G, Shin D, Prasad DT, Lee O, Kwak SS, Kim DH, Nam J, Bahk J, Hong JC, Lee SY, Cho MJ, Lim CO, Yun DJ (January 2003).
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suppression in humans. In prokaryotes, the Nm23 gene is involved in normal cell development and differentiation. Highly conserved
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Behind this apparently simple reaction is a multistep mechanism. The key steps of transphosphorylation are as follows:
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nucleotides, prokaryotic NDPK is also involved in several metabolism cycles. NDPK has also been discovered to act as a
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NDPK's roles in these NTPs differ; generally, kinases bring in NTPs for nucleic acid synthesis. CTP is provided for
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have been closed and characterized as a nucleoside diphosphate kinase (ndk gene) and seems to be essential for
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Dumas C, Lascu I, Moréra S, Glaser P, Fourme R, Wallet V, Lacombe ML, Véron M, Janin J (September 1992).
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In the (p)ppGpp biosynthesis cycle, NDPK serves an important role. When there is an absence of a charged
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Each step is part of a reversible process, such that the multistep equilibrium is of the following form.
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Crystal structure of NDPK in human, viewed from front and side, respectively: X-ray diffraction, 2.2 Å
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Attwood PV, Wieland T (February 2015). "Nucleoside diphosphate kinase as protein histidine kinase".
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development, nucleoside diphosphate kinase activity has also been shown to drastically decrease.
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channels to regulate what goes through and the other is a scaffold function of the formation of
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metastasis. Nme2 was tagged as an anti-metastasis gene, using the tissue chip technology and
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occurs due to changes in cell adhesion and it is caused by gene expression changes in the
424: 385: 318: 278: 110: 852:"NME1 - Nucleoside diphosphate kinase A - Homo sapiens (Human) - NME1 gene & protein" 400:-mediated signal transduction, NDPK is responsible for phosphorylating GDP released from 1472: 1380: 1353: 1310: 86: 3242: 3131: 3072: 2811: 2650: 2557: 2549: 2426: 2389: 1952: 1882: 1845: 1491: 1456: 1429: 1404: 1217: 1200: 968: 943: 819: 608: 389: 169: 45: 1329: 919: 902: 828: 803: 748:"PDB 1jxv structure summary â€č Protein Data Bank in Europe (PDBe) â€č EMBL-EBI" 486:
NDPK is the enzyme triggering the dephosphorylation of GTP to GDP in the ppGpp cycle.
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Dorion S, Rivoal J (February 2015). "Clues to the functions of plant NDPK isoforms".
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Phosphoryl group is transferred from NDPK-His to NDP2 or dNDP2, creating a bound NTP2
265:(ATP). Other activities include cell proliferation, differentiation and development, 1455:
Liu YF, Yang A, Liu W, Wang C, Wang M, Zhang L, Wang D, Dong JF, Li M (2015-01-01).
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Otero AS (June 2000). "NM23/nucleoside diphosphate kinase and signal transduction".
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From Metabolite, to Metabolism, to Metabolon: Current Topics in Cellular Regulation
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Onyenwoke RU, Forsberg LJ, Liu L, Williams T, Alzate O, Brenman JE (January 2012).
496: 460: 439:. It has been reported in a number of pathogens. NDPK function has been studied in 345: 290: 301:
NDPK are found in all cells, displaying not much specificity towards the types of
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Proceedings of the National Academy of Sciences of the United States of America
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Lutz S, Mura R, Baltus D, Movsesian M, KĂŒbler W, Niroomand F (January 2001).
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A phosphoryl group from NTP1 is transferred to His in active site of NDPK
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of the Nm23 gene have been found in prokaryotes, more specifically,
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CDP-diacylglycerol—glycerol-3-phosphate 3-phosphatidyltransferase
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Initially bound NDP1 is released from NDPK bringing in new NDP2
503:, the ribosome will stall and trigger the synthesis of the 2935: 638:(EMT). Surprisingly, there are many adhesion molecules, 1648:
Phosphoribosylaminoimidazolesuccinocarboxamide synthase
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synthesis while GTP is used for protein elongation and
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Nme2, one of the NDPK genes, has been associated with
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CDP-diacylglycerol—inositol 3-phosphatidyltransferase
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Hsu T, Steeg PS, Zollo M, Wieland T (February 2015).
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the exchange of terminal phosphate between different
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CDP-diacylglycerol—choline O-phosphatidyltransferase
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CDP-diacylglycerol—serine O-phosphatidyltransferase
2758: 2748: 2718: 2700: 2677: 2649: 2548: 2388: 2379: 2356: 2316: 2261: 2238: 2210: 2044: 2020: 1933: 1895: 1819: 1810: 1770: 1747: 1702: 1661: 1604: 1597: 1588: 192: 180: 168: 163: 140: 128: 116: 104: 92: 80: 68: 63: 51: 39: 34: 29: 804:"X-ray structure of nucleoside diphosphate kinase" 715: 380:NDPK + NTP ↔ NDPK~NTP ↔ NDPK-P~NDP ↔ NDPK-P + NDP 1086:Lengeler J, Drews G, Schlegel H (10 July 2009). 1757:Hypoxanthine-guanine phosphoribosyltransferase 1358:Naunyn-Schmiedeberg's Archives of Pharmacology 1249:Naunyn-Schmiedeberg's Archives of Pharmacology 1020:Naunyn-Schmiedeberg's Archives of Pharmacology 2951: 1989: 1550: 8: 2797:N-acetylglucosamine-1-phosphate transferase 2687:UTP—glucose-1-phosphate uridylyltransferase 1633:Phosphoribosylglycinamide formyltransferase 778:"Nucleoside diphosphate kinase (IPR001564)" 620:Nme1 and Nme2 as a suppressor of metastasis 2958: 2944: 2936: 2825: 2755: 2385: 2376: 2041: 1996: 1982: 1974: 1823: 1816: 1601: 1594: 1557: 1543: 1535: 160: 2891:serine/threonine-specific protein kinases 2869:serine/threonine-specific protein kinases 2692:Galactose-1-phosphate uridylyltransferase 1519:at the U.S. National Library of Medicine 1490: 1480: 1428: 1379: 1369: 1328: 1318: 1216: 1158:Journal of Bioenergetics and Biomembranes 967: 918: 827: 1643:Phosphoribosylaminoimidazole carboxylase 481: 435:In most prokaryotes, the NDPK enzyme is 344: 249:(NTP) in a reversible manner to produce 18: 3233: 714:Berg JM, Tymoczko JL, Stryer L (2002). 706: 293:and in the soluble cytoplasm of cells. 1199:Engelhardt S, Rochais F (April 2007). 691:Thymidine kinase in clinical chemistry 459:. Prokaryotic NDPK forms a functional 26: 1450: 1448: 1403:Mehta A, Orchard S (September 2009). 1242: 1240: 1238: 1236: 534:soil bacteria. Homologues of Nm23 in 342:(UTP), thymidine triphosphate (TTP). 7: 1866:Orotidine 5'-phosphate decarboxylase 991:Stadtman ER, Chock PB (2014-06-28). 880:. UK: Wiley Blackwell. p. 110. 772: 770: 768: 363:Phosphoenzyme intermediate is formed 349:Ping-pong mechanism utilized by NDPK 1409:Molecular and Cellular Biochemistry 878:Metabolism at a Glance, 4th edition 722:. WH Freeman and Company. pp.  317:. A ping-pong mechanism integrates 305:bases and are capable of accepting 1218:10.1161/01.RES.0000266971.15127.e8 820:10.1002/j.1460-2075.1992.tb05397.x 14: 2202:Glucose-1,6-bisphosphate synthase 1762:Adenine phosphoribosyltransferase 636:epithelial-mesenchymal transition 3236: 2343:Ribose-phosphate diphosphokinase 1870:Uridine monophosphate synthetase 1623:Ribose-phosphate diphosphokinase 1903:Dihydropyrimidine dehydrogenase 1836:Carbamoyl phosphate synthase II 1783:Purine nucleoside phosphorylase 1841:Aspartate carbamoyltransferase 1628:Amidophosphoribosyltransferase 211:Nucleoside-diphosphate kinases 1: 2916:Protein-histidine tele-kinase 2911:Protein-histidine pros-kinase 2790:Glycosyl-1-phosphotransferase 1948:Nucleoside-diphosphate kinase 1638:AIR synthetase (FGAM cyclase) 1517:Nucleoside-Diphosphate+Kinase 948:Molecular Biology of the Cell 920:10.1016/S0008-6363(00)00222-4 30:Nucleoside-diphosphate kinase 2622:RNA-dependent RNA polymerase 1861:Dihydroorotate dehydrogenase 1482:10.1371/journal.pone.0115968 2529:RNA-directed DNA polymerase 2397:DNA-directed DNA polymerase 3280: 2882:: protein-dual-specificity 1089:Biology of the Prokaryotes 454:, Microccocus luteus, and 372:NDPK releases the new NTP2 271:G protein-coupled receptor 231:nucleoside diphosphokinase 3114:Michaelis–Menten kinetics 1878: 1856: 1826: 1677:Adenylosuccinate synthase 1421:10.1007/s11010-009-0114-5 1371:10.1007/s00210-014-1079-9 1261:10.1007/s00210-014-1009-x 1092:. John Wiley & Sons. 1032:10.1007/s00210-014-1003-3 259:citric acid (Krebs) cycle 159: 3006:Diffusion-limited enzyme 2859:protein-serine/threonine 2759:Phosphatidyltransferases 2348:Thiamine diphosphokinase 1943:Ribonucleotide reductase 1521:Medical Subject Headings 671:Nucleoside monophosphate 585:Diseases related to NDPK 505:guanosine pentaphosphate 469:protein histidine kinase 328:nucleoside triphosphates 251:nucleotide triphosphates 1963:Dihydrofolate reductase 1170:10.1023/A:1005589029959 960:10.1091/mbc.E11-08-0699 907:Cardiovascular Research 676:Nucleoside triphosphate 243:nucleoside diphosphates 2679:Nucleotidyltransferase 2362:nucleotidyltransferase 2289:Nucleoside-diphosphate 1682:Adenylosuccinate lyase 1320:10.1073/pnas.252641899 1127:10.1002/bies.950170111 642:, signaling pathways, 603:Cardiovascular disease 487: 452:Salmonella typhimurium 350: 332:guanosine triphosphate 263:adenosine triphosphate 257:(GTP) produced in the 255:guanosine triphosphate 24: 3099:Eadie–Hofstee diagram 3032:Allosteric regulation 2533:Reverse transcriptase 1917:Beta-ureidopropionase 1812:Pyrimidine metabolism 1572:amino acid metabolism 485: 348: 336:cytidine triphosphate 22: 3109:Lineweaver–Burk plot 2322:diphosphotransferase 2304:Thiamine-diphosphate 2011:-containing groups ( 1958:Thymidylate synthase 1935:Deoxyribonucleotides 1205:Circulation Research 876:Salway, J.G (2017). 696:Thymidylate synthase 627:immunohistochemistry 357:NDPK binds to a NTP1 340:uridine triphosphate 311:deoxyribonucleotides 2904:: protein-histidine 2822:; protein acceptor) 2710:mRNA capping enzyme 2702:Guanylyltransferase 1908:Dihydropyrimidinase 1778:Adenosine deaminase 1473:2015PLoSO..1015968L 1311:2003PNAS..100..358M 499:in the A site of a 491:(p)ppGpp metabolism 431:Prokaryotic systems 394:signal transduction 315:ping-pong mechanism 267:signal transduction 3068:Enzyme superfamily 3001:Enzyme promiscuity 2180:Phosphoinositide 3 2024:phosphotransferase 1749:Nucleotide salvage 718:Biochemistry - 5th 686:Thymidylate kinase 550:Eukaryotic systems 527:Myxococcus xanthus 511:Nm23 gene function 488: 456:Myxococcus xanthus 414:Inhibition by AMPK 351: 227:nucleotide kinases 25: 3224: 3223: 2933: 2932: 2929: 2928: 2805: 2804: 2744: 2743: 2645: 2644: 2558:Template-directed 2312: 2311: 2279:Phosphomevalonate 1971: 1970: 1929: 1928: 1891: 1890: 1806: 1805: 1788:Guanine deaminase 1743: 1742: 1718:IMP dehydrogenase 1590:Purine metabolism 733:978-0-7167-4684-3 448:Bacillus subtilis 208: 207: 204: 203: 123:metabolic pathway 3271: 3241: 3240: 3232: 3104:Hanes–Woolf plot 3047:Enzyme activator 3042:Enzyme inhibitor 3016:Enzyme catalysis 2960: 2953: 2946: 2937: 2921:Histidine kinase 2844:tyrosine kinases 2834:protein-tyrosine 2826: 2756: 2563:RNA polymerase I 2386: 2377: 2230:Aspartate kinase 2225:Phosphoglycerate 2042: 1998: 1991: 1984: 1975: 1824: 1817: 1793:Xanthine oxidase 1711: 1670: 1616: 1602: 1595: 1559: 1552: 1545: 1536: 1505: 1504: 1494: 1484: 1452: 1443: 1442: 1432: 1400: 1394: 1393: 1383: 1373: 1349: 1343: 1342: 1332: 1322: 1296: 1287: 1281: 1280: 1244: 1231: 1230: 1220: 1196: 1190: 1189: 1153: 1147: 1146: 1110: 1104: 1103: 1083: 1077: 1076: 1074: 1072: 1058: 1052: 1051: 1015: 1009: 1008: 988: 982: 981: 971: 939: 933: 932: 922: 898: 892: 891: 873: 867: 866: 864: 862: 848: 842: 841: 831: 808:The EMBO Journal 799: 793: 792: 790: 788: 774: 763: 762: 760: 758: 744: 738: 737: 721: 711: 681:Thymidine kinase 640:motility factors 591:paralogous genes 542:growth. During 442:Escherichia coli 261:is converted to 161: 27: 16:Class of enzymes 3279: 3278: 3274: 3273: 3272: 3270: 3269: 3268: 3249: 3248: 3247: 3235: 3227: 3225: 3220: 3132:Oxidoreductases 3118: 3094:Enzyme kinetics 3082: 3078:List of enzymes 3051: 3020: 2991:Catalytic triad 2969: 2964: 2934: 2925: 2896: 2874: 2849: 2820: 2814: 2810:2.7.10-2.7.13: 2801: 2785: 2752:: miscellaneous 2740: 2714: 2696: 2673: 2656:exoribonuclease 2653: 2641: 2627:Polyadenylation 2544: 2370: 2364: 2352: 2334: 2330: 2324: 2308: 2270: 2257: 2234: 2206: 2036: 2030: 2022: 2016: 2002: 1972: 1967: 1925: 1887: 1874: 1852: 1802: 1766: 1739: 1703: 1698: 1662: 1657: 1605: 1584: 1563: 1513: 1508: 1467:(2): e0115968. 1454: 1453: 1446: 1402: 1401: 1397: 1351: 1350: 1346: 1294: 1289: 1288: 1284: 1246: 1245: 1234: 1198: 1197: 1193: 1155: 1154: 1150: 1112: 1111: 1107: 1100: 1085: 1084: 1080: 1070: 1068: 1066:www.uniprot.org 1060: 1059: 1055: 1017: 1016: 1012: 1005: 990: 989: 985: 941: 940: 936: 900: 899: 895: 888: 875: 874: 870: 860: 858: 856:www.uniprot.org 850: 849: 845: 801: 800: 796: 786: 784: 776: 775: 766: 756: 754: 746: 745: 741: 734: 713: 712: 708: 704: 657: 622: 605: 587: 580: 576: 570: 561: 552: 513: 493: 433: 425:phosphorylation 416: 411: 386:lipid synthesis 330:(NTP), such as 319:phosphorylation 299: 287: 279:gene expression 17: 12: 11: 5: 3277: 3275: 3267: 3266: 3261: 3251: 3250: 3246: 3245: 3222: 3221: 3219: 3218: 3205: 3192: 3179: 3166: 3153: 3140: 3126: 3124: 3120: 3119: 3117: 3116: 3111: 3106: 3101: 3096: 3090: 3088: 3084: 3083: 3081: 3080: 3075: 3070: 3065: 3059: 3057: 3056:Classification 3053: 3052: 3050: 3049: 3044: 3039: 3034: 3028: 3026: 3022: 3021: 3019: 3018: 3013: 3008: 3003: 2998: 2993: 2988: 2983: 2977: 2975: 2971: 2970: 2965: 2963: 2962: 2955: 2948: 2940: 2931: 2930: 2927: 2926: 2924: 2923: 2918: 2913: 2907: 2905: 2898: 2897: 2895: 2894: 2885: 2883: 2876: 2875: 2873: 2872: 2863: 2861: 2851: 2850: 2848: 2847: 2838: 2836: 2823: 2818: 2812:protein kinase 2807: 2806: 2803: 2802: 2800: 2799: 2793: 2791: 2787: 2786: 2784: 2783: 2778: 2773: 2768: 2762: 2760: 2753: 2746: 2745: 2742: 2741: 2739: 2738: 2733: 2722: 2720: 2716: 2715: 2713: 2712: 2706: 2704: 2698: 2697: 2695: 2694: 2689: 2683: 2681: 2675: 2674: 2672: 2671: 2666: 2660: 2658: 2651:Phosphorolytic 2647: 2646: 2643: 2642: 2640: 2639: 2634: 2629: 2624: 2619: 2618: 2617: 2612: 2607: 2597: 2596: 2595: 2585: 2580: 2575: 2570: 2565: 2560: 2554: 2552: 2550:RNA polymerase 2546: 2545: 2543: 2542: 2541: 2540: 2530: 2526: 2525: 2524: 2523: 2518: 2513: 2502: 2501: 2500: 2495: 2490: 2485: 2474: 2468: 2467: 2466: 2459: 2454: 2449: 2444: 2433: 2432: 2431: 2424: 2419: 2414: 2409: 2398: 2394: 2392: 2390:DNA polymerase 2383: 2374: 2368: 2354: 2353: 2351: 2350: 2345: 2339: 2337: 2332: 2328: 2314: 2313: 2310: 2309: 2307: 2306: 2301: 2296: 2291: 2286: 2281: 2275: 2273: 2268: 2259: 2258: 2256: 2255: 2249: 2247: 2236: 2235: 2233: 2232: 2227: 2221: 2219: 2208: 2207: 2205: 2204: 2199: 2194: 2193: 2192: 2187: 2177: 2175:Diacylglycerol 2172: 2167: 2162: 2157: 2152: 2147: 2142: 2137: 2136: 2135: 2125: 2120: 2115: 2114: 2113: 2108: 2103: 2098: 2093: 2086:Phosphofructo- 2083: 2078: 2077: 2076: 2066: 2061: 2055: 2053: 2039: 2034: 2018: 2017: 2003: 2001: 2000: 1993: 1986: 1978: 1969: 1968: 1966: 1965: 1960: 1955: 1953:DCMP deaminase 1950: 1945: 1939: 1937: 1931: 1930: 1927: 1926: 1924: 1923: 1914: 1905: 1899: 1897: 1893: 1892: 1889: 1888: 1886: 1885: 1883:CTP synthetase 1879: 1876: 1875: 1873: 1872: 1863: 1857: 1854: 1853: 1851: 1850: 1849: 1848: 1846:Dihydroorotase 1843: 1838: 1827: 1821: 1814: 1808: 1807: 1804: 1803: 1801: 1800: 1795: 1790: 1785: 1780: 1774: 1772: 1768: 1767: 1765: 1764: 1759: 1753: 1751: 1745: 1744: 1741: 1740: 1738: 1737: 1736: 1735: 1725: 1720: 1714: 1712: 1700: 1699: 1697: 1696: 1695: 1694: 1684: 1679: 1673: 1671: 1659: 1658: 1656: 1655: 1650: 1645: 1640: 1635: 1630: 1625: 1619: 1617: 1599: 1592: 1586: 1585: 1583: 1582: 1574: 1564: 1562: 1561: 1554: 1547: 1539: 1533: 1532: 1524: 1512: 1511:External links 1509: 1507: 1506: 1444: 1395: 1344: 1282: 1232: 1211:(8): 1109–11. 1191: 1148: 1105: 1098: 1078: 1053: 1010: 1003: 983: 934: 893: 886: 868: 843: 794: 764: 739: 732: 705: 703: 700: 699: 698: 693: 688: 683: 678: 673: 668: 663: 656: 653: 621: 618: 609:cardiovascular 604: 601: 586: 583: 578: 574: 569: 566: 560: 557: 551: 548: 512: 509: 492: 489: 432: 429: 415: 412: 410: 407: 390:polysaccharide 382: 381: 374: 373: 370: 367: 364: 361: 358: 298: 295: 286: 283: 206: 205: 202: 201: 196: 190: 189: 184: 178: 177: 172: 166: 165: 157: 156: 145: 138: 137: 132: 126: 125: 120: 114: 113: 108: 102: 101: 96: 90: 89: 84: 78: 77: 72: 66: 65: 61: 60: 55: 49: 48: 43: 37: 36: 32: 31: 15: 13: 10: 9: 6: 4: 3: 2: 3276: 3265: 3262: 3260: 3257: 3256: 3254: 3244: 3239: 3234: 3230: 3216: 3212: 3211: 3206: 3203: 3199: 3198: 3193: 3190: 3186: 3185: 3180: 3177: 3173: 3172: 3167: 3164: 3160: 3159: 3154: 3151: 3147: 3146: 3141: 3138: 3134: 3133: 3128: 3127: 3125: 3121: 3115: 3112: 3110: 3107: 3105: 3102: 3100: 3097: 3095: 3092: 3091: 3089: 3085: 3079: 3076: 3074: 3073:Enzyme family 3071: 3069: 3066: 3064: 3061: 3060: 3058: 3054: 3048: 3045: 3043: 3040: 3038: 3037:Cooperativity 3035: 3033: 3030: 3029: 3027: 3023: 3017: 3014: 3012: 3009: 3007: 3004: 3002: 2999: 2997: 2996:Oxyanion hole 2994: 2992: 2989: 2987: 2984: 2982: 2979: 2978: 2976: 2972: 2968: 2961: 2956: 2954: 2949: 2947: 2942: 2941: 2938: 2922: 2919: 2917: 2914: 2912: 2909: 2908: 2906: 2903: 2899: 2893: 2892: 2887: 2886: 2884: 2881: 2877: 2871: 2870: 2865: 2864: 2862: 2860: 2856: 2852: 2846: 2845: 2840: 2839: 2837: 2835: 2831: 2827: 2824: 2821: 2813: 2808: 2798: 2795: 2794: 2792: 2788: 2782: 2779: 2777: 2774: 2772: 2769: 2767: 2764: 2763: 2761: 2757: 2754: 2751: 2747: 2737: 2734: 2731: 2727: 2724: 2723: 2721: 2717: 2711: 2708: 2707: 2705: 2703: 2699: 2693: 2690: 2688: 2685: 2684: 2682: 2680: 2676: 2670: 2667: 2665: 2662: 2661: 2659: 2657: 2652: 2648: 2638: 2635: 2633: 2630: 2628: 2625: 2623: 2620: 2616: 2613: 2611: 2608: 2606: 2603: 2602: 2601: 2598: 2594: 2591: 2590: 2589: 2586: 2584: 2581: 2579: 2576: 2574: 2571: 2569: 2566: 2564: 2561: 2559: 2556: 2555: 2553: 2551: 2547: 2539: 2536: 2535: 2534: 2531: 2528: 2527: 2522: 2519: 2517: 2514: 2512: 2509: 2508: 2506: 2503: 2499: 2496: 2494: 2491: 2489: 2486: 2484: 2481: 2480: 2478: 2475: 2472: 2469: 2465: 2464: 2460: 2458: 2455: 2453: 2450: 2448: 2445: 2443: 2440: 2439: 2437: 2434: 2430: 2429: 2425: 2423: 2420: 2418: 2415: 2413: 2410: 2408: 2405: 2404: 2402: 2399: 2396: 2395: 2393: 2391: 2387: 2384: 2382: 2378: 2375: 2372: 2363: 2359: 2355: 2349: 2346: 2344: 2341: 2340: 2338: 2335: 2323: 2319: 2315: 2305: 2302: 2300: 2297: 2295: 2292: 2290: 2287: 2285: 2282: 2280: 2277: 2276: 2274: 2271: 2264: 2260: 2254: 2251: 2250: 2248: 2245: 2241: 2237: 2231: 2228: 2226: 2223: 2222: 2220: 2217: 2213: 2209: 2203: 2200: 2198: 2195: 2191: 2190:Class II PI 3 2188: 2186: 2183: 2182: 2181: 2178: 2176: 2173: 2171: 2168: 2166: 2165:Deoxycytidine 2163: 2161: 2158: 2156: 2153: 2151: 2148: 2146: 2143: 2141: 2138: 2134: 2133:ADP-thymidine 2131: 2130: 2129: 2126: 2124: 2121: 2119: 2116: 2112: 2109: 2107: 2104: 2102: 2099: 2097: 2094: 2092: 2089: 2088: 2087: 2084: 2082: 2079: 2075: 2072: 2071: 2070: 2067: 2065: 2062: 2060: 2057: 2056: 2054: 2051: 2047: 2043: 2040: 2037: 2029: 2025: 2019: 2014: 2010: 2006: 1999: 1994: 1992: 1987: 1985: 1980: 1979: 1976: 1964: 1961: 1959: 1956: 1954: 1951: 1949: 1946: 1944: 1941: 1940: 1938: 1936: 1932: 1922: 1918: 1915: 1913: 1909: 1906: 1904: 1901: 1900: 1898: 1894: 1884: 1881: 1880: 1877: 1871: 1867: 1864: 1862: 1859: 1858: 1855: 1847: 1844: 1842: 1839: 1837: 1834: 1833: 1832: 1829: 1828: 1825: 1822: 1818: 1815: 1813: 1809: 1799: 1798:Urate oxidase 1796: 1794: 1791: 1789: 1786: 1784: 1781: 1779: 1776: 1775: 1773: 1769: 1763: 1760: 1758: 1755: 1754: 1752: 1750: 1746: 1734: 1733:GMP reductase 1731: 1730: 1729: 1726: 1724: 1721: 1719: 1716: 1715: 1713: 1710: 1708: 1701: 1693: 1692:AMP deaminase 1690: 1689: 1688: 1685: 1683: 1680: 1678: 1675: 1674: 1672: 1669: 1667: 1660: 1654: 1651: 1649: 1646: 1644: 1641: 1639: 1636: 1634: 1631: 1629: 1626: 1624: 1621: 1620: 1618: 1615: 1613: 1609: 1603: 1600: 1596: 1593: 1591: 1587: 1581: 1578: 1575: 1573: 1569: 1566: 1565: 1560: 1555: 1553: 1548: 1546: 1541: 1540: 1537: 1531: 1528: 1525: 1522: 1518: 1515: 1514: 1510: 1502: 1498: 1493: 1488: 1483: 1478: 1474: 1470: 1466: 1462: 1458: 1451: 1449: 1445: 1440: 1436: 1431: 1426: 1422: 1418: 1415:(1–2): 3–15. 1414: 1410: 1406: 1399: 1396: 1391: 1387: 1382: 1377: 1372: 1367: 1364:(2): 109–17. 1363: 1359: 1355: 1348: 1345: 1340: 1336: 1331: 1326: 1321: 1316: 1312: 1308: 1305:(1): 358–63. 1304: 1300: 1293: 1286: 1283: 1278: 1274: 1270: 1266: 1262: 1258: 1255:(2): 119–32. 1254: 1250: 1243: 1241: 1239: 1237: 1233: 1228: 1224: 1219: 1214: 1210: 1206: 1202: 1195: 1192: 1187: 1183: 1179: 1175: 1171: 1167: 1164:(3): 269–75. 1163: 1159: 1152: 1149: 1144: 1140: 1136: 1132: 1128: 1124: 1120: 1116: 1109: 1106: 1101: 1099:9781444313307 1095: 1091: 1090: 1082: 1079: 1067: 1063: 1057: 1054: 1049: 1045: 1041: 1037: 1033: 1029: 1026:(2): 153–60. 1025: 1021: 1014: 1011: 1006: 1004:9781483217321 1000: 996: 995: 987: 984: 979: 975: 970: 965: 961: 957: 953: 949: 945: 938: 935: 930: 926: 921: 916: 912: 908: 904: 897: 894: 889: 887:9781119277781 883: 879: 872: 869: 857: 853: 847: 844: 839: 835: 830: 825: 821: 817: 814:(9): 3203–8. 813: 809: 805: 798: 795: 783: 779: 773: 771: 769: 765: 753: 752:www.ebi.ac.uk 749: 743: 740: 735: 729: 725: 720: 719: 710: 707: 701: 697: 694: 692: 689: 687: 684: 682: 679: 677: 674: 672: 669: 667: 664: 662: 659: 658: 654: 652: 650: 645: 641: 637: 632: 628: 619: 617: 615: 610: 602: 600: 597: 596:neuroblastoma 592: 584: 582: 567: 565: 558: 556: 549: 547: 545: 541: 537: 533: 532:gram negative 529: 528: 523: 519: 510: 508: 506: 502: 498: 490: 484: 480: 478: 474: 470: 466: 462: 458: 457: 453: 449: 444: 443: 438: 430: 428: 426: 422: 413: 408: 406: 403: 399: 395: 391: 387: 379: 378: 377: 371: 368: 365: 362: 359: 356: 355: 354: 347: 343: 341: 337: 333: 329: 324: 320: 316: 312: 308: 304: 296: 294: 292: 284: 282: 280: 276: 272: 268: 264: 260: 256: 252: 248: 247:triphosphates 244: 240: 236: 232: 228: 224: 220: 216: 212: 200: 197: 195: 191: 188: 185: 183: 179: 176: 173: 171: 167: 162: 158: 155: 152: 149: 146: 143: 139: 136: 133: 131: 127: 124: 121: 119: 115: 112: 109: 107: 103: 100: 99:NiceZyme view 97: 95: 91: 88: 85: 83: 79: 76: 73: 71: 67: 62: 59: 56: 54: 50: 47: 44: 42: 38: 33: 28: 21: 3210:Translocases 3207: 3194: 3181: 3168: 3155: 3145:Transferases 3142: 3129: 2986:Binding site 2888: 2866: 2841: 2462: 2427: 2288: 2185:Class I PI 3 2150:Pantothenate 2021:2.7.1-2.7.4: 2005:Transferases 1947: 1727: 1723:GMP synthase 1704: 1686: 1663: 1653:IMP synthase 1606: 1464: 1460: 1412: 1408: 1398: 1361: 1357: 1347: 1302: 1298: 1285: 1252: 1248: 1208: 1204: 1194: 1161: 1157: 1151: 1121:(1): 53–62. 1118: 1114: 1108: 1088: 1081: 1069:. Retrieved 1065: 1056: 1023: 1019: 1013: 997:. Elsevier. 993: 986: 954:(2): 381–9. 951: 947: 937: 913:(1): 48–55. 910: 906: 896: 877: 871: 859:. Retrieved 855: 846: 811: 807: 797: 785:. Retrieved 781: 755:. Retrieved 751: 742: 717: 709: 623: 606: 588: 571: 562: 553: 543: 539: 535: 525: 514: 494: 461:homotetramer 446: 440: 434: 417: 383: 375: 352: 300: 291:mitochondria 288: 230: 226: 222: 218: 214: 210: 209: 87:BRENDA entry 2981:Active site 2736:Transposase 2726:Recombinase 2371:-nucleoside 2197:Sphingosine 1071:17 November 861:17 November 644:proteolytic 473:prokaryotes 307:nucleotides 275:endocytosis 75:IntEnz view 35:Identifiers 3253:Categories 3184:Isomerases 3158:Hydrolases 3025:Regulation 2538:Telomerase 2381:Polymerase 2155:Mevalonate 2118:Riboflavin 2009:phosphorus 1896:Catabolism 1771:Catabolism 1577:nucleotide 1568:Metabolism 787:15 October 757:2 November 702:References 666:Nucleotide 661:Nucleoside 544:M. xanthus 540:M. xanthus 536:M. xanthus 522:homologues 518:metastasis 465:pyrimidine 437:tetrameric 409:Regulation 402:G proteins 388:, UTP for 338:(CTP) and 303:nucleoside 245:(NDP) and 219:NDP kinase 144:structures 111:KEGG entry 58:9026-51-1 3063:EC number 2730:Integrase 2654:3' to 5' 2299:Guanylate 2294:Uridylate 2284:Adenylate 2128:Thymidine 2123:Shikimate 1820:Anabolism 1598:Anabolism 1115:BioEssays 649:oncogenes 568:In plants 559:In humans 396:. During 323:histidine 285:Structure 64:Databases 3264:EC 2.7.4 3087:Kinetics 3011:Cofactor 2974:Activity 2664:RNase PH 2272:acceptor 2253:Creatine 2246:acceptor 2218:acceptor 2160:Pyruvate 2145:Glycerol 2106:Platelet 2081:Galacto- 2052:acceptor 1501:25700270 1461:PLOS ONE 1439:19415463 1390:25585611 1381:10153104 1339:12506203 1269:24964975 1227:17463326 1186:24708684 1178:11768310 1143:29304629 1048:18115068 1040:24961462 978:22114351 929:11121795 782:InterPro 655:See also 631:melanoma 614:caveolae 501:ribosome 477:bacteria 297:Function 239:catalyze 199:proteins 187:articles 175:articles 148:RCSB PDB 3259:Enzymes 3243:Biology 3197:Ligases 2967:Enzymes 2615:PrimPol 2600:Primase 2074:Hepatic 2069:Fructo- 1728:reverse 1687:reverse 1580:enzymes 1530:2.7.4.6 1492:4336288 1469:Bibcode 1430:2721137 1307:Bibcode 1277:1227825 1135:7702594 969:3258181 838:1324167 334:(GTP), 235:enzymes 233:s) are 217:, also 135:profile 118:MetaCyc 53:CAS no. 46:2.7.4.6 3229:Portal 3171:Lyases 2902:2.7.13 2880:2.7.12 2855:2.7.11 2830:2.7.10 2669:PNPase 2637:PNPase 2593:POLRMT 2588:ssRNAP 2101:Muscle 2064:Gluco- 2028:kinase 1523:(MeSH) 1499:  1489:  1437:  1427:  1388:  1378:  1337:  1330:140977 1327:  1275:  1267:  1225:  1184:  1176:  1141:  1133:  1096:  1046:  1038:  1001:  976:  966:  927:  884:  836:  829:556853 826:  730:  277:, and 182:PubMed 164:Search 154:PDBsum 94:ExPASy 82:BRENDA 70:IntEnz 41:EC no. 3123:Types 2750:2.7.8 2719:Other 2358:2.7.7 2318:2.7.6 2263:2.7.4 2240:2.7.3 2212:2.7.2 2096:Liver 2059:Hexo- 2046:2.7.1 1295:(PDF) 1273:S2CID 1182:S2CID 1139:S2CID 1044:S2CID 321:of a 237:that 215:NDPKs 130:PRIAM 3215:list 3208:EC7 3202:list 3195:EC6 3189:list 3182:EC5 3176:list 3169:EC4 3163:list 3156:EC3 3150:list 3143:EC2 3137:list 3130:EC1 2889:see 2867:see 2842:see 2216:COOH 2015:2.7) 1921:UPB1 1912:DPYS 1705:IMP→ 1664:IMP→ 1497:PMID 1435:PMID 1386:PMID 1335:PMID 1265:PMID 1223:PMID 1174:PMID 1131:PMID 1094:ISBN 1073:2015 1036:PMID 999:ISBN 974:PMID 925:PMID 882:ISBN 863:2015 834:PMID 789:2015 759:2015 728:ISBN 589:Ten 530:, a 497:tRNA 421:AMPK 398:cAMP 309:and 229:and 223:poly 194:NCBI 151:PDBe 106:KEGG 2632:PAP 2573:III 2507:/Y 2498:TDT 2479:/X 2471:III 2463:Pfu 2438:/B 2428:Taq 2403:/A 2170:PFP 2140:NAD 1831:CAD 1707:GMP 1666:AMP 1612:IMP 1608:R5P 1487:PMC 1477:doi 1425:PMC 1417:doi 1413:329 1376:PMC 1366:doi 1362:388 1325:PMC 1315:doi 1303:100 1257:doi 1253:388 1213:doi 1209:100 1166:doi 1123:doi 1028:doi 1024:388 964:PMC 956:doi 915:doi 824:PMC 816:doi 724:476 221:, ( 170:PMC 142:PDB 3255:: 2857:: 2832:: 2817:PO 2578:IV 2568:II 2477:IV 2473:/C 2436:II 2422:T7 2367:PO 2360:: 2320:: 2267:PO 2265:: 2242:: 2214:: 2050:OH 2048:: 2033:PO 2013:EC 2007:: 1570:: 1527:EC 1495:. 1485:. 1475:. 1465:10 1463:. 1459:. 1447:^ 1433:. 1423:. 1411:. 1407:. 1384:. 1374:. 1360:. 1356:. 1333:. 1323:. 1313:. 1301:. 1297:. 1271:. 1263:. 1251:. 1235:^ 1221:. 1207:. 1203:. 1180:. 1172:. 1162:32 1160:. 1137:. 1129:. 1119:17 1117:. 1064:. 1042:. 1034:. 1022:. 972:. 962:. 952:23 950:. 946:. 923:. 911:49 909:. 905:. 854:. 832:. 822:. 812:11 810:. 806:. 780:. 767:^ 750:. 726:. 479:. 450:, 445:, 281:. 273:, 269:, 3231:: 3217:) 3213:( 3204:) 3200:( 3191:) 3187:( 3178:) 3174:( 3165:) 3161:( 3152:) 3148:( 3139:) 3135:( 2959:e 2952:t 2945:v 2819:4 2815:( 2732:) 2728:( 2610:2 2605:1 2583:V 2521:Îș 2516:Îč 2511:η 2505:V 2493:ÎŒ 2488:λ 2483:ÎČ 2457:ζ 2452:Δ 2447:ÎŽ 2442:α 2417:Îœ 2412:Ξ 2407:Îł 2401:I 2373:) 2369:4 2365:( 2336:) 2333:7 2331:O 2329:2 2327:P 2325:( 2269:4 2244:N 2111:2 2091:1 2038:) 2035:4 2031:( 2026:/ 1997:e 1990:t 1983:v 1919:/ 1910:/ 1868:/ 1709:: 1668:: 1614:: 1610:→ 1558:e 1551:t 1544:v 1503:. 1479:: 1471:: 1441:. 1419:: 1392:. 1368:: 1341:. 1317:: 1309:: 1279:. 1259:: 1229:. 1215:: 1188:. 1168:: 1145:. 1125:: 1102:. 1075:. 1050:. 1030:: 1007:. 980:. 958:: 931:. 917:: 890:. 865:. 840:. 818:: 791:. 761:. 736:. 579:2 577:O 575:2 419:( 225:) 213:(

Index


EC no.
2.7.4.6
CAS no.
9026-51-1
IntEnz
IntEnz view
BRENDA
BRENDA entry
ExPASy
NiceZyme view
KEGG
KEGG entry
MetaCyc
metabolic pathway
PRIAM
profile
PDB
RCSB PDB
PDBe
PDBsum
PMC
articles
PubMed
articles
NCBI
proteins
enzymes
catalyze
nucleoside diphosphates

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