Knowledge (XXG)

Amidase

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Valiña AL, Mazumder-Shivakumar D, Bruice TC (December 2004). "Probing the Ser-Ser-Lys catalytic triad mechanism of peptide amidase: computational studies of the ground state, transition state, and intermediate".
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Kwak JH, Shin K, Woo JS, Kim MK, Kim SI, Eom SH, Hong KW (December 2002). "Expression, purification, and crystallization of glutamyl-tRNA(Gln) specific amidotransferase from Bacillus stearothermophilus".
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specificity and function. Nonetheless, these enzymes maintain a core alpha/beta/alpha structure, where the topologies of the N- and C-terminal halves are similar. AS enzymes characteristically have a
1075: 381: 179: 1068: 325: 313: 198: 1745: 542: 1311: 293: 1774: 896:"Structure of malonamidase E2 reveals a novelSer-cisSer-Lys catalytic triad in a new serine hydrolase fold that is prevalent in nature" 1393: 1020:"The fate of certain organic acids and amides in the rabbit. 11 Further observations on the hydrolysis of amides by tissue extracts" 191: 790: 1286: 118: 1549: 401: 142: 558: 1738: 733:
enzyme that catalyses the formation of Gln-tRNA(Gln) by the transamidation of misacylated Glu-tRNA(Gln) via amidolysis of
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Please help update this article to reflect recent events or newly available information.
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the hydrolysis of malonamate into malonate and ammonia, and which is involved in the
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and sleep-inducing oleamide), thereby controlling the level and duration of
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Shin S, Lee TH, Ha NC, Koo HM, Kim SY, Lee HS, Kim YS, Oh BH (June 2002).
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Wei BQ, Mikkelsen TS, McKinney MK, Lander ES, Cravatt BF (December 2006).
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have been solved for this family, which can be accessed at the
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Bray HG, James SP, Raffan IM, Ryman BE, Thorpe WV (1949).
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This article incorporates text from the public domain
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residues, therefore they differ from classical serine
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Examples of AS signature-containing enzymes include:
1558: 1522: 1491: 1460: 1409: 1345: 1322: 1257: 1224: 1191: 1103: 395: 375: 357: 352: 336: 324: 312: 292: 280: 268: 256: 248: 243: 217: 197: 185: 173: 168: 148: 129: 117: 105: 93: 81: 69: 57: 52: 40: 28: 23: 18: 1018:Bray HG, James SP, Thorpe WV, Wasdell MR (1950). 729:Subunit A of Glu-tRNA(Gln) amidotransferase, a 660:the hydrolysis of the C-terminal amide bond of 229:X-ray structure of native peptide amidase from 812: 810: 1739: 1387: 1076: 8: 580:. They are widespread, being found in both 1746: 1732: 1394: 1380: 1372: 1083: 1069: 1061: 349: 223: 165: 1043: 1008: 919: 870: 630:. These enzymes possess a unique, highly 543:urea cycle and metabolism of amino groups 638:used for amide hydrolysis, although the 1669: 806: 646:formation can differ between enzymes. 214: 15: 1312:Activation-induced cytidine deaminase 559:benzoate degradation via coa ligation 501:This enzyme belongs to the family of 7: 1704: 1702: 618:and glycine residues, but devoid of 513:. Other names in common use include 464:of an amide. In this way, the two 1718:. You can help Knowledge (XXG) by 450:N-acetylaminohydrolase (ambiguous) 14: 537:. This enzyme participates in 6 1672: 750: 494: 1094:: carbon-nitrogen non-peptide ( 1287:Inosine monophosphate synthase 1: 958:10.1016/S1016-8478(23)15118-1 572:stretch of approximately 130 353:Available protein structures: 232:Stenotrophomonas maltophilia 1796: 1775:Enzymes of known structure 1701: 1684: 1249:Protein-arginine deiminase 1171:Fatty acid amide hydrolase 614:C-terminal region rich in 555:cyanoamino acid metabolism 438:amidohydrolase (ambiguous) 1550:Michaelis–Menten kinetics 759:This section needs to be 348: 222: 164: 1442:Diffusion-limited enzyme 912:10.1093/emboj/21.11.2509 670:amide hydrolases, which 547:phenylalanine metabolism 511:acylamide amidohydrolase 509:of this enzyme class is 484:are monocarboxylate and 1166:Aspartylglucosaminidase 700:Malonamidase E2, which 1714:-related article is a 872:10.1074/jbc.M606646200 535:N-acetylaminohydrolase 468:of this enzyme are an 1535:Eadie–Hofstee diagram 1468:Allosteric regulation 782:As of late 2018, 162 656:amidase (Pam), which 551:tryptophan metabolism 442:deaminase (ambiguous) 1545:Lineweaver–Burk plot 1297:GTP cyclohydrolase I 434:acylase (misleading) 1277:Adenosine deaminase 1176:Histone deacetylase 724:nitrogen metabolism 712:from bacteroids to 640:catalytic mechanism 568:Amidases contain a 563:styrene degradation 1504:Enzyme superfamily 1437:Enzyme promiscuity 1302:Cytidine deaminase 1261:: Cyclic amidines/ 1228:: Linear amidines/ 793:2021-09-18 at the 742:Structural studies 678:(e.g. cannabinoid 539:metabolic pathways 480:, whereas its two 1727: 1726: 1660: 1659: 1369: 1368: 1272:Guanine deaminase 1107:: Linear amides / 1036:10.1042/bj0470294 1001:10.1042/bj0440618 832:10.1021/bi049025r 780: 779: 531:fatty acylamidase 446:fatty acylamidase 411: 410: 407: 406: 402:structure summary 213: 212: 209: 208: 112:metabolic pathway 1787: 1765:Protein families 1748: 1741: 1734: 1703: 1677: 1676: 1668: 1540:Hanes–Woolf plot 1483:Enzyme activator 1478:Enzyme inhibitor 1452:Enzyme catalysis 1396: 1389: 1382: 1373: 1195:: Cyclic amides/ 1085: 1078: 1071: 1062: 1057: 1047: 1014: 1012: 970: 969: 940: 934: 933: 923: 891: 885: 884: 874: 865:(48): 36569–78. 850: 844: 843: 826:(50): 15657–72. 814: 775: 772: 766: 754: 753: 746: 689:by this diverse 674:fatty acid amid 642:for acyl-enzyme 612:highly conserved 576:known as the AS 498: 350: 227: 215: 166: 16: 1795: 1794: 1790: 1789: 1788: 1786: 1785: 1784: 1755: 1754: 1753: 1752: 1699: 1697: 1683: 1671: 1663: 1661: 1656: 1568:Oxidoreductases 1554: 1530:Enzyme kinetics 1518: 1514:List of enzymes 1487: 1456: 1427:Catalytic triad 1405: 1400: 1370: 1365: 1341: 1329:Aminohydrolases 1327: 1318: 1264:Aminohydrolases 1262: 1253: 1229: 1220: 1198:Amidohydrolases 1196: 1187: 1110:Amidohydrolases 1108: 1099: 1089: 1017: 982: 979: 977:Further reading 974: 973: 942: 941: 937: 906:(11): 2509–16. 893: 892: 888: 852: 851: 847: 816: 815: 808: 803: 795:Wayback Machine 776: 770: 767: 764: 755: 751: 744: 636:catalytic triad 507:systematic name 489: 477: 314:OPM superfamily 239: 12: 11: 5: 1793: 1791: 1783: 1782: 1777: 1772: 1767: 1757: 1756: 1751: 1750: 1743: 1736: 1728: 1725: 1724: 1682: 1681: 1658: 1657: 1655: 1654: 1641: 1628: 1615: 1602: 1589: 1576: 1562: 1560: 1556: 1555: 1553: 1552: 1547: 1542: 1537: 1532: 1526: 1524: 1520: 1519: 1517: 1516: 1511: 1506: 1501: 1495: 1493: 1492:Classification 1489: 1488: 1486: 1485: 1480: 1475: 1470: 1464: 1462: 1458: 1457: 1455: 1454: 1449: 1444: 1439: 1434: 1429: 1424: 1419: 1413: 1411: 1407: 1406: 1401: 1399: 1398: 1391: 1384: 1376: 1367: 1366: 1364: 1363: 1358: 1352: 1350: 1343: 1342: 1340: 1339: 1333: 1331: 1320: 1319: 1317: 1316: 1315: 1314: 1309: 1299: 1294: 1292:DCMP deaminase 1289: 1284: 1279: 1274: 1268: 1266: 1255: 1254: 1252: 1251: 1246: 1241: 1235: 1233: 1231:Ureohydrolases 1222: 1221: 1219: 1218: 1216:Dihydroorotase 1213: 1211:Beta-lactamase 1208: 1202: 1200: 1189: 1188: 1186: 1185: 1184: 1183: 1173: 1168: 1163: 1158: 1157: 1156: 1151: 1148:Aspartoacylase 1145: 1135: 1130: 1125: 1120: 1114: 1112: 1101: 1100: 1090: 1088: 1087: 1080: 1073: 1065: 1059: 1058: 1030:(3): 294–299. 1015: 995:(5): 618–625. 978: 975: 972: 971: 935: 886: 845: 805: 804: 802: 799: 778: 777: 758: 756: 749: 743: 740: 739: 738: 731:heterotrimeric 727: 698: 665: 523:amidohydrolase 487: 475: 409: 408: 405: 404: 399: 393: 392: 379: 373: 372: 362: 355: 354: 346: 345: 340: 334: 333: 328: 322: 321: 316: 310: 309: 296: 290: 289: 284: 278: 277: 272: 266: 265: 260: 254: 253: 250: 246: 245: 241: 240: 228: 220: 219: 211: 210: 207: 206: 201: 195: 194: 189: 183: 182: 177: 171: 170: 162: 161: 152: 146: 145: 134: 127: 126: 121: 115: 114: 109: 103: 102: 97: 91: 90: 85: 79: 78: 73: 67: 66: 61: 55: 54: 50: 49: 44: 38: 37: 32: 26: 25: 21: 20: 13: 10: 9: 6: 4: 3: 2: 1792: 1781: 1778: 1776: 1773: 1771: 1768: 1766: 1763: 1762: 1760: 1749: 1744: 1742: 1737: 1735: 1730: 1729: 1723: 1721: 1717: 1713: 1710: 1705: 1700: 1696: 1692: 1688: 1680: 1675: 1670: 1666: 1652: 1648: 1647: 1642: 1639: 1635: 1634: 1629: 1626: 1622: 1621: 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Biol. Chem 856: 849: 846: 841: 837: 833: 829: 825: 821: 813: 811: 807: 800: 798: 796: 792: 789: 785: 774: 762: 757: 748: 747: 741: 736: 732: 728: 725: 722: 718: 715: 711: 707: 703: 699: 697:transmitters. 696: 692: 688: 685: 681: 677: 673: 669: 666: 663: 659: 655: 652: 651: 650: 647: 645: 641: 637: 633: 629: 625: 621: 620:aspartic acid 617: 613: 609: 605: 602: 598: 594: 591: 587: 583: 579: 575: 571: 566: 564: 560: 556: 552: 548: 544: 540: 536: 532: 528: 524: 520: 516: 512: 508: 504: 499: 497: 492: 490: 483: 479: 471: 467: 463: 459: 455: 451: 447: 443: 439: 435: 431: 427: 424: 420: 416: 403: 400: 398: 394: 391: 387: 383: 380: 378: 374: 370: 366: 363: 360: 356: 351: 347: 344: 341: 339: 335: 332: 329: 327: 323: 320: 317: 315: 311: 308: 304: 300: 297: 295: 291: 288: 285: 283: 279: 276: 273: 271: 267: 264: 261: 259: 255: 251: 247: 242: 238: 234: 233: 226: 221: 216: 205: 202: 200: 196: 193: 190: 188: 184: 181: 178: 176: 172: 167: 163: 160: 156: 153: 151: 150:Gene Ontology 147: 144: 141: 138: 135: 132: 128: 125: 122: 120: 116: 113: 110: 108: 104: 101: 98: 96: 92: 89: 88:NiceZyme view 86: 84: 80: 77: 74: 72: 68: 65: 62: 60: 56: 51: 48: 45: 43: 39: 36: 33: 31: 27: 22: 17: 1780:EC 3.5 stubs 1720:expanding it 1706: 1698: 1646:Translocases 1643: 1630: 1617: 1604: 1591: 1581:Transferases 1578: 1565: 1422:Binding site 1138:Aminoacylase 1118:Asparaginase 1027: 1023: 992: 988: 949: 945: 938: 903: 899: 889: 862: 858: 848: 823: 820:Biochemistry 819: 781: 768: 760: 648: 644:intermediate 634:Ser-Ser-Lys 567: 534: 530: 526: 522: 518: 514: 510: 500: 493: 449: 445: 441: 437: 433: 429: 418: 412: 230: 76:BRENDA entry 1417:Active site 1326:: Nitriles/ 1206:Barbiturase 1133:Biotinidase 1123:Glutaminase 582:prokaryotes 574:amino acids 515:acylamidase 430:acylamidase 326:OPM protein 244:Identifiers 64:IntEnz view 24:Identifiers 1759:Categories 1620:Isomerases 1594:Hydrolases 1461:Regulation 1244:Agmatinase 1161:Ceramidase 1092:Hydrolases 1024:Biochem. J 989:Biochem. J 946:Mol. Cells 801:References 784:structures 684:signalling 680:anandamide 676:substrates 668:Fatty acid 628:hydrolases 597:hydrolysis 586:eukaryotes 503:hydrolases 466:substrates 462:hydrolysis 415:enzymology 365:structures 338:Membranome 133:structures 100:KEGG entry 47:9012-56-0 1695:IPR000120 1499:EC number 1337:Nitrilase 735:glutamine 721:symbiotic 708:of fixed 706:transport 702:catalyses 672:hydrolyse 658:catalyses 632:conserved 624:histidine 608:substrate 570:conserved 527:deaminase 458:catalyzes 287:PDOC00494 275:IPR000120 53:Databases 1770:EC 3.5.1 1691:InterPro 1523:Kinetics 1447:Cofactor 1410:Activity 1239:Arginase 1054:14800883 966:12521300 930:12032064 881:17015445 840:15595822 791:Archived 771:May 2017 710:nitrogen 662:peptides 593:catalyse 578:sequence 482:products 452:) is an 382:RCSB PDB 270:InterPro 204:proteins 192:articles 180:articles 137:RCSB PDB 1679:Biology 1633:Ligases 1403:Enzymes 1349:: Other 1181:Sirtuin 1045:1275209 1010:1274617 761:updated 687:induced 654:Peptide 590:enzymes 519:acylase 426:3.5.1.4 419:amidase 282:PROSITE 263:PF01425 252:Amidase 235:at 1.4 218:Amidase 159:QuickGO 124:profile 107:MetaCyc 42:CAS no. 35:3.5.1.4 19:amidase 1712:enzyme 1709:EC 3.5 1665:Portal 1607:Lyases 1347:3.5.99 1150:(ACY2) 1128:Urease 1052:  1042:  1007:  964:  928:  921:126024 918:  900:EMBO J 879:  838:  616:serine 561:, and 533:, and 454:enzyme 397:PDBsum 371:  361:  307:SUPFAM 249:Symbol 187:PubMed 169:Search 155:AmiGO 143:PDBsum 83:ExPASy 71:BRENDA 59:IntEnz 30:EC no. 1707:This 1559:Types 1324:3.5.5 1307:AICDA 1259:3.5.4 1226:3.5.3 1193:3.5.2 1105:3.5.1 717:cells 714:plant 695:lipid 691:class 604:bonds 601:amide 588:. AS 470:amide 456:that 417:, an 303:SCOPe 294:SCOP2 119:PRIAM 1716:stub 1689:and 1687:Pfam 1651:list 1644:EC7 1638:list 1631:EC6 1625:list 1618:EC5 1612:list 1605:EC4 1599:list 1592:EC3 1586:list 1579:EC2 1573:list 1566:EC1 1154:ACY3 1143:ACY1 1098:3.5) 1050:PMID 962:PMID 926:PMID 877:PMID 836:PMID 788:Pfam 622:and 595:the 584:and 472:and 460:the 390:PDBj 386:PDBe 369:ECOD 359:Pfam 331:1mt5 299:1ocm 258:Pfam 199:NCBI 140:PDBe 95:KEGG 1040:PMC 1032:doi 1005:PMC 997:doi 954:doi 916:PMC 908:doi 867:doi 863:281 828:doi 719:in 693:of 599:of 413:In 377:PDB 343:325 175:PMC 131:PDB 1761:: 1693:: 1096:EC 1048:. 1038:. 1028:47 1026:. 1022:. 1003:. 993:44 991:. 987:. 960:. 950:14 948:. 924:. 914:. 904:21 902:. 898:. 875:. 861:. 857:. 834:. 824:43 822:. 809:^ 797:. 565:. 557:, 553:, 549:, 545:, 541:: 529:, 525:, 521:, 517:, 491:. 486:NH 448:, 444:, 440:, 436:, 432:, 428:, 423:EC 388:; 384:; 367:/ 319:55 305:/ 301:/ 157:/ 1747:e 1740:t 1733:v 1722:. 1667:: 1653:) 1649:( 1640:) 1636:( 1627:) 1623:( 1614:) 1610:( 1601:) 1597:( 1588:) 1584:( 1575:) 1571:( 1395:e 1388:t 1381:v 1084:e 1077:t 1070:v 1056:. 1034:: 1013:. 999:: 968:. 956:: 932:. 910:: 883:. 869:: 842:. 830:: 773:) 769:( 763:. 737:. 726:. 664:. 488:3 478:O 476:2 474:H 421:( 237:Ă…

Index

EC no.
3.5.1.4
CAS no.
9012-56-0
IntEnz
IntEnz view
BRENDA
BRENDA entry
ExPASy
NiceZyme view
KEGG
KEGG entry
MetaCyc
metabolic pathway
PRIAM
profile
PDB
RCSB PDB
PDBe
PDBsum
Gene Ontology
AmiGO
QuickGO
PMC
articles
PubMed
articles
NCBI
proteins

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