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Benedikt Kessler

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Turnbull, Andrew P.; Ioannidis, Stephanos; Krajewski, Wojciech W.; Pinto-Fernandez, Adan; Heride, Claire; Martin, Agnes C. L.; Tonkin, Louise M.; Townsend, Elizabeth C.; Buker, Shane M.; Lancia, David R.; Caravella, Justin A.; Toms, Angela V.; Charlton, Thomas M.; Lahdenranta, Johanna; Wilker, Erik;
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Altun, Mikael; Kramer, Holger B.; Willems, Lianne I.; McDermott, Jeffrey L.; Leach, Craig A.; Goldenberg, Seth J.; Kumar, K.G. Suresh; Konietzny, Rebecca; Fischer, Roman; Kogan, Edward; MacKeen, Mukram M.; McGouran, Joanna; Khoronenkova, Svetlana V.; Parsons, Jason L.; Dianov, Grigory L.; Nicholson,
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Chauhan, Dharminder; Tian, Ze; Nicholson, Benjamin; Kumar, K.G. Suresh; Zhou, Bin; Carrasco, Ruben; McDermott, Jeffrey L.; Leach, Craig A.; Fulcinniti, Mariaterresa; Kodrasov, Matthew P.; Weinstock, Joseph; Kingsbury, William D.; Hideshima, Teru; Shah, Parantu K.; Minvielle, Stephane; Altun, Mikael;
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methods to profile active ubiquitin processing enzymes, in particular deubiquitylating enzymes (DUBs) and the dynamic ubiquitome. Ubiquitin-based active site directed probes were developed that allowed the profiling of the active cellular content of the DUB enzyme family. This approach was also used
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analysis since 1993 and mass spectrometry-based approaches to study the ubiquitin-proteasome pathway since 2000. In 2005, he established his own group at the University of Oxford, Nuffield Department of Medicine (NDM), with a focus on ubiquitin and protease biology, biological mass spectrometry and
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patients, and to the discovery of potentially clinically exploitable cancer targets within the ubiquitin system, in particular deubiquitylating enzymes (DUBs). The Kessler group also helped to uncover molecular signatures associated with a panel of human diseases via clinical proteomics studies.
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Huang, Honglei; Van Dullemen, Leon F. A.; Akhtar, Mohammed Z.; Faro, Maria-Letizia Lo; Yu, Zhanru; Valli, Alessandro; Dona, Anthony; Thézénas, Marie-Laëtitia; Charles, Philip D.; Fischer, Roman; Kaisar, Maria; Leuvenink, Henri G. D.; Ploeg, Rutger J.; Kessler, Benedikt M. (2018).
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Follows, Bruce C.; Evans, Nicola J.; Stead, Lucy; Alli, Cristina; Zarayskiy, Vladislav V.; Talbot, Adam C.; Buckmelter, Alexandre J.; Wang, Minghua; McKinnon, Crystal L.; Saab, Fabienne; McGouran, Joanna F.; Century, Hannah; Gersch, Malte; Pittman, Marc S.; et al. (2017).
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Chauhan, D., Tian, Z., Nicholson, B., Kumar, K. G. S., Zhou, B., Carrasco, R., . . . Kodrasov, M. P. (2012). A small molecule inhibitor of ubiquitin-specific protease-7 induces apoptosis in multiple myeloma cells and overcomes bortezomib resistance.. Cancer cell, 22(3),
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Hemelaar, J., Galardy, P. J., Borodovsky, A., Kessler, B. M., Ploegh, H. L., & Ovaa, H. (2004). Chemistry-based functional proteomics: mechanism-based activity-profiling tools for ubiquitin and ubiquitin-like specific proteases.. Journal of proteome research, 3(2),
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Kramer, H. B., Simmons, A., Gasper-Smith, N., Borrow, P., Lavender, K. J., Qin, L., . . . Haynes, B. F. (2010). Elevation of intact and proteolytic fragments of acute phase proteins constitutes the earliest systemic antiviral response in HIV-1 infection.. PLoS Pathog,
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Parsons, J. L., Dianova, I. I., Khoronenkova, S. V., Edelmann, M. J., Kessler, B. M., & Dianov, G. L. (2011). USP47 is a deubiquitylating enzyme that regulates base excision repair by controlling steady-state levels of DNA polymerase β.. Molecular cell, 41(5),
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Iglesias-Gato, D., Chuan, Y. -C., Jiang, N., Svensson, C., Bao, J., Shang, Z., . . . Flores-Morales, A. (2015). Erratum: OTUB1 de-ubiquitinating enzyme promotes prostate cancer cell invasion in vitro and tumorigenesis in vivo.. Molecular cancer, 14,
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Altun, M., Kramer, H. B., Willems, L. I., McDermott, J. L., Leach, C. A., Goldenberg, S. J., . . . Kogan, E. (2011). Activity-based chemical proteomics accelerates inhibitor development for deubiquitylating enzymes.. Chemistry & biology, 18(11),
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Edelmann, M. J., Kramer, H. B., Altun, M., & Kessler, B. M. (2010). Post-translational modification of the deubiquitinating enzyme otubain 1 modulates active RhoA levels and susceptibility to Yersinia invasion.. The FEBS journal, 277(11),
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Huang, H., van Dullemen, L., Akhtar, M., Lo Faro, M. L., Yu, Z., Valli, A., . . . Kessler, B. (2018). Proteo-metabolomics reveals compensation between ischemic and non-injured contralateral kidneys after reperfusion. Scientific Reports,
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Altun, M., Galardy, P. J., Shringarpure, R., Hideshima, T., LeBlanc, R., Anderson, K. C., . . . Kessler, B. M. (2005). Effects of PS-341 on the activity and composition of proteasomes in multiple myeloma cells.. Cancer research, 65(17),
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Kramer, Holger B.; Lavender, Kerry J.; Qin, Li; Stacey, Andrea R.; Liu, Michael K. P.; Di Gleria, Katalin; Simmons, Alison; Gasper-Smith, Nancy; Haynes, Barton F.; McMichael, Andrew J.; Borrow, Persephone; Kessler, Benedikt M. (2010).
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in immuno-oncology. In particular, Kessler's work contributed to the characterisation of small molecule DUB inhibitors as novel potential therapeutic agents against USP30 in Parkinson's disease, USP28 in squamous lung carcinoma and
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Pinto-Fernández, Adán; Davis, Simon; Schofield, Abigail B.; Scott, Hannah C.; Zhang, Ping; Salah, Eidarus; Mathea, Sebastian; Charles, Philip D.; Damianou, Andreas; Bond, Gareth; Fischer, Roman; Kessler, Benedikt M. (2019).
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Salah, E., Zhang, P., Charles, P., Mathea, S., Damianou, A., Fischer, R., . . . Scott, H. (2019). Comprehensive Landscape of Active Deubiquitinating Enzymes Profiled by Advanced Chemoproteomics. Frontiers in Chemistry,
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Konietnzy, R., Wijnhoven, P., Blackford, A. N., Kessler, B., Travers, J., Nishi, R., & Jackson, S. P. (2015). USP4 auto-deubiquitylation promotes homologous recombination. Molecular Cell, 60(3), 362-373.
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Iglesias-Gato, Diego; Chuan, Yin-Choy; Jiang, Ning; Svensson, Charlotte; Bao, Jing; Paul, Indranil; Egevad, Lars; Kessler, Benedikt M.; Wikström, Pernilla; Niu, Yuanjie; Flores-Morales, Amilcar (2015).
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Altun, M.; Walter, T. S.; Kramer, H. B.; Herr, P.; Iphöfer, A.; Boström, J.; David, Y.; Komsany, A.; Ternette, N.; Navon, A.; Stuart, D. I.; Ren, J.; Kessler, B. M. (2015).
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Kessler, Benedikt M.; Glas, Rickard; Ploegh, Hidde L. (2002). "MHC class I antigen processing regulated by cytosolic proteolysis—short cuts that alter peptide generation".
523: 177:(DUBs). He is currently a member of the Innovative Technology Enabling Network (ITEN), a scientific consortium that explores DUBs as cancer targets coordinated by 1517: 537:
Altun, Mikael; Galardy, Paul J.; Shringarpure, Reshma; Hideshima, Teru; Leblanc, Richard; Anderson, Kenneth C.; Ploegh, Hidde L.; Kessler, Benedikt M. (2005).
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Wijnhoven, Paul; Konietzny, Rebecca; Blackford, Andrew N.; Travers, Jonathan; Kessler, Benedikt M.; Nishi, Ryotaro; Jackson, Stephen P. (2015).
905:"Post-translational modification of the deubiquitinating enzyme otubain 1 modulates active RhoA levels and susceptibility to Yersinia invasion" 862:
Borodovsky, Anna; Ovaa, Huib; Kolli, Nagamalleswari; Gan-Erdene, Tudeviin; Wilkinson, Keith D.; Ploegh, Hidde L.; Kessler, Benedikt M. (2002).
693:"Elevation of Intact and Proteolytic Fragments of Acute Phase Proteins Constitutes the Earliest Systemic Antiviral Response in HIV-1 Infection" 190: 643:"A Small Molecule Inhibitor of Ubiquitin-Specific Protease-7 Induces Apoptosis in Multiple Myeloma Cells and Overcomes Bortezomib Resistance" 509: 115:
biology. Some of his work has dealt with defining the molecular signatures in human disease processes and accelerating target discovery in
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Parsons, Jason L.; Dianova, Irina I.; Khoronenkova, Svetlana V.; Edelmann, Mariola J.; Kessler, Benedikt M.; Dianov, Grigory L. (2011).
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In 2001, Kessler joined the Harvard Medical School as an Instructor in Pathology. He left Harvard in 2004 and moved to the
1333:"USP28 deletion and small-molecule inhibition destabilizes c-MYC and elicits regression of squamous cell lung carcinoma" 443: 1522: 1507: 745:"Proteo-metabolomics reveals compensation between ischemic and non-injured contralateral kidneys after reperfusion" 580:"The Human Otubain2-Ubiquitin Structure Provides Insights into the Cleavage Specificity of Poly-Ubiquitin-Linkages" 1512: 342: 174: 1426: 1502: 947:"OTUB1 de-ubiquitinating enzyme promotes prostate cancer cell invasion in vitro and tumorigenesis in vivo" 147: 143: 116: 66: 370:
Wang, E. W.; Kessler, B. M.; Borodovsky, A.; Cravatt, B. F.; Bogyo, M.; Ploegh, H. L.; Glas, R. (2000).
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Kessler, Benedikt M.; Orlowski, Robert; Richardson, Paul; Munshi, Nikhil; Anderson, Kenneth C. (2012).
1441: 1284:"Structural Premise of Selective Deubiquitinase USP30 Inhibition by Small-Molecule Benzosulfonamides" 816: 756: 591: 383: 101: 81: 1385:"Activity-Based Chemical Proteomics Accelerates Inhibitor Development for Deubiquitylating Enzymes" 1283: 864:"Chemistry-Based Functional Proteomics Reveals Novel Members of the Deubiquitinating Enzyme Family" 1137:"Deletion of the deISGylating enzyme USP18 enhances tumour cell antigenicity and radiosensitivity" 356: 805:"Comprehensive Landscape of Active Deubiquitinating Enzymes Profiled by Advanced Chemoproteomics" 1235:"USP30 sets a trigger threshold for PINK1-PARKIN amplification of mitochondrial ubiquitylation" 1234: 1467: 1406: 1364: 1313: 1264: 1215: 1166: 1117: 1068: 1027: 978: 926: 885: 844: 784: 724: 672: 619: 560: 488: 411: 194:
proteomics. Kessler relocated his laboratory to the Target Discovery Institute (TDI) in 2013.
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Kessler was part of the DUB Alliance, a group that is working to develop novel drugs against
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Kessler has been studying major histocompatibility complex (MHC) class I antigens using
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Member of the British Society of Mass Spectrometry and British Society of Cell Biology
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where he received his Ph.D. in Immunology. He completed his post-doctoral training at
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Recipient of a Multiple Myeloma Research Foundation (MMRF) Senior Research Award
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Proceedings of the National Academy of Sciences of the United States of America
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NIH study section member in 2003 and 2004: Bio-warfare and infectious diseases
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Kessler has made contributions to explain the action of novel clinical drugs (
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Cesar Roux Research Award of the Faculty of Medicine, Lausanne University
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is a Swiss researcher and academic. He is Professor of Biochemistry and
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Edelmann, M. J.; Kramer, H. B.; Altun, M.; Kessler, B. M. (2010).
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Human Frontier Science Program Organization long-term fellowship
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Member of the American Association for Cancer Research (AACR)
1487: 77: 72: 56: 46: 41: 21: 254:Roche Research Foundation post-doctoral fellowship 222:) in infection and prostate cancer, the role of 126:, the British Society of Cell Biology and the 218:to demonstrate the involvement of otubain 1 ( 138:Kessler received a B.A. in Biochemistry from 8: 1135:Pinto-Fernandez, Adan (20 November 2020). 29: 18: 1461: 1400: 1358: 1348: 1307: 1258: 1209: 1160: 1111: 1062: 1021: 972: 962: 920: 879: 838: 828: 778: 768: 718: 708: 666: 613: 603: 554: 405: 395: 213:The Kessler Lab is currently developing 158:in antigen processing and presentation. 128:American Association for Cancer Research 1383:Benjamin; Kessler, Benedikt M. (2011). 331: 107:Kessler's research has been focused on 1233:Rusilowicz-Jones, Emma (7 July 2020). 635: 633: 1518:Academics of the University of Oxford 504: 502: 337: 335: 140:Swiss Federal Institute of Technology 63:Swiss Federal Institute of Technology 7: 272:MRC New Investigator Award 2006-2009 144:Ludwig Institute for Cancer Research 67:Ludwig Institute for Cancer Research 357:"Benedikt Kessler - Google Scholar" 100:at the Target Discovery Institute, 14: 1282:O'Brien, Darragh (28 June 2023). 205:, Kyprolis) for the treatment of 124:British Mass Spectrometry Society 1184:JovĂ©, Veronica (27 March 2024). 922:10.1111/j.1742-4658.2010.07665.x 1331:Ruiz, Josue (12 October 2021). 1402:10.1016/j.chembiol.2011.08.018 1: 881:10.1016/S1074-5521(02)00248-X 556:10.1158/0008-5472.CAN-05-0506 485:10.1016/S0161-5890(02)00100-1 269:Wellcome Trust VIP Award 2005 230:in DNA repair mechanisms and 154:where he studied the role of 16:Swiss researcher and academic 1086:Olie, Cyriel (31 May 2023). 1064:10.1016/j.molcel.2011.02.016 1014:10.1016/j.molcel.2015.09.019 710:10.1371/journal.ppat.1000893 605:10.1371/journal.pone.0115344 510:"Professor Benedikt Kessler" 1300:10.1016/j.mcpro.2023.100609 122:Kessler is a member of the 1539: 1488:Target Discovery Institute 1202:10.1016/j.isci.2024.109593 1153:10.1038/s41416-020-01167-y 1104:10.1038/s41419-023-05725-z 770:10.1038/s41598-018-26804-8 1141:British Journal of Cancer 964:10.1186/s12943-014-0280-2 659:10.1016/j.ccr.2012.08.007 87: 37: 28: 1092:Cell Death & Disease 830:10.3389/fchem.2019.00592 175:deubiquitylating enzymes 142:in 1992. He then joined 119:. He holds two patents. 1389:Chemistry & Biology 868:Chemistry & Biology 1251:10.26508/lsa.202000768 809:Frontiers in Chemistry 397:10.1073/pnas.180328897 148:Harvard Medical School 117:translational research 277:Selected publications 239:in multiple myeloma. 150:in the laboratory of 473:Molecular Immunology 458:"Benedikt M Kessler" 444:"Active Site Probes" 102:University of Oxford 82:University of Oxford 1454:10.1038/nature24451 1446:2017Natur.550..481T 1350:10.7554/eLife.71596 1288:Mol Cell Proteomics 821:2019FrCh....7..592P 761:2018NatSR...8.8539H 596:2015PLoSO..1015344A 388:2000PNAS...97.9990W 42:Academic background 749:Scientific Reports 343:"Benedikt Kessler" 50:B.A., Biochemistry 1523:Swiss biochemists 1508:ETH Zurich alumni 1440:(7677): 481–486. 1395:(11): 1401–1412. 1245:(8): e202000768. 1239:Life Sci Alliance 874:(10): 1149–1159. 549:(17): 7896–7901. 382:(18): 9990–9995. 243:Awards and honors 185:Research and work 98:Mass Spectrometry 91: 90: 52:Ph.D., Immunology 1530: 1476: 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work 71: 68: 64: 61: 59: 55: 49: 45: 40: 36: 32: 27: 20: 1437: 1433: 1419: 1392: 1388: 1377: 1340: 1336: 1326: 1291: 1287: 1277: 1242: 1238: 1228: 1193: 1189: 1179: 1144: 1140: 1130: 1095: 1091: 1081: 1054: 1050: 1040: 1005: 1001: 991: 954: 950: 939: 912: 908: 898: 871: 867: 857: 812: 808: 797: 752: 748: 737: 700: 696: 685: 650: 646: 587: 583: 573: 546: 542: 532: 518: 476: 472: 466: 452: 438: 424: 379: 375: 365: 351: 212: 196: 188: 172: 165: 152:Hidde Ploegh 137: 121: 106: 93: 92: 78:Institutions 755:(1): 8539. 647:Cancer Cell 203:Carfilzomib 156:proteolysis 1497:Categories 1098:(3): 231. 327:References 303:1401-1412. 291:2515-2530. 287:7896-7901. 191:HPLC-based 58:Alma mater 134:Education 109:ubiquitin 47:Education 1472:29045389 1411:22118674 1369:34636321 1318:37385347 1309:10400906 1269:32636217 1220:38632987 1211:11022047 1190:iScience 1171:33214684 1122:37002195 1113:10066380 1073:21362556 1032:26455393 983:25623341 957:(1): 8. 931:20553488 890:12401499 849:31555637 789:29867102 729:20463814 677:22975377 624:25590432 584:PLOS ONE 565:16140960 493:12200049 416:10954757 307:345-358. 299:609-615. 283:268-276. 113:protease 1463:6029662 1442:Bibcode 1360:8553340 1260:7362391 1162:7884788 1023:4643306 974:4320819 840:6727631 817:Bibcode 815:: 592. 780:5986744 757:Bibcode 720:2865525 668:3478134 615:4295869 592:Bibcode 384:Bibcode 199:Velcade 1470:  1460:  1434:Nature 1409:  1367:  1357:  1316:  1306:  1267:  1257:  1218:  1208:  1169:  1159:  1120:  1110:  1071:  1030:  1020:  981:  971:  929:  888:  847:  837:  787:  777:  727:  717:  675:  665:  622:  612:  563:  491:  414:  404:  179:Pfizer 162:Career 1430:(PDF) 1337:eLife 407:27648 295:6(5). 232:USP18 228:USP47 220:OTUB1 1468:PMID 1407:PMID 1365:PMID 1314:PMID 1265:PMID 1216:PMID 1167:PMID 1118:PMID 1069:PMID 1028:PMID 979:PMID 927:PMID 886:PMID 845:PMID 785:PMID 725:PMID 673:PMID 620:PMID 561:PMID 489:PMID 412:PMID 237:USP7 226:and 224:USP4 111:and 1458:PMC 1450:doi 1438:550 1397:doi 1355:PMC 1345:doi 1304:PMC 1296:doi 1255:PMC 1247:doi 1206:PMC 1198:doi 1157:PMC 1149:doi 1145:124 1108:PMC 1100:doi 1059:doi 1018:PMC 1010:doi 969:PMC 959:doi 917:doi 913:277 876:doi 835:PMC 825:doi 775:PMC 765:doi 715:PMC 705:doi 663:PMC 655:doi 610:PMC 600:doi 551:doi 481:doi 402:PMC 392:doi 314:88. 1499:: 1466:. 1456:. 1448:. 1436:. 1432:. 1405:. 1393:18 1391:. 1387:. 1363:. 1353:. 1343:. 1341:10 1339:. 1335:. 1312:. 1302:. 1292:22 1290:. 1286:. 1263:. 1253:. 1241:. 1237:. 1214:. 1204:. 1194:27 1192:. 1188:. 1165:. 1155:. 1143:. 1139:. 1116:. 1106:. 1096:14 1094:. 1090:. 1067:. 1055:41 1053:. 1049:. 1026:. 1016:. 1006:60 1004:. 1000:. 977:. 967:. 955:14 953:. 949:. 925:. 911:. 907:. 884:. 870:. 866:. 843:. 833:. 823:. 811:. 807:. 783:. 773:. 763:. 751:. 747:. 723:. 713:. 699:. 695:. 671:. 661:. 651:22 649:. 645:. 632:^ 618:. 608:. 598:. 588:10 586:. 582:. 559:. 547:65 545:. 541:. 501:^ 487:. 477:39 475:. 410:. 400:. 390:. 380:97 378:. 374:. 334:^ 322:7. 318:8. 201:, 181:. 130:. 104:. 1474:. 1452:: 1444:: 1413:. 1399:: 1371:. 1347:: 1320:. 1298:: 1271:. 1249:: 1243:3 1222:. 1200:: 1173:. 1151:: 1124:. 1102:: 1075:. 1061:: 1034:. 1012:: 985:. 961:: 933:. 919:: 892:. 878:: 872:9 851:. 827:: 819:: 813:7 791:. 767:: 759:: 753:8 731:. 707:: 701:6 679:. 657:: 626:. 602:: 594:: 567:. 553:: 526:. 512:. 495:. 483:: 460:. 446:. 432:. 418:. 394:: 386:: 359:. 345:.

Index


Alma mater
Swiss Federal Institute of Technology
Ludwig Institute for Cancer Research
University of Oxford
Mass Spectrometry
University of Oxford
ubiquitin
protease
translational research
British Mass Spectrometry Society
American Association for Cancer Research
Swiss Federal Institute of Technology
Ludwig Institute for Cancer Research
Harvard Medical School
Hidde Ploegh
proteolysis
United Kingdom
deubiquitylating enzymes
Pfizer
HPLC-based
Velcade
Carfilzomib
Multiple Myeloma
chemoproteomics
OTUB1
USP4
USP47
USP18
USP7

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