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is a series of interactions among molecules in a cell that leads to a certain product or a change in a cell. Such a pathway can trigger the assembly of new molecules, such as a fat or protein. Pathways can also turn genes on and off, or spur a cell to move. Some of the most common biological
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is a database of observed post-translational modifications in human and mouse proteins; an online systems biology resource providing comprehensive information and tools for the study of protein post-translational modifications (PTMs) including phosphorylation, ubiquitination, acetylation and
143:(CTD) is a public website and research tool that curates scientific data describing relationships between chemicals/drugs, genes/proteins, diseases, taxa, phenotypes, GO annotations, pathways, and interaction modules; CTD illuminates how environmental chemicals affect human health.
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is a centralized platform to visually depict and integrate information pertaining to domain architecture, post-translational modifications, interaction networks and disease association for each protein in the human proteome (the last release was #9 in
113:(Protein ANalysis THrough Evolutionary Relationships) is a large curated biological database of gene/protein families and their functionally related subfamilies that can be used to classify and identify the function of gene products.
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is a network viewer and builder that allows to import pathways from the biomodels database or from biogrid, flybase pombase and see what drugs interact with the proteins in your network.
119:(TRANScription FACtor database) is a manually curated database of eukaryotic transcription factors, their genomic binding sites and DNA binding profiles (provided by geneXplain GmbH).
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is a free biomedical database of human cellular signaling pathways (new official name: NCI Nature
Pathway Interaction Database: Pathway, synonym: PID).
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is a community curated pathway database using the "wiki" concept. All pathways have an open license and can be freely used.
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is a comprehensive, high-quality, freely accessible, online database containing information on drugs and drug targets.
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language to convert, integrate and query other biological pathway and interaction databases.
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Pathway database is a popular pathway search database highly used by biologists.
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is a free and manually curated online database of biological pathways.
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is an assortment of organism specific
Pathway/Genome Databases.
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33:. Pathways play a key role in advanced studies of
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40:Most common types of biological pathways:
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85:NCI-Nature Pathway Interaction Database
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149:is a project and database that uses
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141:Comparative Toxicogenomics Database
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196:"Biological Pathways Fact Sheet"
104:Human Protein Reference Database
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27:regulation of gene expression
55:Signal transduction pathway
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98:BioCyc database collection
21:pathways are involved in
31:transmission of signals
169:Cysteine metabolism
61:Pathways databases
18:biological pathway
215:Molecular biology
45:Metabolic pathway
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174:Pathway analysis
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147:Pathway commons
91:PhosphoSitePlus
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50:Genetic pathway
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164:Proteostasis
94:methylation.
73:WikiPathways
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123:MiRTarBase
23:metabolism
209:Category
158:See also
129:DrugBank
117:TRANSFAC
79:Reactome
35:genomics
29:and the
180:Sources
111:PANTHER
151:BioPAX
107:2010).
25:, the
135:esyN
67:KEGG
211::
187:^
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16:A
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