90:
182:, where the constituent systems (Service providers) offer “resources” (namely services and by them data, computing, storage) assembled together to implement the overall set of D4Science services. In particular, D4Science aggregates “domain agnostic” service providers as well as community-specific ones to build a unifying space where the aggregated resources can be exploited via Virtual research Environments and their services.
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application (and a set of application programming interfaces (APIs)): (a) comprising several applications organised in specific menu items and (b) running in a plain web browser. Every application is providing VRE users with facilities implemented by relying on one or more services provisioned by diverse providers. Among the basic services every VRE is equipped with there are
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by design. D4Science-based VREs are web-based, community-oriented, collaborative, user-friendly, open-science-enabler working environments for scientists and practitioners willing to work together to perform a set of (research) task. From the end-user perspective, each VRE manifests in a unifying web
349:
enabling to perform statistical computing tasks in the cloud. This RStudio environment is (i) preconfigured with libraries and packages to ease the execution of common data analytics tasks, and (ii) provides seamless access to the VRE Workspace enabling sharing of resources with other members of the
461:
research and innovation programme the maturity level of the D4Science infrastructure was high enough to allow a large and very diverse set of communities of practice to benefit from it and its services and further contribute to its development. Moreover, the services offered by the infrastructure
403:
Engagement within the D4Science community is robust, with users benefiting from user-friendly application environments tailored to their specific needs. The platform allows users to securely preserve, access, and share their data from anywhere, fostering a collaborative and inclusive research
760:
Assante, M.; Boizet, A.; Candela, L.; Castelli, D.; Cirillo, R.; Coro, G.; Fernández, E.; Filter, M.; Frosini, L.; Georgiev, T.; Kakaletris, G.; Katsivelis, P.; Knapen, R.; Lelii, L.; Lokers, R. M.; Mangiacrapa, F.; Manouselis, N.; Pagano, P.; Panichi, G.; Penev, L.; Sinibaldi, F. (2020).
325:. The platform enacts tasks execution by a distributed and hybrid computing infrastructure. Moreover, one of the worth highlighting feature of this platform is its open science-friendliness. All the analytics methods integrated in it are exposed by a standard protocol (the
370:
instances. Each
JupyterLab is (i) preconfigured with libraries and packages to ease the execution of common data analytics tasks, and (ii) provides access to the VRE Workspace enabling sharing of resources with other members of the same working
1180:
329:) clients can use to get informed on available methods as well as to start processes, monitor their execution and access results. Every analytics task performed by the platform automatically produces a provenance record catering for the
1160:
970:; Blanquer, I.; Braga-Neto, R.; Candela, L.; Castelli, D.; Flann, C.; De Giovanni, R.; Gray, W. A.; Jones, A.; Lezzi, D.; Pagano, P.; Perez-Canhos, V.; Quevedo, F.; Rafanell, R.; Rebello, V.; Sousa-Baena, M. S.; Torres, E. (2015).
453:
the development of the D4Science initiative. In this period the infrastructure was established and developed to serve communities of practices from domains ranging from Earth
Science to Marine Science with worldwide scope
450:
435:
423:. These diverse applications demonstrate the versatility and broad applicability of the D4Science Infrastructure, making it an invaluable resource for researchers across various scientific domains.
404:
environment. Additionally, groups of users can create their own virtual environments and customise them with the applications they need, further enhancing the platform's flexibility and usability.
600:
Assante, M.; Candela, L.; Castelli, D.; Cirillo, R.; Coro, G.; Dell'Amico, A.; Frosini, L.; Lelii, L.; Lettere, M.; Mangiacrapa, F.; Pagano, P.; Panichi, G.; Sinibaldi, F.; Sinibaldi, F. (2019).
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either by relying on methods provided by the user or by others. It is endowed with importing and sharing facilities for analytics methods implemented in heterogeneous forms including
639:
Assante, M.; Candela, L.; Castelli, D.; Cirillo, R.; Coro, G.; Frosini, L.; Lelii, L.; Mangiacrapa, F.; Marioli, V.; Pagano, P.; Panichi, G.; Perciante, C.; Sinibaldi, F. (2019).
400:. This extensive infrastructure not only supports a diverse range of scientific communities but also fosters significant engagement and collaboration among researchers worldwide.
2030:
1323:
843:
Jeffery, K.; Candela, L.; Glaves, E. (2020). "Virtual
Research Environments for Environmental and Earth Sciences: Approaches and Experiences". In Zhao, Z.; Hellström, M. (eds.).
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area enabling collaborative and open discussions on any topic and disseminating information of interest for the community, for example, the availability of a research outcome;
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Candela, L.; Akal, F.; Avancini, H.; Castelli, D.; Fusco, L.; Guidetti, V.; Langguth, C.; Manzi, A.; Pagano, P.; Schuldt, H.; Simi, M.; Springmann, M.; Voicu, L. (2007).
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the
European initiative to shift scholarly communication towards openness and transparency and to facilitate innovative ways to communicate and monitor research.
717:
Candela, L.; Coro, G.; Lelii, L.; Pagano, P.; Panichi, G. (2020). "Data
Processing and Analytics for Data-Centric Sciences". In Zhao, Z.; Hellström, M. (eds.).
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Assante, M.; Candela, L.; Castelli, D.; Cirillo, R.; Coro, G.; Frosini, L.; Lelii, L.; Mangiacrapa, F.; Pagano, P.; Panichi, G.; Sinibaldi, F. (2019).
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The operation and improvement of the D4Science infrastructure facilities are still ongoing while its exploitation is progressively growing.
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technologies and resources was conceived and developed to serve the needs of communities of practice involved in knowledge development.
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with a dedicated working environment supporting any knowledge production process in a collaborative way, in fact every VRE enables
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recording the assets worth being published thus to make it possible for others to be informed and make use of these assets.
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the
European initiative for creating an environment for hosting and processing research data and promote open science.
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for storing, organizing and sharing any version of a research artifact, including dataset and model implementation;
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the e-Infrastructure set up to provide advanced computing and data analytics services for research and innovation.
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929:"DILIGENT: integrating digital library and Grid technologies for a new Earth observation research infrastructure"
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2015:
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763:"Realizing virtual research environments for the agri-food community: The AGINFRA PLUS experience"
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The D4Science initiative has been developed and supported by several
European-funded projects.
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2005:
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Coro, G.; Gonzalez Vilas, L.; Magliozzi, C.; Ellenbroek, A.; Scarponi, P.; Pagano, P. (2018).
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680:"Cloud computing in a distributed e-infrastructure using the web processing service standard"
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888:"Forecasting the ongoing invasion of Lagocephalus sceleratus in the Mediterranean Sea"
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Grossi, V.; Giannotti, F.; Pedreschi, D.; Manghi, P.; Pagano, P.; Assante, M. (2021).
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972:"Supporting biodiversity studies with the EUBrazilOpenBio Hybrid Data Infrastructure"
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Seventh
Framework Programme for research, technological development and demonstration
1005:
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2020:
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Towards
Interoperable Research Infrastructures for Environmental and Earth Sciences
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Towards
Interoperable Research Infrastructures for Environmental and Earth Sciences
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168:. In particular, it supports communities of practice willing to implement
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1623:
1283:
1124:
641:"The gCube system: Delivering Virtual Research Environments as-a-Service"
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849:. Lecture Notes in Computer Science. Vol. 12003. pp. 272–289.
828:
723:. Lecture Notes in Computer Science. Vol. 12003. pp. 176–191.
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513:"The D4Science Experience on Virtual Research Environments Development"
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was the forerunner where a testbed infrastructure built by integrating
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602:"Virtual research environments co-creation: The D4Science experience"
436:
Sixth Framework Programme for Research and Technological Development
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458:
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2025:
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1538:
1019:
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15:
142:
802:"Data science: a game changer for science and innovation"
678:
Coro, G.; Panichi, G.; Scarponi, P.; Pagano, P. (2017).
39:
1324:
Scholarly Publishing and Academic Resources Coalition
556:
554:
976:
Concurrency and Computation: Practice and Experience
767:
Concurrency and Computation: Practice and Experience
684:
Concurrency and Computation: Practice and Experience
606:
Concurrency and Computation: Practice and Experience
50:, and by adding encyclopedic content written from a
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International Journal of Data Science and Analytics
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187:Istituto di Scienza e Tecnologie dell'Informazione
109:Istituto di Scienza e Tecnologie dell'Informazione
196:At the earth of this infrastructure there is an
302:proprietary data analytics platform (DataMiner)
511:Candela, L.; Castelli, D.; Pagano, P. (2023).
2253:
1550:
1031:
8:
1279:Open Access Scholarly Publishing Association
82:
407:Supported communities and cases range from
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2246:
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1741:
1582:
1557:
1543:
1535:
1038:
1024:
1016:
933:International Journal on Digital Libraries
88:
81:
995:
911:
827:
817:
218:Virtual Research Environment as a Service
70:Learn how and when to remove this message
503:
517:Computing in Science & Engineering
162:offering services by community-driven
31:contains content that is written like
7:
2963:
1319:Registry of Open Access Repositories
563:"Enacting open science by D4Science"
382:The D4Science Infrastructure serves
227:computer-supported cooperative work
185:This organization is hosted by the
645:Future Generation Computer Systems
567:Future Generation Computer Systems
257:for managing membership and roles;
14:
2379:Distributed file system for cloud
2308:Integration platform as a service
1269:Directory of Open Access Journals
385:more than 24,000 registered users
191:National Research Council (Italy)
175:. The infrastructure follows the
2962:
2951:
2950:
20:
1156:Budapest Open Access Initiative
913:10.1016/j.ecolmodel.2018.01.007
462:have been developed to support
158:is an organisation operating a
2938:Virtual Private Cloud OnDemand
1255:Directory of Open Access Books
342:-based development environment
296:for data analytics including:
1:
2135:Open-source software movement
1864:Free and open-source software
1593:Commons-based peer production
1274:Initiative for Open Citations
362:for developing and executing
286:virtual research environments
165:virtual research environments
120:Virtual Research Environments
1476:List of open-access journals
1466:Access to Knowledge movement
1105:Copyright transfer agreement
855:10.1007/978-3-030-52829-4_15
729:10.1007/978-3-030-52829-4_10
657:10.1016/j.future.2018.10.035
579:10.1016/j.future.2019.05.063
485:European Grid Infrastructure
434:DILIGENT (2004-2007) in the
273:Science Gateway as a Service
2303:Infrastructure as a service
1227:Delayed open-access journal
1090:Subscription business model
479:European Open Science Cloud
359:-based notebook environment
331:reproducibility of the task
3012:
2213:Open educational resources
1222:Hybrid open-access journal
819:10.1007/s41060-020-00240-2
284:hosting a selected set of
2946:
2763:Abiquo Enterprise Edition
2001:Open Knowledge Foundation
1991:Open Architecture Network
1808:Open-door academic policy
1484:
1309:Public Library of Science
1294:Open Knowledge Foundation
1135:Article processing charge
1053:
945:10.1007/s00799-007-0023-8
537:10.1109/MCSE.2023.3290433
350:same working environment.
254:User Management dashboard
87:
2399:Native cloud application
1986:Free Software Foundation
1899:Open-source architecture
1314:Public Knowledge Project
1299:Open Society Foundations
1289:Open Archives Initiative
1186:NIH Public Access Policy
2923:Virtual Machine Manager
2384:Hardware virtualization
1949:Politics and governance
293:Data Analytics at scale
2394:Mobile cloud computing
2364:Cloud storage gateways
2354:Cloud-native computing
2120:Free software movement
2011:Open Source Initiative
1961:Open-source governance
1844:Open-source journalism
1217:Open-access repository
457:In the context of the
449:In the context of the
388:(August 2024) through
2439:Virtual private cloud
2333:Software as a service
2328:Security as a service
2323:Platform as a service
2298:Function as a service
2125:Open science movement
2115:Free-culture movement
1793:Educational resources
1752:Collaborative writing
1629:Participatory culture
1245:The Cost of Knowledge
364:interactive computing
278:community of practice
223:community of practice
52:neutral point of view
2419:Serverless computing
2318:Network as a service
2313:Backend as a service
2293:Desktop as a service
2283:Content as a service
1904:Open-source hardware
1882:Open-design movement
1875:Open-source software
1643:Research and science
1140:Predatory publishing
892:Ecological Modelling
198:Open Source Software
2758:Amazon Web Services
2580:Amazon Web Services
2186:Free Cultural Works
2130:Open Source Ecology
2016:Open Web Foundation
1913:Economic principles
1870:Free/libre software
1767:Participatory media
1395:Republic of Ireland
1212:Open-access mandate
904:2018EcMod.371...37C
529:2023CSE....25b..12C
413:Social Data Science
397:20 Science gateways
160:Data Infrastructure
84:
44:promotional content
2715:SAP Cloud Platform
2424:Structured storage
2052:Alexandra Elbakyan
1996:Openmod Initiative
1833:Citizen journalism
1710:Open communication
1691:Data, information,
1614:Open collaboration
1191:Research Works Act
1181:Geneva Declaration
1166:Bethesda Statement
1161:Berlin Declaration
1115:Scientific journal
212:D4Science offers:
46:and inappropriate
2978:
2977:
2630:Google App Engine
2429:Virtual appliance
2288:Data as a service
2235:
2234:
2231:
2230:
2223:Open Web movement
2208:Open Data Indices
2062:Peter Murray-Rust
2006:Open Rights Group
1969:
1968:
1852:
1851:
1705:Knowledge commons
1532:
1531:
1095:Subscribe to Open
864:978-3-030-52828-7
738:978-3-030-52828-7
280:with a dedicated
263:Catalogue Service
236:Social Networking
178:system of systems
153:
152:
80:
79:
72:
3003:
2966:
2965:
2954:
2953:
2898:Safe Swiss Cloud
2262:
2255:
2248:
2239:
2218:Open music model
2182:Definition docs
2171:Creative Commons
2156:
2072:Richard Stallman
2067:Douglas Rushkoff
1981:Creative Commons
1757:Democratic media
1742:
1665:Notebook science
1583:
1559:
1552:
1545:
1536:
1265:
1262:
1250:Creative Commons
1176:Durham Statement
1110:Academic journal
1040:
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988:10.1002/cpe.3238
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696:10.1002/cpe.4219
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618:10.1002/cpe.6925
597:
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558:
549:
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327:OGC WPS protocol
149:
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132:e-infrastructure
124:Science Gateways
92:
85:
75:
68:
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33:an advertisement
24:
23:
16:
3011:
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3001:
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2996:Cloud computing
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2893:Rackspace Cloud
2843:Microsoft Azure
2739:
2660:Microsoft Azure
2561:
2443:
2337:
2276:Business models
2271:
2269:Cloud computing
2266:
2236:
2227:
2154:
2102:
2096:
2057:Lawrence Lessig
2047:Tim Berners-Lee
2035:
1965:
1956:Open government
1944:
1940:Sharing economy
1925:Open innovation
1908:
1848:
1837:Wiki journalism
1816:
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1762:Open publishing
1737:
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1692:
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1650:Citizen science
1638:
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1504:Open government
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1471:Access2Research
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440:digital library
429:
391:177 active VREs
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307:analytics tasks
282:science gateway
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128:cloud computing
76:
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2745:Infrastructure
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2695:PythonAnywhere
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444:grid computing
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48:external links
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417:Earth Science
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29:This article
27:
18:
17:
2968:
2955:
2883:Oracle Cloud
2803:Google Cloud
2783:DigitalOcean
2773:Citrix Cloud
2675:Oracle Cloud
2527:Proton Drive
2517:Oracle Cloud
2449:Applications
2369:Data centers
2342:Technologies
2101:Projects and
2087:Aaron Swartz
2021:Pirate Party
1920:Gift economy
1700:Free content
1675:Science data
1655:Open science
1607:
1603:
1586:Key concepts
1577:Concepts and
1570:open content
1566:Free culture
1519:Open science
1489:Open content
1435:South Africa
1236:Projects and
1083:
1079:
979:
975:
968:Badia, R. M.
966:Amaral, R.;
961:
936:
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829:11384/137137
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566:
523:(2): 12–19.
520:
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468:
466:practices.
464:open science
456:
448:
433:
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394:offered via
390:
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371:environment.
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276:providing a
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217:
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202:gCube system
195:
184:
176:
171:open science
169:
163:
155:
154:
105:Headquarters
66:
57:
42:by removing
38:Please help
30:
2808:GreenButton
2615:Engine Yard
2201:Open Source
2145:OpenWetWare
2082:Peter Sunde
2077:Peter Suber
1930:Open patent
1894:Open gaming
1772:Peer review
1619:Open source
1524:Open source
1410:New Zealand
1405:Netherlands
1258: [
1047:Open access
997:10251/62543
773:(19): n.a.
651:: 445–453.
573:: 555–563.
305:to execute
2985:Categories
2928:Wakame-vdc
2913:libguestfs
2873:OpenNebula
2813:GreenQloud
2793:Eucalyptus
2768:CloudStack
2730:vCloud Air
2700:RightScale
2680:OutSystems
2665:MindSphere
2635:GreenQloud
2537:Salesforce
2500:Office 365
2404:Networking
1821:Journalism
1803:Admissions
1798:University
1338:By country
1200:Strategies
1149:Statements
1120:Manuscript
498:References
368:JupyterLab
145:.d4science
40:improve it
2991:E-Science
2878:OpenStack
2838:Lunacloud
2818:IBM Cloud
2788:EMC Atmos
2735:WaveMaker
2710:Force.com
2690:OpenShift
2645:IBM Cloud
2625:GE Predix
2595:CloudBolt
2567:Platforms
2547:PlateSpin
2532:Rackspace
2512:Nextcloud
2495:Microsoft
2490:IBM Cloud
2472:Workspace
2140:OpenCores
2103:movements
2040:Activists
1781:Education
1579:practices
1494:Open data
1345:Australia
1130:Postprint
898:: 37–49.
873:220795026
787:229459865
747:220794538
626:247426120
587:192644104
545:259713679
409:Agri-food
378:Community
245:Workspace
173:practices
156:D4Science
100:D4Science
83:D4Science
60:June 2024
2957:Category
2848:Mirantis
2655:Jelastic
2585:AppScale
2522:Owncloud
2505:OneDrive
2486:(closed)
2484:HP Cloud
2434:Web APIs
2414:Security
2389:Internet
2166:Licenses
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