Knowledge (XXG)

Dynamic Bayesian network

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36: 20: 626: 28: 571:(GMTK): an open-source, publicly available toolkit for rapidly prototyping statistical models using dynamic graphical models (DGMs) and dynamic Bayesian networks (DBNs). GMTK can be used for applications and research in speech and language processing, bioinformatics, activity recognition, and any time-series application. 59:
A dynamic Bayesian network (DBN) is often called a "two-timeslice" BN (2TBN) because it says that at any point in time T, the value of a variable can be calculated from the internal regressors and the immediate prior value (time T-1). DBNs were developed by
597:: C++ library that provides implementations of various (approximate) inference methods for discrete graphical models; supports arbitrary factor graphs with discrete variables, including discrete Markov Random Fields and Bayesian Networks (released under the 613:: Matlab toolbox for contextualization of DBNs models of regulatory networks with biological quantitative data, including various regularization schemes to model prior biological knowledge (released under the GPLv3) 316: 667: 607:: C++ library (with Python bindings) for different types of PGMs including Bayesian Networks and Dynamic Bayesian Networks (released under the GPLv3) 476: 339: 125:
DBNs are conceptually related to probabilistic Boolean networks and can, similarly, be used to model dynamical systems at steady-state.
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Simplified Dynamic Bayesian Network. All the variables do not need to be duplicated in the graphical model, but they are dynamic, too.
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into a general probabilistic representation and inference mechanism for arbitrary nonlinear and non-normal time-dependent domains.
176: 660: 387:"Relationships between probabilistic Boolean networks and dynamic Bayesian networks as models of gene regulatory networks" 134: 139: 686: 588: 568: 562: 691: 653: 35: 491: 454: 587:: Modeling gene regulatory network via global optimization of dynamic bayesian network (released under a 524: 144: 19: 374: 625: 370: 378: 213: 115: 382: 496: 459: 81: 65: 282: 249: 209: 201: 168: 96: 278: 245: 197: 164: 61: 68:'s Section on Medical Informatics. Dagum developed DBNs to unify and extend traditional linear 27: 472: 416: 329: 308: 100: 69: 637: 510: 464: 406: 398: 225: 48: 290: 598: 537: 411: 386: 111: 680: 325: 230: 119: 73: 439: 312: 286: 253: 205: 172: 257: 577: : Inferring Dynamic Bayesian Networks with MCMC, for Matlab (free software) 402: 265:
Knowledge Systems Laboratory. Section on Medical Informatics, Stanford University
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Proceedings of the Eighth Conference on Uncertainty in Artificial Intelligence
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Proceedings of the Ninth Conference on Uncertainty in Artificial Intelligence
420: 258:"Temporal Probabilistic Reasoning: Dynamic Network Models for Forecasting" 88: 358:(which include hidden Markov models and Kalman filters as special cases) 610: 561:: the Bayes Net Toolbox for Matlab, by Kevin Murphy, (released under a 468: 453:. Lecture Notes in Computer Science. Vol. 1387. pp. 168–197. 104: 580: 507:"Dynamic Bayesian Network Modeling, Learning, and Inference: A Survey" 51:(BN) which relates variables to each other over adjacent time steps. 558: 554: 34: 26: 18: 449:
Ghahramani, Zoubin (1998). "Learning dynamic Bayesian networks".
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Dynamic Bayesian Networks: Representation, Inference and Learning
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Shiguihara, P.; De Andrade Lopes, A.; Mauricio, D. (2021).
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Learning the structure of dynamic probabilistic networks
641: 291:"Forecasting Sleep Apnea with Dynamic Network Models" 451:
Adaptive Processing of Sequences and Data Structures
95:applications. For example, they have been used in 23:Dynamic Bayesian Network composed by 3 variables. 91:, and have shown potential for a wide range of 76:, linear and normal forecasting models such as 486:Friedman, N.; Murphy, K.; Russell, S. (1998). 661: 490:. UAI’98. Morgan Kaufmann. pp. 139–147. 8: 31:Bayesian Network developed on 3 time steps. 668: 654: 318:Artificial Intelligence: A Modern Approach 514: 495: 458: 444:. UC Berkeley, Computer Science Division. 410: 229: 177:"Dynamic Network Models for Forecasting" 156: 533: 522: 214:"Uncertain Reasoning and Forecasting" 80:and simple dependency models such as 7: 622: 620: 218:International Journal of Forecasting 640:. You can help Knowledge (XXG) by 14: 624: 114:. DBN is a generalization of 1: 135:Recursive Bayesian estimation 16:Probabilistic graphical model 403:10.1016/j.sigpro.2005.06.008 231:10.1016/0169-2070(94)02009-e 516:10.1109/ACCESS.2021.3105520 140:Probabilistic logic network 708: 619: 87:Today, DBNs are common in 356:dynamic Bayesian networks 581:GlobalMIT Matlab toolbox 569:Graphical Models Toolkit 45:dynamic Bayesian network 636:-related article is a 532:Cite journal requires 438:Murphy, Kevin (2002). 64:in the early 1990s at 40: 32: 24: 145:Generalized filtering 38: 30: 22: 297:. AUAI Press: 64–71. 186:. AUAI Press: 41–48. 116:hidden Markov models 82:hidden Markov models 66:Stanford University 469:10.1007/BFb0053999 345:on 20 October 2014 324:(Third ed.). 97:speech recognition 70:state-space models 41: 33: 25: 687:Bayesian networks 649: 648: 478:978-3-540-64341-8 391:Signal Processing 375:Sampsa Hautaniemi 101:digital forensics 699: 692:Statistics stubs 670: 663: 656: 628: 621: 541: 535: 530: 528: 520: 518: 501: 499: 482: 462: 445: 425: 424: 414: 371:Harri Lähdesmäki 367: 361: 360: 352: 350: 344: 338:. Archived from 323: 305: 299: 298: 275: 269: 268: 262: 242: 236: 235: 233: 194: 188: 187: 181: 161: 49:Bayesian network 707: 706: 702: 701: 700: 698: 697: 696: 677: 676: 675: 674: 617: 599:FreeBSD license 551: 545: 531: 521: 509:. IEEE Access. 504: 485: 479: 448: 437: 434: 432:Further reading 429: 428: 379:Ilya Shmulevich 369: 368: 364: 348: 346: 342: 336: 328:. p. 566. 321: 307: 306: 302: 277: 276: 272: 260: 244: 243: 239: 196: 195: 191: 179: 163: 162: 158: 153: 131: 57: 17: 12: 11: 5: 705: 703: 695: 694: 689: 679: 678: 673: 672: 665: 658: 650: 647: 646: 629: 615: 614: 608: 602: 592: 578: 572: 566: 550: 547: 543: 542: 534:|journal= 502: 497:10.1.1.75.2969 483: 477: 460:10.1.1.56.7874 446: 433: 430: 427: 426: 397:(4): 814–834. 383:Olli Yli-Harja 362: 335:978-0136042594 334: 309:Stuart Russell 300: 270: 237: 189: 155: 154: 152: 149: 148: 147: 142: 137: 130: 127: 120:Kalman filters 112:bioinformatics 74:Kalman filters 56: 53: 15: 13: 10: 9: 6: 4: 3: 2: 704: 693: 690: 688: 685: 684: 682: 671: 666: 664: 659: 657: 652: 651: 645: 643: 639: 635: 630: 627: 623: 618: 612: 609: 606: 603: 600: 596: 593: 590: 586: 582: 579: 576: 573: 570: 567: 564: 560: 556: 553: 552: 548: 546: 539: 526: 517: 512: 508: 503: 498: 493: 489: 484: 480: 474: 470: 466: 461: 456: 452: 447: 443: 442: 436: 435: 431: 422: 418: 413: 408: 404: 400: 396: 392: 388: 384: 380: 376: 372: 366: 363: 359: 357: 341: 337: 331: 327: 326:Prentice Hall 320: 319: 314: 310: 304: 301: 296: 292: 288: 284: 280: 274: 271: 266: 259: 256:(June 1991). 255: 251: 247: 241: 238: 232: 227: 223: 219: 215: 211: 207: 203: 199: 193: 190: 185: 178: 174: 170: 166: 160: 157: 150: 146: 143: 141: 138: 136: 133: 132: 128: 126: 123: 121: 117: 113: 109: 106: 102: 98: 94: 90: 85: 83: 79: 75: 71: 67: 63: 54: 52: 50: 46: 37: 29: 21: 642:expanding it 631: 616: 544: 525:cite journal 487: 450: 440: 394: 390: 365: 355: 354: 347:. Retrieved 340:the original 317: 313:Peter Norvig 303: 294: 287:Eric Horvitz 273: 264: 254:Eric Horvitz 240: 224:(1): 73–87. 221: 217: 206:Eric Horvitz 192: 183: 173:Eric Horvitz 159: 124: 86: 58: 44: 42: 589:GPL license 585:Google Code 563:GPL license 283:Adam Galper 250:Adam Galper 210:Adam Seiver 202:Adam Galper 169:Adam Galper 93:data mining 47:(DBN) is a 681:Categories 634:statistics 349:22 October 279:Paul Dagum 246:Paul Dagum 198:Paul Dagum 165:Paul Dagum 151:References 108:sequencing 62:Paul Dagum 492:CiteSeerX 455:CiteSeerX 549:Software 421:17415411 385:(2006). 315:(2010). 289:(1993). 212:(1995). 175:(1992). 129:See also 89:robotics 72:such as 412:1847796 105:protein 55:History 611:FALCON 595:libDAI 575:DBmcmc 559:GitHub 494:  475:  457:  419:  409:  332:  110:, and 632:This 605:aGrUM 343:(PDF) 322:(PDF) 261:(PDF) 180:(PDF) 638:stub 538:help 473:ISBN 417:PMID 351:2014 330:ISBN 118:and 78:ARMA 583:at 557:on 555:bnt 511:doi 465:doi 407:PMC 399:doi 226:doi 683:: 529:: 527:}} 523:{{ 471:. 463:. 415:. 405:. 395:86 393:. 389:. 381:; 377:; 373:; 353:. 311:; 293:. 285:; 281:; 263:. 252:; 248:; 222:11 220:. 216:. 208:; 204:; 200:; 182:. 171:; 167:; 122:. 103:, 99:, 43:A 669:e 662:t 655:v 644:. 601:) 591:) 565:) 540:) 536:( 519:. 513:: 500:. 481:. 467:: 423:. 401:: 267:. 234:. 228::

Index




Bayesian network
Paul Dagum
Stanford University
state-space models
Kalman filters
ARMA
hidden Markov models
robotics
data mining
speech recognition
digital forensics
protein
sequencing
bioinformatics
hidden Markov models
Kalman filters
Recursive Bayesian estimation
Probabilistic logic network
Generalized filtering
Paul Dagum
Adam Galper
Eric Horvitz
"Dynamic Network Models for Forecasting"
Paul Dagum
Adam Galper
Eric Horvitz
Adam Seiver

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