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Hidden Markov model

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3767:) controls the relative density or sparseness of the resulting transition matrix. A choice of 1 yields a uniform distribution. Values greater than 1 produce a dense matrix, in which the transition probabilities between pairs of states are likely to be nearly equal. Values less than 1 result in a sparse matrix in which, for each given source state, only a small number of destination states have non-negligible transition probabilities. It is also possible to use a two-level prior Dirichlet distribution, in which one Dirichlet distribution (the upper distribution) governs the parameters of another Dirichlet distribution (the lower distribution), which in turn governs the transition probabilities. The upper distribution governs the overall distribution of states, determining how likely each state is to occur; its concentration parameter determines the density or sparseness of states. Such a two-level prior distribution, where both concentration parameters are set to produce sparse distributions, might be useful for example in 3510: 3501:(MCMC) sampling are proven to be favorable over finding a single maximum likelihood model both in terms of accuracy and stability. Since MCMC imposes significant computational burden, in cases where computational scalability is also of interest, one may alternatively resort to variational approximations to Bayesian inference, e.g. Indeed, approximate variational inference offers computational efficiency comparable to expectation-maximization, while yielding an accuracy profile only slightly inferior to exact MCMC-type Bayesian inference. 5010: 2743: 6117: 4201:
methods such as the Forward-Backward and Viterbi algorithms, which require knowledge of the joint law of the HMM and can be computationally intensive to learn, the Discriminative Forward-Backward and Discriminative Viterbi algorithms circumvent the need for the observation's law. This breakthrough allows the HMM to be applied as a discriminative model, offering a more efficient and versatile approach to leveraging Hidden Markov Models in various applications.
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the observed data. This information, encoded in the form of a high-dimensional vector, is used as a conditioning variable of the HMM state transition probabilities. Under such a setup, we eventually obtain a nonstationary HMM the transition probabilities of which evolve over time in a manner that is inferred from the data itself, as opposed to some unrealistic ad-hoc model of temporal evolution.
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state and its associated observation; rather, features of nearby observations, of combinations of the associated observation and nearby observations, or in fact of arbitrary observations at any distance from a given hidden state can be included in the process used to determine the value of a hidden state. Furthermore, there is no need for these features to be
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unique label y1, y2, y3, ... . The genie chooses an urn in that room and randomly draws a ball from that urn. It then puts the ball onto a conveyor belt, where the observer can observe the sequence of the balls but not the sequence of urns from which they were drawn. The genie has some procedure to choose urns; the choice of the urn for the
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We can find the most likely sequence by evaluating the joint probability of both the state sequence and the observations for each case (simply by multiplying the probability values, which here correspond to the opacities of the arrows involved). In general, this type of problem (i.e. finding the most
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Finally, a different rationale towards addressing the problem of modeling nonstationary data by means of hidden Markov models was suggested in 2012. It consists in employing a small recurrent neural network (RNN), specifically a reservoir network, to capture the evolution of the temporal dynamics in
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model"). The advantage of this type of model is that arbitrary features (i.e. functions) of the observations can be modeled, allowing domain-specific knowledge of the problem at hand to be injected into the model. Models of this sort are not limited to modeling direct dependencies between a hidden
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The state transition and output probabilities of an HMM are indicated by the line opacity in the upper part of the diagram. Given that we have observed the output sequence in the lower part of the diagram, we may be interested in the most likely sequence of states that could have produced it. Based
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All of the above models can be extended to allow for more distant dependencies among hidden states, e.g. allowing for a given state to be dependent on the previous two or three states rather than a single previous state; i.e. the transition probabilities are extended to encompass sets of three or
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The model suitable in the context of longitudinal data is named latent Markov model. The basic version of this model has been extended to include individual covariates, random effects and to model more complex data structures such as multilevel data. A complete overview of the latent Markov
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of each other, as would be the case if such features were used in a generative model. Finally, arbitrary features over pairs of adjacent hidden states can be used rather than simple transition probabilities. The disadvantages of such models are: (1) The types of prior distributions that can be
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The Markov process itself cannot be observed, only the sequence of labeled balls, thus this arrangement is called a "hidden Markov process". This is illustrated by the lower part of the diagram shown in Figure 1, where one can see that balls y1, y2, y3, y4 can be drawn at each state. Even if the
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possible states, there is a set of emission probabilities governing the distribution of the observed variable at a particular time given the state of the hidden variable at that time. The size of this set depends on the nature of the observed variable. For example, if the observed variable is
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with replacement (where each item from the urn is returned to the original urn before the next step). Consider this example: in a room that is not visible to an observer there is a genie. The room contains urns X1, X2, X3, ... each of which contains a known mix of balls, with each ball having a
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In 2023, two innovative algorithms were introduced for the Hidden Markov Model. These algorithms enable the computation of the posterior distribution of the HMM without the necessity of explicitly modeling the joint distribution, utilizing only the conditional distributions. Unlike traditional
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will have an HMM probability (in the case of the forward algorithm) or a maximum state sequence probability (in the case of the Viterbi algorithm) at least as large as that of a particular output sequence? When an HMM is used to evaluate the relevance of a hypothesis for a particular output
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Consider two friends, Alice and Bob, who live far apart from each other and who talk together daily over the telephone about what they did that day. Bob is only interested in three activities: walking in the park, shopping, and cleaning his apartment. The choice of what to do is determined
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sequence of hidden states that generated a particular sequence of observations (see illustration on the right). This task is generally applicable when HMM's are applied to different sorts of problems from those for which the tasks of filtering and smoothing are applicable. An example is
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in place of a Dirichlet distribution. This type of model allows for an unknown and potentially infinite number of states. It is common to use a two-level Dirichlet process, similar to the previously described model with two levels of Dirichlet distributions. Such a model is called a
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is small, it may be more practical to restrict the nature of the covariances between individual elements of the observation vector, e.g. by assuming that the elements are independent of each other, or less restrictively, are independent of all but a fixed number of adjacent elements.)
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represents Alice's belief about which state the HMM is in when Bob first calls her (all she knows is that it tends to be rainy on average). The particular probability distribution used here is not the equilibrium one, which is (given the transition probabilities) approximately
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placed on hidden states are severely limited; (2) It is not possible to predict the probability of seeing an arbitrary observation. This second limitation is often not an issue in practice, since many common usages of HMM's do not require such predictive probabilities.
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prior distribution over the transition probabilities. However, it is also possible to create hidden Markov models with other types of prior distributions. An obvious candidate, given the categorical distribution of the transition probabilities, is the
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distribution of the categorical distribution. Typically, a symmetric Dirichlet distribution is chosen, reflecting ignorance about which states are inherently more likely than others. The single parameter of this distribution (termed the
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exclusively by the weather on a given day. Alice has no definite information about the weather, but she knows general trends. Based on what Bob tells her he did each day, Alice tries to guess what the weather must have been like.
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corresponding to an observed sequence of words. In this case, what is of interest is the entire sequence of parts of speech, rather than simply the part of speech for a single word, as filtering or smoothing would compute.
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Conversely, there exists a space of subshifts on 6 symbols, projected to subshifts on 2 symbols, such that any Markov measure on the smaller subshift has a preimage measure that is not Markov of any order (Example 2.6 ).
6427:, M. Y. Boudaren, E. Monfrini, and W. Pieczynski, Unsupervised segmentation of random discrete data hidden with switching noise distributions, IEEE Signal Processing Letters, Vol. 19, No. 10, pp. 619-622, October 2012. 4185:, in which an auxiliary underlying process is added to model some data specificities. Many variants of this model have been proposed. One should also mention the interesting link that has been established between the 3818:
of standard HMMs. This type of model directly models the conditional distribution of the hidden states given the observations, rather than modeling the joint distribution. An example of this model is the so-called
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from her. On each day, there is a certain chance that Bob will perform one of the following activities, depending on the weather: "walk", "shop", or "clean". Since Bob tells Alice about his activities, those are the
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represents how likely Bob is to perform a certain activity on each day. If it is rainy, there is a 50% chance that he is cleaning his apartment; if it is sunny, there is a 60% chance that he is outside for a walk.
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Given a Markov transition matrix and an invariant distribution on the states, we can impose a probability measure on the set of subshifts. For example, consider the Markov chain given on the left on the states
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estimate of the parameters of the HMM given the set of output sequences. No tractable algorithm is known for solving this problem exactly, but a local maximum likelihood can be derived efficiently using the
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In the standard type of hidden Markov model considered here, the state space of the hidden variables is discrete, while the observations themselves can either be discrete (typically generated from a
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and which allows to fuse data in Markovian context and to model nonstationary data. Note that alternative multi-stream data fusion strategies have also been proposed in the recent literature, e.g.
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The parameter learning task in HMMs is to find, given an output sequence or a set of such sequences, the best set of state transition and emission probabilities. The task is usually to derive the
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The task is to compute, given the model's parameters and a sequence of observations, the distribution over hidden states of the last latent variable at the end of the sequence, i.e. to compute
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HMMs can be applied in many fields where the goal is to recover a data sequence that is not immediately observable (but other data that depend on the sequence are). Applications include:
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Ng, A., & Jordan, M. (2001). On discriminative vs. generative classifiers: A comparison of logistic regression and naive bayes. Advances in neural information processing systems, 14.
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In the hidden Markov models considered above, the state space of the hidden variables is discrete, while the observations themselves can either be discrete (typically generated from a
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The task is to compute in a best way, given the parameters of the model, the probability of a particular output sequence. This requires summation over all possible state sequences:
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The diagram below shows the general architecture of an instantiated HMM. Each oval shape represents a random variable that can adopt any of a number of values. The random variable
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Alice knows the general weather trends in the area, and what Bob likes to do on average. In other words, the parameters of the HMM are known. They can be represented as follows in
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Azeraf, E., Monfrini, E., Vignon, E., & Pieczynski, W. (2020). Hidden markov chains, entropic forward-backward, and part-of-speech tagging. arXiv preprint arXiv:2005.10629.
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Azeraf, E., Monfrini, E., & Pieczynski, W. (2023). Equivalence between LC-CRF and HMM, and Discriminative Computing of HMM-Based MPM and MAP. Algorithms, 16(3), 173.
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Beal, Matthew J., Zoubin Ghahramani, and Carl Edward Rasmussen. "The infinite hidden Markov model." Advances in neural information processing systems 14 (2002): 577-584.
348: 3686:). Hidden Markov models can also be generalized to allow continuous state spaces. Examples of such models are those where the Markov process over hidden variables is a 2431: 7180: 946: 457: 5026:. In: Proceedings, 4th Stochastic Modeling Techniques and Data Analysis International Conference with Demographics Workshop (SMTDA2016), pp. 295-306. Valletta, 2016. 620: 401: 275: 222: 3398: 2547: 2470: 1526: 1382: 4560: 3911: 2405: 2096:
represents the change of the weather in the underlying Markov chain. In this example, there is only a 30% chance that tomorrow will be sunny if today is rainy. The
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Petropoulos, Anastasios; Chatzis, Sotirios P.; Xanthopoulos, Stylianos (2016). "A novel corporate credit rating system based on Student's-t hidden Markov models".
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A number of related tasks ask about the probability of one or more of the latent variables, given the model's parameters and a sequence of observations
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possible values, modelled as a categorical distribution. (See the section below on extensions for other possibilities.) This means that for each of the
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for short. It was originally described under the name "Infinite Hidden Markov Model" and was further formalized in "Hierarchical Dirichlet Processes".
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Azeraf, E., Monfrini, E., & Pieczynski, W. (2022). Deriving discriminative classifiers from generative models. arXiv preprint arXiv:2201.00844.
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Baum, L.E. (1972). "An Inequality and Associated Maximization Technique in Statistical Estimation of Probabilistic Functions of a Markov Process".
7666: 6000: 3698:); however, in general, exact inference in HMMs with continuous latent variables is infeasible, and approximate methods must be used, such as the 5040: 7381: 7563: 6396: 2742: 7853: 7843: 7366: 6570: 6067: 6039: 5896: 7753: 7717: 4791: 2223: 5354:
Stigler, J.; Ziegler, F.; Gieseke, A.; Gebhardt, J. C. M.; Rief, M. (2011). "The Complex Folding Network of Single Calmodulin Molecules".
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El Zarwi, Feraz (May 2011). "Modeling and Forecasting the Evolution of Preferences over Time: A Hidden Markov Model of Travel Behavior".
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This is similar to filtering but asks about the distribution of a latent variable somewhere in the middle of a sequence, i.e. to compute
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transition probabilities. Note that the set of transition probabilities for transitions from any given state must sum to 1. Thus, the
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Shah, Shalin; Dubey, Abhishek K.; Reif, John (2019-04-10). "Programming Temporal DNA Barcodes for Single-Molecule Fingerprinting".
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problem of MEMM's, and thus may make more accurate predictions. The disadvantage is that training can be slower than for MEMM's.
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Jelinek, F.; Bahl, L.; Mercer, R. (1975). "Design of a linguistic statistical decoder for the recognition of continuous speech".
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M. Lukosevicius, H. Jaeger (2009) Reservoir computing approaches to recurrent neural network training, Computer Science Review
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Teh, Yee Whye, et al. "Hierarchical dirichlet processes." Journal of the American Statistical Association 101.476 (2006).
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Munkhammar, J.; Widén, J. (Aug 2018). "A Markov-chain probability distribution mixture approach to the clear-sky index".
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Sipos, I. RĂłbert; Ceffer, Attila; Levendovszky, JĂĄnos (2016). "Parallel Optimization of Sparse Portfolios with AR-HMMs".
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Shah, Shalin; Dubey, Abhishek K.; Reif, John (2019-05-17). "Improved Optical Multiplexing with Temporal DNA Barcodes".
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Sofic Measures: Characterizations of Hidden Markov Chains by Linear Algebra, Formal Languages, and Symbolic Dynamics
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adjacent states). The disadvantage of such models is that dynamic-programming algorithms for training them have an
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Munkhammar, J.; Widén, J. (Oct 2018). "An N-state Markov-chain mixture distribution model of the clear-sky index".
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In the second half of the 1980s, HMMs began to be applied to the analysis of biological sequences, in particular
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Teif, V. B.; Rippe, K. (2010). "Statistical–mechanical lattice models for protein–DNA binding in chromatin".
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This task requires finding a maximum over all possible state sequences, and can be solved efficiently by the
8057: 7963: 7953: 7644: 7426: 7165: 7030: 6841: 5892:"A Maximization Technique Occurring in the Statistical Analysis of Probabilistic Functions of Markov Chains" 4214: 3866:, which allows for a single observation to be conditioned on the corresponding hidden variables of a set of 3687: 3581: 511: 7248: 5009: 8052: 7905: 7833: 7092: 6700: 6116: 5063: 4927: 4683: 3786: 3771: 3755: 3699: 3690:, with a linear relationship among related variables and where all hidden and observed variables follow a 3558: 3437: 3433: 950: 519: 6440:
IEEE Transactions on Circuits and Systems for Video Technology, vol. 22, no. 7, pp. 1076-1086, July 2012.
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Chatzis, Sotirios P.; Demiris, Yiannis (2012). "A Reservoir-Driven Non-Stationary Hidden Markov Model".
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states for each chain), and therefore, learning in such a model is difficult: for a sequence of length
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independent Markov chains, rather than a single Markov chain. It is equivalent to a single HMM, with
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If the HMMs are used for time series prediction, more sophisticated Bayesian inference methods, like
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Higgins, Cameron; Vidaurre, Diego; Kolling, Nils; Liu, Yunzhe; Behrens, Tim; Woolrich, Mark (2022).
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models, with special attention to the model assumptions and to their practical use is provided in
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complexity. In practice, approximate techniques, such as variational approaches, could be used.
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By definition of being a Markov model, an HMM has an additional requirement that the outcome of
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Blasiak, S.; Rangwala, H. (2011). "A Hidden Markov Model Variant for Sequence Classification".
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emission parameters over all hidden states. On the other hand, if the observed variable is an
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and other authors in the second half of the 1960s. One of the first applications of HMMs was
1694:{\displaystyle \operatorname {\mathbf {P} } {\bigl (}Y_{t}\in A\mid X_{t}\in B_{t}{\bigr )})} 599: 373: 247: 194: 8008: 7895: 7778: 7148: 7123: 7072: 7000: 6923: 6876: 6662: 6475: 6467: 6374: 6343: 6307: 6241: 6192: 6094: 6009: 5980: 5931: 5905: 5867: 5836: 5826: 5791: 5752: 5709: 5674: 5570: 5519: 5482: 5474: 5435: 5373: 5264: 5256: 5215: 5207: 5176: 5149: 5114: 5073: 5041:"A variational Bayesian methodology for hidden Markov models utilizing Student's-t mixtures" 4988: 4978: 4937: 4908: 4880: 4872: 4831: 4823: 4535:, not even multiple orders. Intuitively, this is because if one observes a long sequence of 3815: 3726: 3634: 3553: 3377: 2760:
on the arrows that are present in the diagram, the following state sequences are candidates:
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observer knows the composition of the urns and has just observed a sequence of three balls,
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The Master Algorithm: How the Quest for the Ultimate Learning Machine Will Remake Our World
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In its discrete form, a hidden Markov process can be visualized as a generalization of the
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Recognition of handwritten word: first and second order hidden Markov model based approach
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Diomedi, S.; Vaccari, F. E.; Galletti, C.; Hadjidimitrakis, K.; Fattori, P. (2021-10-01).
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Real-Time American Sign Language Visual Recognition From Video Using Hidden Markov Models
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likely explanation for an observation sequence) can be solved efficiently using the
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M. Bishop and E. Thompson (1986). "Maximum Likelihood Alignment of DNA Sequences".
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NICOLAI, CHRISTOPHER (2013). "SOLVING ION CHANNEL KINETICS WITH THE QuB SOFTWARE".
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The hidden part of a hidden Markov model, whose observable states is non-Markovian.
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is a good method for computing the smoothed values for all hidden state variables.
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Parallel stratified MCMC sampling of AR-HMMs for stochastic time series prediction
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Biological Sequence Analysis: Probabilistic Models of Proteins and Nucleic Acids
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Morf, H. (Feb 1998). "The stochastic two-state solar irradiance model (STSIM)".
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A variant of the previously described discriminative model is the linear-chain
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Panel Analysis: Latent Probability Models for Attitude and Behaviour Processes
6312: 6293: 6196: 5910: 5891: 5796: 5779: 5523: 5439: 5180: 5118: 1759:-th ball depends only upon a random number and the choice of the urn for the ( 6253: 6245: 6204: 6166: 6013: 5582: 5278: 4983: 7487: 6689: 6180: 6134: 5872: 5855: 5377: 4967:"Error statistics of hidden Markov model and hidden Boltzmann model results" 3623: 2778: 2350:
can be in, there is a transition probability from this state to each of the
997: 487: 483: 6674: 6480: 5590: 5531: 5496: 5409:
IJCAI Proceedings-International Joint Conference on Artificial Intelligence
5385: 5286: 5229: 5002: 4894: 4845: 6106: 3469:
associated with failing to reject the hypothesis for the output sequence.
2305:). The transition probabilities control the way the hidden state at time 5478: 3646:
Hidden Markov models were described in a series of statistical papers by
1157:
is a Markov process whose behavior is not directly observable ("hidden");
5269: 4792:
Use of hidden Markov models for partial discharge pattern classification
3456:
For some of the above problems, it may also be interesting to ask about
2755: 7314:
Generalized autoregressive conditional heteroskedasticity (GARCH) model
6754: 5919: 4876: 491: 479: 5245:"Motor-like neural dynamics in two parietal areas during arm reaching" 5211: 4483:
The curious thing is that the probability measure on the subshifts on
3825:(MEMM), which models the conditional distribution of the states using 3717:
of the model and the learnability limits are still under exploration.
2781:
problems are associated with hidden Markov models, as outlined below.
4861:"ChromHMM: automating chromatin-state discovery and characterization" 3513:
A profile HMM modelling a multiple sequence alignment of proteins in
1726:
Figure 1. Probabilistic parameters of a hidden Markov model (example)
4941: 6236: 6218:
Abraham, Kweku; Gassiat, Elisabeth; Naulet, Zacharie (March 2023).
5642: 5612: 5196:"Spatiotemporally Resolved Multivariate Pattern Analysis for M/EEG" 3785:
An extension of the previously described hidden Markov models with
6649: 6613: 4680:, a free hidden Markov model program for protein sequence analysis 4677: 3508: 1721: 44:
in which the observations are dependent on a latent (or "hidden")
6696:
Fitting HMM's with expectation-maximization – complete derivation
1775:
y1, y2 and y3 on the conveyor belt, the observer still cannot be
128:
cannot be observed directly, the goal is to learn about state of
6220:"Fundamental Limits for Learning Hidden Markov Model Parameters" 5461:
Wong, K. -C.; Chan, T. -M.; Peng, C.; Li, Y.; Zhang, Z. (2013).
3548: 3514: 2562: 2258: âˆ’ 2 and before have no influence. This is called the 6758: 5426:
Wong, W.; Stamp, M. (2006). "Hunting for metamorphic engines".
3658: 2293:). The parameters of a hidden Markov model are of two types, 459:
Estimation of the parameters in an HMM can be performed using
5973:
IEEE Transactions on Acoustics, Speech, and Signal Processing
3733:
of observations and hidden states, or equivalently both the
3709:
Nowadays, inference in hidden Markov models is performed in
2741: 2103: 1808:. The entire system is that of a hidden Markov model (HMM). 6605:
Hidden Markov processes in the context of symbolic dynamics
4772:
Modeling Form for On-line Following of Musical Performances
3460:. What is the probability that a sequence drawn from some 3277:{\displaystyle \mathrm {P} {\big (}h_{t}\ |v_{1:t}{\big )}} 2962:
where the sum runs over all possible hidden-node sequences
7294:
Autoregressive conditional heteroskedasticity (ARCH) model
6363:"Multisensor triplet Markov chains and theory of evidence" 5613:"ChromHMM: Chromatin state discovery and characterization" 4797:
IEEE Transactions on Dielectrics and Electrical Insulation
3661:. Since then, they have become ubiquitous in the field of 3053:, this problem, too, can be handled efficiently using the 2734:
emission parameters. (In such a case, unless the value of
2553:-dimensional vector distributed according to an arbitrary 3749:), is modeled. The above algorithms implicitly assume a 470:
Hidden Markov models are known for their applications to
6822:
Independent and identically distributed random variables
5039:
Chatzis, Sotirios P.; Kosmopoulos, Dimitrios I. (2011).
4761:. Master's Thesis, MIT, Feb 1995, Program in Media Arts 4674:
free server and software for protein sequence searching
2338:
The hidden state space is assumed to consist of one of
1795:
Alice believes that the weather operates as a discrete
68:). An HMM requires that there be an observable process 7299:
Autoregressive integrated moving average (ARIMA) model
4170:
Markov chain). This extension has been widely used in
4568: 4541: 4515: 4489: 4460: 4434: 4388: 4348: 4280: 4234: 4156: 4136: 4116: 4076: 4056: 4002: 3959: 3953:, a straightforward Viterbi algorithm has complexity 3939: 3919: 3892: 3872: 3465:
sequence, the statistical significance indicates the
3380: 3298: 3220: 3131: 3071: 2971: 2889: 2801: 2619: 2571: 2520: 2494: 2443: 2413: 2386: 2360: 2315: 1767:. It can be described by the upper part of Figure 1. 1621: 1538: 1504: 1477: 1413: 1390: 1360: 1165: 1136: 1083: 1056: 1029: 1005: 953: 925: 714: 706:
whose behavior is not directly observable ("hidden");
681: 628: 602: 571: 544: 429: 409: 376: 356: 323: 303: 283: 250: 230: 197: 177: 154: 134: 114: 94: 74: 54: 6731:
Hidden Markov Models: Fundamentals and Applications
2215: }). The arrows in the diagram (often called a 7921: 7726: 7688: 7597: 7511: 7468: 7435: 7327: 7284: 7194: 7111: 6867: 6792: 6559:Bartolucci, F.; Farcomeni, A.; Pennoni, F. (2013). 5856:"Growth transformations for functions on manifolds" 4562:, then one would become increasingly sure that the 3436:, where the hidden states represent the underlying 2270:) only depends on the value of the hidden variable 224:must be "influenced" exclusively by the outcome of 6179:Gassiat, E.; Cleynen, A.; Robin, S. (2016-01-01). 5309: 4614: 4554: 4527: 4501: 4472: 4446: 4420: 4374: 4334: 4266: 4162: 4142: 4122: 4102: 4062: 4038: 3988: 3945: 3925: 3905: 3878: 3796:hierarchical Dirichlet process hidden Markov model 3721:Bayesian modeling of the transitions probabilities 3713:settings, where the dependency structure enables 3423:The task, unlike the previous two, asks about the 3392: 3366: 3276: 3210:This problem can be handled efficiently using the 3199: 3110: 3038: 2951: 2865: 2726: 2601: 2541: 2506: 2464: 2425: 2399: 2372: 2327: 1693: 1607: 1520: 1490: 1455: 1399: 1376: 1341: 1149: 1115: 1077:be continuous-time stochastic processes. The pair 1069: 1042: 1011: 988: 940: 907: 694: 660: 614: 584: 557: 451: 415: 395: 362: 342: 309: 289: 269: 236: 216: 183: 163: 140: 120: 100: 80: 60: 7181:Stochastic chains with memory of variable length 6690:A Revealing Introduction to Hidden Markov Models 5463:"DNA motif elucidation using belief propagation" 3846:. This uses an undirected graphical model (aka 2262:. Similarly, the value of the observed variable 2952:{\displaystyle P(Y)=\sum _{X}P(Y\mid X)P(X),\,} 2354:possible states of the hidden variable at time 2346:possible states that a hidden variable at time 2113:A similar example is further elaborated in the 6367:International Journal of Approximate Reasoning 6770: 5818:Bulletin of the American Mathematical Society 4615:{\displaystyle Pr(A|B^{n})\to {\frac {2}{3}}} 3269: 3228: 1683: 1634: 1600: 1551: 897: 864: 838: 818: 753: 727: 8: 6436:Sotirios P. Chatzis, Dimitrios Kosmopoulos, 5890:; Petrie, T.; Soules, G.; Weiss, N. (1970). 5344:." Pattern recognition 22.3 (1989): 283-297. 4859:Ernst, Jason; Kellis, Manolis (March 2012). 3367:{\displaystyle P(x(k)\ |\ y(1),\dots ,y(t))} 3200:{\displaystyle P(x(t)\ |\ y(1),\dots ,y(t))} 3039:{\displaystyle X=x(0),x(1),\dots ,x(L-1).\,} 1428: 1414: 1232: 1205: 6032:Hidden Markov Models for Speech Recognition 5340:Kundu, Amlan, Yang He, and Paramvir Bahl. " 2866:{\displaystyle Y=y(0),y(1),\dots ,y(L-1)\,} 2746:Temporal evolution of a hidden Markov model 7309:Autoregressive–moving-average (ARMA) model 6777: 6763: 6755: 6744:Lecture on a Spreadsheet by Jason Eisner, 6603:Boyle, Mike; Petersen, Karl (2010-01-13), 6562:Latent Markov models for longitudinal data 2238:, given the values of the hidden variable 6692:by Mark Stamp, San Jose State University. 6648: 6612: 6479: 6378: 6311: 6235: 5971:(1975). "The DRAGON system—An overview". 5909: 5871: 5830: 5795: 5641: 5486: 5268: 5219: 5067: 4992: 4982: 4931: 4884: 4835: 4602: 4590: 4581: 4567: 4546: 4540: 4514: 4488: 4459: 4433: 4412: 4399: 4387: 4366: 4353: 4347: 4342:. If we "forget" the distinction between 4321: 4307: 4293: 4279: 4258: 4245: 4233: 4155: 4135: 4115: 4093: 4087: 4075: 4055: 4029: 4025: 4013: 4001: 3979: 3970: 3958: 3938: 3918: 3897: 3891: 3871: 3563:Document separation in scanning solutions 3379: 3320: 3297: 3268: 3267: 3255: 3246: 3237: 3227: 3226: 3221: 3219: 3153: 3130: 3070: 3035: 2970: 2948: 2909: 2888: 2862: 2800: 2715: 2669: 2634: 2618: 2572: 2570: 2519: 2493: 2442: 2412: 2391: 2385: 2359: 2314: 2309:is chosen given the hidden state at time 2108:Graphical representation of the given HMM 1682: 1681: 1675: 1662: 1643: 1633: 1632: 1623: 1622: 1620: 1599: 1598: 1592: 1579: 1560: 1550: 1549: 1540: 1539: 1537: 1509: 1503: 1482: 1476: 1442: 1431: 1421: 1412: 1389: 1365: 1359: 1328: 1323: 1308: 1303: 1282: 1277: 1261: 1260: 1246: 1235: 1225: 1212: 1188: 1183: 1167: 1166: 1164: 1141: 1135: 1104: 1091: 1082: 1061: 1055: 1034: 1028: 1004: 977: 958: 952: 924: 896: 895: 889: 876: 863: 862: 847: 837: 836: 827: 826: 817: 816: 810: 797: 778: 765: 752: 751: 736: 726: 725: 716: 715: 713: 686: 680: 649: 636: 627: 601: 576: 570: 549: 543: 440: 428: 408: 387: 375: 355: 334: 322: 302: 282: 261: 249: 229: 208: 196: 176: 153: 133: 113: 93: 88:whose outcomes depend on the outcomes of 73: 53: 4382:, we project this space of subshifts on 4218: 2792:The probability of observing a sequence 2754: 2433:matrix of transition probabilities is a 2138:(with the model from the above diagram, 1456:{\displaystyle \{B_{t}\}_{t\leq t_{0}}.} 467:can be used to estimate the parameters. 6719:(an exposition using basic mathematics) 6224:IEEE Transactions on Information Theory 6001:IEEE Transactions on Information Theory 4736: 2222:From the diagram, it is clear that the 7615:Doob's martingale convergence theorems 7367:Constant elasticity of variance (CEV) 7357:Chan–Karolyi–Longstaff–Sanders (CKLS) 6598: 6596: 6147:(1st ed.), Cambridge, New York: 6058:; Alex Acero; Hsiao-Wuen Hon (2001). 5897:The Annals of Mathematical Statistics 5784:The Annals of Mathematical Statistics 3810:A different type of extension uses a 3486:or the Baldi–Chauvin algorithm. The 350:must be conditionally independent of 7: 6565:. Boca Raton: Chapman and Hall/CRC. 4810:Li, N; Stephens, M (December 2003). 4790:Satish L, Gururaj BI (April 2003). " 4509:is not created by a Markov chain on 4050:four adjacent states (or in general 2514:separate parameters, for a total of 2254: âˆ’ 1); the values at time 2246:on the value of the hidden variable 2224:conditional probability distribution 989:{\displaystyle x_{1},\ldots ,x_{n},} 4428:into another space of subshifts on 3061:Probability of the latent variables 2785:Probability of an observed sequence 2602:{\displaystyle {\frac {M(M+1)}{2}}} 2219:) denote conditional dependencies. 7854:Skorokhod's representation theorem 7635:Law of large numbers (weak/strong) 5811:Baum, L. E.; Eagon, J. A. (1967). 4335:{\displaystyle \pi =(2/7,4/7,1/7)} 4150:total observations (i.e. a length- 3780:expectation-maximization algorithm 3745:of observations given states (the 3682:) or continuous (typically from a 3492:expectation-maximization algorithm 3222: 2555:multivariate Gaussian distribution 2289:) or continuous (typically from a 25: 7824:Martingale representation theorem 5854:Baum, L. E.; Sell, G. R. (1968). 3111:{\displaystyle y(1),\dots ,y(t).} 7869:Stochastic differential equation 7759:Doob's optional stopping theorem 7754:Doob–Meyer decomposition theorem 6294:"Factorial Hidden Markov Models" 6115: 5778:Baum, L. E.; Petrie, T. (1966). 5142:Expert Systems with Applications 5008: 4694:Hierarchical hidden Markov model 4181:Another recent extension is the 4039:{\displaystyle O(N^{K+1}\,K\,T)} 3530:Single-molecule kinetic analysis 1741:— state transition probabilities 1624: 1541: 1262: 1168: 828: 717: 7739:Convergence of random variables 7625:Fisher–Tippett–Gnedenko theorem 6701:A step-by-step tutorial on HMMs 5832:10.1090/S0002-9904-1967-11751-8 5261:10.1016/j.pneurobio.2021.102116 5169:Biophysical Reviews and Letters 4709:Stochastic context-free grammar 2484:possible values, governed by a 1407:and every family of Borel sets 7337:Binomial options pricing model 6667:10.1088/0953-8984/22/41/414105 6034:. Edinburgh University Press. 5860:Pacific Journal of Mathematics 4599: 4596: 4582: 4575: 4329: 4287: 4274:, with invariant distribution 4097: 4080: 4033: 4006: 3983: 3963: 3404:in the past, relative to time 3361: 3358: 3352: 3337: 3331: 3321: 3314: 3308: 3302: 3247: 3194: 3191: 3185: 3170: 3164: 3154: 3147: 3141: 3135: 3102: 3096: 3081: 3075: 3029: 3017: 3002: 2996: 2987: 2981: 2942: 2936: 2930: 2918: 2899: 2893: 2859: 2847: 2832: 2826: 2817: 2811: 2721: 2705: 2690: 2678: 2652: 2640: 2590: 2578: 2536: 2524: 2459: 2447: 2167: }). The random variable 2134:) is the hidden state at time 2090:{'Rainy': 0.57, 'Sunny': 0.43} 1718:Drawing balls from hidden urns 1688: 1515: 1336: 1270: 1254: 1176: 1110: 1084: 655: 629: 1: 7804:Kolmogorov continuity theorem 7640:Law of the iterated logarithm 6361:Pieczynski, Wojciech (2007). 6348:10.1016/S1631-073X(02)02462-7 6327:Pieczynski, Wojciech (2002). 5757:10.1016/j.solener.2018.07.056 5714:10.1016/j.solener.2018.05.055 5679:10.1016/S0038-092X(98)00004-8 4757:Thad Starner, Alex Pentland. 4421:{\displaystyle A,B_{1},B_{2}} 4267:{\displaystyle A,B_{1},B_{2}} 3864:factorial hidden Markov model 3654:, starting in the mid-1970s. 2475:In addition, for each of the 2175:) is the observation at time 1116:{\displaystyle (X_{t},Y_{t})} 661:{\displaystyle (X_{n},Y_{n})} 463:. For linear chain HMMs, the 7809:Kolmogorov extension theorem 7488:Generalized queueing network 6996:Interacting particle systems 6472:10.1016/j.patcog.2012.04.018 6329:"Chaı̂nes de Markov Triplet" 6141:; Mitchison, Graeme (1998), 6099:10.1016/0022-2836(86)90289-5 6086:Journal of Molecular Biology 6030:; M. Jack; Y. Ariki (1990). 5575:10.1021/acs.nanolett.9b00590 5428:Journal in Computer Virology 5078:10.1016/j.patcog.2010.09.001 4770:B. Pardo and W. Birmingham. 3989:{\displaystyle O(N^{2K}\,T)} 3822:maximum entropy Markov model 3778:or extended versions of the 3617:discovery (DNA and proteins) 6941:Continuous-time random walk 6336:Comptes Rendus MathĂ©matique 4828:10.1093/genetics/165.4.2213 4781:. AAAI-05 Proc., July 2005. 4720:Variable-order Markov model 4704:Sequential dynamical system 4699:Layered hidden Markov model 4375:{\displaystyle B_{1},B_{2}} 4103:{\displaystyle O(N^{K}\,T)} 3913:states (assuming there are 3862:Yet another variant is the 3610:Metamorphic virus detection 2609:parameters controlling the 2561:parameters controlling the 522:, musical score following, 8074: 7949:Extreme value theory (EVT) 7749:Doob decomposition theorem 7041:Ornstein–Uhlenbeck process 6812:Chinese restaurant process 6380:10.1016/j.ijar.2006.05.001 6149:Cambridge University Press 6060:Spoken Language Processing 5985:10.1109/TASSP.1975.1162650 5154:10.1016/j.eswa.2016.01.015 4212: 3630:Transportation forecasting 3620:DNA hybridization kinetics 3587:Alignment of bio-sequences 3413:forward-backward algorithm 3049:Applying the principle of 1471:The states of the process 343:{\displaystyle t<t_{0}} 8017: 7829:Optional stopping theorem 7630:Large deviation principle 7382:Heath–Jarrow–Morton (HJM) 7319:Moving-average (MA) model 7304:Autoregressive (AR) model 7129:Hidden Markov model (HMM) 7063:Schramm–Loewner evolution 6637:J. Phys.: Condens. Matter 6197:10.1007/s11222-014-9523-8 5524:10.1021/acssynbio.9b00010 5440:10.1007/s11416-006-0028-7 5181:10.1142/S1793048013300053 5119:10.1007/s10614-016-9579-y 3836:statistically independent 3725:Hidden Markov models are 3490:is a special case of the 2426:{\displaystyle N\times N} 277:and that the outcomes of 7744:DolĂ©ans-Dade exponential 7574:Progressively measurable 7372:Cox–Ingersoll–Ross (CIR) 6246:10.1109/TIT.2022.3213429 6185:Statistics and Computing 6014:10.1109/TIT.1975.1055384 5308:Domingos, Pedro (2015). 5249:Progress in Neurobiology 4984:10.1186/1471-2105-10-212 4689:Hidden semi-Markov model 4662:Conditional random field 3844:conditional random field 3743:conditional distribution 3739:transition probabilities 3680:categorical distribution 3499:Markov chain Monte Carlo 3458:statistical significance 3452:Statistical significance 2486:categorical distribution 2295:transition probabilities 2287:categorical distribution 1817: 941:{\displaystyle n\geq 1,} 452:{\displaystyle t=t_{0}.} 27:Statistical Markov model 7964:Mathematical statistics 7954:Large deviations theory 7784:Infinitesimal generator 7645:Maximal ergodic theorem 7564:Piecewise-deterministic 7166:Random dynamical system 7031:Markov additive process 6750:interactive spreadsheet 6544:Wiggins, L. M. (1973). 6313:10.1023/A:1007425814087 6112:(subscription required) 5911:10.1214/aoms/1177697196 5873:10.2140/pjm.1968.27.211 5797:10.1214/aoms/1177699147 5378:10.1126/science.1207598 5316:. Basic Books. p.  5107:Computational Economics 4920:Proceedings of the IEEE 4215:Subshift of finite type 3806:Discriminative approach 3765:concentration parameter 3688:linear dynamical system 3606:Sequence classification 3582:Handwriting recognition 3419:Most likely explanation 2472:transition parameters. 2226:of the hidden variable 2122:Structural architecture 2083:In this piece of code, 1736:— possible observations 615:{\displaystyle n\geq 1} 396:{\displaystyle t=t_{0}} 270:{\displaystyle t=t_{0}} 217:{\displaystyle t=t_{0}} 7799:Karhunen–LoĂšve theorem 7734:Cameron–Martin formula 7698:Burkholder–Davis–Gundy 7093:Variance gamma process 6727:(by Narada Warakagoda) 6548:. Amsterdam: Elsevier. 5467:Nucleic Acids Research 4684:Hidden Bernoulli model 4616: 4556: 4529: 4503: 4474: 4448: 4422: 4376: 4336: 4268: 4224: 4164: 4144: 4124: 4104: 4064: 4040: 3990: 3947: 3927: 3907: 3880: 3772:part-of-speech tagging 3756:Dirichlet distribution 3747:emission probabilities 3737:of hidden states (the 3700:extended Kalman filter 3559:Part-of-speech tagging 3517: 3434:part-of-speech tagging 3394: 3393:{\displaystyle k<t} 3368: 3278: 3201: 3112: 3040: 2953: 2867: 2774: 2747: 2728: 2603: 2543: 2542:{\displaystyle N(M-1)} 2508: 2466: 2465:{\displaystyle N(N-1)} 2427: 2401: 2374: 2329: 2299:emission probabilities 2242:at all times, depends 2109: 2094:transition_probability 1901:transition_probability 1747: 1746:— output probabilities 1695: 1609: 1522: 1521:{\displaystyle X_{t})} 1492: 1457: 1401: 1378: 1377:{\displaystyle t_{0},} 1343: 1151: 1117: 1071: 1044: 1013: 990: 942: 909: 696: 662: 616: 586: 559: 520:part-of-speech tagging 453: 417: 397: 364: 344: 311: 291: 271: 238: 218: 185: 165: 142: 122: 108:in a known way. Since 102: 82: 62: 7929:Actuarial mathematics 7891:Uniform integrability 7886:Stratonovich integral 7814:LĂ©vy–Prokhorov metric 7718:Marcinkiewicz–Zygmund 7605:Central limit theorem 7207:Gaussian random field 7036:McKean–Vlasov process 6956:Dyson Brownian motion 6817:Galton–Watson process 6711:(University of Leeds) 5512:ACS Synthetic Biology 4617: 4557: 4555:{\displaystyle B^{n}} 4530: 4504: 4475: 4449: 4423: 4377: 4337: 4269: 4222: 4191:triplet Markov models 4174:, in the modeling of 4165: 4145: 4125: 4105: 4065: 4041: 3991: 3948: 3928: 3908: 3906:{\displaystyle N^{K}} 3881: 3692:Gaussian distribution 3684:Gaussian distribution 3525:Computational finance 3512: 3395: 3369: 3279: 3202: 3113: 3041: 2954: 2868: 2758: 2745: 2729: 2604: 2544: 2509: 2467: 2428: 2402: 2400:{\displaystyle N^{2}} 2375: 2330: 2291:Gaussian distribution 2187:) âˆˆ {  2146:) âˆˆ {  2107: 1787:Weather guessing game 1725: 1696: 1610: 1523: 1493: 1491:{\displaystyle X_{n}} 1458: 1402: 1379: 1344: 1152: 1150:{\displaystyle X_{t}} 1118: 1072: 1070:{\displaystyle Y_{t}} 1045: 1043:{\displaystyle X_{t}} 1014: 991: 943: 910: 697: 695:{\displaystyle X_{n}} 663: 617: 587: 585:{\displaystyle Y_{n}} 560: 558:{\displaystyle X_{n}} 476:statistical mechanics 454: 418: 398: 365: 345: 312: 292: 272: 239: 219: 186: 166: 143: 123: 103: 83: 63: 8048:Hidden Markov models 8004:Time series analysis 7959:Mathematical finance 7844:Reflection principle 7171:Regenerative process 6971:Fleming–Viot process 6786:Stochastic processes 6724:Hidden Markov Models 6716:Hidden Markov Models 4965:Newberg, L. (2009). 4652:Bayesian programming 4642:Baum–Welch algorithm 4566: 4539: 4513: 4487: 4458: 4432: 4386: 4346: 4278: 4232: 4183:triplet Markov model 4154: 4134: 4130:adjacent states and 4114: 4074: 4054: 4000: 3957: 3937: 3917: 3890: 3870: 3812:discriminative model 3674:General state spaces 3597:Activity recognition 3592:Time series analysis 3488:Baum–Welch algorithm 3484:Baum–Welch algorithm 3378: 3296: 3218: 3129: 3069: 2969: 2887: 2799: 2617: 2569: 2518: 2492: 2441: 2411: 2384: 2358: 2313: 2303:output probabilities 2098:emission_probability 1979:emission_probability 1703:emission probability 1619: 1536: 1502: 1475: 1411: 1388: 1358: 1163: 1134: 1081: 1054: 1027: 1003: 951: 923: 712: 679: 626: 600: 594:stochastic processes 569: 542: 465:Baum–Welch algorithm 427: 407: 374: 354: 321: 301: 281: 248: 228: 195: 175: 152: 132: 112: 92: 72: 52: 18:Hidden Markov models 7999:Stochastic analysis 7839:Quadratic variation 7834:Prokhorov's theorem 7769:Feynman–Kac formula 7239:Markov random field 6887:Birth–death process 6659:2010JPCM...22O4105T 6464:2012PatRe..45.3985C 6452:Pattern Recognition 5749:2018SoEn..173..487M 5706:2018SoEn..170..174M 5671:1998SoEn...62..101M 5567:2019NanoL..19.2668S 5370:2011Sci...334..512S 5200:Human Brain Mapping 5060:2011PatRe..44..295C 5048:Pattern Recognition 4909:Lawrence R. Rabiner 4528:{\displaystyle A,B} 4502:{\displaystyle A,B} 4473:{\displaystyle A,B} 4447:{\displaystyle A,B} 3848:Markov random field 3827:logistic regression 3567:Machine translation 3467:false positive rate 3051:dynamic programming 2507:{\displaystyle M-1} 2373:{\displaystyle t+1} 2328:{\displaystyle t-1} 1125:hidden Markov model 670:hidden Markov model 516:gesture recognition 504:pattern recognition 34:hidden Markov model 7969:Probability theory 7849:Skorokhod integral 7819:Malliavin calculus 7402:Korn-Kreer-Lenssen 7286:Time series models 7249:Pitman–Yor process 6706:2017-08-13 at the 6399:2014-03-11 at the 6290:Jordan, Michael I. 6286:Ghahramani, Zoubin 6131:Durbin, Richard M. 5479:10.1093/nar/gkt574 5022:Sipos, I. RĂłbert. 4971:BMC Bioinformatics 4877:10.1038/nmeth.1906 4777:2012-02-06 at the 4657:Richard James Boys 4647:Bayesian inference 4612: 4552: 4525: 4499: 4470: 4444: 4418: 4372: 4332: 4264: 4225: 4187:theory of evidence 4160: 4140: 4120: 4110:running time, for 4100: 4060: 4036: 3986: 3943: 3923: 3903: 3876: 3829:(also known as a " 3735:prior distribution 3731:joint distribution 3652:speech recognition 3545:Speech recognition 3518: 3479:maximum likelihood 3390: 3364: 3274: 3197: 3108: 3036: 2949: 2914: 2863: 2775: 2748: 2724: 2599: 2539: 2504: 2462: 2423: 2397: 2370: 2325: 2110: 1748: 1707:output probability 1691: 1605: 1518: 1488: 1453: 1400:{\displaystyle A,} 1397: 1374: 1339: 1147: 1113: 1067: 1040: 1009: 986: 938: 905: 692: 658: 612: 582: 555: 524:partial discharges 500:information theory 461:maximum likelihood 449: 413: 393: 360: 340: 307: 287: 267: 234: 214: 181: 164:{\displaystyle Y.} 161: 138: 118: 98: 78: 58: 8035: 8034: 7989:Signal processing 7708:Doob's upcrossing 7703:Doob's martingale 7667:Engelbert–Schmidt 7610:Donsker's theorem 7544:Feller-continuous 7412:Rendleman–Bartter 7202:Dirichlet process 7119:Branching process 7088:Telegraph process 6981:Geometric process 6961:Empirical process 6951:Diffusion process 6807:Branching process 6802:Bernoulli process 6740:(by V. Petrushin) 6572:978-14-3981-708-7 6458:(11): 3985–3996. 6413:Lanchantin et al. 6069:978-0-13-022616-7 6062:. Prentice Hall. 6041:978-0-7486-0162-2 5364:(6055): 512–516. 5212:10.1002/hbm.25835 5206:(10): 3062–3085. 5175:(3n04): 191–211. 4911:(February 1989). 4725:Viterbi algorithm 4672:HHpred / HHsearch 4667:Estimation theory 4610: 4163:{\displaystyle T} 4143:{\displaystyle T} 4123:{\displaystyle K} 4063:{\displaystyle K} 3946:{\displaystyle T} 3926:{\displaystyle N} 3879:{\displaystyle K} 3791:Dirichlet process 3727:generative models 3572:Partial discharge 3462:null distribution 3446:Viterbi algorithm 3425:joint probability 3327: 3319: 3245: 3212:forward algorithm 3160: 3152: 3055:forward algorithm 2905: 2771:Viterbi algorithm 2697: 2659: 2613:, for a total of 2611:covariance matrix 2597: 2380:, for a total of 2115:Viterbi algorithm 2085:start_probability 2066:"clean" 2033:"Sunny" 2021:"clean" 1988:"Rainy" 1964:"Sunny" 1952:"Rainy" 1943:"Sunny" 1931:"Sunny" 1919:"Rainy" 1910:"Rainy" 1889:"Sunny" 1877:"Rainy" 1868:start_probability 1862:"clean" 1835:"Sunny" 1829:"Rainy" 1012:{\displaystyle A} 871: 861: 760: 750: 592:be discrete-time 496:signal processing 416:{\displaystyle X} 363:{\displaystyle Y} 310:{\displaystyle Y} 290:{\displaystyle X} 237:{\displaystyle X} 184:{\displaystyle Y} 141:{\displaystyle X} 121:{\displaystyle X} 101:{\displaystyle X} 81:{\displaystyle Y} 61:{\displaystyle X} 16:(Redirected from 8065: 8009:Machine learning 7896:Usual hypotheses 7779:Girsanov theorem 7764:Dynkin's formula 7529:Continuous paths 7437:Actuarial models 7377:Garman–Kohlhagen 7347:Black–Karasinski 7342:Black–Derman–Toy 7329:Financial models 7195:Fields and other 7124:Gaussian process 7073:Sigma-martingale 6877:Additive process 6779: 6772: 6765: 6756: 6686: 6652: 6618: 6617: 6616: 6600: 6591: 6583: 6577: 6576: 6556: 6550: 6549: 6541: 6535: 6532: 6526: 6523: 6517: 6514: 6508: 6505: 6499: 6492: 6486: 6485: 6483: 6447: 6441: 6434: 6428: 6422: 6416: 6410: 6404: 6391: 6385: 6384: 6382: 6358: 6352: 6351: 6333: 6324: 6318: 6317: 6315: 6306:(2/3): 245–273. 6299:Machine Learning 6282: 6276: 6273: 6267: 6264: 6258: 6257: 6239: 6230:(3): 1777–1794. 6215: 6209: 6208: 6176: 6170: 6169: 6127: 6121: 6120: 6119: 6113: 6110: 6080: 6074: 6073: 6052: 6046: 6045: 6024: 6018: 6017: 5995: 5989: 5988: 5965: 5959: 5958: 5946: 5940: 5939: 5913: 5884: 5878: 5877: 5875: 5851: 5845: 5844: 5834: 5808: 5802: 5801: 5799: 5790:(6): 1554–1563. 5775: 5769: 5768: 5732: 5726: 5725: 5689: 5683: 5682: 5654: 5648: 5647: 5645: 5633: 5627: 5626: 5624: 5623: 5609: 5603: 5602: 5561:(4): 2668–2673. 5550: 5544: 5543: 5518:(5): 1100–1111. 5507: 5501: 5500: 5490: 5458: 5452: 5451: 5423: 5417: 5416: 5404: 5398: 5397: 5351: 5345: 5338: 5332: 5331: 5315: 5305: 5299: 5298: 5272: 5240: 5234: 5233: 5223: 5191: 5185: 5184: 5164: 5158: 5157: 5137: 5131: 5130: 5102: 5096: 5095: 5093: 5092: 5086: 5080:. Archived from 5071: 5045: 5036: 5030: 5020: 5014: 5013: 5012: 5006: 4996: 4986: 4962: 4956: 4953: 4935: 4917: 4905: 4899: 4898: 4888: 4856: 4850: 4849: 4839: 4807: 4801: 4788: 4782: 4768: 4762: 4755: 4749: 4748: 4745:"Google Scholar" 4741: 4621: 4619: 4618: 4613: 4611: 4603: 4595: 4594: 4585: 4561: 4559: 4558: 4553: 4551: 4550: 4534: 4532: 4531: 4526: 4508: 4506: 4505: 4500: 4479: 4477: 4476: 4471: 4453: 4451: 4450: 4445: 4427: 4425: 4424: 4419: 4417: 4416: 4404: 4403: 4381: 4379: 4378: 4373: 4371: 4370: 4358: 4357: 4341: 4339: 4338: 4333: 4325: 4311: 4297: 4273: 4271: 4270: 4265: 4263: 4262: 4250: 4249: 4169: 4167: 4166: 4161: 4149: 4147: 4146: 4141: 4129: 4127: 4126: 4121: 4109: 4107: 4106: 4101: 4092: 4091: 4069: 4067: 4066: 4061: 4045: 4043: 4042: 4037: 4024: 4023: 3995: 3993: 3992: 3987: 3978: 3977: 3952: 3950: 3949: 3944: 3932: 3930: 3929: 3924: 3912: 3910: 3909: 3904: 3902: 3901: 3885: 3883: 3882: 3877: 3858:Other extensions 3816:generative model 3814:in place of the 3635:Solar irradiance 3554:Speech synthesis 3399: 3397: 3396: 3391: 3373: 3371: 3370: 3365: 3325: 3324: 3317: 3283: 3281: 3280: 3275: 3273: 3272: 3266: 3265: 3250: 3243: 3242: 3241: 3232: 3231: 3225: 3206: 3204: 3203: 3198: 3158: 3157: 3150: 3117: 3115: 3114: 3109: 3045: 3043: 3042: 3037: 2958: 2956: 2955: 2950: 2913: 2872: 2870: 2869: 2864: 2737: 2733: 2731: 2730: 2725: 2720: 2719: 2698: 2693: 2670: 2665: 2661: 2660: 2655: 2635: 2608: 2606: 2605: 2600: 2598: 2593: 2573: 2560: 2557:, there will be 2552: 2548: 2546: 2545: 2540: 2513: 2511: 2510: 2505: 2488:, there will be 2483: 2478: 2471: 2469: 2468: 2463: 2432: 2430: 2429: 2424: 2406: 2404: 2403: 2398: 2396: 2395: 2379: 2377: 2376: 2371: 2353: 2349: 2345: 2341: 2334: 2332: 2331: 2326: 2308: 2281: 2278:) (both at time 2241: 2237: 2178: 2137: 2099: 2095: 2091: 2086: 2079: 2076: 2073: 2070: 2067: 2064: 2061: 2058: 2055: 2054:"shop" 2052: 2049: 2046: 2043: 2042:"walk" 2040: 2037: 2034: 2031: 2028: 2025: 2022: 2019: 2016: 2013: 2010: 2009:"shop" 2007: 2004: 2001: 1998: 1997:"walk" 1995: 1992: 1989: 1986: 1983: 1980: 1977: 1974: 1971: 1968: 1965: 1962: 1959: 1956: 1953: 1950: 1947: 1944: 1941: 1938: 1935: 1932: 1929: 1926: 1923: 1920: 1917: 1914: 1911: 1908: 1905: 1902: 1899: 1896: 1893: 1890: 1887: 1884: 1881: 1878: 1875: 1872: 1869: 1866: 1863: 1860: 1857: 1856:"shop" 1854: 1851: 1850:"walk" 1848: 1845: 1842: 1839: 1836: 1833: 1830: 1827: 1824: 1821: 1700: 1698: 1697: 1692: 1687: 1686: 1680: 1679: 1667: 1666: 1648: 1647: 1638: 1637: 1628: 1627: 1614: 1612: 1611: 1606: 1604: 1603: 1597: 1596: 1584: 1583: 1565: 1564: 1555: 1554: 1545: 1544: 1527: 1525: 1524: 1519: 1514: 1513: 1497: 1495: 1494: 1489: 1487: 1486: 1462: 1460: 1459: 1454: 1449: 1448: 1447: 1446: 1426: 1425: 1406: 1404: 1403: 1398: 1384:every Borel set 1383: 1381: 1380: 1375: 1370: 1369: 1348: 1346: 1345: 1340: 1335: 1334: 1333: 1332: 1315: 1314: 1313: 1312: 1289: 1288: 1287: 1286: 1266: 1265: 1253: 1252: 1251: 1250: 1230: 1229: 1217: 1216: 1195: 1194: 1193: 1192: 1172: 1171: 1156: 1154: 1153: 1148: 1146: 1145: 1122: 1120: 1119: 1114: 1109: 1108: 1096: 1095: 1076: 1074: 1073: 1068: 1066: 1065: 1049: 1047: 1046: 1041: 1039: 1038: 1018: 1016: 1015: 1010: 995: 993: 992: 987: 982: 981: 963: 962: 947: 945: 944: 939: 914: 912: 911: 906: 901: 900: 894: 893: 881: 880: 869: 868: 867: 859: 852: 851: 842: 841: 832: 831: 822: 821: 815: 814: 802: 801: 783: 782: 770: 769: 758: 757: 756: 748: 741: 740: 731: 730: 721: 720: 701: 699: 698: 693: 691: 690: 667: 665: 664: 659: 654: 653: 641: 640: 621: 619: 618: 613: 591: 589: 588: 583: 581: 580: 564: 562: 561: 556: 554: 553: 458: 456: 455: 450: 445: 444: 422: 420: 419: 414: 402: 400: 399: 394: 392: 391: 369: 367: 366: 361: 349: 347: 346: 341: 339: 338: 316: 314: 313: 308: 296: 294: 293: 288: 276: 274: 273: 268: 266: 265: 243: 241: 240: 235: 223: 221: 220: 215: 213: 212: 190: 188: 187: 182: 170: 168: 167: 162: 147: 145: 144: 139: 127: 125: 124: 119: 107: 105: 104: 99: 87: 85: 84: 79: 67: 65: 64: 59: 48:(referred to as 21: 8073: 8072: 8068: 8067: 8066: 8064: 8063: 8062: 8038: 8037: 8036: 8031: 8013: 7974:Queueing theory 7917: 7859:Skorokhod space 7722: 7713:Kunita–Watanabe 7684: 7650:Sanov's theorem 7620:Ergodic theorem 7593: 7589:Time-reversible 7507: 7470:Queueing models 7464: 7460:Sparre–Anderson 7450:CramĂ©r–Lundberg 7431: 7417:SABR volatility 7323: 7280: 7232:Boolean network 7190: 7176:Renewal process 7107: 7056:Non-homogeneous 7046:Poisson process 6936:Contact process 6899:Brownian motion 6869:Continuous time 6863: 6857:Maximal entropy 6788: 6783: 6708:Wayback Machine 6634: 6631: 6626: 6621: 6602: 6601: 6594: 6584: 6580: 6573: 6558: 6557: 6553: 6543: 6542: 6538: 6533: 6529: 6524: 6520: 6515: 6511: 6506: 6502: 6493: 6489: 6449: 6448: 6444: 6435: 6431: 6425:Boudaren et al. 6423: 6419: 6411: 6407: 6401:Wayback Machine 6394:Boudaren et al. 6392: 6388: 6360: 6359: 6355: 6331: 6326: 6325: 6321: 6284: 6283: 6279: 6274: 6270: 6265: 6261: 6217: 6216: 6212: 6178: 6177: 6173: 6159: 6129: 6128: 6124: 6114: 6111: 6082: 6081: 6077: 6070: 6054: 6053: 6049: 6042: 6026: 6025: 6021: 5997: 5996: 5992: 5967: 5966: 5962: 5948: 5947: 5943: 5886: 5885: 5881: 5853: 5852: 5848: 5810: 5809: 5805: 5777: 5776: 5772: 5734: 5733: 5729: 5691: 5690: 5686: 5656: 5655: 5651: 5635: 5634: 5630: 5621: 5619: 5617:compbio.mit.edu 5611: 5610: 5606: 5552: 5551: 5547: 5509: 5508: 5504: 5460: 5459: 5455: 5425: 5424: 5420: 5406: 5405: 5401: 5353: 5352: 5348: 5339: 5335: 5328: 5307: 5306: 5302: 5242: 5241: 5237: 5193: 5192: 5188: 5166: 5165: 5161: 5139: 5138: 5134: 5104: 5103: 5099: 5090: 5088: 5084: 5069:10.1.1.629.6275 5043: 5038: 5037: 5033: 5021: 5017: 5007: 4964: 4963: 4959: 4942:10.1109/5.18626 4933:10.1.1.381.3454 4915: 4907: 4906: 4902: 4858: 4857: 4853: 4809: 4808: 4804: 4789: 4785: 4779:Wayback Machine 4769: 4765: 4756: 4752: 4743: 4742: 4738: 4734: 4729: 4632: 4586: 4564: 4563: 4542: 4537: 4536: 4511: 4510: 4485: 4484: 4456: 4455: 4430: 4429: 4408: 4395: 4384: 4383: 4362: 4349: 4344: 4343: 4276: 4275: 4254: 4241: 4230: 4229: 4217: 4211: 4152: 4151: 4132: 4131: 4112: 4111: 4083: 4072: 4071: 4052: 4051: 4009: 3998: 3997: 3966: 3955: 3954: 3935: 3934: 3915: 3914: 3893: 3888: 3887: 3868: 3867: 3860: 3831:maximum entropy 3808: 3760:conjugate prior 3758:, which is the 3729:, in which the 3723: 3715:identifiability 3704:particle filter 3676: 3671: 3648:Leonard E. Baum 3644: 3626:state discovery 3602:Protein folding 3577:Gene prediction 3507: 3475: 3454: 3438:parts of speech 3421: 3376: 3375: 3294: 3293: 3290: 3251: 3233: 3216: 3215: 3127: 3126: 3123: 3067: 3066: 3063: 2967: 2966: 2885: 2884: 2797: 2796: 2787: 2767: 2765: 2763: 2761: 2753: 2735: 2711: 2671: 2636: 2627: 2623: 2615: 2614: 2574: 2567: 2566: 2558: 2550: 2516: 2515: 2490: 2489: 2481: 2476: 2439: 2438: 2409: 2408: 2387: 2382: 2381: 2356: 2355: 2351: 2347: 2343: 2339: 2311: 2310: 2306: 2301:(also known as 2279: 2260:Markov property 2239: 2235: 2217:trellis diagram 2214: 2207: 2200: 2193: 2176: 2166: 2159: 2152: 2135: 2124: 2097: 2093: 2089: 2084: 2081: 2080: 2077: 2074: 2071: 2068: 2065: 2062: 2059: 2056: 2053: 2050: 2047: 2044: 2041: 2038: 2035: 2032: 2029: 2026: 2023: 2020: 2017: 2014: 2011: 2008: 2005: 2002: 1999: 1996: 1993: 1990: 1987: 1984: 1981: 1978: 1975: 1972: 1969: 1966: 1963: 1960: 1957: 1954: 1951: 1948: 1945: 1942: 1939: 1936: 1933: 1930: 1927: 1924: 1921: 1918: 1915: 1912: 1909: 1906: 1903: 1900: 1897: 1894: 1891: 1888: 1885: 1882: 1879: 1876: 1873: 1870: 1867: 1864: 1861: 1858: 1855: 1852: 1849: 1846: 1843: 1840: 1837: 1834: 1831: 1828: 1825: 1822: 1819: 1789: 1742: 1737: 1732: 1727: 1720: 1715: 1671: 1658: 1639: 1617: 1616: 1588: 1575: 1556: 1534: 1533: 1505: 1500: 1499: 1478: 1473: 1472: 1469: 1438: 1427: 1417: 1409: 1408: 1386: 1385: 1361: 1356: 1355: 1324: 1319: 1304: 1299: 1278: 1273: 1242: 1231: 1221: 1208: 1184: 1179: 1161: 1160: 1137: 1132: 1131: 1100: 1087: 1079: 1078: 1057: 1052: 1051: 1030: 1025: 1024: 1001: 1000: 973: 954: 949: 948: 921: 920: 885: 872: 843: 806: 793: 774: 761: 732: 710: 709: 682: 677: 676: 645: 632: 624: 623: 598: 597: 572: 567: 566: 545: 540: 539: 536: 436: 425: 424: 405: 404: 383: 372: 371: 352: 351: 330: 319: 318: 299: 298: 279: 278: 257: 246: 245: 226: 225: 204: 193: 192: 173: 172: 150: 149: 130: 129: 110: 109: 90: 89: 70: 69: 50: 49: 28: 23: 22: 15: 12: 11: 5: 8071: 8069: 8061: 8060: 8058:Bioinformatics 8055: 8050: 8040: 8039: 8033: 8032: 8030: 8029: 8024: 8022:List of topics 8018: 8015: 8014: 8012: 8011: 8006: 8001: 7996: 7991: 7986: 7981: 7979:Renewal theory 7976: 7971: 7966: 7961: 7956: 7951: 7946: 7944:Ergodic theory 7941: 7936: 7934:Control theory 7931: 7925: 7923: 7919: 7918: 7916: 7915: 7914: 7913: 7908: 7898: 7893: 7888: 7883: 7878: 7877: 7876: 7866: 7864:Snell envelope 7861: 7856: 7851: 7846: 7841: 7836: 7831: 7826: 7821: 7816: 7811: 7806: 7801: 7796: 7791: 7786: 7781: 7776: 7771: 7766: 7761: 7756: 7751: 7746: 7741: 7736: 7730: 7728: 7724: 7723: 7721: 7720: 7715: 7710: 7705: 7700: 7694: 7692: 7686: 7685: 7683: 7682: 7663:Borel–Cantelli 7652: 7647: 7642: 7637: 7632: 7627: 7622: 7617: 7612: 7607: 7601: 7599: 7598:Limit theorems 7595: 7594: 7592: 7591: 7586: 7581: 7576: 7571: 7566: 7561: 7556: 7551: 7546: 7541: 7536: 7531: 7526: 7521: 7515: 7513: 7509: 7508: 7506: 7505: 7500: 7495: 7490: 7485: 7480: 7474: 7472: 7466: 7465: 7463: 7462: 7457: 7452: 7447: 7441: 7439: 7433: 7432: 7430: 7429: 7424: 7419: 7414: 7409: 7404: 7399: 7394: 7389: 7384: 7379: 7374: 7369: 7364: 7359: 7354: 7349: 7344: 7339: 7333: 7331: 7325: 7324: 7322: 7321: 7316: 7311: 7306: 7301: 7296: 7290: 7288: 7282: 7281: 7279: 7278: 7273: 7268: 7267: 7266: 7261: 7251: 7246: 7241: 7236: 7235: 7234: 7229: 7219: 7217:Hopfield model 7214: 7209: 7204: 7198: 7196: 7192: 7191: 7189: 7188: 7183: 7178: 7173: 7168: 7163: 7162: 7161: 7156: 7151: 7146: 7136: 7134:Markov process 7131: 7126: 7121: 7115: 7113: 7109: 7108: 7106: 7105: 7103:Wiener sausage 7100: 7098:Wiener process 7095: 7090: 7085: 7080: 7078:Stable process 7075: 7070: 7068:Semimartingale 7065: 7060: 7059: 7058: 7053: 7043: 7038: 7033: 7028: 7023: 7018: 7013: 7011:Jump diffusion 7008: 7003: 6998: 6993: 6988: 6986:Hawkes process 6983: 6978: 6973: 6968: 6966:Feller process 6963: 6958: 6953: 6948: 6943: 6938: 6933: 6931:Cauchy process 6928: 6927: 6926: 6921: 6916: 6911: 6906: 6896: 6895: 6894: 6884: 6882:Bessel process 6879: 6873: 6871: 6865: 6864: 6862: 6861: 6860: 6859: 6854: 6849: 6844: 6834: 6829: 6824: 6819: 6814: 6809: 6804: 6798: 6796: 6790: 6789: 6784: 6782: 6781: 6774: 6767: 6759: 6753: 6752: 6742: 6729: 6721: 6713: 6698: 6693: 6687: 6643:(41): 414105. 6630: 6627: 6625: 6624:External links 6622: 6620: 6619: 6592: 6578: 6571: 6551: 6536: 6527: 6518: 6509: 6500: 6487: 6442: 6429: 6417: 6405: 6386: 6353: 6342:(3): 275–278. 6319: 6277: 6268: 6259: 6210: 6171: 6157: 6122: 6093:(2): 159–165. 6075: 6068: 6047: 6040: 6019: 5990: 5960: 5941: 5904:(1): 164–171. 5879: 5866:(2): 211–227. 5846: 5803: 5770: 5727: 5684: 5665:(2): 101–112. 5649: 5628: 5604: 5545: 5502: 5453: 5434:(3): 211–229. 5418: 5399: 5346: 5333: 5326: 5300: 5235: 5186: 5159: 5132: 5113:(4): 563–578. 5097: 5054:(2): 295–306. 5031: 5015: 4957: 4926:(2): 257–286. 4900: 4871:(3): 215–216. 4865:Nature Methods 4851: 4822:(4): 2213–33. 4802: 4783: 4763: 4750: 4735: 4733: 4730: 4728: 4727: 4722: 4717: 4711: 4706: 4701: 4696: 4691: 4686: 4681: 4675: 4669: 4664: 4659: 4654: 4649: 4644: 4639: 4633: 4631: 4628: 4609: 4606: 4601: 4598: 4593: 4589: 4584: 4580: 4577: 4574: 4571: 4549: 4545: 4524: 4521: 4518: 4498: 4495: 4492: 4469: 4466: 4463: 4443: 4440: 4437: 4415: 4411: 4407: 4402: 4398: 4394: 4391: 4369: 4365: 4361: 4356: 4352: 4331: 4328: 4324: 4320: 4317: 4314: 4310: 4306: 4303: 4300: 4296: 4292: 4289: 4286: 4283: 4261: 4257: 4253: 4248: 4244: 4240: 4237: 4210: 4209:Measure theory 4207: 4172:bioinformatics 4159: 4139: 4119: 4099: 4096: 4090: 4086: 4082: 4079: 4059: 4035: 4032: 4028: 4022: 4019: 4016: 4012: 4008: 4005: 3985: 3982: 3976: 3973: 3969: 3965: 3962: 3942: 3922: 3900: 3896: 3875: 3859: 3856: 3807: 3804: 3789:priors uses a 3776:Gibbs sampling 3722: 3719: 3675: 3672: 3670: 3667: 3663:bioinformatics 3643: 3640: 3639: 3638: 3632: 3627: 3621: 3618: 3615:Sequence motif 3612: 3607: 3604: 3599: 3594: 3589: 3584: 3579: 3574: 3569: 3564: 3561: 3556: 3551: 3542: 3537: 3532: 3527: 3506: 3503: 3474: 3471: 3453: 3450: 3420: 3417: 3389: 3386: 3383: 3363: 3360: 3357: 3354: 3351: 3348: 3345: 3342: 3339: 3336: 3333: 3330: 3323: 3316: 3313: 3310: 3307: 3304: 3301: 3289: 3286: 3271: 3264: 3261: 3258: 3254: 3249: 3240: 3236: 3230: 3224: 3196: 3193: 3190: 3187: 3184: 3181: 3178: 3175: 3172: 3169: 3166: 3163: 3156: 3149: 3146: 3143: 3140: 3137: 3134: 3122: 3119: 3107: 3104: 3101: 3098: 3095: 3092: 3089: 3086: 3083: 3080: 3077: 3074: 3062: 3059: 3047: 3046: 3034: 3031: 3028: 3025: 3022: 3019: 3016: 3013: 3010: 3007: 3004: 3001: 2998: 2995: 2992: 2989: 2986: 2983: 2980: 2977: 2974: 2960: 2959: 2947: 2944: 2941: 2938: 2935: 2932: 2929: 2926: 2923: 2920: 2917: 2912: 2908: 2904: 2901: 2898: 2895: 2892: 2874: 2873: 2861: 2858: 2855: 2852: 2849: 2846: 2843: 2840: 2837: 2834: 2831: 2828: 2825: 2822: 2819: 2816: 2813: 2810: 2807: 2804: 2786: 2783: 2752: 2749: 2723: 2718: 2714: 2710: 2707: 2704: 2701: 2696: 2692: 2689: 2686: 2683: 2680: 2677: 2674: 2668: 2664: 2658: 2654: 2651: 2648: 2645: 2642: 2639: 2633: 2630: 2626: 2622: 2596: 2592: 2589: 2586: 2583: 2580: 2577: 2538: 2535: 2532: 2529: 2526: 2523: 2503: 2500: 2497: 2480:discrete with 2461: 2458: 2455: 2452: 2449: 2446: 2422: 2419: 2416: 2394: 2390: 2369: 2366: 2363: 2324: 2321: 2318: 2212: 2205: 2198: 2191: 2164: 2157: 2150: 2123: 2120: 1818: 1788: 1785: 1765:Markov process 1719: 1716: 1714: 1711: 1690: 1685: 1678: 1674: 1670: 1665: 1661: 1657: 1654: 1651: 1646: 1642: 1636: 1631: 1626: 1602: 1595: 1591: 1587: 1582: 1578: 1574: 1571: 1568: 1563: 1559: 1553: 1548: 1543: 1517: 1512: 1508: 1485: 1481: 1468: 1465: 1464: 1463: 1452: 1445: 1441: 1437: 1434: 1430: 1424: 1420: 1416: 1396: 1393: 1373: 1368: 1364: 1351: 1350: 1338: 1331: 1327: 1322: 1318: 1311: 1307: 1302: 1298: 1295: 1292: 1285: 1281: 1276: 1272: 1269: 1264: 1259: 1256: 1249: 1245: 1241: 1238: 1234: 1228: 1224: 1220: 1215: 1211: 1207: 1204: 1201: 1198: 1191: 1187: 1182: 1178: 1175: 1170: 1158: 1144: 1140: 1112: 1107: 1103: 1099: 1094: 1090: 1086: 1064: 1060: 1037: 1033: 1021: 1020: 1008: 985: 980: 976: 972: 969: 966: 961: 957: 937: 934: 931: 928: 916: 915: 904: 899: 892: 888: 884: 879: 875: 866: 858: 855: 850: 846: 840: 835: 830: 825: 820: 813: 809: 805: 800: 796: 792: 789: 786: 781: 777: 773: 768: 764: 755: 747: 744: 739: 735: 729: 724: 719: 707: 704:Markov process 689: 685: 657: 652: 648: 644: 639: 635: 631: 611: 608: 605: 579: 575: 552: 548: 535: 532: 528:bioinformatics 472:thermodynamics 448: 443: 439: 435: 432: 412: 390: 386: 382: 379: 359: 337: 333: 329: 326: 306: 286: 264: 260: 256: 253: 233: 211: 207: 203: 200: 180: 160: 157: 137: 117: 97: 77: 57: 46:Markov process 26: 24: 14: 13: 10: 9: 6: 4: 3: 2: 8070: 8059: 8056: 8054: 8053:Markov models 8051: 8049: 8046: 8045: 8043: 8028: 8025: 8023: 8020: 8019: 8016: 8010: 8007: 8005: 8002: 8000: 7997: 7995: 7992: 7990: 7987: 7985: 7982: 7980: 7977: 7975: 7972: 7970: 7967: 7965: 7962: 7960: 7957: 7955: 7952: 7950: 7947: 7945: 7942: 7940: 7937: 7935: 7932: 7930: 7927: 7926: 7924: 7920: 7912: 7909: 7907: 7904: 7903: 7902: 7899: 7897: 7894: 7892: 7889: 7887: 7884: 7882: 7881:Stopping time 7879: 7875: 7872: 7871: 7870: 7867: 7865: 7862: 7860: 7857: 7855: 7852: 7850: 7847: 7845: 7842: 7840: 7837: 7835: 7832: 7830: 7827: 7825: 7822: 7820: 7817: 7815: 7812: 7810: 7807: 7805: 7802: 7800: 7797: 7795: 7792: 7790: 7787: 7785: 7782: 7780: 7777: 7775: 7772: 7770: 7767: 7765: 7762: 7760: 7757: 7755: 7752: 7750: 7747: 7745: 7742: 7740: 7737: 7735: 7732: 7731: 7729: 7725: 7719: 7716: 7714: 7711: 7709: 7706: 7704: 7701: 7699: 7696: 7695: 7693: 7691: 7687: 7680: 7676: 7672: 7671:Hewitt–Savage 7668: 7664: 7660: 7656: 7655:Zero–one laws 7653: 7651: 7648: 7646: 7643: 7641: 7638: 7636: 7633: 7631: 7628: 7626: 7623: 7621: 7618: 7616: 7613: 7611: 7608: 7606: 7603: 7602: 7600: 7596: 7590: 7587: 7585: 7582: 7580: 7577: 7575: 7572: 7570: 7567: 7565: 7562: 7560: 7557: 7555: 7552: 7550: 7547: 7545: 7542: 7540: 7537: 7535: 7532: 7530: 7527: 7525: 7522: 7520: 7517: 7516: 7514: 7510: 7504: 7501: 7499: 7496: 7494: 7491: 7489: 7486: 7484: 7481: 7479: 7476: 7475: 7473: 7471: 7467: 7461: 7458: 7456: 7453: 7451: 7448: 7446: 7443: 7442: 7440: 7438: 7434: 7428: 7425: 7423: 7420: 7418: 7415: 7413: 7410: 7408: 7405: 7403: 7400: 7398: 7395: 7393: 7390: 7388: 7385: 7383: 7380: 7378: 7375: 7373: 7370: 7368: 7365: 7363: 7360: 7358: 7355: 7353: 7352:Black–Scholes 7350: 7348: 7345: 7343: 7340: 7338: 7335: 7334: 7332: 7330: 7326: 7320: 7317: 7315: 7312: 7310: 7307: 7305: 7302: 7300: 7297: 7295: 7292: 7291: 7289: 7287: 7283: 7277: 7274: 7272: 7269: 7265: 7262: 7260: 7257: 7256: 7255: 7254:Point process 7252: 7250: 7247: 7245: 7242: 7240: 7237: 7233: 7230: 7228: 7225: 7224: 7223: 7220: 7218: 7215: 7213: 7212:Gibbs measure 7210: 7208: 7205: 7203: 7200: 7199: 7197: 7193: 7187: 7184: 7182: 7179: 7177: 7174: 7172: 7169: 7167: 7164: 7160: 7157: 7155: 7152: 7150: 7147: 7145: 7142: 7141: 7140: 7137: 7135: 7132: 7130: 7127: 7125: 7122: 7120: 7117: 7116: 7114: 7110: 7104: 7101: 7099: 7096: 7094: 7091: 7089: 7086: 7084: 7081: 7079: 7076: 7074: 7071: 7069: 7066: 7064: 7061: 7057: 7054: 7052: 7049: 7048: 7047: 7044: 7042: 7039: 7037: 7034: 7032: 7029: 7027: 7024: 7022: 7019: 7017: 7014: 7012: 7009: 7007: 7004: 7002: 7001:ItĂŽ diffusion 6999: 6997: 6994: 6992: 6989: 6987: 6984: 6982: 6979: 6977: 6976:Gamma process 6974: 6972: 6969: 6967: 6964: 6962: 6959: 6957: 6954: 6952: 6949: 6947: 6944: 6942: 6939: 6937: 6934: 6932: 6929: 6925: 6922: 6920: 6917: 6915: 6912: 6910: 6907: 6905: 6902: 6901: 6900: 6897: 6893: 6890: 6889: 6888: 6885: 6883: 6880: 6878: 6875: 6874: 6872: 6870: 6866: 6858: 6855: 6853: 6850: 6848: 6847:Self-avoiding 6845: 6843: 6840: 6839: 6838: 6835: 6833: 6832:Moran process 6830: 6828: 6825: 6823: 6820: 6818: 6815: 6813: 6810: 6808: 6805: 6803: 6800: 6799: 6797: 6795: 6794:Discrete time 6791: 6787: 6780: 6775: 6773: 6768: 6766: 6761: 6760: 6757: 6751: 6747: 6743: 6741: 6738: 6734: 6730: 6728: 6725: 6722: 6720: 6717: 6714: 6712: 6709: 6705: 6702: 6699: 6697: 6694: 6691: 6688: 6684: 6680: 6676: 6672: 6668: 6664: 6660: 6656: 6651: 6646: 6642: 6638: 6633: 6632: 6628: 6623: 6615: 6610: 6606: 6599: 6597: 6593: 6589: 6588: 6582: 6579: 6574: 6568: 6564: 6563: 6555: 6552: 6547: 6540: 6537: 6531: 6528: 6522: 6519: 6513: 6510: 6504: 6501: 6497: 6491: 6488: 6482: 6481:10044/1/12611 6477: 6473: 6469: 6465: 6461: 6457: 6453: 6446: 6443: 6439: 6433: 6430: 6426: 6421: 6418: 6414: 6409: 6406: 6402: 6398: 6395: 6390: 6387: 6381: 6376: 6372: 6368: 6364: 6357: 6354: 6349: 6345: 6341: 6337: 6330: 6323: 6320: 6314: 6309: 6305: 6301: 6300: 6295: 6291: 6287: 6281: 6278: 6272: 6269: 6263: 6260: 6255: 6251: 6247: 6243: 6238: 6233: 6229: 6225: 6221: 6214: 6211: 6206: 6202: 6198: 6194: 6190: 6186: 6182: 6175: 6172: 6168: 6164: 6160: 6158:0-521-62971-3 6154: 6150: 6146: 6145: 6140: 6139:Krogh, Anders 6136: 6135:Eddy, Sean R. 6132: 6126: 6123: 6118: 6108: 6104: 6100: 6096: 6092: 6088: 6087: 6079: 6076: 6071: 6065: 6061: 6057: 6056:Xuedong Huang 6051: 6048: 6043: 6037: 6033: 6029: 6028:Xuedong Huang 6023: 6020: 6015: 6011: 6007: 6003: 6002: 5994: 5991: 5986: 5982: 5978: 5974: 5970: 5964: 5961: 5956: 5952: 5945: 5942: 5937: 5933: 5929: 5925: 5921: 5917: 5912: 5907: 5903: 5899: 5898: 5893: 5889: 5883: 5880: 5874: 5869: 5865: 5861: 5857: 5850: 5847: 5842: 5838: 5833: 5828: 5824: 5820: 5819: 5814: 5807: 5804: 5798: 5793: 5789: 5785: 5781: 5774: 5771: 5766: 5762: 5758: 5754: 5750: 5746: 5742: 5738: 5731: 5728: 5723: 5719: 5715: 5711: 5707: 5703: 5699: 5695: 5688: 5685: 5680: 5676: 5672: 5668: 5664: 5660: 5653: 5650: 5644: 5639: 5632: 5629: 5618: 5614: 5608: 5605: 5600: 5596: 5592: 5588: 5584: 5580: 5576: 5572: 5568: 5564: 5560: 5556: 5549: 5546: 5541: 5537: 5533: 5529: 5525: 5521: 5517: 5513: 5506: 5503: 5498: 5494: 5489: 5484: 5480: 5476: 5472: 5468: 5464: 5457: 5454: 5449: 5445: 5441: 5437: 5433: 5429: 5422: 5419: 5414: 5410: 5403: 5400: 5395: 5391: 5387: 5383: 5379: 5375: 5371: 5367: 5363: 5359: 5358: 5350: 5347: 5343: 5337: 5334: 5329: 5327:9780465061921 5323: 5319: 5314: 5313: 5304: 5301: 5296: 5292: 5288: 5284: 5280: 5276: 5271: 5266: 5262: 5258: 5254: 5250: 5246: 5239: 5236: 5231: 5227: 5222: 5217: 5213: 5209: 5205: 5201: 5197: 5190: 5187: 5182: 5178: 5174: 5170: 5163: 5160: 5155: 5151: 5147: 5143: 5136: 5133: 5128: 5124: 5120: 5116: 5112: 5108: 5101: 5098: 5087:on 2011-04-01 5083: 5079: 5075: 5070: 5065: 5061: 5057: 5053: 5049: 5042: 5035: 5032: 5029: 5025: 5019: 5016: 5011: 5004: 5000: 4995: 4990: 4985: 4980: 4976: 4972: 4968: 4961: 4958: 4955: 4951: 4947: 4943: 4939: 4934: 4929: 4925: 4921: 4914: 4910: 4904: 4901: 4896: 4892: 4887: 4882: 4878: 4874: 4870: 4866: 4862: 4855: 4852: 4847: 4843: 4838: 4833: 4829: 4825: 4821: 4817: 4813: 4806: 4803: 4799: 4798: 4793: 4787: 4784: 4780: 4776: 4773: 4767: 4764: 4760: 4754: 4751: 4746: 4740: 4737: 4731: 4726: 4723: 4721: 4718: 4715: 4712: 4710: 4707: 4705: 4702: 4700: 4697: 4695: 4692: 4690: 4687: 4685: 4682: 4679: 4676: 4673: 4670: 4668: 4665: 4663: 4660: 4658: 4655: 4653: 4650: 4648: 4645: 4643: 4640: 4638: 4637:Andrey Markov 4635: 4634: 4629: 4627: 4623: 4607: 4604: 4591: 4587: 4578: 4572: 4569: 4547: 4543: 4522: 4519: 4516: 4496: 4493: 4490: 4481: 4467: 4464: 4461: 4441: 4438: 4435: 4413: 4409: 4405: 4400: 4396: 4392: 4389: 4367: 4363: 4359: 4354: 4350: 4326: 4322: 4318: 4315: 4312: 4308: 4304: 4301: 4298: 4294: 4290: 4284: 4281: 4259: 4255: 4251: 4246: 4242: 4238: 4235: 4221: 4216: 4208: 4206: 4202: 4198: 4194: 4192: 4188: 4184: 4179: 4177: 4176:DNA sequences 4173: 4157: 4137: 4117: 4094: 4088: 4084: 4077: 4057: 4047: 4030: 4026: 4020: 4017: 4014: 4010: 4003: 3980: 3974: 3971: 3967: 3960: 3940: 3920: 3898: 3894: 3873: 3865: 3857: 3855: 3853: 3849: 3845: 3840: 3837: 3832: 3828: 3824: 3823: 3817: 3813: 3805: 3803: 3801: 3797: 3792: 3788: 3783: 3781: 3777: 3773: 3770: 3766: 3761: 3757: 3752: 3748: 3744: 3740: 3736: 3732: 3728: 3720: 3718: 3716: 3712: 3711:nonparametric 3707: 3705: 3701: 3697: 3696:Kalman filter 3693: 3689: 3685: 3681: 3673: 3668: 3666: 3664: 3660: 3655: 3653: 3649: 3641: 3636: 3633: 3631: 3628: 3625: 3622: 3619: 3616: 3613: 3611: 3608: 3605: 3603: 3600: 3598: 3595: 3593: 3590: 3588: 3585: 3583: 3580: 3578: 3575: 3573: 3570: 3568: 3565: 3562: 3560: 3557: 3555: 3552: 3550: 3546: 3543: 3541: 3540:Cryptanalysis 3538: 3536: 3533: 3531: 3528: 3526: 3523: 3522: 3521: 3516: 3511: 3504: 3502: 3500: 3495: 3493: 3489: 3485: 3480: 3472: 3470: 3468: 3463: 3459: 3451: 3449: 3447: 3442: 3439: 3435: 3430: 3426: 3418: 3416: 3414: 3409: 3407: 3403: 3387: 3384: 3381: 3355: 3349: 3346: 3343: 3340: 3334: 3328: 3311: 3305: 3299: 3287: 3285: 3262: 3259: 3256: 3252: 3238: 3234: 3213: 3208: 3188: 3182: 3179: 3176: 3173: 3167: 3161: 3144: 3138: 3132: 3120: 3118: 3105: 3099: 3093: 3090: 3087: 3084: 3078: 3072: 3060: 3058: 3056: 3052: 3032: 3026: 3023: 3020: 3014: 3011: 3008: 3005: 2999: 2993: 2990: 2984: 2978: 2975: 2972: 2965: 2964: 2963: 2945: 2939: 2933: 2927: 2924: 2921: 2915: 2910: 2906: 2902: 2896: 2890: 2883: 2882: 2881: 2879: 2856: 2853: 2850: 2844: 2841: 2838: 2835: 2829: 2823: 2820: 2814: 2808: 2805: 2802: 2795: 2794: 2793: 2790: 2784: 2782: 2780: 2772: 2757: 2750: 2744: 2740: 2716: 2712: 2708: 2702: 2699: 2694: 2687: 2684: 2681: 2675: 2672: 2666: 2662: 2656: 2649: 2646: 2643: 2637: 2631: 2628: 2624: 2620: 2612: 2594: 2587: 2584: 2581: 2575: 2564: 2556: 2533: 2530: 2527: 2521: 2501: 2498: 2495: 2487: 2473: 2456: 2453: 2450: 2444: 2436: 2435:Markov matrix 2420: 2417: 2414: 2392: 2388: 2367: 2364: 2361: 2336: 2322: 2319: 2316: 2304: 2300: 2296: 2292: 2288: 2283: 2277: 2273: 2269: 2265: 2261: 2257: 2253: 2249: 2245: 2233: 2229: 2225: 2220: 2218: 2211: 2204: 2197: 2190: 2186: 2182: 2174: 2170: 2163: 2156: 2149: 2145: 2141: 2133: 2129: 2121: 2119: 2118: 2116: 2106: 2102: 1816: 1814: 1809: 1807: 1802: 1798: 1793: 1786: 1784: 1782: 1778: 1774: 1768: 1766: 1762: 1758: 1753: 1745: 1740: 1735: 1730: 1724: 1717: 1712: 1710: 1708: 1704: 1676: 1672: 1668: 1663: 1659: 1655: 1652: 1649: 1644: 1640: 1629: 1593: 1589: 1585: 1580: 1576: 1572: 1569: 1566: 1561: 1557: 1546: 1531: 1530:hidden states 1510: 1506: 1483: 1479: 1466: 1450: 1443: 1439: 1435: 1432: 1422: 1418: 1394: 1391: 1371: 1366: 1362: 1353: 1352: 1329: 1325: 1320: 1316: 1309: 1305: 1300: 1296: 1293: 1290: 1283: 1279: 1274: 1267: 1257: 1247: 1243: 1239: 1236: 1226: 1222: 1218: 1213: 1209: 1202: 1199: 1196: 1189: 1185: 1180: 1173: 1159: 1142: 1138: 1130: 1129: 1128: 1126: 1105: 1101: 1097: 1092: 1088: 1062: 1058: 1035: 1031: 1006: 999: 983: 978: 974: 970: 967: 964: 959: 955: 935: 932: 929: 926: 918: 917: 902: 890: 886: 882: 877: 873: 856: 853: 848: 844: 833: 823: 811: 807: 803: 798: 794: 790: 787: 784: 779: 775: 771: 766: 762: 745: 742: 737: 733: 722: 708: 705: 687: 683: 675: 674: 673: 671: 650: 646: 642: 637: 633: 609: 606: 603: 595: 577: 573: 550: 546: 533: 531: 529: 525: 521: 517: 513: 509: 505: 501: 497: 493: 489: 485: 481: 477: 473: 468: 466: 462: 446: 441: 437: 433: 430: 410: 388: 384: 380: 377: 357: 335: 331: 327: 324: 304: 284: 262: 258: 254: 251: 231: 209: 205: 201: 198: 178: 158: 155: 148:by observing 135: 115: 95: 75: 55: 47: 43: 39: 35: 30: 19: 7939:Econometrics 7901:Wiener space 7789:ItĂŽ integral 7690:Inequalities 7579:Self-similar 7549:Gauss–Markov 7539:Exchangeable 7519:CĂ dlĂ g paths 7455:Risk process 7407:LIBOR market 7276:Random graph 7271:Random field 7128: 7083:Superprocess 7021:LĂ©vy process 7016:Jump process 6991:Hunt process 6827:Markov chain 6739: 6726: 6718: 6710: 6640: 6636: 6604: 6585: 6581: 6561: 6554: 6545: 6539: 6530: 6521: 6512: 6503: 6495: 6490: 6455: 6451: 6445: 6432: 6420: 6408: 6389: 6370: 6366: 6356: 6339: 6335: 6322: 6303: 6297: 6280: 6271: 6262: 6227: 6223: 6213: 6191:(1): 61–71. 6188: 6184: 6174: 6143: 6125: 6090: 6084: 6078: 6059: 6050: 6031: 6022: 6005: 5999: 5993: 5976: 5972: 5963: 5954: 5951:Inequalities 5950: 5944: 5901: 5895: 5882: 5863: 5859: 5849: 5822: 5816: 5806: 5787: 5783: 5773: 5740: 5737:Solar Energy 5736: 5730: 5697: 5694:Solar Energy 5693: 5687: 5662: 5659:Solar Energy 5658: 5652: 5631: 5620:. Retrieved 5616: 5607: 5558: 5555:Nano Letters 5554: 5548: 5515: 5511: 5505: 5473:(16): e153. 5470: 5466: 5456: 5431: 5427: 5421: 5412: 5408: 5402: 5361: 5355: 5349: 5336: 5311: 5303: 5270:11585/834094 5252: 5248: 5238: 5203: 5199: 5189: 5172: 5168: 5162: 5145: 5141: 5135: 5110: 5106: 5100: 5089:. Retrieved 5082:the original 5051: 5047: 5034: 5023: 5018: 4974: 4970: 4960: 4923: 4919: 4903: 4868: 4864: 4854: 4819: 4815: 4805: 4795: 4786: 4766: 4753: 4739: 4624: 4482: 4226: 4203: 4199: 4195: 4190: 4186: 4182: 4180: 4048: 3863: 3861: 3851: 3841: 3820: 3809: 3799: 3795: 3784: 3769:unsupervised 3764: 3746: 3738: 3724: 3708: 3677: 3656: 3645: 3637:variability 3547:, including 3535:Neuroscience 3519: 3505:Applications 3496: 3476: 3455: 3443: 3428: 3422: 3410: 3405: 3401: 3291: 3209: 3124: 3064: 3048: 2961: 2880:is given by 2877: 2875: 2791: 2788: 2776: 2474: 2337: 2302: 2298: 2294: 2284: 2275: 2271: 2267: 2263: 2255: 2251: 2247: 2243: 2231: 2227: 2221: 2209: 2202: 2195: 2188: 2184: 2180: 2172: 2168: 2161: 2154: 2147: 2143: 2139: 2131: 2127: 2125: 2112: 2111: 2082: 1841:observations 1810: 1806:observations 1805: 1800: 1797:Markov chain 1794: 1790: 1780: 1776: 1772: 1769: 1760: 1756: 1749: 1743: 1738: 1733: 1728: 1706: 1702: 1529: 1470: 1124: 1022: 669: 537: 469: 42:Markov model 37: 33: 31: 29: 7984:Ruin theory 7922:Disciplines 7794:ItĂŽ's lemma 7569:Predictable 7244:Percolation 7227:Potts model 7222:Ising model 7186:White noise 7144:Differences 7006:ItĂŽ process 6946:Cox process 6842:Loop-erased 6837:Random walk 5888:Baum, L. E. 5743:: 487–495. 5700:: 174–183. 4714:Time Series 2766:3 1 2 5 3 2 2764:4 3 2 5 3 2 2762:5 3 2 5 3 2 1779:which urn ( 1752:urn problem 1528:are called 1467:Terminology 622:. 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Index

Hidden Markov models
Markov model
Markov process
maximum likelihood
Baum–Welch algorithm
thermodynamics
statistical mechanics
physics
chemistry
economics
finance
signal processing
information theory
pattern recognition
speech
handwriting
gesture recognition
part-of-speech tagging
partial discharges
bioinformatics
stochastic processes
Markov process
Borel set

urn problem
Markov process
Markov chain
Python
Graphical representation of the given HMM
Viterbi algorithm

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