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Gene-for-gene relationship

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of the tomato Pto/Prf/AvrPto interaction showed that the Avirulence protein, AvrPto, interacted directly with Pto despite Pto not having an LRR. This makes Pto the guardee protein, which is protected by the NBS-LRR protein Prf. However, Pto is a resistance gene alone, which is an argument against the
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AvrPto is a small triple-helix protein that, like several other effectors, is targeted to the plasma membrane by N-myristoylation. AvrPto is an inhibitor of PRR kinase domains. PRRs signal plants to induce immunity when PAMPs are detected. The ability to target receptor kinases is required for the
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In only some cases is there direct interaction between the R gene product and the Avr gene product. For example, both FLS2 and XA21 interact with the microbial peptides. In contrast, for the NBS-LRR class of R genes, direct interaction has not been shown for most of the R/avr pairs. This lack of
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There is no common structure between avirulence gene products. Because there would be no evolutionary advantage to a pathogen keeping a protein that only serves to have it recognised by the plant, it is believed that the products of Avr genes play an important role in
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The term "avirulence gene" remains useful as a broad term that indicates a gene that encodes any determinant of the specificity of the interaction with the host. Thus, this term can encompass some conserved microbial signatures, also called
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ratios rather than genetics ratios in host-parasite systems. In doing so, he discovered the differential interaction that is common to all gene-for-gene relationships and that is now known as the Person differential interaction.
474:. The guardee protein is RIN4, which is hyperphosphorylated by the Avr proteins. Another high profile study that supports the guard hypothesis shows that the RPS5 pair uses PBS1, a protein kinase as a guardee against AvrPphB. 413:
strains, whereas Pto R gene is only found in a few wild tomato species. This suggests recent evolution of the Pto R gene and the pressure to evolve to target AvrPto, turning a virulence effector to an avirulence effector.
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proposes that the R proteins interact, or guard, a protein known as the guardee which is the target of the Avr protein. When it detects interference with the guardee protein, it activates resistance.
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virulence function of AvrPto in plants. However, Pto is a resistant gene that can detect AvrPto and induce immunity as well. AvrPto is an ancient effector that is conserved in many
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LRRs are involved in protein-protein interactions, and the greatest variation amongst resistance genes occurs in the LRR domain. LRR swapping experiments between resistance genes in
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The PRR class of R genes includes the rice XA21 resistance gene that recognizes the ax21 peptide and the Arabidopsis FLS2 peptide that recognizes the flg22 peptide from flagellin.
362:(PAMPs or MAMPs), and pathogen effectors (e.g. bacterial type III effectors and oomycete effectors) as well as any genes that control variation in the activity of those molecules. 113:). Flor showed that the inheritance of both resistance in the host and parasite ability to cause disease is controlled by pairs of matching genes. One is a plant gene called the 54: 417:
Unlike the MAMP or PAMP class of avr genes that are recognized by the host PRRs, the targets of bacterial effector avr proteins appear to be proteins involved in plant
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tomato resistance gene (Pto) belongs to a class of its own. It encodes a Ser/Thr kinase but has no LRR. It requires the presence of a linked NBS-LRR gene,
973:"Xa21D encodes a receptor-like molecule with a leucine-rich repeat domain that determines race-specific recognition and is subject to adaptive evolution" 819:
Lee SW, Han SW, Sririyanum M, Park CJ, Seo YS, Ronald PC (November 2009). "A type I-secreted, sulfated peptide triggers XA21-mediated innate immunity".
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Xin XF, He SY (2013). "Pseudomonas syringae pv. tomato DC3000: a model pathogen for probing disease susceptibility and hormone signaling in plants".
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Intracellular recognition of an avirulence gene product was first demonstrated by Gopalan et al 1996. They found that artificial expression of
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Shao F, Golstein C, Ade J, Stoutemyer M, Dixon JE, Innes RW (August 2003). "Cleavage of Arabidopsis PBS1 by a bacterial type III effector".
1159:"The solution structure of type III effector protein AvrPto reveals conformational and dynamic features important for plant pathogenesis" 1433:
Grzeskowiak L, Stephan W, Rose LE (October 2014). "Epistatic selection and coadaptation in the Prf resistance complex of wild tomato".
185:(LRR). The protein products of the PRRs contain extracellular, juxtamembrane, transmembrane and intracellular non-RD kinase domains. 72: 1030:"Isolation of genes expressed during compatible interactions between leaf rust (Puccinia triticina) and wheat using cDNA-AFLP" 93:
that plants and their diseases each have single genes that interact with each other during an infection. It was proposed by
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Whitham SA, Qi M, Innes RW, Ma W, Lopes-Caitar V, Hewezi T (August 2016). "Molecular Soybean-Pathogen Interactions".
125:) gene. Plants producing a specific R gene product are resistant towards a pathogen that produces the corresponding 1127: 366: 1347:
Van der Biezen EA, Jones JD (December 1998). "Plant disease-resistance proteins and the gene-for-gene concept".
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of Avr genes in animal pathogens have been shown to do this. For example, the AvrBs3 family of proteins possess
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One subclass has an amino-terminal Toll/Interleukin 1 receptor homology region (TIR). This includes the
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There are other classes of R genes, such as the extracellular LRR class of R genes; examples include
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Deslandes L, Rivas S (November 2012). "Catch me if you can: bacterial effectors and plant targets".
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Flor HH (1955). "Host-parasite interaction in flax rust - its genetics and other implications".
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and acidic activation domains and are believed to function by altering host cell transcription.
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Lahaye T, Bonas U (October 2001). "Molecular secrets of bacterial type III effector proteins".
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R gene specificity (recognising certain Avr gene products) is believed to be conferred by the
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When a gene in a host directly protects against a gene in a pathogen, forming a 1-to-1 system
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gene product. Gene-for-gene relationships are a widespread and very important aspect of
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Pruitt RN, Schwessinger B, Joe A, Thomas N, Liu F, Albert M, et al. (July 2015).
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resulted in the specificity of the resistance gene for the avirulence gene changing.
751: 1419: 867: 856: 252: 1290: 735: 712:"A receptor kinase-like protein encoded by the rice disease resistance gene, Xa21" 710:
Song WY, Wang GL, Chen LL, Kim HS, Pi LY, Holsten T, et al. (December 1995).
1446: 783: 394:. This proved recognition was occurring intracellularly and not on the surface. 286: 261: 238: 152: 767:"Plant and animal pathogen recognition receptors signal through non-RD kinases" 711: 1254: 1237: 1175: 1158: 449: 282: 220: 178: 971:
Wang GL, Ruan DL, Song WY, Sideris S, Chen L, Pi LY, et al. (May 1998).
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Xiang T, Zong N, Zou Y, Wu Y, Zhang J, Xing W, et al. (January 2008).
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There are several different classes of R genes. The major classes are the
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rich repeats. LRRs are multiple, serial repeats of a motif of roughly 24
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products encoded by this class of resistance gene are located within the
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is able to respond to two completely unrelated avirulence factors from
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residues at regular intervals. Some may also contain regularly spaced
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evidence for a direct interaction led to the formation of the guard
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Wulf J, Pascuzzi PE, Fahmy A, Martin GB, Nicholson LK (July 2004).
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Several experiments support this hypothesis, e.g. the Rpm1 gene in
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Flor HH (1971). "Current status of the gene-for-gene concept".
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produced cell death when combined with expression of the host
29: 1071:"Plant NBS-LRR proteins in pathogen sensing and host defense" 177:(PRR). The protein products of the NBS-LRR R genes contain a 626:(1959). "Gene-for-gene relationships in parasitic systems". 207:
The other subclass does not contain a TIR and instead has a
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Flor HH (1947). "Inheritance of reaction to rust in flax".
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Within the NBS-LRR class of R genes are two subclasses:
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may be too technical for most readers to understand
1231: 1229: 514:Flor HH (1942). "Inheritance of pathogenicity in 360:pathogen or microbe associated molecular patterns 1028:Zhang L, Meakin H, Dickinson M (November 2003). 656:McHale L, Tan X, Koehl P, Michelmore RW (2006). 705: 703: 651: 649: 8: 899:|...|intentional=yes}} 658:"Plant NBS-LRR proteins: adaptable guards" 1454: 1253: 1174: 1094: 1045: 1004: 947: 792: 782: 683: 673: 600: 598: 73:Learn how and when to remove this message 57:, without removing the technical details. 496:Gene-for-gene interactions in rust fungi 506: 151:was the first scientist to study plant 1069:DeYoung BJ, Innes RW (December 2006). 316:but there are some, most notably the 55:make it understandable to non-experts 7: 765:Dardick C, Ronald P (January 2006). 610:Host Management in Crop Pathosystems 1212:10.1146/annurev-phyto-082712-102321 1136:10.1146/annurev-phyto-080615-100156 589:10.1146/annurev.py.09.090171.001423 341:protects barley against nearly all 133:. Another example can be seen with 452:for the NBS-LRR class of R genes. 402:in genetically susceptible hosts. 285:in length, with leucines or other 25: 1435:Infection, Genetics and Evolution 1047:10.1046/j.1364-3703.2003.00192.x 34: 1200:Annual Review of Phytopathology 1120:Annual Review of Phytopathology 612:. Macmillan Publishing Company. 273:Specificity of resistance genes 250:that confer resistance against 1349:Trends in Biochemical Sciences 868:10.1126/science.342.6155.191-a 236:Xa21D for resistance against 1: 1361:10.1016/S0968-0004(98)01311-5 1326:10.1016/S1360-1385(01)02083-0 1291:10.1016/j.tplants.2012.06.011 736:10.1126/science.270.5243.1804 211:region at its amino terminal. 175:pattern recognition receptors 1447:10.1016/j.meegid.2014.06.019 784:10.1371/journal.ppat.0020002 431:nuclear localisation signals 330:resistance is conferred by 97:who was working with rust ( 1505: 435: 312:Most resistance genes are 308:Recessive resistance genes 165:Classes of resistance gene 87:gene-for-gene relationship 1255:10.1016/j.cub.2007.12.020 1176:10.1016/j.str.2004.04.017 1034:Molecular Plant Pathology 181:binding site (NBS) and a 478:Yeast two-hybrid studies 438:Avirulence on Ve1 (Ave1) 131:plant disease resistance 1404:10.1126/science.1085671 1314:Trends in Plant Science 1279:Trends in Plant Science 841:10.1126/science.1173438 675:10.1186/gb-2006-7-4-212 940:10.1126/sciadv.1500245 891:|...}} 862:(Retracted, see 491:Horizontal resistance 173:and the cell surface 577:Annu Rev Phytopathol 471:Pseudomonas syringae 465:Arabidopsis thaliana 368:Pseudomonas syringae 202:tobacco mosaic virus 149:Clayton Oscar Person 1396:2003Sci...301.1230S 1390:(5637): 1230–1233. 932:2015SciA....1E0245P 833:2009Sci...326..850L 728:1995Sci...270.1804S 722:(5243): 1804–1806. 253:Cladosporium fulvum 196:resistance gene of 183:leucine rich repeat 110:Linum usitatissimum 481:guard hypothesis. 314:autosomal dominant 1081:(12): 1243–1249. 1075:Nature Immunology 827:(5954): 850–853. 429:binding domains, 95:Harold Henry Flor 83: 82: 75: 16:(Redirected from 1496: 1469: 1468: 1458: 1430: 1424: 1423: 1379: 1373: 1372: 1344: 1338: 1337: 1309: 1303: 1302: 1274: 1268: 1267: 1257: 1233: 1224: 1223: 1195: 1189: 1188: 1178: 1169:(7): 1257–1268. 1154: 1148: 1147: 1115: 1109: 1108: 1098: 1066: 1060: 1059: 1049: 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Index

Gene-for-gene
help improve it
make it understandable to non-experts
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plant pathology
Harold Henry Flor
Melampsora lini
flax
Linum usitatissimum
resistance (R) gene
plant disease resistance
Lactuca serriola
Bremia lactucae
Clayton Oscar Person
pathosystem
NBS-LRR genes
pattern recognition receptors
nucleotide
leucine rich repeat
tobacco
tobacco mosaic virus
leucine zipper
protein
plant cell
cytoplasm
rice
Xanthomonas
tomato
Cladosporium fulvum
Pseudomonas

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