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Pseudonocardiaceae

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42: 65: 292:, another member of Frankiales. Additionally, five conserved signature proteins have been identified which are found only in the orders Pseudonocardiales and Corynebacteriales. Homologs of the proteins are generally found in 277:
are closely related. Several conserved signature indels have been identified which are found in both Pseudonocardiales and Corynebacteriales, including a three-amino-acid insertion in a conserved region of
1906: 1689: 718: 1880: 1919: 1854: 1893: 300:, providing additional evidence of these two species being closely related to the orders Pseudonocardiales and Corynebacteriales. 1955: 1712:
Nouioui I, Carro L, García-López M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Göker M (2018).
64: 1898: 41: 1983: 279: 254: 250: 1924: 288: 241: 1806: 407: 1768: 50: 1450: 497: 1374: 597: 671: 1960: 1934: 1828: 587: 1283: 1082: 681: 617: 487: 1629:"Phylogenetic Framework and Molecular Signatures for the Main Clades of the Phylum Actinobacteria" 808: 691: 647: 637: 447: 977: 657: 143: 59: 1058: 701: 273:
is closely related to this group. Some evidence also suggests the orders Pseudonocardiales and
1942: 1815: 1749: 1658: 1193: 887: 846: 758: 607: 517: 347: 317: 274: 236: 224: 1885: 1573:
Embley MT, Smida J, Stackebrandt E (1988). "The phylogeny of mycolate-less wall chemotype IV
1947: 1739: 1729: 1648: 1640: 1612:
ord. nov.". In Goodfellow M, Kämpfer P, Trujillo ME, Suzuki K, Ludwig W, Whitman WB (eds.).
1590: 1234: 377: 337: 1457: 1300: 1217: 1034: 870: 477: 467: 457: 367: 357: 220: 1744: 1713: 1653: 1628: 775: 577: 266: 86: 1594: 1977: 1333: 1099: 960: 557: 507: 417: 397: 387: 327: 96: 261:
and all but one of the Pseudonocardiaceae species. This one-amino-acid insertion in
1911: 1820: 1680: 17: 1867: 1800: 1357: 627: 567: 1791: 437: 262: 1734: 1841: 929: 527: 427: 1753: 1662: 1644: 235:
The species within the family Pseudonocardiaceae form a distinct clade in
1785: 537: 249:, also formed a clade with the Pseudonocardiaceae species in 100% of the 76: 1010: 547: 246: 1872: 1859: 1762: 1846: 1766: 1616:. Vol. 5 (2nd ed.). New York: Springer. p. 1301. 1833: 721:(LPSN). The phylogeny is based on whole-genome analysis. 1690:
List of Prokaryotic names with Standing in Nomenclature
719:
List of Prokaryotic names with Standing in Nomenclature
239:
based on concatenated protein sequences. Additionally,
269:
for nearly all of the Pseudonocardiaceae and suggests
1714:"Genome-Based Taxonomic Classification of the Phylum 1775: 717:The currently accepted taxonomy is based on the 612:Lacey and Goodfellow 1975 (Approved Lists 1980) 1608:Labeda DP, Goodfellow M (2012). "Order XIII. 602:Nonomura and Ohara 1971 (Approved Lists 1980) 8: 1553:are not included in this phylogenetic tree. 372:Gochnauer et al. 1975 (Approved Lists 1980) 1763: 1633:Microbiology and Molecular Biology Reviews 1614:Bergey's Manual of Systematic Bacteriology 392:Hasegawa et al. 1978 (Approved Lists 1980) 253:replications of the phylogenetic trees. A 40: 31: 1743: 1733: 1652: 1565: 1487: 1674: 1672: 666:Tomita et al. 1978) Tomita et al. 1987 257:has been identified which is found in 219:are a family of bacteria in the order 7: 1935:4af443d7-4708-4069-9c3f-e789fb62261c 282:. This insertion is also present in 223:and the only member of the suborder 1349: 1325: 1275: 1268: 1209: 1185: 1178: 1074: 1050: 1026: 1002: 952: 945: 921: 862: 838: 831: 824: 800: 750: 743: 731: 724: 582:Henssen 1957 (Approved Lists 1980) 25: 311:comprises the following genera: 63: 1627:Gao, B.; Gupta, R. S. (2012). 245:, currently part of the order 1: 1595:10.1016/S0723-2020(88)80047-X 706:Labeda and Kroppenstedt 2007 402:Labeda and Kroppenstedt 2008 188:Labeda and Kroppenstedt 2000 159:Goodfellow and Trujillo 2015 632:Moshtaghi Nikou et al. 2017 2000: 280:UDP-galactopyranose mutase 111:Labeda and Goodfellow 2015 1454: 1371: 1354: 1347: 1330: 1323: 1297: 1280: 1273: 1266: 1231: 1214: 1207: 1190: 1183: 1176: 1096: 1079: 1072: 1055: 1048: 1031: 1024: 1007: 1000: 974: 957: 950: 943: 926: 919: 884: 867: 860: 843: 836: 829: 822: 805: 798: 772: 755: 748: 741: 729: 686:Korn-Wendisch et al. 1995 289:Geodermatophilus obscurus 265:serves to both provide a 255:conserved signature indel 149: 142: 135: 130: 60:Scientific classification 58: 48: 39: 34: 1735:10.3389/fmicb.2018.02007 532:Stackebrandt et al. 1994 242:Nakamurella multipartite 204:Stackebrandt et al. 1997 572:Kim and Goodfellow 1999 422:Lechevalier et al. 1986 1679:Euzéby JP, Parte AC. 1645:10.1128/MMBR.05011-11 1583:Syst. Appl. Microbiol 1523:Halosaccharopolyspora 498:Halosaccharopolyspora 408:Allosaccharopolyspora 362:Indananda et al. 2010 165:Pseudonocardiaceae: 1577:and description of 522:Shearer et al. 1986 452:Ningsih et al. 2019 185:Actinosynnemataceae 177:Actinopolysporineae 169:Actinopolysporaceae 152:Pseudonocardiales: 51:Pseudonocardia pini 35:Pseudonocardiaceae 1912:pseudonocardiaceae 1807:Pseudonocardiaceae 1777:Pseudonocardiaceae 1683:Pseudonocardiaceae 1579:Pseudonocardiaceae 978:Streptoalloteichus 658:Streptoalloteichus 622:Labeda et al. 1984 552:Yassin et al. 1995 462:Labeda et al. 2008 432:Meklat et al. 2015 382:Quadri et al. 2016 332:Hatano et al. 2016 322:Tamura et al. 2000 309:Pseudonocardiaceae 237:phylogenetic trees 217:Pseudonocardiaceae 156:Actinopolysporales 125:Embley et al. 1989 121:Pseudonocardiaceae 27:Family of bacteria 1984:Pseudonocardiales 1971: 1970: 1943:Open Tree of Life 1769:Taxon identifiers 1610:Pseudonocardiales 1478: 1477: 1469: 1468: 1440: 1439: 1431: 1430: 1422: 1421: 1413: 1412: 1404: 1403: 1395: 1394: 1386: 1385: 1375:Saccharomonospora 1312: 1311: 1255: 1254: 1246: 1245: 1194:Kibdelosporangium 1165: 1164: 1156: 1155: 1147: 1146: 1138: 1137: 1129: 1128: 1120: 1119: 1111: 1110: 989: 988: 908: 907: 899: 898: 888:Saccharopolyspora 847:Actinoalloteichus 787: 786: 759:Actinomycetospora 737:Pseudonocardiales 707: 697: 687: 677: 667: 653: 643: 633: 623: 613: 608:Saccharopolyspora 603: 598:Saccharomonospora 593: 583: 573: 563: 553: 543: 533: 523: 518:Kibdelosporangium 513: 512:Zhang et al. 2016 503: 493: 483: 473: 463: 453: 443: 433: 423: 413: 403: 393: 383: 373: 363: 353: 352:Jiang et al. 2008 348:Actinomycetospora 343: 333: 323: 318:Actinoalloteichus 275:Corynebacteriales 225:Pseudonocardineae 213: 212: 205: 201:Pseudonocardineae 197: 196:Saker et al. 2015 189: 181: 173: 160: 126: 112: 107:Pseudonocardiales 18:Pseudonocardineae 16:(Redirected from 1991: 1964: 1963: 1951: 1950: 1938: 1937: 1928: 1927: 1915: 1914: 1902: 1901: 1889: 1888: 1876: 1875: 1863: 1862: 1850: 1849: 1837: 1836: 1824: 1823: 1811: 1810: 1809: 1796: 1795: 1794: 1764: 1758: 1757: 1747: 1737: 1722:Front. Microbiol 1709: 1703: 1702: 1700: 1698: 1676: 1667: 1666: 1656: 1624: 1618: 1617: 1605: 1599: 1598: 1570: 1554: 1547:Tamaricihabitans 1499:Actinorectispora 1492: 1350: 1326: 1276: 1269: 1235:Actinokineospora 1210: 1186: 1179: 1075: 1051: 1027: 1003: 953: 946: 922: 863: 839: 832: 825: 801: 751: 744: 732: 725: 705: 695: 685: 675: 672:Tamaricihabitans 661: 651: 642:Tian et al. 2009 641: 631: 621: 611: 601: 592:Tian et al. 2022 591: 581: 571: 561: 551: 541: 531: 521: 511: 501: 491: 482:Tang et al. 2010 481: 471: 461: 451: 441: 431: 421: 411: 401: 391: 381: 378:Actinorectispora 371: 361: 351: 341: 338:Actinokineospora 331: 321: 267:molecular marker 203: 195: 187: 179: 171: 158: 124: 110: 68: 67: 44: 32: 21: 1999: 1998: 1994: 1993: 1992: 1990: 1989: 1988: 1974: 1973: 1972: 1967: 1959: 1954: 1946: 1941: 1933: 1931: 1923: 1918: 1910: 1905: 1897: 1892: 1884: 1879: 1871: 1866: 1858: 1853: 1845: 1840: 1832: 1827: 1819: 1814: 1805: 1804: 1799: 1790: 1789: 1784: 1771: 1761: 1711: 1710: 1706: 1696: 1694: 1678: 1677: 1670: 1626: 1625: 1621: 1607: 1606: 1602: 1572: 1571: 1567: 1563: 1558: 1557: 1515:Haloactinomyces 1493: 1489: 1484: 1479: 1470: 1458:Mycobacteriales 1441: 1432: 1423: 1414: 1405: 1396: 1387: 1313: 1301:Haloechinothrix 1256: 1247: 1218:Actinophytocola 1166: 1157: 1148: 1139: 1130: 1121: 1112: 1035:Goodfellowiella 990: 909: 900: 871:Actinopolyspora 788: 715: 710: 676:Qin et al. 2015 652:Jin et al. 2022 588:Qaidamihabitans 562:Xia et al. 2013 502:Teo et al. 2021 492:Lai et al. 2014 478:Haloechinothrix 472:Lai et al. 2017 468:Haloactinomyces 458:Goodfellowiella 412:Teo et al. 2021 368:Actinopolyspora 358:Actinophytocola 306: 294:N. multipartite 284:N. multipartite 271:N. multipartite 259:N. multipartite 233: 221:Actinomycetales 193:Mzabimycetaceae 180:Zhi et al. 2009 172:Zhi et al. 2009 123: 109: 62: 28: 23: 22: 15: 12: 11: 5: 1997: 1995: 1987: 1986: 1976: 1975: 1969: 1968: 1966: 1965: 1952: 1939: 1929: 1916: 1903: 1890: 1877: 1864: 1851: 1838: 1825: 1812: 1797: 1781: 1779: 1773: 1772: 1767: 1760: 1759: 1716:Actinobacteria 1704: 1668: 1619: 1600: 1564: 1562: 1559: 1556: 1555: 1486: 1485: 1483: 1480: 1476: 1475: 1472: 1471: 1467: 1466: 1463: 1462: 1453: 1447: 1446: 1443: 1442: 1438: 1437: 1434: 1433: 1429: 1428: 1425: 1424: 1420: 1419: 1416: 1415: 1411: 1410: 1407: 1406: 1402: 1401: 1398: 1397: 1393: 1392: 1389: 1388: 1384: 1383: 1380: 1379: 1370: 1367: 1366: 1363: 1362: 1353: 1348: 1346: 1343: 1342: 1339: 1338: 1329: 1324: 1322: 1319: 1318: 1315: 1314: 1310: 1309: 1306: 1305: 1296: 1293: 1292: 1289: 1288: 1279: 1274: 1272: 1267: 1265: 1262: 1261: 1258: 1257: 1253: 1252: 1249: 1248: 1244: 1243: 1240: 1239: 1230: 1227: 1226: 1223: 1222: 1213: 1208: 1206: 1203: 1202: 1199: 1198: 1189: 1184: 1182: 1177: 1175: 1172: 1171: 1168: 1167: 1163: 1162: 1159: 1158: 1154: 1153: 1150: 1149: 1145: 1144: 1141: 1140: 1136: 1135: 1132: 1131: 1127: 1126: 1123: 1122: 1118: 1117: 1114: 1113: 1109: 1108: 1105: 1104: 1095: 1092: 1091: 1088: 1087: 1078: 1073: 1071: 1068: 1067: 1064: 1063: 1054: 1049: 1047: 1044: 1043: 1040: 1039: 1030: 1025: 1023: 1020: 1019: 1016: 1015: 1006: 1001: 999: 996: 995: 992: 991: 987: 986: 983: 982: 973: 970: 969: 966: 965: 956: 951: 949: 944: 942: 939: 938: 935: 934: 925: 920: 918: 915: 914: 911: 910: 906: 905: 902: 901: 897: 896: 893: 892: 883: 880: 879: 876: 875: 866: 861: 859: 856: 855: 852: 851: 842: 837: 835: 830: 828: 823: 821: 818: 817: 814: 813: 804: 799: 797: 794: 793: 790: 789: 785: 784: 781: 780: 776:Pseudonocardia 771: 768: 767: 764: 763: 754: 749: 747: 742: 740: 730: 728: 723: 714: 711: 709: 708: 698: 696:Wu et al. 2014 688: 678: 668: 654: 644: 634: 624: 614: 604: 594: 584: 578:Pseudonocardia 574: 564: 554: 544: 534: 524: 514: 504: 494: 484: 474: 464: 454: 444: 434: 424: 414: 404: 394: 384: 374: 364: 354: 344: 334: 324: 313: 305: 302: 232: 229: 211: 210: 209: 208: 207: 206: 198: 190: 182: 174: 163: 162: 161: 147: 146: 140: 139: 133: 132: 128: 127: 118: 114: 113: 104: 100: 99: 94: 90: 89: 87:Actinomycetota 84: 80: 79: 74: 70: 69: 56: 55: 54:on agar plate 46: 45: 37: 36: 26: 24: 14: 13: 10: 9: 6: 4: 3: 2: 1996: 1985: 1982: 1981: 1979: 1962: 1957: 1953: 1949: 1944: 1940: 1936: 1930: 1926: 1921: 1917: 1913: 1908: 1904: 1900: 1895: 1891: 1887: 1882: 1878: 1874: 1869: 1865: 1861: 1856: 1852: 1848: 1843: 1839: 1835: 1830: 1826: 1822: 1817: 1813: 1808: 1802: 1798: 1793: 1787: 1783: 1782: 1780: 1778: 1774: 1770: 1765: 1755: 1751: 1746: 1741: 1736: 1731: 1727: 1723: 1719: 1717: 1708: 1705: 1693: 1691: 1686: 1684: 1675: 1673: 1669: 1664: 1660: 1655: 1650: 1646: 1642: 1639:(1): 66–112. 1638: 1634: 1630: 1623: 1620: 1615: 1611: 1604: 1601: 1596: 1592: 1588: 1584: 1580: 1576: 1575:Actinomycetes 1569: 1566: 1560: 1552: 1548: 1544: 1540: 1536: 1535:Longimycelium 1532: 1528: 1527:Herbihabitans 1524: 1520: 1519:Halopolyspora 1516: 1512: 1508: 1504: 1500: 1496: 1495:Actinocrispum 1491: 1488: 1481: 1474: 1473: 1465: 1464: 1461: 1460: 1459: 1452: 1449: 1448: 1445: 1444: 1436: 1435: 1427: 1426: 1418: 1417: 1409: 1408: 1400: 1399: 1391: 1390: 1382: 1381: 1378: 1377: 1376: 1369: 1368: 1365: 1364: 1361: 1360: 1359: 1352: 1351: 1345: 1344: 1341: 1340: 1337: 1336: 1335: 1334:Amycolatopsis 1328: 1327: 1321: 1320: 1317: 1316: 1308: 1307: 1304: 1303: 1302: 1295: 1294: 1291: 1290: 1287: 1286: 1285: 1284:Thermocrispum 1278: 1277: 1271: 1270: 1264: 1263: 1260: 1259: 1251: 1250: 1242: 1241: 1238: 1237: 1236: 1229: 1228: 1225: 1224: 1221: 1220: 1219: 1212: 1211: 1205: 1204: 1201: 1200: 1197: 1196: 1195: 1188: 1187: 1181: 1180: 1174: 1173: 1170: 1169: 1161: 1160: 1152: 1151: 1143: 1142: 1134: 1133: 1125: 1124: 1116: 1115: 1107: 1106: 1103: 1102: 1101: 1100:Actinosynnema 1094: 1093: 1090: 1089: 1086: 1085: 1084: 1083:Saccharothrix 1077: 1076: 1070: 1069: 1066: 1065: 1062: 1061: 1060: 1053: 1052: 1046: 1045: 1042: 1041: 1038: 1037: 1036: 1029: 1028: 1022: 1021: 1018: 1017: 1014: 1013: 1012: 1005: 1004: 998: 997: 994: 993: 985: 984: 981: 980: 979: 972: 971: 968: 967: 964: 963: 962: 961:Allokutzneria 955: 954: 948: 947: 941: 940: 937: 936: 933: 932: 931: 924: 923: 917: 916: 913: 912: 904: 903: 895: 894: 891: 890: 889: 882: 881: 878: 877: 874: 873: 872: 865: 864: 858: 857: 854: 853: 850: 849: 848: 841: 840: 834: 833: 827: 826: 820: 819: 816: 815: 812: 811: 810: 803: 802: 796: 795: 792: 791: 783: 782: 779: 778: 777: 770: 769: 766: 765: 762: 761: 760: 753: 752: 746: 745: 739: 738: 734: 733: 727: 726: 722: 720: 712: 704: 703: 699: 694: 693: 689: 684: 683: 682:Thermocrispum 679: 674: 673: 669: 665: 660: 659: 655: 650: 649: 645: 640: 639: 635: 630: 629: 625: 620: 619: 618:Saccharothrix 615: 610: 609: 605: 600: 599: 595: 590: 589: 585: 580: 579: 575: 570: 569: 565: 560: 559: 558:Longimycelium 555: 550: 549: 545: 540: 539: 535: 530: 529: 525: 520: 519: 515: 510: 509: 508:Herbihabitans 505: 500: 499: 495: 490: 489: 488:Halopolyspora 485: 480: 479: 475: 470: 469: 465: 460: 459: 455: 450: 449: 445: 440: 439: 435: 430: 429: 425: 420: 419: 418:Amycolatopsis 415: 410: 409: 405: 400: 399: 398:Allokutzneria 395: 390: 389: 388:Actinosynnema 385: 380: 379: 375: 370: 369: 365: 360: 359: 355: 350: 349: 345: 342:Hasegawa 1988 340: 339: 335: 330: 329: 328:Actinocrispum 325: 320: 319: 315: 314: 312: 310: 303: 301: 299: 295: 291: 290: 285: 281: 276: 272: 268: 264: 260: 256: 252: 248: 244: 243: 238: 230: 228: 226: 222: 218: 202: 199: 194: 191: 186: 183: 178: 175: 170: 167: 166: 164: 157: 154: 153: 151: 150: 148: 145: 141: 138: 134: 129: 122: 119: 116: 115: 108: 105: 102: 101: 98: 97:Actinomycetia 95: 92: 91: 88: 85: 82: 81: 78: 75: 72: 71: 66: 61: 57: 53: 52: 47: 43: 38: 33: 30: 19: 1776: 1725: 1721: 1715: 1707: 1695:. Retrieved 1688: 1682: 1636: 1632: 1622: 1613: 1609: 1603: 1586: 1582: 1578: 1574: 1568: 1551:Thermotunica 1550: 1546: 1543:Solihabitans 1542: 1538: 1534: 1530: 1526: 1522: 1518: 1514: 1511:Gandjariella 1510: 1506: 1502: 1498: 1494: 1490: 1456: 1455: 1373: 1372: 1356: 1355: 1332: 1331: 1299: 1298: 1282: 1281: 1233: 1232: 1216: 1215: 1192: 1191: 1098: 1097: 1081: 1080: 1057: 1056: 1033: 1032: 1009: 1008: 976: 975: 959: 958: 928: 927: 886: 885: 869: 868: 845: 844: 809:Sciscionella 807: 806: 774: 773: 757: 756: 736: 735: 716: 700: 692:Thermotunica 690: 680: 670: 663: 656: 648:Solihabitans 646: 638:Sciscionella 636: 626: 616: 606: 596: 586: 576: 566: 556: 546: 536: 526: 516: 506: 496: 486: 476: 466: 456: 448:Gandjariella 446: 436: 426: 416: 406: 396: 386: 376: 366: 356: 346: 336: 326: 316: 308: 307: 297: 293: 287: 283: 270: 258: 240: 234: 216: 214: 200: 192: 184: 176: 168: 155: 136: 120: 106: 49: 29: 1868:iNaturalist 1801:Wikispecies 1581:fam. nov". 1539:Salinifilum 1358:Prauserella 628:Salinifilum 568:Prauserella 442:Labeda 2001 298:G. obscurus 1561:References 1507:Crossiella 438:Crossiella 263:UMP kinase 247:Frankiales 137:See text. 1589:: 16–19. 1503:Bounagaea 1059:Umezawaea 930:Kutzneria 713:Phylogeny 702:Umezawaea 528:Kutzneria 428:Bounagaea 251:bootstrap 1978:Category 1792:Q7255180 1786:Wikidata 1754:30186281 1728:: 2007. 1663:22390973 1531:Labedaea 1451:outgroup 542:Lee 2012 538:Labedaea 231:Genomics 144:Synonyms 117:Family: 83:Phylum: 77:Bacteria 73:Domain: 1745:6113628 1697:June 9, 1654:3294427 1011:Lentzea 548:Lentzea 131:Genera 103:Order: 93:Class: 1961:394436 1948:126141 1932:NZOR: 1899:956501 1886:105655 1873:356578 1847:1PNOCF 1752:  1742:  1692:(LPSN) 1661:  1651:  1549:, and 304:Genera 1956:WoRMS 1881:IRMNG 1482:Notes 1925:2070 1920:NCBI 1907:LPSN 1894:ITIS 1860:3841 1855:GBIF 1842:EPPO 1834:7884 1750:PMID 1699:2021 1659:PMID 296:and 286:and 215:The 1829:EoL 1821:F9N 1816:CoL 1740:PMC 1730:doi 1649:PMC 1641:doi 1591:doi 1980:: 1958:: 1945:: 1922:: 1909:: 1896:: 1883:: 1870:: 1857:: 1844:: 1831:: 1818:: 1803:: 1788:: 1748:. 1738:. 1724:. 1720:. 1687:. 1671:^ 1657:. 1647:. 1637:76 1635:. 1631:. 1587:11 1585:. 1545:, 1541:, 1537:, 1533:, 1529:, 1525:, 1521:, 1517:, 1513:, 1509:, 1505:, 1501:, 1497:, 664:ex 227:. 1756:. 1732:: 1726:9 1718:" 1701:. 1685:" 1681:" 1665:. 1643:: 1597:. 1593:: 662:( 20:)

Index

Pseudonocardineae

Pseudonocardia pini
Scientific classification
Edit this classification
Bacteria
Actinomycetota
Actinomycetia
Pseudonocardiales
Pseudonocardiaceae
Synonyms
Actinomycetales
Pseudonocardineae
phylogenetic trees
Nakamurella multipartite
Frankiales
bootstrap
conserved signature indel
UMP kinase
molecular marker
Corynebacteriales
UDP-galactopyranose mutase
Geodermatophilus obscurus
Actinoalloteichus
Actinocrispum
Actinokineospora
Actinomycetospora
Actinophytocola
Actinopolyspora
Actinorectispora

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