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Sensing of phage-triggered ion cascades

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that produces a voltage depending on the instantaneous ratio of local concentrations. While the concentrations are fluctuating, an alternating random voltage difference will appear between the electrodes. According to the experimental studies, whenever there is an ongoing phage infection, the power
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as indicators to trigger an ionic response by the bacteria during phage infection. Microscopic metal electrodes detect the random fluctuations of the electrochemical potential due to the stochastic fluctuations of the ionic concentration gradient caused by the phage infection of bacteria. The
81:, and durability originating from the robustness of phages. An idealistic SEPTIC device may be as small as a pen and maybe able to identify a library of different bacteria within a few minutes measurement window. 31:, and durability originating from the robustness of phages. An idealistic SEPTIC device may be as small as a pen and maybe able to identify a library of different bacteria within a few minutes measurement window. 126: 69:
spectrum. In order to have a high sensitivity, a DC electrical field attracts the infected bacteria (which are charged due to ion imbalance) to the electrode with the relevant polarization.
190:"L.B. Kish, M. Cheng, J.U. Kim, S. Seo, M.D. King, R. Young, A. Der, G. Schmera, "Estimation of the detection limits of the phage-invasion based identification of bacteria", 27:
in fluid medium. The advantages of SEPTIC are the specificity and speed (needs only a few minutes) offered by the characteristics of phage infection, the sensitivity due to
295: 166:"M. Dobozi-King, S. Seo, J.U. Kim, R. Young, M. Cheng, L.B. Kish, "Rapid detection and identification of bacteria: SEnsing of Phage-Triggered Ion Cascade (SEPTIC)", 217:"J.R. Biard, L.B. Kish, "Enhancing the sensitivity of the SEPTIC bacterium sensing method by concentrating the phage-infected bacteria via DC electrical current", 77:
The advantages of SEPTIC are the specificity and speed (needs only a few minutes) offered by the characteristics of phage infection, the sensitivity due to
310: 109:) utilizes the AC impedance fluctuations at related arrangements, and it promises higher sensitivity and less dependence on the electrodes. 243:
Gabor Schmera; Kish (2010). "G. Schmera, L.B. Kish, "Bacteria Identification by Phage Induced Impedance Fluctuation Analysis (BIPIF)",
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and Maria Dobozi-King in 2004, and developed and demonstrated at the Electrical and Computer Engineering department of
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Homepage of the SEPTIC method at the Department of Electrical and Computer Engineering, Texas A&M University
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electrode pair in the electrolyte with different local ion concentrations at the vicinity of electrodes form an
94: 165: 101:(NIH), and Bob Biard. A new, related scheme, BIPIF, that has recently been conceived and analyzed by 45: 50: 189: 248: 216: 106: 98: 291:
Ry Young's phage lab at the Department of Biochemistry and Biophysics, Texas A&M University
62: 102: 90: 285: 304: 40: 268: 66: 147: 253: 290: 23:) is a prompt bacterium identification method based on 97:in collaboration with Mosong Cheng, Ry Young, 8: 168:Journal of Biological Physics and Chemistry 142: 140: 89:The SEPTIC concept was first conceived by 252: 65:while, without phage infection, it is a 238: 236: 211: 209: 118: 17:Sensing of phage-triggered ion cascades 7: 269:"Featuring SEPTIC in Nanotechwire" 127:"The SEPTIC patent description in 14: 49:density spectrum of the measured 311:Biological techniques and tools 148:"Feature article on SEPTIC in 1: 219:Fluctuation and Noise Letters 192:Fluctuation and Noise Letters 79:fluctuation-enhanced sensing 29:fluctuation-enhanced sensing 25:fluctuation-enhanced sensing 105:and Gabor Schmera (SPAWAR, 332: 296:SEPTIC in Acronym Finder 95:Texas A&M University 245:US Navy patent pending 316:Laboratory equipment 247:; to be published". 46:electrochemical cell 107:United States Navy 99:Sergey M. Bezrukov 224:(2005) L153-L158" 197:(2005) L105-L108" 323: 273: 272: 265: 259: 258: 256: 240: 231: 230: 228: 213: 204: 203: 201: 186: 180: 179: 177: 162: 156: 155: 154:. 14 April 2005. 144: 135: 134: 123: 61: 52:electronic noise 39:SEPTIC utilizes 331: 330: 326: 325: 324: 322: 321: 320: 301: 300: 282: 277: 276: 267: 266: 262: 242: 241: 234: 226: 215: 214: 207: 199: 188: 187: 183: 175: 164: 163: 159: 146: 145: 138: 125: 124: 120: 115: 87: 75: 56: 37: 12: 11: 5: 329: 327: 319: 318: 313: 303: 302: 299: 298: 293: 288: 281: 280:External links 278: 275: 274: 260: 232: 205: 181: 157: 136: 117: 116: 114: 111: 103:Laszlo B. Kish 91:Laszlo B. Kish 86: 83: 74: 71: 63:noise spectrum 41:bacteriophages 36: 33: 13: 10: 9: 6: 4: 3: 2: 328: 317: 314: 312: 309: 308: 306: 297: 294: 292: 289: 287: 284: 283: 279: 270: 264: 261: 255: 250: 246: 239: 237: 233: 225: 223: 220: 212: 210: 206: 198: 196: 193: 185: 182: 174: 172: 169: 161: 158: 153: 151: 150:The Economist 143: 141: 137: 132: 130: 122: 119: 112: 110: 108: 104: 100: 96: 92: 84: 82: 80: 72: 70: 68: 64: 60: 54: 53: 47: 42: 35:The mechanism 34: 32: 30: 26: 22: 18: 263: 244: 221: 218: 194: 191: 184: 170: 167: 160: 149: 128: 121: 88: 76: 58: 55:will have a 51: 38: 20: 16: 15: 173:(2005) 3–7" 129:PATENTSCOPE 305:Categories 113:References 73:Advantages 254:1004.0147 152:magazine" 67:1/f noise 85:History 21:SEPTIC 249:arXiv 227:(PDF) 200:(PDF) 176:(PDF) 307:: 235:^ 208:^ 139:^ 57:1/ 271:. 257:. 251:: 229:. 222:5 202:. 195:5 178:. 171:5 133:. 131:" 59:f 19:(

Index

fluctuation-enhanced sensing
fluctuation-enhanced sensing
bacteriophages
electrochemical cell
electronic noise
noise spectrum
1/f noise
fluctuation-enhanced sensing
Laszlo B. Kish
Texas A&M University
Sergey M. Bezrukov
Laszlo B. Kish
United States Navy
"The SEPTIC patent description in PATENTSCOPE"


"Feature article on SEPTIC in The Economist magazine"
"M. Dobozi-King, S. Seo, J.U. Kim, R. Young, M. Cheng, L.B. Kish, "Rapid detection and identification of bacteria: SEnsing of Phage-Triggered Ion Cascade (SEPTIC)", Journal of Biological Physics and Chemistry 5 (2005) 3–7"
"L.B. Kish, M. Cheng, J.U. Kim, S. Seo, M.D. King, R. Young, A. Der, G. Schmera, "Estimation of the detection limits of the phage-invasion based identification of bacteria", Fluctuation and Noise Letters 5 (2005) L105-L108"


"J.R. Biard, L.B. Kish, "Enhancing the sensitivity of the SEPTIC bacterium sensing method by concentrating the phage-infected bacteria via DC electrical current", Fluctuation and Noise Letters 5 (2005) L153-L158"


arXiv
1004.0147
"Featuring SEPTIC in Nanotechwire"
Homepage of the SEPTIC method at the Department of Electrical and Computer Engineering, Texas A&M University
Ry Young's phage lab at the Department of Biochemistry and Biophysics, Texas A&M University
SEPTIC in Acronym Finder

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