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Transactivation domain

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126: 2686:
Lallet S, Garreau H, Garmendia-Torres C, Szestakowska D, Boy-Marcotte E, Quevillon-Chéruel S, Jacquet M (Oct 2006). "Role of Gal11, a component of the RNA polymerase II mediator in stress-induced hyperphosphorylation of Msn2 in Saccharomyces cerevisiae".
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Thakur JK, Arthanari H, Yang F, Pan SJ, Fan X, Breger J, Frueh DP, Gulshan K, Li DK, Mylonakis E, Struhl K, Moye-Rowley WS, Cormack BP, Wagner G, Näär AM (Apr 2008). "A nuclear receptor-like pathway regulating multidrug resistance in fungi".
240:. Positions 1, 3-4, and 7 of the 9aaTAD are the main residues that interact with KIX. Interactions of Gal4, Pdr1 and Gcn4 with Taf9 have been observed. 9aaTAD is a common transactivation domain which recruits multiple general coactivators 161:
in mammals. The definition largely overlaps with an "acidic" family definition. A 9aaTAD prediction tool is available. 9aaTADs tend to have an associated 3-aa hydrophobic (usually Leu-rich) region immediately to its N-terminal.
1566:"Cooperativity in transcription factor binding to the coactivator CREB-binding protein (CBP). The mixed lineage leukemia protein (MLL) activation domain binds to an allosteric site on the KIX domain" 2271:
Kim YJ, Björklund S, Li Y, Sayre MH, Kornberg RD (May 1994). "A multiprotein mediator of transcriptional activation and its interaction with the C-terminal repeat domain of RNA polymerase II".
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Alternatively, since similar amino acid compositions does not necessarily mean similar activation pathways, TADs can be grouped by the process they stimulate, either initiation or elongation.
2228:
Badi L, Barberis A (Aug 2001). "Proteins that genetically interact with the Saccharomyces cerevisiae transcription factor Gal11p emphasize its role in the initiation-elongation transition".
2724:"TFIIB and subunits of the SAGA complex are involved in transcriptional activation of phospholipid biosynthetic genes by the regulatory protein Ino2 in the yeast Saccharomyces cerevisiae" 1705:
BrĂĽschweiler S, Schanda P, Kloiber K, Brutscher B, Kontaxis G, Konrat R, Tollinger M (Mar 2009). "Direct observation of the dynamic process underlying allosteric signal transmission".
65:). TADs are named after their amino acid composition. These amino acids are either essential for the activity or simply the most abundant in the TAD. Transactivation by the 137:
Nine-amino-acid transactivation domain (9aaTAD) defines a domain common to a large superfamily of eukaryotic transcription factors represented by Gal4, Oaf1, Leu3, Rtg3,
1136:
Mermod N, O'Neill EA, Kelly TJ, Tjian R (August 1989). "The proline-rich transcriptional activator of CTF/NF-I is distinct from the replication and DNA binding domain".
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Hope IA, Mahadevan S, Struhl K (Jun 1988). "Structural and functional characterization of the short acidic transcriptional activation region of yeast GCN4 protein".
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Piskacek S, Gregor M, Nemethova M, Grabner M, Kovarik P, Piskacek M (Jun 2007). "Nine-amino-acid transactivation domain: establishment and prediction utilities".
1666:"Roles of phosphorylation and helix propensity in the binding of the KIX domain of CREB-binding protein by constitutive (c-Myb) and inducible (CREB) activators" 2763:
Mizuno T, Harashima S (Apr 2003). "Gal11 is a general activator of basal transcription, whose activity is regulated by the general repressor Sin4 in yeast".
2952:"TFIID and Spt-Ada-Gcn5-acetyltransferase functions probed by genome-wide synthetic genetic array analysis using a Saccharomyces cerevisiae taf9-ts allele" 1740:
Liu GH, Qu J, Shen X (May 2008). "NF-kappaB/p65 antagonizes Nrf2-ARE pathway by depriving CBP from Nrf2 and facilitating recruitment of HDAC3 to MafK".
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Courey AJ, Holtzman DA, Jackson SP, Tjian R (December 1989). "Synergistic activation by the glutamine-rich domains of human transcription factor Sp1".
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Lim MK, Tang V, Le Saux A, SchĂĽller J, Bongards C, Lehming N (Nov 2007). "Gal11p dosage-compensates transcriptional activator deletions via Taf14p".
2911:"Use of a genetically introduced cross-linker to identify interaction sites of acidic activators within native transcription factor IID and SAGA" 1435:
Uesugi M, Nyanguile O, Lu H, Levine AJ, Verdine GL (Aug 1997). "Induced alpha helix in the VP16 activation domain upon binding to a human TAF".
2189:"A genome-wide analysis of transcriptional effect of Gal11 in Saccharomyces cerevisiae: an application of "mini-array hybridization technique"" 1240: 1617:"Solution structure of the KIX domain of CBP bound to the transactivation domain of CREB: a model for activator:coactivator interactions" 170: 158: 1983:"Regulation by phosphorylation of the relative affinities of the N-terminal transactivation domains of p53 for p300 domains and Mdm2" 1826:"Nuclear factor of activated T cells (NFAT)-dependent transactivation regulated by the coactivators p300/CREB-binding protein (CBP)" 2316:"GAL11 protein, an auxiliary transcription activator for genes encoding galactose-metabolizing enzymes in Saccharomyces cerevisiae" 890:"The transcriptional activator GCN4 contains multiple activation domains that are critically dependent on hydrophobic amino acids" 3065: 996:
Mitchell PJ, Tjian R (July 1989). "Transcriptional regulation in mammalian cells by sequence-specific DNA binding proteins".
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acidic domains (called also “acid blobs” or “negative noodles", rich in D and E amino acids, present in Gal4, Gcn4 and VP16).
2030:
Feng H, Jenkins LM, Durell SR, Hayashi R, Mazur SJ, Cherry S, Tropea JE, Miller M, Wlodawer A, Appella E, Bai Y (Feb 2009).
939:"Pattern of aromatic and hydrophobic amino acids critical for one of two subdomains of the VP16 transcriptional activator" 1039:
Sadowski I, Ma J, Triezenberg S, Ptashne M (October 1988). "GAL4-VP16 is an unusually potent transcriptional activator".
2860:"Mediator subunit Gal11p/MED15 is required for fatty acid-dependent gene activation by yeast transcription factor Oaf1p" 842:
Hope IA, Struhl K (Sep 1986). "Functional dissection of a eukaryotic transcriptional activator protein, GCN4 of yeast".
202: 650:
Sadowski I, Ma J, Triezenberg S, Ptashne M (Oct 1988). "GAL4-VP16 is an unusually potent transcriptional activator".
54: 2365:"The Saccharomyces cerevisiae SPT13/GAL11 gene has both positive and negative regulatory roles in transcription" 3070: 520: 88: 1775:
Bayly R, Murase T, Hyndman BD, Savage R, Nurmohamed S, Munro K, Casselman R, Smith SP, LeBrun DP (Sep 2006).
1577: 1181:"Drosophila tissue-specific transcription factor NTF-1 contains a novel isoleucine-rich activation motif" 703:"Mutational analysis of a transcriptional activation region of the VP16 protein of herpes simplex virus" 570:"Activation functions 1 and 2 of nuclear receptors: molecular strategies for transcriptional activation" 205:. p53 9aaTADs interact with TAF9, GCN5 and with multiple domains of CBP/p300 (KIX, TAZ1,TAZ2 and IBiD). 1924:"Four domains of p300 each bind tightly to a sequence spanning both transactivation subdomains of p53" 2816: 2474: 2092: 1935: 1389: 1330: 1048: 1005: 950: 800: 659: 549: 99: 46: 43: 1582: 544: 2140:"Multivalent binding of p53 to the STAGA complex mediates coactivator recruitment after UV damage" 2840: 2788: 2520:
Swanson MJ, Qiu H, Sumibcay L, Krueger A, Kim SJ, Natarajan K, Yoon S, Hinnebusch AG (Apr 2003).
2296: 2253: 2081:"Cooperative regulation of p53 by modulation of ternary complex formation with CBP/p300 and HDM2" 1646: 1161: 1118: 1072: 867: 824: 683: 208:
The KIX domain of general coactivators Med15(Gal11) interacts with 9aaTAD transcription factors
3030: 2981: 2932: 2891: 2832: 2780: 2745: 2704: 2668: 2633: 2592: 2551: 2502: 2443: 2394: 2345: 2288: 2245: 2210: 2169: 2120: 2061: 2012: 1963: 1904: 1855: 1806: 1757: 1722: 1687: 1638: 1597: 1542: 1493: 1452: 1417: 1358: 1296: 1256: 1236: 1202: 1153: 1110: 1064: 1021: 978: 919: 859: 816: 773: 732: 675: 632: 591: 3020: 3012: 3001:"Interaction between intrinsically disordered regions in transcription factors Sp1 and TAF4" 2971: 2963: 2922: 2881: 2871: 2824: 2772: 2735: 2696: 2660: 2623: 2582: 2541: 2533: 2492: 2482: 2433: 2425: 2384: 2376: 2335: 2327: 2280: 2237: 2200: 2159: 2151: 2110: 2100: 2051: 2043: 2002: 1994: 1953: 1943: 1894: 1886: 1845: 1837: 1796: 1788: 1749: 1714: 1677: 1628: 1587: 1532: 1524: 1483: 1444: 1407: 1397: 1348: 1338: 1288: 1246: 1228: 1192: 1145: 1102: 1056: 1013: 968: 958: 909: 901: 851: 808: 763: 722: 714: 667: 622: 581: 516: 1615:
Radhakrishnan I, PĂ©rez-Alvarado GC, Parker D, Dyson HJ, Montminy MR, Wright PE (Dec 1997).
110: 237: 233: 229: 217: 213: 66: 2820: 2478: 2096: 1939: 1393: 1334: 1052: 1009: 954: 804: 663: 69:
transcription factor is mediated by acidic amino acids, whereas hydrophobic residues in
3025: 3000: 2976: 2951: 2886: 2859: 2164: 2139: 2115: 2080: 2056: 2031: 2007: 1982: 1958: 1923: 1850: 1825: 1801: 1776: 1537: 1513:"Mapping the interactions of the p53 transactivation domain with the KIX domain of CBP" 1512: 1353: 1318: 1251: 701:
Sullivan SM, Horn PJ, Olson VA, Koop AH, Niu W, Ebright RH, Triezenberg SJ (Oct 1998).
17: 2587: 2570: 2546: 2521: 2497: 2462: 2389: 2364: 2340: 2315: 1899: 1874: 1633: 1616: 1378:"The alpha-helical FXXPhiPhi motif in p53: TAF interaction and discrimination by MDM2" 914: 889: 727: 702: 3059: 2844: 2740: 2723: 2700: 2571:"Independent recruitment in vivo by Gal4 of two complexes required for transcription" 2522:"A multiplicity of coactivators is required by Gcn4p at individual promoters in vivo" 2438: 2429: 2413: 2284: 1412: 1377: 1149: 1106: 973: 938: 855: 768: 751: 627: 610: 527:). Although such is not the case for every Q-rich TAD, Sp1 is shown to interact with 524: 2537: 2463:"A target essential for the activity of a nonacidic yeast transcriptional activator" 2257: 1650: 1165: 871: 125: 2999:
Hibino E, Inoue R, Sugiyama M, Kuwahara J, Matsuzaki K, Hoshino M (November 2016).
2300: 2032:"Structural basis for p300 Taz2-p53 TAD1 binding and modulation by phosphorylation" 1122: 1076: 828: 687: 87:
glutamine-rich domains (contains multiple repetitions like "QQQXXXQQQ", present in
2792: 1448: 888:
Drysdale CM, Dueñas E, Jackson BM, Reusser U, Braus GH, Hinnebusch AG (Mar 1995).
2628: 2612:"Function of a eukaryotic transcription activator during the transcription cycle" 2611: 1753: 1343: 1232: 2967: 2079:
Ferreon JC, Lee CW, Arai M, Martinez-Yamout MA, Dyson HJ, Wright PE (Apr 2009).
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Frietze S, Farnham PJ (14 April 2011). "Transcription Factor Effector Domains".
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Proceedings of the National Academy of Sciences of the United States of America
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Proceedings of the National Academy of Sciences of the United States of America
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Proceedings of the National Academy of Sciences of the United States of America
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Proceedings of the National Academy of Sciences of the United States of America
943:
Proceedings of the National Academy of Sciences of the United States of America
2776: 2664: 2047: 1777:"Critical role for a single leucine residue in leukemia induction by E2A-PBX1" 1561: 174: 130: 1488: 1471: 1402: 718: 2205: 2188: 2105: 1948: 1841: 1017: 3034: 2985: 2936: 2927: 2910: 2895: 2876: 2836: 2784: 2749: 2708: 2672: 2637: 2596: 2555: 2506: 2487: 2447: 2249: 2214: 2173: 2124: 2065: 2016: 1967: 1890: 1810: 1761: 1726: 1691: 1682: 1665: 1601: 1592: 1565: 1546: 1497: 1421: 1362: 1300: 1260: 595: 2909:
Klein J, Nolden M, Sanders SL, Kirchner J, Weil PA, Melcher K (Feb 2003).
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Thakur JK, Arthanari H, Yang F, Chau KH, Wagner G, Näär AM (Feb 2009).
2414:"In vivo requirement of activator-specific binding targets of mediator" 94:
proline-rich domains (contains repetitions like "PPPXXXPPP" present in
50: 1718: 1528: 3016: 1060: 812: 671: 512: 1511:
Lee CW, Arai M, Martinez-Yamout MA, Dyson HJ, Wright PE (Mar 2009).
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Dietz M, Heyken WT, Hoppen J, Geburtig S, SchĂĽller HJ (May 2003).
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Piskacek M, Havelka M, Rezacova M, Knight A (12 September 2016).
1875:"Interaction and functional collaboration of p300 and C/EBPbeta" 1472:"Divergent hTAFII31-binding motifs hidden in activation domains" 528: 253: 241: 225: 221: 209: 198: 182: 178: 150: 142: 138: 74: 70: 2412:
Park JM, Kim HS, Han SJ, Hwang MS, Lee YC, Kim YJ (Dec 2000).
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Biochimica et Biophysica Acta (BBA) - Molecular Cell Research
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Zor T, Mayr BM, Dyson HJ, Montminy MR, Wright PE (Nov 2002).
1227:. Subcellular Biochemistry. Vol. 52. pp. 261–277. 568:
Wärnmark A, Treuter E, Wright AP, Gustafsson JA (Oct 2003).
752:"Mutants of GAL4 protein altered in an activation function" 109:
isoleucine-rich domains (repetitions "IIXXII", present in
2461:
Lu Z, Ansari AZ, Lu X, Ogirala A, Ptashne M (Jun 2002).
77:
are referred to as acidic or hydrophobic, respectively.
1922:
Teufel DP, Freund SM, Bycroft M, Fersht AR (Apr 2007).
1319:"The 9aaTAD Transactivation Domains: From Gal4 to p53" 1088: 1086: 57:. These binding sites are frequently referred to as 2187:
Fukasawa T, Fukuma M, Yano K, Sakurai H (Feb 2001).
80:
In general we can distinguish four classes of TADs:
73:play a similar role. Hence, the TADs in Gal4 and 611:"A new class of yeast transcriptional activators" 2314:Suzuki Y, Nogi Y, Abe A, Fukasawa T (Nov 1988). 197:interact directly with the general coactivators 2950:Milgrom E, West RW, Gao C, Shen WC (Nov 2005). 1312: 1310: 1274: 1272: 1270: 1218: 1216: 937:Regier JL, Shen F, Triezenberg SJ (Feb 1993). 2610:Fishburn J, Mohibullah N, Hahn S (Apr 2005). 883: 881: 8: 1981:Teufel DP, Bycroft M, Fersht AR (May 2009). 1873:Mink S, Haenig B, Klempnauer KH (Nov 1997). 3024: 2975: 2926: 2885: 2875: 2739: 2627: 2586: 2545: 2496: 2486: 2437: 2388: 2339: 2204: 2163: 2114: 2104: 2055: 2006: 1957: 1947: 1898: 1849: 1800: 1681: 1632: 1591: 1581: 1536: 1487: 1411: 1401: 1352: 1342: 1250: 1196: 972: 962: 913: 767: 726: 626: 585: 1707:Journal of the American Chemical Society 258: 560: 49:which contains binding sites for other 1824:GarcĂ­a-RodrĂ­guez C, Rao A (Jun 1998). 1470:Choi Y, Asada S, Uesugi M (May 2000). 511:Glutamine (Q)-rich TADs are found in 260:Example 9aaTADs and KIX interactions 7: 1830:The Journal of Experimental Medicine 27:Transcription factor scaffold domain 2915:The Journal of Biological Chemistry 2864:The Journal of Biological Chemistry 1670:The Journal of Biological Chemistry 1570:The Journal of Biological Chemistry 1560:Goto NK, Zor T, Martinez-Yamout M, 1476:The Journal of Biological Chemistry 1225:A Handbook of Transcription Factors 2363:Fassler JS, Winston F (Dec 1989). 25: 2569:Bryant GO, Ptashne M (May 2003). 2138:Gamper AM, Roeder RG (Apr 2008). 1376:Uesugi M, Verdine GL (Dec 1999). 1179:Attardi LD, Tjian R (July 1993). 2741:10.1046/j.1365-2958.2003.03501.x 2701:10.1111/j.1365-2958.2006.05363.x 2430:10.1128/mcb.20.23.8709-8719.2000 2765:Molecular Genetics and Genomics 2538:10.1128/MCB.23.8.2800-2820.2003 2230:Molecular Genetics and Genomics 2526:Molecular and Cellular Biology 2418:Molecular and Cellular Biology 2369:Molecular and Cellular Biology 2320:Molecular and Cellular Biology 2144:Molecular and Cellular Biology 1879:Molecular and Cellular Biology 1781:Molecular and Cellular Biology 894:Molecular and Cellular Biology 750:Gill G, Ptashne M (Oct 1987). 271:Peptide-KIX interaction (NMR) 1: 2588:10.1016/S1097-2765(03)00144-8 1634:10.1016/S0092-8674(00)80463-8 1449:10.1126/science.277.5330.1310 165:9aaTAD transcription factors 2653:Journal of Molecular Biology 2629:10.1016/j.molcel.2005.03.029 2285:10.1016/0092-8674(94)90221-6 1754:10.1016/j.bbamcr.2008.01.002 1344:10.1371/journal.pone.0162842 1233:10.1007/978-90-481-9069-0_12 1150:10.1016/0092-8674(89)90108-6 1107:10.1016/0092-8674(89)90606-5 856:10.1016/0092-8674(86)90070-X 769:10.1016/0092-8674(87)90016-X 628:10.1016/0092-8674(87)90015-8 609:Ma J, Ptashne M (Oct 1987). 2968:10.1534/genetics.105.046557 1293:10.1016/j.ygeno.2007.02.003 531:(TAFII 130), a part of the 3087: 409:CREB-mutant binding to KIX 55:transcription coregulators 2777:10.1007/s00438-003-0810-x 2665:10.1016/j.jmb.2007.09.013 2048:10.1016/j.str.2008.12.009 1564:, Wright PE (Nov 2002). 1489:10.1074/jbc.275.21.15912 1403:10.1073/pnas.96.26.14801 424:TAD homology to CREB/KIX 2106:10.1073/pnas.0811023106 1949:10.1073/pnas.0702010104 1842:10.1084/jem.187.12.2031 1185:Genes & Development 1018:10.1126/science.2667136 574:Molecular Endocrinology 36:trans-activating domain 18:Trans-activating domain 3051:9aaTAD prediction tool 2928:10.1074/jbc.M212514200 2877:10.1074/jbc.M808263200 2728:Molecular Microbiology 2689:Molecular Microbiology 2488:10.1073/pnas.092263499 1891:10.1128/mcb.17.11.6609 1683:10.1074/jbc.M207361200 1593:10.1074/jbc.M207660200 719:10.1093/nar/26.19.4487 707:Nucleic Acids Research 134: 32:transactivation domain 3066:Transcription factors 2381:10.1128/mcb.9.12.5602 2332:10.1128/mcb.8.11.4991 2242:10.1007/s004380100505 2206:10.1093/dnares/8.1.23 1198:10.1101/gad.7.7b.1341 964:10.1073/pnas.90.3.883 906:10.1128/mcb.15.3.1220 439:Pdr1 and Oaf1 homolog 128: 2156:10.1128/MCB.01461-07 1793:10.1128/MCB.02025-05 587:10.1210/me.2002-0384 550:Transcription factor 59:activation functions 44:transcription factor 2829:10.1038/nature06836 2821:2008Natur.452..604T 2479:2002PNAS...99.8591L 2097:2009PNAS..106.6591F 1999:10.1038/onc.2009.71 1940:2007PNAS..104.7009T 1394:1999PNAS...9614801U 1335:2016PLoSO..1162842P 1053:1988Natur.335..563S 1010:1989Sci...245..371M 955:1993PNAS...90..883R 805:1988Natur.333..635H 664:1988Natur.335..563S 545:DNA-binding protein 261: 259: 135: 3011:(11): 2006–2017. 1719:10.1021/ja809947w 1529:10.1021/bi802055v 1242:978-90-481-9068-3 504: 503: 145:in yeast, and by 16:(Redirected from 3078: 3039: 3038: 3028: 3017:10.1002/pro.3013 2996: 2990: 2989: 2979: 2947: 2941: 2940: 2930: 2906: 2900: 2899: 2889: 2879: 2855: 2849: 2848: 2803: 2797: 2796: 2760: 2754: 2753: 2743: 2719: 2713: 2712: 2683: 2677: 2676: 2648: 2642: 2641: 2631: 2607: 2601: 2600: 2590: 2566: 2560: 2559: 2549: 2517: 2511: 2510: 2500: 2490: 2458: 2452: 2451: 2441: 2409: 2403: 2402: 2392: 2360: 2354: 2353: 2343: 2311: 2305: 2304: 2268: 2262: 2261: 2225: 2219: 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21: 3086: 3085: 3081: 3080: 3079: 3077: 3076: 3075: 3071:Protein domains 3056: 3055: 3047: 3042: 3005:Protein Science 2998: 2997: 2993: 2949: 2948: 2944: 2908: 2907: 2903: 2857: 2856: 2852: 2815:(7187): 604–9. 2805: 2804: 2800: 2762: 2761: 2757: 2721: 2720: 2716: 2685: 2684: 2680: 2650: 2649: 2645: 2609: 2608: 2604: 2568: 2567: 2563: 2519: 2518: 2514: 2460: 2459: 2455: 2424:(23): 8709–19. 2411: 2410: 2406: 2362: 2361: 2357: 2313: 2312: 2308: 2270: 2269: 2265: 2227: 2226: 2222: 2186: 2185: 2181: 2137: 2136: 2132: 2078: 2077: 2073: 2029: 2028: 2024: 1980: 1979: 1975: 1934:(17): 7009–14. 1921: 1920: 1916: 1885:(11): 6609–17. 1872: 1871: 1867: 1823: 1822: 1818: 1787:(17): 6442–52. 1774: 1773: 1769: 1739: 1738: 1734: 1704: 1703: 1699: 1676:(44): 42241–8. 1663: 1662: 1658: 1614: 1613: 1609: 1583:10.1.1.615.9401 1559: 1558: 1554: 1523:(10): 2115–24. 1510: 1509: 1505: 1482:(21): 15912–6. 1469: 1468: 1464: 1434: 1433: 1429: 1388:(26): 14801–6. 1375: 1374: 1370: 1329:(9): e0162842. 1316: 1315: 1308: 1278: 1277: 1268: 1243: 1222: 1221: 1214: 1191:(7B): 1341–53. 1178: 1177: 1173: 1135: 1134: 1130: 1092: 1091: 1084: 1047:(6190): 563–4. 1038: 1037: 1033: 1004:(4916): 371–8. 995: 994: 990: 936: 935: 931: 887: 886: 879: 841: 840: 836: 790: 789: 785: 749: 748: 744: 713:(19): 4487–96. 700: 699: 695: 658:(6190): 563–4. 649: 648: 644: 608: 607: 603: 567: 566: 562: 558: 541: 509: 493: 483: 478: 463: 453: 448: 433: 418: 403: 375: 370: 355: 341: 336: 322: 317: 303: 298: 284: 279: 123: 47:scaffold domain 28: 23: 22: 15: 12: 11: 5: 3084: 3082: 3074: 3073: 3068: 3058: 3057: 3054: 3053: 3046: 3045:External links 3043: 3041: 3040: 2991: 2942: 2921:(9): 6779–86. 2901: 2850: 2798: 2755: 2734:(4): 1119–30. 2714: 2678: 2643: 2616:Molecular Cell 2602: 2575:Molecular Cell 2561: 2532:(8): 2800–20. 2512: 2473:(13): 8591–6. 2453: 2404: 2375:(12): 5602–9. 2355: 2326:(11): 4991–9. 2306: 2279:(4): 599–608. 2263: 2236:(6): 1076–86. 2220: 2179: 2150:(8): 2517–27. 2130: 2091:(16): 6591–6. 2071: 2022: 1993:(20): 2112–8. 1973: 1914: 1865: 1836:(12): 2031–6. 1816: 1767: 1732: 1697: 1656: 1607: 1552: 1503: 1462: 1427: 1368: 1306: 1266: 1241: 1212: 1171: 1128: 1082: 1031: 988: 929: 900:(3): 1220–33. 877: 834: 783: 742: 693: 642: 601: 580:(10): 1901–9. 559: 557: 554: 553: 552: 547: 540: 537: 508: 507:Glutamine-rich 505: 502: 501: 496: 491: 487: 486: 481: 476: 472: 471: 466: 461: 457: 456: 451: 446: 442: 441: 436: 431: 427: 426: 421: 416: 412: 411: 406: 401: 397: 396: 373: 368: 364: 363: 358: 353: 349: 348: 339: 334: 330: 329: 320: 315: 311: 310: 301: 296: 292: 291: 282: 277: 273: 272: 269: 266: 122: 119: 115: 114: 107: 92: 85: 26: 24: 14: 13: 10: 9: 6: 4: 3: 2: 3083: 3072: 3069: 3067: 3064: 3063: 3061: 3052: 3049: 3048: 3044: 3036: 3032: 3027: 3022: 3018: 3014: 3010: 3006: 3002: 2995: 2992: 2987: 2983: 2978: 2973: 2969: 2965: 2962:(3): 959–73. 2961: 2957: 2953: 2946: 2943: 2938: 2934: 2929: 2924: 2920: 2916: 2912: 2905: 2902: 2897: 2893: 2888: 2883: 2878: 2873: 2870:(7): 4422–8. 2869: 2865: 2861: 2854: 2851: 2846: 2842: 2838: 2834: 2830: 2826: 2822: 2818: 2814: 2810: 2802: 2799: 2794: 2790: 2786: 2782: 2778: 2774: 2770: 2766: 2759: 2756: 2751: 2747: 2742: 2737: 2733: 2729: 2725: 2718: 2715: 2710: 2706: 2702: 2698: 2695:(2): 438–52. 2694: 2690: 2682: 2679: 2674: 2670: 2666: 2662: 2658: 2654: 2647: 2644: 2639: 2635: 2630: 2625: 2622:(3): 369–78. 2621: 2617: 2613: 2606: 2603: 2598: 2594: 2589: 2584: 2581:(5): 1301–9. 2580: 2576: 2572: 2565: 2562: 2557: 2553: 2548: 2543: 2539: 2535: 2531: 2527: 2523: 2516: 2513: 2508: 2504: 2499: 2494: 2489: 2484: 2480: 2476: 2472: 2468: 2464: 2457: 2454: 2449: 2445: 2440: 2435: 2431: 2427: 2423: 2419: 2415: 2408: 2405: 2400: 2396: 2391: 2386: 2382: 2378: 2374: 2370: 2366: 2359: 2356: 2351: 2347: 2342: 2337: 2333: 2329: 2325: 2321: 2317: 2310: 2307: 2302: 2298: 2294: 2290: 2286: 2282: 2278: 2274: 2267: 2264: 2259: 2255: 2251: 2247: 2243: 2239: 2235: 2231: 2224: 2221: 2216: 2212: 2207: 2202: 2198: 2194: 2190: 2183: 2180: 2175: 2171: 2166: 2161: 2157: 2153: 2149: 2145: 2141: 2134: 2131: 2126: 2122: 2117: 2112: 2107: 2102: 2098: 2094: 2090: 2086: 2082: 2075: 2072: 2067: 2063: 2058: 2053: 2049: 2045: 2042:(2): 202–10. 2041: 2037: 2033: 2026: 2023: 2018: 2014: 2009: 2004: 2000: 1996: 1992: 1988: 1984: 1977: 1974: 1969: 1965: 1960: 1955: 1950: 1945: 1941: 1937: 1933: 1929: 1925: 1918: 1915: 1910: 1906: 1901: 1896: 1892: 1888: 1884: 1880: 1876: 1869: 1866: 1861: 1857: 1852: 1847: 1843: 1839: 1835: 1831: 1827: 1820: 1817: 1812: 1808: 1803: 1798: 1794: 1790: 1786: 1782: 1778: 1771: 1768: 1763: 1759: 1755: 1751: 1748:(5): 713–27. 1747: 1743: 1736: 1733: 1728: 1724: 1720: 1716: 1713:(8): 3063–8. 1712: 1708: 1701: 1698: 1693: 1689: 1684: 1679: 1675: 1671: 1667: 1660: 1657: 1652: 1648: 1644: 1640: 1635: 1630: 1627:(6): 741–52. 1626: 1622: 1618: 1611: 1608: 1603: 1599: 1594: 1589: 1584: 1579: 1575: 1571: 1567: 1563: 1556: 1553: 1548: 1544: 1539: 1534: 1530: 1526: 1522: 1518: 1514: 1507: 1504: 1499: 1495: 1490: 1485: 1481: 1477: 1473: 1466: 1463: 1458: 1454: 1450: 1446: 1442: 1438: 1431: 1428: 1423: 1419: 1414: 1409: 1404: 1399: 1395: 1391: 1387: 1383: 1379: 1372: 1369: 1364: 1360: 1355: 1350: 1345: 1340: 1336: 1332: 1328: 1324: 1320: 1313: 1311: 1307: 1302: 1298: 1294: 1290: 1287:(6): 756–68. 1286: 1282: 1275: 1273: 1271: 1267: 1262: 1258: 1253: 1248: 1244: 1238: 1234: 1230: 1226: 1219: 1217: 1213: 1208: 1204: 1199: 1194: 1190: 1186: 1182: 1175: 1172: 1167: 1163: 1159: 1155: 1151: 1147: 1144:(4): 741–53. 1143: 1139: 1132: 1129: 1124: 1120: 1116: 1112: 1108: 1104: 1101:(5): 827–36. 1100: 1096: 1089: 1087: 1083: 1078: 1074: 1070: 1066: 1062: 1058: 1054: 1050: 1046: 1042: 1035: 1032: 1027: 1023: 1019: 1015: 1011: 1007: 1003: 999: 992: 989: 984: 980: 975: 970: 965: 960: 956: 952: 948: 944: 940: 933: 930: 925: 921: 916: 911: 907: 903: 899: 895: 891: 884: 882: 878: 873: 869: 865: 861: 857: 853: 850:(6): 885–94. 849: 845: 838: 835: 830: 826: 822: 818: 814: 810: 806: 802: 798: 794: 787: 784: 779: 775: 770: 765: 761: 757: 753: 746: 743: 738: 734: 729: 724: 720: 716: 712: 708: 704: 697: 694: 689: 685: 681: 677: 673: 669: 665: 661: 657: 653: 646: 643: 638: 634: 629: 624: 620: 616: 612: 605: 602: 597: 593: 588: 583: 579: 575: 571: 564: 561: 555: 551: 548: 546: 543: 542: 538: 536: 534: 530: 526: 525:Sp/KLF family 522: 518: 514: 506: 500: 497: 492: 489: 488: 482: 477: 474: 473: 470: 467: 462: 459: 458: 452: 447: 444: 443: 440: 437: 432: 429: 428: 425: 422: 417: 414: 413: 410: 407: 402: 399: 398: 394: 390: 386: 382: 378: 374: 369: 366: 365: 362: 359: 354: 351: 350: 345: 340: 335: 332: 331: 326: 321: 316: 313: 312: 307: 302: 297: 294: 293: 288: 283: 278: 275: 274: 270: 267: 264: 263: 257: 255: 251: 247: 243: 239: 235: 231: 227: 223: 219: 215: 211: 206: 204: 200: 196: 192: 188: 184: 180: 176: 172: 168: 163: 160: 156: 152: 148: 144: 140: 132: 127: 121:Acidic/9aaTAD 120: 118: 112: 108: 105: 101: 97: 93: 90: 86: 83: 82: 81: 78: 76: 72: 68: 64: 60: 56: 52: 48: 45: 41: 37: 33: 19: 3008: 3004: 2994: 2959: 2955: 2945: 2918: 2914: 2904: 2867: 2863: 2853: 2812: 2808: 2801: 2771:(1): 68–77. 2768: 2764: 2758: 2731: 2727: 2717: 2692: 2688: 2681: 2656: 2652: 2646: 2619: 2615: 2605: 2578: 2574: 2564: 2529: 2525: 2515: 2470: 2466: 2456: 2421: 2417: 2407: 2372: 2368: 2358: 2323: 2319: 2309: 2276: 2272: 2266: 2233: 2229: 2223: 2199:(1): 23–31. 2196: 2193:DNA Research 2192: 2182: 2147: 2143: 2133: 2088: 2084: 2074: 2039: 2035: 2025: 1990: 1986: 1976: 1931: 1927: 1917: 1882: 1878: 1868: 1833: 1829: 1819: 1784: 1780: 1770: 1745: 1741: 1735: 1710: 1706: 1700: 1673: 1669: 1659: 1624: 1620: 1610: 1573: 1569: 1555: 1520: 1517:Biochemistry 1516: 1506: 1479: 1475: 1465: 1440: 1436: 1430: 1385: 1381: 1371: 1326: 1322: 1284: 1280: 1224: 1188: 1184: 1174: 1141: 1137: 1131: 1098: 1094: 1044: 1040: 1034: 1001: 997: 991: 949:(3): 883–7. 946: 942: 932: 897: 893: 847: 843: 837: 796: 792: 786: 762:(1): 121–6. 759: 755: 745: 710: 706: 696: 655: 651: 645: 621:(1): 113–9. 618: 614: 604: 577: 573: 563: 519:(Oct2), and 510: 499:Pdr1 homolog 498: 484:EDLYSILWSDWY 469:Oafl homolog 468: 438: 423: 408: 392: 388: 384: 380: 376: 360: 343: 324: 305: 286: 207: 164: 136: 116: 79: 62: 58: 39: 35: 31: 29: 2659:(1): 9–23. 494:T DLYH TLWN 479:E DLYS ILWS 464:D FFDY DLLF 449:D LFDY DFLV 434:D DVYN YLFD 419:D DVVQ YLNS 404:E AILA ELKK 371:R KILN DLSS 361:E2A homolog 356:E TLDF SLVT 342:PVGTDKELSDL 337:D LLDF SMMF 318:S DIMD FVLK 299:D DIEQ WFTE 280:E TFSD LWKL 3060:Categories 556:References 535:assembly. 523:(see also 325:LPSDIMDFVL 131:KIX domain 2845:205212715 2036:Structure 1578:CiteSeerX 454:DLFDYDFLV 304:QAMDDLMLS 295:p53 TAD2 276:p53 TAD1 133:complexes 3035:27515574 2986:16118188 2956:Genetics 2937:12501245 2896:19056732 2837:18385733 2785:12715155 2750:12753200 2709:17020582 2673:17919657 2638:15866178 2597:12769853 2556:12665580 2507:12084920 2448:11073972 2258:19287634 2250:11523780 2215:11258797 2174:18250150 2125:19357310 2066:19217391 2017:19363523 1987:Oncogene 1968:17438265 1811:16914730 1762:18241676 1727:19203263 1692:12196545 1651:17268267 1602:12205094 1562:Dyson HJ 1547:19220000 1498:10821850 1422:10611293 1363:27618436 1323:PLOS ONE 1301:17467953 1281:Genomics 1261:21557087 1166:22817940 872:40730692 596:12893880 539:See also 515:(Oct1), 400:CREBaB6 346:MMFPLPVT 306:PDDIEQWF 250:CBP/p300 224:, VP16, 203:CBP/p300 141:, Gln3, 53:such as 51:proteins 3026:5079245 2977:1456853 2887:3837390 2817:Bibcode 2475:Bibcode 2399:2685570 2350:3062377 2301:5002125 2293:8187178 2165:2293101 2116:2672497 2093:Bibcode 2057:2705179 2008:2685776 1959:1855428 1936:Bibcode 1909:9343424 1860:9625762 1851:2212364 1802:1592826 1643:9413984 1538:2765525 1457:9271577 1437:Science 1390:Bibcode 1354:5019370 1331:Bibcode 1252:4151296 1207:8330738 1158:2504497 1123:2910480 1115:2512012 1077:4276393 1069:3047590 1049:Bibcode 1026:2667136 1006:Bibcode 998:Science 983:8381535 951:Bibcode 924:7862116 864:3530496 829:2635634 821:3287180 801:Bibcode 778:3115592 737:9742254 688:4276393 680:3047590 660:Bibcode 637:3115591 379:EILSRRP 308:TEDPGPD 268:9aaTAD 265:Source 129:9aaTAD- 42:) is a 3033:  3023:  2984:  2974:  2935:  2894:  2884:  2843:  2835:  2809:Nature 2793:882139 2791:  2783:  2748:  2707:  2671:  2636:  2595:  2554:  2547:152555 2544:  2505:  2498:124323 2495:  2446:  2436:  2397:  2390:363730 2387:  2348:  2341:365593 2338:  2299:  2291:  2256:  2248:  2213:  2172:  2162:  2123:  2113:  2064:  2054:  2015:  2005:  1966:  1956:  1907:  1900:232514 1897:  1858:  1848:  1809:  1799:  1760:  1725:  1690:  1649:  1641:  1600:  1580:  1545:  1535:  1496:  1455:  1420:  1410:  1361:  1351:  1299:  1259:  1249:  1239:  1205:  1164:  1156:  1121:  1113:  1075:  1067:  1041:Nature 1024:  981:  971:  922:  915:230345 912:  870:  862:  827:  819:  793:Nature 776:  735:  728:147869 725:  686:  678:  652:Nature 635:  594:  517:POU2F2 513:POU2F1 287:FSDLWK 285:LSPEET 187:NF-IL6 2841:S2CID 2789:S2CID 2439:86488 2297:S2CID 2254:S2CID 1647:S2CID 1413:24728 1162:S2CID 1119:S2CID 1073:S2CID 974:45774 868:S2CID 825:S2CID 684:S2CID 533:TFIID 490:Pdr3 475:Pdr1 460:Pip2 445:Oaf1 430:Gal4 415:Gli3 367:CREB 352:Rtg3 323:DCGNI 246:MED15 195:NF-ÎşB 191:NFAT1 155:NF-ÎşB 111:NTF-1 104:Oct-2 96:c-jun 3031:PMID 2982:PMID 2933:PMID 2892:PMID 2833:PMID 2781:PMID 2746:PMID 2705:PMID 2669:PMID 2634:PMID 2593:PMID 2552:PMID 2503:PMID 2444:PMID 2395:PMID 2346:PMID 2289:PMID 2273:Cell 2246:PMID 2211:PMID 2170:PMID 2121:PMID 2062:PMID 2013:PMID 1964:PMID 1905:PMID 1856:PMID 1807:PMID 1758:PMID 1746:1783 1723:PMID 1688:PMID 1639:PMID 1621:Cell 1598:PMID 1543:PMID 1494:PMID 1453:PMID 1418:PMID 1359:PMID 1297:PMID 1257:PMID 1237:ISBN 1203:PMID 1154:PMID 1138:Cell 1111:PMID 1095:Cell 1065:PMID 1022:PMID 979:PMID 920:PMID 860:PMID 844:Cell 817:PMID 774:PMID 756:Cell 733:PMID 676:PMID 633:PMID 615:Cell 592:PMID 529:TAF4 344:LDFS 333:E2A 327:KNTP 314:MLL 254:GCN5 252:and 242:TAF9 238:P201 236:and 234:Ino2 230:Msn2 226:Pho4 222:Gcn4 218:Oaf1 214:Pdr1 210:Gal4 201:and 199:TAF9 193:and 183:HSF1 171:VP16 159:VP16 157:and 151:NFAT 143:Gcn4 139:Pho4 102:and 75:Gcn4 71:Gcn4 67:Gal4 30:The 3021:PMC 3013:doi 2972:PMC 2964:doi 2960:171 2923:doi 2919:278 2882:PMC 2872:doi 2868:284 2825:doi 2813:452 2773:doi 2769:269 2736:doi 2697:doi 2661:doi 2657:374 2624:doi 2583:doi 2542:PMC 2534:doi 2493:PMC 2483:doi 2434:PMC 2426:doi 2385:PMC 2377:doi 2336:PMC 2328:doi 2281:doi 2238:doi 2234:265 2201:doi 2160:PMC 2152:doi 2111:PMC 2101:doi 2089:106 2052:PMC 2044:doi 2003:PMC 1995:doi 1954:PMC 1944:doi 1932:104 1895:PMC 1887:doi 1846:PMC 1838:doi 1834:187 1797:PMC 1789:doi 1750:doi 1715:doi 1711:131 1678:doi 1674:277 1629:doi 1588:doi 1574:277 1533:PMC 1525:doi 1484:doi 1480:275 1445:doi 1441:277 1408:PMC 1398:doi 1349:PMC 1339:doi 1289:doi 1247:PMC 1229:doi 1193:doi 1146:doi 1103:doi 1057:doi 1045:335 1014:doi 1002:245 969:PMC 959:doi 910:PMC 902:doi 852:doi 809:doi 797:333 764:doi 723:PMC 715:doi 668:doi 656:335 623:doi 582:doi 521:Sp1 393:DAP 289:LPE 179:E2A 175:MLL 167:p53 147:p53 100:AP2 89:SP1 63:AFs 40:TAD 34:or 3062:: 3029:. 3019:. 3009:25 3007:. 3003:. 2980:. 2970:. 2958:. 2954:. 2931:. 2917:. 2913:. 2890:. 2880:. 2866:. 2862:. 2839:. 2831:. 2823:. 2811:. 2787:. 2779:. 2767:. 2744:. 2732:48 2730:. 2726:. 2703:. 2693:62 2691:. 2667:. 2655:. 2632:. 2620:18 2618:. 2614:. 2591:. 2579:11 2577:. 2573:. 2550:. 2540:. 2530:23 2528:. 2524:. 2501:. 2491:. 2481:. 2471:99 2469:. 2465:. 2442:. 2432:. 2422:20 2420:. 2416:. 2393:. 2383:. 2371:. 2367:. 2344:. 2334:. 2322:. 2318:. 2295:. 2287:. 2277:77 2275:. 2252:. 2244:. 2232:. 2209:. 2195:. 2191:. 2168:. 2158:. 2148:28 2146:. 2142:. 2119:. 2109:. 2099:. 2087:. 2083:. 2060:. 2050:. 2040:17 2038:. 2034:. 2011:. 2001:. 1991:28 1989:. 1985:. 1962:. 1952:. 1942:. 1930:. 1926:. 1903:. 1893:. 1883:17 1881:. 1877:. 1854:. 1844:. 1832:. 1828:. 1805:. 1795:. 1785:26 1783:. 1779:. 1756:. 1744:. 1721:. 1709:. 1686:. 1672:. 1668:. 1645:. 1637:. 1625:91 1623:. 1619:. 1596:. 1586:. 1572:. 1568:. 1541:. 1531:. 1521:48 1519:. 1515:. 1492:. 1478:. 1474:. 1451:. 1439:. 1416:. 1406:. 1396:. 1386:96 1384:. 1380:. 1357:. 1347:. 1337:. 1327:11 1325:. 1321:. 1309:^ 1295:. 1285:89 1283:. 1269:^ 1255:. 1245:. 1235:. 1215:^ 1201:. 1187:. 1183:. 1160:. 1152:. 1142:58 1140:. 1117:. 1109:. 1099:59 1097:. 1085:^ 1071:. 1063:. 1055:. 1043:. 1020:. 1012:. 1000:. 977:. 967:. 957:. 947:90 945:. 941:. 918:. 908:. 898:15 896:. 892:. 880:^ 866:. 858:. 848:46 846:. 823:. 815:. 807:. 795:. 772:. 760:51 758:. 754:. 731:. 721:. 711:26 709:. 705:. 682:. 674:. 666:. 654:. 631:. 619:51 617:. 613:. 590:. 578:17 576:. 572:. 391:SS 389:DL 385:IL 383:RK 381:SY 377:RR 256:. 248:, 244:, 232:, 228:, 220:, 216:, 212:, 189:, 185:, 181:, 177:, 173:, 169:, 153:, 149:, 98:, 3037:. 3015:: 2988:. 2966:: 2939:. 2925:: 2898:. 2874:: 2847:. 2827:: 2819:: 2795:. 2775:: 2752:. 2738:: 2711:. 2699:: 2675:. 2663:: 2640:. 2626:: 2599:. 2585:: 2558:. 2536:: 2509:. 2485:: 2477:: 2450:. 2428:: 2401:. 2379:: 2373:9 2352:. 2330:: 2324:8 2303:. 2283:: 2260:. 2240:: 2217:. 2203:: 2197:8 2176:. 2154:: 2127:. 2103:: 2095:: 2068:. 2046:: 2019:. 1997:: 1970:. 1946:: 1938:: 1911:. 1889:: 1862:. 1840:: 1813:. 1791:: 1764:. 1752:: 1729:. 1717:: 1694:. 1680:: 1653:. 1631:: 1604:. 1590:: 1549:. 1527:: 1500:. 1486:: 1459:. 1447:: 1424:. 1400:: 1392:: 1365:. 1341:: 1333:: 1303:. 1291:: 1263:. 1231:: 1209:. 1195:: 1189:7 1168:. 1148:: 1125:. 1105:: 1079:. 1059:: 1051:: 1028:. 1016:: 1008:: 985:. 961:: 953:: 926:. 904:: 874:. 854:: 831:. 811:: 803:: 780:. 766:: 739:. 717:: 690:. 670:: 662:: 639:. 625:: 598:. 584:: 387:N 113:) 106:) 91:) 61:( 38:( 20:)

Index

Trans-activating domain
transcription factor
scaffold domain
proteins
transcription coregulators
Gal4
Gcn4
Gcn4
SP1
c-jun
AP2
Oct-2
NTF-1

KIX domain
Pho4
Gcn4
p53
NFAT
NF-ÎşB
VP16
p53
VP16
MLL
E2A
HSF1
NF-IL6
NFAT1
NF-ÎşB
TAF9

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