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be tracing back which states were used when calculating the maxima (which happens to be the best guess from each day but will not always be). In other words, given the observed activities, the patient was most likely to have been healthy on the first day and also on the second day (despite feeling cold that day), and only to have contracted a fever on the third day.
1409:
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From the table, it can be seen that the patient most likely had a fever on the third day. Furthermore, there exists a sequence of states ending on "fever", of which the probability of producing the given observations is 0.01512. This sequence is precisely (healthy, healthy, fever), which can be found
213:
have become standard terms for the application of dynamic programming algorithms to maximization problems involving probabilities. For example, in statistical parsing a dynamic programming algorithm can be used to discover the single most likely context-free derivation (parse) of a string, which is
1721:
of possible outcomes, the Lazy
Viterbi algorithm maintains a prioritized list of nodes to evaluate in order, and the number of calculations required is typically fewer (and never more) than the ordinary Viterbi algorithm for the same result. However, it is not so easy to parallelize in hardware.
708:
1384:
init = {"Healthy": 0.6, "Fever": 0.4} trans = { "Healthy": {"Healthy": 0.7, "Fever": 0.3}, "Fever": {"Healthy": 0.4, "Fever": 0.6}, } emit = { "Healthy": {"normal": 0.5, "cold": 0.4, "dizzy": 0.1}, "Fever": {"normal": 0.1, "cold": 0.3, "dizzy": 0.6}, }
1486:
The probabilities for each of the following days can be calculated from the previous day directly. For example, the highest chance of being healthy on the second day and reporting to be cold, following reporting being normal on the first day, is the maximum of
167:(speech recognition), the acoustic signal is treated as the observed sequence of events, and a string of text is considered to be the "hidden cause" of the acoustic signal. The Viterbi algorithm finds the most likely string of text given the acoustic signal.
1404:
represent how likely each possible observation (normal, cold, or dizzy) is, given the underlying condition (healthy or fever). A patient who is healthy has a 50% chance of feeling normal; one who has a fever has a 60% chance of feeling dizzy.
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A doctor wishes to determine whether patients are healthy or have a fever. The only information the doctor can obtain is by asking patients how they feel. The patients may report that they either feel normal, dizzy, or cold.
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1400:
represent the change of health condition in the underlying Markov chain. In this example, a patient who is healthy today has only a 30% chance of having a fever tomorrow. The emission probabilities
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represents the doctor's belief about how likely the patient is to be healthy initially. Note that the particular probability distribution used here is not the equilibrium one, which would be
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1217:
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Firstly, the probabilities of being healthy or having a fever on the first day are calculated. The probability that a patient will be healthy on the first day and report feeling normal is
917:{\displaystyle P_{t,s}={\begin{cases}\pi _{s}\cdot b_{s,o_{t}}&{\text{if }}t=0,\\\max _{r\in S}\left(P_{t-1,r}\cdot a_{r,s}\cdot b_{s,o_{t}}\right)&{\text{if }}t>0.\end{cases}}}
329:
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from the doctor. On each day, the chance that a patient tells the doctor "I feel normal", "I feel cold", or "I feel dizzy", depends only on the patient's health condition on that day.
415:
1713:, has been proposed. For many applications of practical interest, under reasonable noise conditions, the lazy decoder (using Lazy Viterbi algorithm) is much faster than the original
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54:
1702:, one can find the subsequence of an observation that matches best (on average) to a given hidden Markov model. This algorithm is proposed by Qi Wang et al. to deal with
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Qi Wang; Lei Wei; Rodney A. Kennedy (2002). "Iterative
Viterbi Decoding, Trellis Shaping, and Multilevel Structure for High-Rate Parity-Concatenated TCM".
2016:. Proc. 2003 Conf. of the North American Chapter of the Association for Computational Linguistics on Human Language Technology (NAACL). pp. 40â47.
1683:(HMM), with a limited number of connections between variables and some type of linear structure among the variables. The general algorithm involves
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A particular patient visits three days in a row, and reports feeling normal on the first day, cold on the second day, and dizzy on the third day.
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1706:. Iterative Viterbi decoding works by iteratively invoking a modified Viterbi algorithm, reestimating the score for a filler until convergence.
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states (healthy, fever) form a hidden Markov model (HMM). From past experience, the probabilities of this model have been estimated as:
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1563:. This suggests it is more likely that the patient was healthy for both of those days, rather than having a fever and recovering.
1219:. If it is known which state transitions have non-zero probability, an improved bound can be found by iterating over only those
331:, the Viterbi algorithm finds the most likely sequence of states that could have produced those observations. At each time step
97:
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prob â new_prob prev â r path â empty array of length T path â the state s with maximum prob
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The first step in the SOVA is the selection of the survivor path, passing through one unique node at each time instant,
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SOVA differs from the classical
Viterbi algorithm in that it uses a modified path metric which takes into account the
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A tutorial for a Hidden Markov Model toolkit (implemented in C) that contains a description of the
Viterbi algorithm
1878:
1699:
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Rabiner LR (February 1989). "A tutorial on hidden Markov models and selected applications in speech recognition".
2194:
Viterbi AJ (April 1967). "Error bounds for convolutional codes and an asymptotically optimum decoding algorithm".
1765:
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1451:. Similarly, the probability that a patient will have a fever on the first day and report feeling normal is
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Feldman J, Abou-Faycal I, Frigo M (2002). "A fast maximum-likelihood decoder for convolutional codes".
1422:
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1366:. There are two states, "healthy" and "fever", but the doctor cannot observe them directly; they are
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obs: sequence of T observations prob â T Ă S matrix of zeroes prev â empty T Ă S matrix
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is the number of edges in the graph, i.e. the number of non-zero entries in the transition matrix.
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Quach, T.; Farooq, M. (1994). "Maximum
Likelihood Track Formation with the Viterbi Algorithm".
218:, where the track is computed that assigns a maximum likelihood to a sequence of observations.
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1717:(using Viterbi algorithm). While the original Viterbi algorithm calculates every node in the
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1828:. Since each node has 2 branches converging at it (with one branch being chosen to form the
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108:âthat results in a sequence of observed events. This is done especially in the context of
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2212:(note: the Viterbi decoding algorithm is described in section IV.) Subscription required.
1679:. The latent variables need, in general, to be connected in a way somewhat similar to a
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Stanke, M.; Keller, O.; Gunduz, I.; Hayes, A.; Waack, S.; Morgenstern, B. (2006).
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17:
2371:, "The sensitivity of the modified Viterbi algorithm to the source statistics,"
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It is believed that the health condition of the patients operates as a discrete
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Efficient parsing of highly ambiguous context-free grammars with bit vectors
93:
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1832:, and the other being discarded), the difference in the branch metrics (or
187:, with at least seven independent discoveries, including those by Viterbi,
1948:
29 Apr 2005, G. David Forney Jr: The
Viterbi Algorithm: A Personal History
1659:) can be used to find the most likely assignment of all or some subset of
1643:. The Viterbi path is essentially the shortest path through this trellis.
2360:, "Experiments in text recognition with the modified Viterbi algorithm,"
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according to the transition probabilities. The transition probabilities
351:, the algorithm solves the subproblem where only the observations up to
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132:
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over noisy digital communication links. It has, however, a history of
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has an implementation as part of its support for stochastic processes
1947:
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The operation of
Viterbi's algorithm can be visualized by means of a
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The rest of the probabilities are summarised in the following table:
136:
2492:
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1407:
612:
be the initial and transition probabilities respectively, and let
2353:(Describes the forward algorithm and Viterbi algorithm for HMMs).
2427:
signal processing framework provides the C++ implementation for
1986:. Proc. 20th Int'l Conf. on Computational Linguistics (COLING).
124:
2283:
Press, WH; Teukolsky, SA; Vetterling, WT; Flannery, BP (2007).
214:
commonly called the "Viterbi parse". Another application is in
2393:
on convolutional coding with viterbi decoding, by Chip
Fleming
2373:
IEEE Transactions on
Pattern Analysis and Machine Intelligence
2362:
IEEE Transactions on
Pattern Analysis and Machine Intelligence
1847:
is accumulated over the entire sliding window (usually equals
1729:
1323:{\displaystyle O(T\times (\left|{S}\right|+\left|{E}\right|))}
128:
119:
The algorithm has found universal application in decoding the
29:
1005:. The Viterbi path can be found by selecting the maximum of
2088:
Proceedings of 33rd IEEE Conference on Decision and Control
2039:"AUGUSTUS: Ab initio prediction of alternative transcripts"
910:
493:, out of all possible sequences of states leading up to it.
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2161:
A fast maximum-likelihood decoder for convolutional codes
1836:) between the chosen and discarded branches indicate the
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Given a hidden Markov model with a set of hidden states
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contains the maximum probability of ending up at state
50:
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2291:(3rd ed.). New York: Cambridge University Press.
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A generalization of the Viterbi algorithm, termed the
179:, who proposed it in 1967 as a decoding algorithm for
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Implementations in Java, F#, Clojure, C# on Wikibooks
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Proceedings IEEE 56th Vehicular Technology Conference
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1804:) is a variant of the classical Viterbi algorithm.
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may be too technical for most readers to understand
2289:Numerical Recipes: The Art of Scientific Computing
1929:"Speaker Diarization: A Review of Recent Research"
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135:modems, satellite, deep-space communications, and
2261:Forney GD (March 1973). "The Viterbi algorithm".
1137:new_prob â prob * trans * emit]
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964:
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1966:. Pearson Education International. p. 246.
1556:{\displaystyle 0.04\times 0.4\times 0.4=0.0064}
1212:{\displaystyle O(T\times \left|{S}\right|^{2})}
528:tracks the previous state that was used before
139:wireless LANs. It is now also commonly used in
2010:A* parsing: fast exact Viterbi parse selection
1691:algorithm (which is the generalization of the
1067:init: initial probabilities of each state
1518:{\displaystyle 0.3\times 0.7\times 0.4=0.084}
8:
2375:, vol. PAMI-2, March 1980, pp. 181â185.
2364:, Vol. PAMI-l, April 1979, pp. 184â193.
2108:: CS1 maint: multiple names: authors list (
2007:Klein, Dan; Manning, Christopher D. (2003).
1764:. Unsourced material may be challenged and
548:in this maximum probability state sequence.
1851:five constraint lengths), to indicate the
324:{\displaystyle o_{0},o_{1},\dots ,o_{T-1}}
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1784:Learn how and when to remove this message
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1412:Graphical representation of the given HMM
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98:maximum a posteriori probability estimate
73:Learn how and when to remove this message
57:, without removing the technical details.
1568:
1167:The time complexity of the algorithm is
1056:Viterbi(states, init, trans, emit, obs)
410:{\displaystyle T\times \left|{S}\right|}
2196:IEEE Transactions on Information Theory
1938:, retrieved 19. August 2010, IEEE TASLP
1920:
2101:
27:Finds likely sequence of hidden states
1957:
1955:
1813:of the input symbols, and produces a
1377:(normal, cold, dizzy) along with the
1025:at the final timestep, and following
705:are given by the recurrence relation
175:The Viterbi algorithm is named after
104:sequence of hidden statesâcalled the
55:make it understandable to non-experts
7:
1762:adding citations to reliable sources
1687:and is substantially similar to the
1263:one can show that the complexity is
1107:// t = 0 has been dealt with already
2514:Eponymous algorithms of mathematics
2500:includes code for Viterbi decoding.
2171:. December 2002. pp. 371â375.
2134:IEEE Transactions on Communications
1071:trans: S Ă S transition matrix
1962:Daniel Jurafsky; James H. Martin.
1869:Expectationâmaximization algorithm
1476:{\displaystyle 0.4\times 0.1=0.04}
25:
2220:. Vol. 1. pp. 371â375.
2090:. Vol. 1. pp. 271â276.
1444:{\displaystyle 0.6\times 0.5=0.3}
2285:"Section 16.2. Viterbi Decoding"
1734:
1394:{'Healthy': 0.57, 'Fever': 0.43}
1075:emit: S Ă O emission matrix
645:be the probability of observing
34:
2431:codes and channel equalization
2169:Vehicular Technology Conference
2049:(Web Server issue): W435âW439.
2519:Error detection and correction
1964:Speech and Language Processing
1855:measure of reliability of the
1709:An alternative algorithm, the
1317:
1314:
1282:
1273:
1259:in the inner loop. Then using
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1177:
1:
1798:soft output Viterbi algorithm
1726:Soft output Viterbi algorithm
1063:states: S hidden states
2236:10.1109/VETECF.2002.1040367
2177:10.1109/VETECF.2002.1040367
197:natural language processing
2545:
1879:Forward-backward algorithm
1859:of the Viterbi algorithm.
1700:iterative Viterbi decoding
1693:forward-backward algorithm
997:{\displaystyle \arg \max }
957:is identical, except that
110:Markov information sources
1698:With an algorithm called
1677:conditional random fields
157:computational linguistics
2429:Forward error correction
2208:10.1109/TIT.1967.1054010
1094:prob = init * emit]
572:{\displaystyle \pi _{s}}
2319:Proceedings of the IEEE
2263:Proceedings of the IEEE
2096:10.1109/CDC.1994.410918
2023:10.3115/1073445.1073461
1993:10.3115/1220355.1220379
1977:Schmid, Helmut (2004).
1927:Xavier Anguera et al.,
950:{\displaystyle Q_{t,s}}
638:{\displaystyle b_{s,o}}
605:{\displaystyle a_{r,s}}
521:{\displaystyle Q_{t,s}}
446:{\displaystyle P_{t,s}}
195:. It was introduced to
2279:Subscription required.
2275:10.1109/PROC.1973.9030
2043:Nucleic Acids Research
1904:Part-of-speech tagging
1817:output indicating the
1810:a priori probabilities
1711:Lazy Viterbi algorithm
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2369:Godfried T. Toussaint
2358:Godfried T. Toussaint
1889:Error-correcting code
1663:in a large number of
1657:max-product algorithm
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970:{\displaystyle \max }
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685:. Then the values of
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381:Two matrices of size
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371:{\displaystyle o_{t}}
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1874:BaumâWelch algorithm
1758:improve this section
1673:Markov random fields
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189:Needleman and Wunsch
114:hidden Markov models
2524:Dynamic programming
2408:(scholarpedia.org).
1909:A* search algorithm
1899:Hidden Markov model
1681:hidden Markov model
1141:new_prob > prob
181:convolutional codes
121:convolutional codes
91:dynamic programming
2481:2012-05-02 at the
2466:Julia (HMMBase.jl)
2454:2014-05-04 at the
2188:General references
2055:10.1093/nar/gkl200
1934:2016-05-12 at the
1689:belief propagation
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193:Wagner and Fischer
185:multiple invention
163:. For example, in
141:speech recognition
131:digital cellular,
96:for obtaining the
2406:Andrew J. Viterbi
2402:Viterbi algorithm
2367:Shinghal, R. and
2356:Shinghal, R. and
2298:978-0-521-88068-8
2245:978-0-7803-7467-6
2146:10.1109/26.975743
2122:Xing E, slide 11.
1884:Forward algorithm
1857:hard bit decision
1821:of the decision.
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1669:Bayesian networks
1653:max-sum algorithm
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1343:{\displaystyle E}
1252:{\displaystyle s}
1232:{\displaystyle r}
1157:path â prev]
1038:{\displaystyle Q}
1018:{\displaystyle P}
977:is replaced with
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698:{\displaystyle P}
678:{\displaystyle s}
658:{\displaystyle o}
541:{\displaystyle s}
486:{\displaystyle t}
466:{\displaystyle s}
417:are constructed:
344:{\displaystyle t}
259:{\displaystyle T}
239:{\displaystyle S}
211:Viterbi algorithm
87:Viterbi algorithm
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2483:Wayback Machine
2456:Wayback Machine
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2413:Implementations
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1894:Viterbi decoder
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1840:in the choice.
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1715:Viterbi decoder
1685:message passing
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2380:External links
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2325:(2): 257â286.
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1774:September 2023
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63:September 2023
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1743:This section
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266:observations
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43:This article
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19:
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2318:
2307:. Retrieved
2303:the original
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1756:Please help
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1586:Observation
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1375:observations
1374:
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1364:Markov chain
1361:
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1166:
1162:
1158:
1155:inclusive do
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1057:
1053:
1045:in reverse.
551:
380:
225:
210:
207:Viterbi path
206:
205:
174:
118:
106:Viterbi path
105:
100:of the most
86:
84:
69:
60:
44:
2419:Mathematica
1853:soft output
1819:reliability
149:diarization
2508:Categories
2309:2011-08-17
1915:References
1704:turbo code
1647:Extensions
1149:t = T - 2
1049:Pseudocode
2327:CiteSeerX
2222:CiteSeerX
2140:: 48â55.
1745:does not
1542:×
1536:×
1504:×
1498:×
1462:×
1430:×
1280:×
1184:×
989:
861:⋅
842:⋅
828:−
807:∈
750:⋅
741:π
665:at state
561:π
392:×
314:−
300:…
222:Algorithm
94:algorithm
2479:Archived
2452:Archived
2391:Tutorial
2349:13618539
2073:16845043
1932:Archived
1863:See also
1849:at least
1613:0.00588
1600:Healthy
1330:, where
1129:state r
1115:state s
1086:state s
1054:function
895:if
779:if
2488:Haskell
2404:by Dr.
2254:9783963
2064:1538822
1766:removed
1751:sources
1719:trellis
1667:, e.g.
1628:0.01512
1354:Example
1133:states
1119:states
1090:states
171:History
133:dial-up
116:(HMM).
49:Please
2498:SFIHMM
2476:Prolog
2461:Java 8
2347:
2329:
2295:
2252:
2242:
2224:
2071:
2061:
1618:Fever
1595:Dizzy
1589:Normal
1551:0.0064
1379:hidden
1368:hidden
1159:return
1102:T - 1
1098:t = 1
191:, and
159:, and
137:802.11
102:likely
2345:S2CID
2250:S2CID
2165:(PDF)
2014:(PDF)
1984:(PDF)
1843:This
1624:0.027
1609:0.084
1513:0.084
1398:trans
1161:path
1077:input
1073:input
1069:input
1065:input
1061:input
89:is a
2471:Perl
2449:Java
2433:here
2425:Susa
2293:ISBN
2240:ISBN
2110:link
2069:PMID
1845:cost
1834:cost
1815:soft
1802:SOVA
1796:The
1749:any
1747:cite
1675:and
1655:(or
1621:0.04
1592:Cold
1533:0.04
1525:and
1471:0.04
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1390:init
1373:The
1143:then
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1113:each
1084:each
902:>
579:and
552:Let
209:and
127:and
125:CDMA
112:and
85:The
2439:C++
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2271:doi
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1163:end
1147:for
1124:for
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1096:for
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992:max
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965:max
800:max
129:GSM
53:to
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2444:C#
2343:.
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Text is available under the Creative Commons Attribution-ShareAlike License. Additional terms may apply.