Knowledge (XXG)

Youden's J statistic

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test is perfect. The index gives equal weight to false positive and false negative values, so all tests with the same value of the index give the same proportion of total misclassified results. While it is possible to obtain a value of less than zero from this equation, e.g. Classification yields only False Positives and False Negatives, a value of less than zero just indicates that the positive and negative labels have been switched. After correcting the labels the result will then be in the 0 through 1 range.
248:(ROC) analysis. The index is defined for all points of an ROC curve, and the maximum value of the index may be used as a criterion for selecting the optimum cut-off point when a diagnostic test gives a numeric rather than a dichotomous result. The index is represented graphically as the height above the chance line, and it is also equivalent to the area under the curve subtended by a single operating point. 237: 215: 232:
in 1884. Its value ranges from -1 through 1 (inclusive), and has a zero value when a diagnostic test gives the same proportion of positive results for groups with and without the disease, i.e the test is useless. A value of 1 indicates that there are no false positives or false negatives, i.e. the
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for the two positive variables are equal as assumed in Fleiss kappa and F-score, that is the number of positive predictions matches the number of positive classes in the dichotomous (two class) case, the different kappa and correlation measure collapse to identity with Youden's J, and recall,
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are totally different measures. F-score, like recall and precision, only considers the so-called positive predictions, with recall being the probability of predicting just the positive class, precision being the probability of a positive prediction being correct, and F-score equating these
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The use of a single index is "not generally to be recommended", but informedness or Youden's index is the probability of an informed decision (as opposed to a random guess) and takes into account all predictions.
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in other contexts (including the multiclass case). Fleiss' kappa, like F-score, assumes that both variables are drawn from the same distribution and thus have the same expected prevalence, while
210:{\displaystyle J={\frac {\text{true positives}}{{\text{true positives}}+{\text{false negatives}}}}+{\frac {\text{true negatives}}{{\text{true negatives}}+{\text{false positives}}}}-1} 56: 240:
Example of a receiver operating characteristic curve. Solid red: ROC curve; Dashed line: Chance level; Vertical line (J) maximum value of Youden's index for the ROC curve
337:, where the component regression coefficients of the Matthews correlation coefficient are deltaP and deltaP' (that is Youden's J or Pierce's I). The main article on 341:
discusses two different generalizations to the multiclass case, one being the analogous geometric mean of Informedness and Markedness. Kappa statistics such as
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effectiveness of predictions in the direction proposed by a rule, theory or classifier. DeltaP is Youden's J used to assess the reverse or
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probabilities under the effective assumption that the positive labels and the positive predictions should have the same distribution and
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Powers, David M W (2011). "Evaluation: From Precision, Recall and F-Score to ROC, Informedness, Markedness & Correlation".
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Youden's index is also known as deltaP' and generalizes from the dichotomous to the multiclass case as informedness.
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in 1950 as a way of summarising the performance of a diagnostic test; however, the formula was earlier published in
295:. Youden's J, Informedness, Recall, Precision and F-score are intrinsically undirectional, aiming to assess the 308: 279: 561:
Perruchet, P.; Peereman, R. (2004). "The exploitation of distributional information in syllable processing".
477:"Optimal cut-point and its corresponding Youden Index to discriminate individuals using pooled blood samples" 350: 642: 330: 229: 613:. Conference of the European Chapter of the Association for Computational Linguistics. pp. 345–355. 259: 353:
based on different assumptions about the marginal or prior distributions, and are increasingly used as
124:{\displaystyle J={\text{sensitivity}}+{\text{specificity}}-1={\text{recall}}_{1}+{\text{recall}}_{0}-1} 283: 267: 334: 588: 498: 430: 404: 365:
assumes that the variables are drawn from distinct distributions and referenced to a model of
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is its generalization to the multiclass case and estimates the probability of an
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Pierce, C.S. (1884). "The numerical measure of the success of predictions".
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10.1002/1097-0142(1950)3:1<32::aid-cncr2820030106>3.0.co;2-3
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Index that describes the performance of a dichotomous diagnostic test
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An unrelated but commonly used combination of basic statistics from
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Everitt B.S. (2002) The Cambridge Dictionary of Statistics. CUP
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Schisterman, E.F.; Perkins, N.J.; Liu, A.; Bondell, H. (2005).
26:) is a single statistic that captures the performance of a 319:;, while correlation and kappa evaluate bidirectionally. 303:
direction, (and generalizes to the multiclass case as
147: 59: 381:precision and F-score are similarly identical with 209: 123: 244:Youden's index is often used in conjunction with 556: 554: 552: 266:, being a (possibly weighted) harmonic mean of 8: 604: 602: 600: 524: 522: 520: 518: 516: 514: 512: 399: 397: 291:, similar to the assumption underlying of 492: 424: 193: 185: 179: 168: 160: 154: 146: 134:with the two right-hand quantities being 109: 104: 94: 89: 74: 66: 58: 531:Journal of Machine Learning Technologies 393: 7: 409:"Index for rating diagnostic tests" 333:of the dichotomous problem and its 307:), matching well human learning of 494:10.1097/01.ede.0000147512.81966.ba 14: 246:receiver operating characteristic 339:Matthews correlation coefficient 323:Matthews correlation coefficient 138:. Thus the expanded formula is: 1: 575:10.1016/s0911-6044(03)00059-9 462:10.1126/science.ns-4.93.453.b 349:are methods for calculating 220:The index was suggested by 136:sensitivity and specificity 659: 638:Statistical classification 609:Powers, David M W (2012). 278:= true positive rate. But 32:(Bookmaker) Informedness 351:inter-rater reliability 611:The Problem with Kappa 331:regression coefficient 241: 211: 125: 315:as we model possible 260:information retrieval 239: 212: 126: 268:recall and precision 145: 57: 20:Youden's J statistic 563:J. Neurolinguistics 242: 207: 121: 373:are independent. 199: 196: 188: 183: 174: 171: 163: 158: 107: 92: 77: 69: 36:informed decision 30:diagnostic test. 650: 623: 622: 606: 595: 585: 579: 578: 558: 547: 546: 526: 507: 506: 496: 472: 466: 465: 445: 439: 438: 428: 401: 357:alternatives to 355:chance corrected 216: 214: 213: 208: 200: 198: 197: 194: 189: 186: 181: 180: 175: 173: 172: 169: 164: 161: 156: 155: 130: 128: 127: 122: 114: 113: 108: 105: 99: 98: 93: 90: 78: 75: 70: 67: 658: 657: 653: 652: 651: 649: 648: 647: 628: 627: 626: 608: 607: 598: 586: 582: 569:(2–3): 97–119. 560: 559: 550: 528: 527: 510: 474: 473: 469: 456:(93): 453–454. 447: 446: 442: 403: 402: 395: 391: 195:false positives 184: 170:false negatives 159: 143: 142: 103: 88: 55: 54: 44: 17: 12: 11: 5: 656: 654: 646: 645: 640: 630: 629: 625: 624: 596: 580: 548: 508: 467: 440: 392: 390: 387: 376:When the true 327:geometric mean 218: 217: 206: 203: 192: 187:true negatives 182:true negatives 178: 167: 162:true positives 157:true positives 153: 150: 132: 131: 120: 117: 112: 102: 97: 87: 84: 81: 73: 65: 62: 43: 40: 24:Youden's index 15: 13: 10: 9: 6: 4: 3: 2: 655: 644: 643:Biostatistics 641: 639: 636: 635: 633: 620: 616: 612: 605: 603: 601: 597: 594: 593:0-521-81099-X 590: 584: 581: 576: 572: 568: 564: 557: 555: 553: 549: 544: 540: 536: 532: 525: 523: 521: 519: 517: 515: 513: 509: 504: 500: 495: 490: 486: 482: 478: 471: 468: 463: 459: 455: 451: 444: 441: 436: 432: 427: 422: 418: 414: 410: 406: 400: 398: 394: 388: 386: 384: 379: 374: 372: 369:that assumes 368: 364: 363:Cohen's kappa 360: 356: 352: 348: 347:Cohen's kappa 344: 343:Fleiss' kappa 340: 336: 332: 328: 324: 320: 318: 314: 313:superstitions 311:; rules and, 310: 306: 302: 298: 294: 293:Fleiss' kappa 290: 285: 281: 277: 273: 269: 265: 261: 256: 252: 249: 247: 238: 234: 231: 227: 223: 204: 201: 190: 176: 165: 151: 148: 141: 140: 139: 137: 118: 115: 110: 100: 95: 85: 82: 79: 71: 63: 60: 53: 52: 51: 50:statistic is 49: 41: 39: 37: 33: 29: 25: 22:(also called 21: 610: 583: 566: 562: 537:(1): 37–63. 534: 530: 487:(1): 73–81. 484: 481:Epidemiology 480: 470: 453: 449: 443: 416: 412: 405:Youden, W.J. 375: 354: 321: 309:associations 257: 253: 250: 243: 230:C. S. Pierce 225: 222:W. J. Youden 219: 133: 47: 45: 31: 23: 19: 18: 378:prevalences 371:prevalences 367:expectation 280:specificity 276:sensitivity 76:specificity 68:sensitivity 28:dichotomous 632:Categories 619:2328/27160 543:2328/27165 389:References 305:Markedness 289:prevalence 42:Definition 419:: 32–35. 317:causation 301:abductive 297:deductive 284:precision 202:− 116:− 80:− 46:Youden's 503:15613948 435:15405679 407:(1950). 383:accuracy 359:accuracy 450:Science 329:of the 325:is the 264:F-score 262:is the 226:Science 591:  501:  433:  413:Cancer 272:recall 270:where 106:recall 91:recall 589:ISBN 499:PMID 431:PMID 345:and 335:dual 282:and 615:hdl 571:doi 539:hdl 489:doi 458:doi 421:doi 228:by 634:: 599:^ 567:17 565:. 551:^ 533:. 511:^ 497:. 485:16 483:. 479:. 452:. 429:. 415:. 411:. 396:^ 385:. 274:= 38:. 621:. 617:: 577:. 573:: 545:. 541:: 535:2 505:. 491:: 464:. 460:: 454:4 437:. 423:: 417:3 205:1 191:+ 177:+ 166:+ 152:= 149:J 119:1 111:0 101:+ 96:1 86:= 83:1 72:+ 64:= 61:J 48:J

Index

dichotomous
informed decision
sensitivity and specificity
W. J. Youden
C. S. Pierce

receiver operating characteristic
information retrieval
F-score
recall and precision
recall
sensitivity
specificity
precision
prevalence
Fleiss' kappa
deductive
abductive
Markedness
associations
superstitions
causation
Matthews correlation coefficient
geometric mean
regression coefficient
dual
Matthews correlation coefficient
Fleiss' kappa
Cohen's kappa
inter-rater reliability

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