Knowledge (XXG)

3H domain

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Weekes D, Miller MD, Krishna SS, McMullan D, McPhillips TM, Acosta C, Canaves JM, Elsliger MA, Floyd R, Grzechnik SK, Jaroszewski L, Klock HE, Koesema E, Kovarik JS, Kreusch A, Morse AT, Quijano K, Spraggon G, van den Bedem H, Wolf G, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA
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Anantharaman V, Koonin EV, Aravind L (April 2001). "Regulatory potential, phyletic distribution and evolution of ancient, intracellular small-molecule-binding domains".
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of de novo NAD synthesis pathway regulators. TM1602 has an N-terminal DNA-binding domain and a C-terminal 3H
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residues. The 3H domain appears to be a smarr molecure-binding domain, based on its occurrence with other
523: 144: 294:"Crystal structure of a transcription regulator (TM1602) from Thermotoga maritima at 2.3 A resolution" 101: 33:
crystal structure of transcriptional regulator (tm1602) from thermotoga maritima at 2.3 a resolution
605: 672: 590: 323: 220: 235:, nicotinic acid, or other substrate/products. The 3H domain has a 2-layer alpha/beta sandwich 667: 315: 273: 135: 657: 305: 265: 127: 236: 216: 595: 458: 382: 212: 188: 177: 692: 528: 93: 327: 57: 610: 533: 518: 478: 413: 232: 228: 123: 347: 69: 677: 662: 585: 575: 555: 550: 545: 508: 463: 438: 423: 418: 403: 652: 647: 642: 627: 615: 600: 540: 513: 503: 498: 493: 483: 453: 448: 433: 428: 408: 398: 637: 560: 473: 468: 200: 184: 319: 277: 269: 97: 28: 343: 192: 64: 310: 293: 81: 76: 155: 351: 339: 117: 52: 355: 219:
domain. The N-terminal domain appears to bind to the NAD
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This article incorporates text from the public domain
231:operon, while the C-terminal 3H domain may bind to 154: 134: 116: 111: 87: 75: 63: 51: 43: 38: 21: 211:is a DNA-binding protein thought to belong to a 367: 8: 374: 360: 352: 108: 27: 309: 248: 18: 7: 14: 1: 112:Available protein structures: 199:regulators from the biotin 715: 337: 172:In molecular biology, the 389: 195:carrying this domain are 107: 26: 223:region and repress the 205:transcription regulator 270:10.1006/jmbi.2001.4508 180:named after its three 209:Thermotoga maritima 311:10.1002/prot.21221 686: 685: 170: 169: 166: 165: 161:structure summary 706: 376: 369: 362: 353: 332: 331: 313: 288: 282: 281: 253: 182:highly conserved 109: 31: 19: 714: 713: 709: 708: 707: 705: 704: 703: 699:Protein domains 689: 688: 687: 682: 385: 383:Protein domains 380: 350: 336: 335: 290: 289: 285: 255: 254: 250: 245: 197:transcriptional 34: 17: 12: 11: 5: 712: 710: 702: 701: 691: 690: 684: 683: 681: 680: 675: 670: 665: 660: 655: 650: 645: 640: 635: 630: 625: 624: 623: 613: 608: 603: 598: 593: 588: 583: 578: 573: 568: 563: 558: 553: 548: 543: 538: 537: 536: 531: 526: 521: 511: 506: 501: 496: 491: 486: 481: 476: 471: 466: 461: 456: 451: 446: 441: 436: 431: 426: 421: 416: 411: 406: 401: 396: 390: 387: 386: 381: 379: 378: 371: 364: 356: 334: 333: 292:(April 2007). 283: 264:(5): 1271–92. 247: 246: 244: 241: 178:protein domain 168: 167: 164: 163: 158: 152: 151: 138: 132: 131: 121: 114: 113: 105: 104: 91: 85: 84: 79: 73: 72: 67: 61: 60: 55: 49: 48: 45: 41: 40: 36: 35: 32: 24: 23: 16:Protein domain 15: 13: 10: 9: 6: 4: 3: 2: 711: 700: 697: 696: 694: 679: 676: 674: 671: 669: 666: 664: 661: 659: 656: 654: 651: 649: 646: 644: 641: 639: 636: 634: 631: 629: 626: 622: 619: 618: 617: 614: 612: 609: 607: 604: 602: 599: 597: 594: 592: 589: 587: 584: 582: 579: 577: 574: 572: 569: 567: 564: 562: 559: 557: 554: 552: 549: 547: 544: 542: 539: 535: 532: 530: 527: 525: 522: 520: 517: 516: 515: 512: 510: 507: 505: 502: 500: 497: 495: 492: 490: 487: 485: 482: 480: 477: 475: 472: 470: 467: 465: 462: 460: 457: 455: 452: 450: 447: 445: 442: 440: 437: 435: 432: 430: 427: 425: 422: 420: 417: 415: 412: 410: 407: 405: 402: 400: 397: 395: 392: 391: 388: 384: 377: 372: 370: 365: 363: 358: 357: 354: 349: 345: 341: 329: 325: 321: 317: 312: 307: 304:(1): 247–52. 303: 299: 295: 287: 284: 279: 275: 271: 267: 263: 259: 252: 249: 242: 240: 238: 234: 230: 226: 222: 218: 214: 210: 206: 202: 198: 194: 190: 186: 183: 179: 175: 162: 159: 157: 153: 150: 146: 142: 139: 137: 133: 129: 125: 122: 119: 115: 110: 106: 103: 99: 95: 92: 90: 86: 83: 80: 78: 74: 71: 68: 66: 62: 59: 56: 54: 50: 46: 42: 37: 30: 25: 20: 393: 301: 297: 286: 261: 258:J. Mol. Biol 257: 251: 233:nicotinamide 229:biosynthesis 224: 208: 207:TM1602 from 203:family. The 173: 171: 678:zinc finger 39:Identifiers 243:References 217:regulatory 191:. Several 124:structures 566:EcoEI_R_C 348:IPR004173 201:repressor 185:histidine 174:3H domain 82:PDOC00449 70:IPR004173 693:Category 344:InterPro 328:42634714 320:17256761 298:Proteins 278:11292341 221:promoter 193:proteins 141:RCSB PDB 65:InterPro 596:Kringle 489:CGI-121 459:BTB/POZ 225:de novo 189:domains 77:PROSITE 58:PF02829 326:  318:  276:  213:family 156:PDBsum 130:  120:  102:SUPFAM 44:Symbol 611:NACHT 534:Pyrin 514:Death 479:Cache 414:ADF-H 324:S2CID 176:is a 98:SCOPe 89:SCOP2 663:WD40 658:TRIO 591:HEAT 586:FYVE 581:FGGY 576:ENTH 556:DHR2 551:DHR1 546:DHHC 529:CARD 509:CVHN 464:BZIP 439:BESS 424:ARID 419:ANTH 404:ACDC 342:and 340:Pfam 316:PMID 274:PMID 237:fold 227:NAD 149:PDBj 145:PDBe 128:ECOD 118:Pfam 94:1j5y 53:Pfam 673:YTH 653:SUN 648:SH3 643:SH2 628:PDZ 621:LOV 616:PAS 606:LRR 601:LIM 571:EF1 541:DEP 524:DED 504:CUT 499:CUB 494:CRM 484:CBS 454:BPS 449:BMC 444:BIR 434:BEN 429:BAR 409:ACT 399:ABM 306:doi 266:doi 262:307 136:PDB 695:: 668:X8 638:PX 633:PH 561:DM 519:DD 474:C2 469:C1 394:3H 346:: 322:. 314:. 302:67 300:. 296:. 272:. 260:. 239:. 147:; 143:; 126:/ 100:/ 96:/ 47:3H 22:3H 375:e 368:t 361:v 330:. 308:: 280:. 268::

Index


Pfam
PF02829
InterPro
IPR004173
PROSITE
PDOC00449
SCOP2
1j5y
SCOPe
SUPFAM
Pfam
structures
ECOD
PDB
RCSB PDB
PDBe
PDBj
PDBsum
structure summary
protein domain
highly conserved
histidine
domains
proteins
transcriptional
repressor
transcription regulator
family
regulatory

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