Knowledge (XXG)

Allophycocyanin

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As mentioned above, in order for APC to be useful in immunoassays it must first be chemically cross-linked to prevent it from dissociating into its component subunits when in common physiological buffers. The conventional method for accomplishing this is through a destructive process wherein the
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Allophycocyanin can be isolated from various species of red or blue-green algae, each producing slightly different forms of the molecule. It is composed of two different subunits (α and β) in which each subunit has one phycocyanobilin (PCB) chromophore. The subunit structure for APC has been
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treated APC trimer is chemically disrupted in 8M urea and then allowed to re-associate through in a physiological buffer. An alternative method can be used which preserves the structural integrity of the APC trimer and allows for a brighter, more stable end-product.
337:, Morseman, John Peter; Moss, Mark Wesley & Allnutt, F C Thomas, "High fluorescent intensity cross-linked allophycocyanin", published 2007-08-14, assigned to Columbia Biosciences Corp. 268:
Papageorgiou GC, Lagoyanni T (September 1983). "Effects of chaotropic electrolytes on the structure and electronic excitation coupling of glutaraldehyde-and diimido ester-cross-linked phycobilisomes".
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Yeh SW, Ong LJ, Clark JH, Glazer AN (January 1987). "Fluorescence properties of allophycocyanin and a crosslinked allophycocyanin trimer".
236: 129: 606: 626: 616: 270: 364: 621: 108:. Allophycocyanin absorbs and emits red light (650 and 660 nm max, respectively), and is readily found in 357: 231:
Many applications and instruments were developed specifically for Allophycocyanin. It is commonly used in
334: 468: 611: 575: 473: 381: 89: 316: 100:. All phycobiliproteins are water-soluble and therefore cannot exist within the membrane like 93: 26: 516: 308: 299: 279: 113: 77: 240: 125: 42: 600: 570: 501: 440: 435: 430: 425: 420: 283: 109: 105: 85: 506: 402: 232: 565: 544: 496: 455: 412: 121: 101: 97: 81: 128:, it is often abbreviated APC. To be effectively used in applications such as 585: 526: 133: 488: 117: 312: 349: 320: 539: 534: 478: 397: 389: 244: 580: 445: 73: 30: 511: 104:, but aggregate, forming clusters that adhere to the membrane called 120:. Phycobilin pigments have fluorescent properties that are used in 15: 353: 16: 249:
Time Resolved-Fluorescence Resonance Energy Transfer (TR-FRET)
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Biochimica et Biophysica Acta (BBA) - Bioenergetics
243:, and High Throughput Screening as an acceptor for 149:. The molecular weight of APC is 105,000 daltons. 464:1,7-Bis(4-hydroxyphenyl)-1,4,6-heptatrien-3-one 365: 8: 136:, APC needs to be chemically cross-linked. 372: 358: 350: 156: 260: 132:, High-Throughput Screening (HTS) and 7: 41:("other algal blue protein"; from 14: 1: 284:10.1016/0005-2728(83)90091-9 20:Allophycocyanin dodekamer, 645: 168:Additional Absorption peak 140:Structural characteristics 76:from the light-harvesting 66: 57: 48: 153:Spectral characteristics 607:Photosynthetic pigments 627:Cyanobacteria proteins 313:10.1002/cyto.990080113 192:Extinction Coefficient 35: 335:US patent 7256050 72:meaning "blue") is a 22:Gloeobacter violaceus 19: 617:Fluorescent proteins 469:Bisdemethoxycurcumin 63:meaning “alga”, and 80:family, along with 622:Bacterial proteins 576:Phycoerythrocyanin 474:Desmethoxycurcumin 160:Absorption maximum 145:determined as (αβ) 90:phycoerythrocyanin 36: 594: 593: 517:Condensed tannins 215: 214: 94:accessory pigment 54:meaning "other", 634: 374: 367: 360: 351: 344: 343: 342: 338: 331: 325: 324: 294: 288: 287: 265: 218:Cross-linked APC 176:Emission maximum 157: 114:blue-green algae 78:phycobiliprotein 69: 68: 60: 59: 51: 50: 33: 644: 643: 637: 636: 635: 633: 632: 631: 597: 596: 595: 590: 561:Allophycocyanin 549: 521: 483: 450: 407: 384: 378: 348: 347: 340: 333: 332: 328: 296: 295: 291: 267: 266: 262: 257: 229: 155: 148: 142: 39:Allophycocyanin 25: 12: 11: 5: 642: 641: 638: 630: 629: 624: 619: 614: 609: 599: 598: 592: 591: 589: 588: 583: 578: 573: 568: 563: 557: 555: 551: 550: 548: 547: 542: 537: 531: 529: 523: 522: 520: 519: 514: 509: 504: 502:Anthocyanidins 499: 493: 491: 485: 484: 482: 481: 476: 471: 466: 460: 458: 452: 451: 449: 448: 443: 438: 433: 428: 423: 417: 415: 409: 408: 406: 405: 400: 394: 392: 386: 385: 382:plant pigments 379: 377: 376: 369: 362: 354: 346: 345: 326: 289: 259: 258: 256: 253: 241:flow cytometry 228: 225: 213: 212: 209: 205: 204: 201: 197: 196: 193: 189: 188: 185: 181: 180: 179:657.5 nm 177: 173: 172: 169: 165: 164: 161: 154: 151: 146: 141: 138: 126:flow cytometry 106:phycobilisomes 13: 10: 9: 6: 4: 3: 2: 640: 639: 628: 625: 623: 620: 618: 615: 613: 610: 608: 605: 604: 602: 587: 584: 582: 579: 577: 574: 572: 571:Phycoerythrin 569: 567: 564: 562: 559: 558: 556: 552: 546: 543: 541: 538: 536: 533: 532: 530: 528: 524: 518: 515: 513: 510: 508: 507:Anthoxanthins 505: 503: 500: 498: 495: 494: 492: 490: 486: 480: 477: 475: 472: 470: 467: 465: 462: 461: 459: 457: 453: 447: 444: 442: 441:Chlorophyll f 439: 437: 436:Chlorophyll d 434: 432: 431:Chlorophyll c 429: 427: 426:Chlorophyll b 424: 422: 421:Chlorophyll a 419: 418: 416: 414: 410: 404: 401: 399: 396: 395: 393: 391: 387: 383: 375: 370: 368: 363: 361: 356: 355: 352: 336: 330: 327: 322: 318: 314: 310: 306: 302: 301: 293: 290: 285: 281: 278:(3): 323–32. 277: 273: 272: 264: 261: 254: 252: 250: 246: 242: 238: 234: 226: 224: 220: 219: 211:1.6 x 10 Mcm 210: 207: 206: 202: 200:Quantum Yield 199: 198: 194: 191: 190: 186: 183: 182: 178: 175: 174: 170: 167: 166: 162: 159: 158: 152: 150: 139: 137: 135: 131: 127: 123: 119: 115: 112:(also called 111: 110:Cyanobacteria 107: 103: 99: 95: 91: 87: 86:phycoerythrin 83: 79: 75: 71: 62: 53: 44: 40: 32: 28: 23: 18: 560: 545:Xanthophylls 497:Anthocyanins 456:Curcuminoids 403:Betaxanthins 329: 304: 298: 292: 275: 269: 263: 233:immunoassays 230: 227:Applications 221: 217: 216: 195:700,000 Mcm 187:5.5 nm 184:Stokes Shift 171:625 nm 163:652 nm 143: 64: 55: 46: 38: 37: 21: 586:Xanthonoids 566:Phycocyanin 527:Carotenoids 413:Chlorophyll 398:Betacyanins 307:(1): 91–5. 122:immunoassay 102:carotenoids 98:chlorophyll 92:. It is an 82:phycocyanin 601:Categories 489:Flavonoids 255:References 208:Brightness 134:microscopy 612:Red algae 540:Retinoids 535:Carotenes 390:Betalains 380:Types of 300:Cytometry 124:kits. In 118:red algae 581:Quinones 479:Curcumin 251:assays. 245:Europium 235:such as 70:(kyanos) 61:(phykos) 34:​) 512:Flavans 446:Chlorin 321:3100257 116:), and 74:protein 52:(allos) 341:  319:  67:κυανός 554:Other 203:0.68 58:φύκος 49:ἄλλος 43:Greek 317:PMID 247:via 237:FACS 130:FACS 88:and 31:2vjt 309:doi 280:doi 276:724 96:to 27:PDB 603:: 315:. 303:. 274:. 239:, 84:, 45:: 29:: 373:e 366:t 359:v 323:. 311:: 305:8 286:. 282:: 147:3 24:(

Index


PDB
2vjt
Greek
protein
phycobiliprotein
phycocyanin
phycoerythrin
phycoerythrocyanin
accessory pigment
chlorophyll
carotenoids
phycobilisomes
Cyanobacteria
blue-green algae
red algae
immunoassay
flow cytometry
FACS
microscopy
immunoassays
FACS
flow cytometry
Europium
Time Resolved-Fluorescence Resonance Energy Transfer (TR-FRET)
Biochimica et Biophysica Acta (BBA) - Bioenergetics
doi
10.1016/0005-2728(83)90091-9
Cytometry
doi

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