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Porcine reproductive and respiratory syndrome virus 2

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methodology, PRRSV type 2 was sub-divided into 9 lineages, which are present with different prevalence across the world. Despite type 2 PRRSV being named the North American PRRSV, there are two lineages that are restricted to Asia. The other lineages had what is assumed introductions into other geographic locations such as Thailand, Canada, China and Italy. Within the U.S., the prevalence of different lineages of PRRSV change over time. It is presumed that Type 2 PRRSV was first seen in Canada after analyzing serological evidence. By 2010, of the top ten swine production states in the United States, viruses in 3 of the 9 major lineages were present. Two of the three lineages were considered major lineages because of their sample size. By 2019, at least 5 different lineages circulate in a single U.S. region, and certain lineages display complex intra-lineage variability, which has been sometimes referred to as sub-lineages. The occurrence of specific lineages in the United States are not homogeneous, certain lineages are more prevalent in specific parts of the country.
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ORF2a, 3, 4, 5, encode glycoprotein 2,2a, 3, 4, and 5. ORF2b encodes the envelope protein. There is a newly discovered protein encoded in ORF5a that overlaps ORF5. ORF6 encodes the membrane protein. The nucleocapsid (N) protein is encoded by ORF7. The N protein is composed of 123 amino acids, produces an immune response within the cell, and is thought to be multifunctional. This protein also has five antigenic regions. A cryptic nuclear localization signal (NLS), a functional  nuclear localization signal (NLS-2), and a nucleolar localization signal (NoLS) are all located on this protein as well.
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has been shown that mutations within the leader transcription regulating sequence (TRS) of the type 2 PRRSV genome may inhibit proper sgmRNA translation. Intact leader TRS is required for proper sgmRNA transcription. PRSSV uses different non-conical (non-structural) body translation regulating sequences (TRS-B) to produce different sg mRNA species. Different strains have and use different TRS-Bs depending on genotype changes that have occurred. The 3' terminal C5 and C6 are conserved within different species' TRS-Bs.
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KB-driven inflammatory cytokine response. This response activates the DHX36-MyD88-P65 signaling cascade. When researchers knocked out DHX36, the activation of NF-ÎșB signaling by PRSSV and nucleocapsid (N) protein was inhibited. Because of this experiment it is now known that type 2 PRSSV using its N protein to induce the NF-ÎșB response. Type 2 PRSSV is able to induce this response through the interaction between the N protein and DHX36. This interaction is made possible through the N-terminal of the DHX36.
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who have been infected. Without a strong neutralizing vaccination, the host cells are able to attach strongly and then with weak neutralizing effects, end up getting infected easier. The live attenuated vaccine works through an unknown mechanism and only helps clinical symptoms; it does not prevent infection. It is thought that the live attenuated vaccination may also revert to the virulent form of the virus. These two vaccinations are currently not effective.
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kDa protein out of solution. However, this does not completely block attachment to the PAMs. It has been shown previously that heparin can reduce infection of Marc-145 cells (a derived cell line from the African green monkey kidney cell line). It has now been shown that binding of type 2 PRRSV binds to heparin sulfate
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PRSSV is assumed to transcribe like other nidoviruses that transcribe in a discontinuous fashion. The structural proteins are translated from the 5' ends of the sub genomic (sg) mRNA 2 to 7. The 5' UTR in PRRSV consists of its 5' leader sequence. The PRSSV generates a 3' coterminal set of sgmRNAs. It
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Type 2 PRRSV is an enveloped virus with a non-isometric nucleocapsid core. The Type 2 PRRSV genome has 10 open reading frames (ORFs) present. There are two large ORFs (ORF1a and ORF1b) that encode non-structural proteins. The remaining eight ORFs create the six main structural proteins for the virus.
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Currently, inactivated and live attenuated viruses are used to try to eliminate porcine reproductive and respiratory syndrome (PRRS). It has been found that the inactivated vaccination only induces weak neutralizing antibodies against PRRS. This type of response can create a worse infection for those
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Within the swine industry, porcine reproductive and respiratory syndrome causes interstitial pneumonia of grown swine and fetal death. Early gestation infection of a maternal swine can lead to embryonic infection. During mid-gestation, the fetuses are protected as the virus can not pass the placenta.
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patterns. These are characterized by displaying a cut pattern of three different enzymes (MluI, HincII and SacII) in the ORF5 portion of the PRRSV genome. Common RFLP types for are 1-7-4, 1-8-4, 2-5-2, among thousands of others. Criticism to this way of classifying the virus range from the multitude
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ORF1a and ORF1b are translated to create two large proteins. Processing of these precursor proteins creates at least 14 nonstructural proteins. The processing is regulated by four main viral proteases. Most of the nonstructural protein (NSPs) assemble and create a complex called the replication and
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It has been found that a 210-kDa membrane protein expressed on porcine alveolar macrophages (PAMS) allows PRRSV to attach to the membrane. The exact nature of this protein has not yet been identified. Infection by PRRSV can be completely blocked using monoclonal antibodies that precipitate the 210-
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Since the 1987 classification of type 2 (North American-like) PRRSV, the virus has greatly diversified. There are three main epidemiological events that have occurred. There has been the introduction of the MN184-related cluster, acute PRRS/abortion storm, and highly pathogenic Chinese strains. The
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At the end of replication, the nucleocapsid proteins surround the newly made genome. The new nucleocapsid complex buds from the smooth endoplasmic reticulum and the golgi complex. Through this process the new capsid obtains the required six viral envelope proteins. The new virions then go into the
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The type 2 PRRSV infection induces the unfolded protein response (UPR) within the cell, also known as the endoplasmic reticulum (ER) stress response. This response triggers the function of c-Jun N-terminal kinases (JNK). The activation of JNK leads to p53 and Akt activation which in turn lead to
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It has been suggested that despite the normal anti-viral role Protein Kinase R (PKR) plays in cells, type 2 PRRSV uses PKR as a pro-viral kinase within the cell. When PKR was knocked out in Marc-145 cells, Type-2 PRRSV strain 23983 replication decreased. Therefore, it is assumed that PKR plays a
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One main way that Type 2 PRSSV modulates the host cell is through the activation of the inflammatory response. This pro-inflammatory response in host cells oftentimes most visibly results in interstitial pneumonia of the infected swine. It has now been found that type 2 PRRSV increases the NF -
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Zheng, Haihong; Zhang, Keyu; Zhu, Xing-Quan; Liu, Changlong; Lu, Jiaqi; Gao, Fei; Zhou, Yan; Zheng, Hao; Lin, Tao (2014-08-01). "Genetic manipulation of a transcription-regulating sequence of porcine reproductive and respiratory syndrome virus reveals key nucleotides determining its activity".
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The genetic diversity of Type 2 PRRSV continues to grow. Canada and the United States have shown the highest degree of continued diversity. In Canada, the diversity is more localized in certain areas and thought to be due to the introduction of vaccination diversity. The United States genetic
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Because of those limitations, PRRSV type 2 has been recently classified according to phylogenetic characteristics of the ORF5 portion of the viral genome, which aggregates isolates into phylogenetic lineages based on the ancestral relationships and genetic distance among isolates. Using this
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of possible combinations of different cut pattern of the three enzymes (leading to tens of thousands of different PRRSV RFLP patterns, with unknown epidemiological significance) to the quick change in RFLP types of a single virus in as few as 10 animal passages.
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Wang, Xiuqing; Zhang, Hanmo; Abel, Alex M.; Nelson, Eric (2016-02-01). "Protein kinase R (PKR) plays a pro-viral role in porcine reproductive and respiratory syndrome virus (PRRSV) replication by modulating viral gene transcription".
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diversity has increased in all geographic areas. However, Mexico contains the greatest number of genetic outliers. Researchers believe this is due to multiple reintroductions of the virus to the areas.
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on the PAMs is vital to entry. PRRSV then binds to CD169 on the PAM. This binding activates receptor-mediated clathrin-dependent endocytosis. The genome enters the cytoplasm using a reaction by CD163.
947:"Recognition of Highly Diverse Type-1 and -2 Porcine Reproductive and Respiratory Syndrome Viruses (PRRSVs) by T-Lymphocytes Induced in Pigs after Experimental Infection with a Type-2 PRRSV Strain" 1430:"DExD/H-Box Helicase 36 Signaling via Myeloid Differentiation Primary Response Gene 88 Contributes to NF-ÎșB Activation to Type 2 Porcine Reproductive and Respiratory Syndrome Virus Infection" 304:
There have been many new attempts to find effective vaccinations. Researchers are currently trying to identify neutralizing antibodies that will provide true immunity against type 2 PRRSV.
790:"Instability of the Restriction Fragment Length Polymorphism Pattern of Open Reading Frame 5 of Porcine Reproductive and Respiratory Syndrome Virus during Sequential Pig-to-Pig Passages" 339:
Despite the genetic variation that occurs in type 2 PRRSV, a conserved stem loop in the genome has been identified. This is believed to play a role in viral replication and translation.
219:(PRRSV). The two types of PRRSV are distinguished by which genomic cluster they are associated with. Type 1 is associated with a LV cluster. Type 2 is associated with a VR2332 cluster. 216: 1231:"Replacement of the heterologous 5â€Č untranslated region allows preservation of the fully functional activities of type 2 porcine reproductive and respiratory syndrome virus" 351:
transcription complex (RTC). The complexes then accumulate in the endoplasmic reticulum double membrane vesicles. These complexes direct both replication and transcription.
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Chung, Chungwon J.; Cha, Sang-Ho; Grimm, Amanda L.; Chung, Grace; Gibson, Kathleen A.; Yoon, Kyoung-Jin; Parish, Steven M.; Ho, Chak-Sum; Lee, Stephen S. (2016-10-31).
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Shi, Mang; Lam, Tommy Tsan-Yuk; Hon, Chung-Chau; Murtaugh, Michael P.; Davies, Peter R.; Hui, Raymond Kin-Hei; Li, Jun; Wong, Lina Tik-Wim; Yip, Chi-Wai (2010-09-01).
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tropism for cells like macrophages or monocytes. PRRSV can then infect a subpopulation of macrophages. These can then be identified by the expression of sialoadhesin
628:"Maternal and fetal predictors of fetal viral load and death in third trimester, type 2 porcine reproductive and respiratory syndrome virus infected pregnant gilts" 1171:"Involvement of the matrix protein in attachment of porcine reproductive and respiratory syndrome virus to a heparinlike receptor on porcine alveolar macrophages" 1014:"The N-N non-covalent domain of the nucleocapsid protein of type 2 porcine reproductive and respiratory syndrome virus enhances induction of IL-10 expression" 1118:
Jusa, E. R.; Inaba, Y.; Kouno, M.; Hirose, O. (May 1997). "Effect of heparin on infection of cells by porcine reproductive and respiratory syndrome virus".
839:"Phylogeny-based evolutionary, demographical, and geographical dissection of North American type 2 porcine reproductive and respiratory syndrome viruses" 687:"Analysis of porcine reproductive and respiratory syndrome virus attachment and internalization: distinctive roles for heparan sulphate and sialoadhesin" 567:"Phylogeny-Based Evolutionary, Demographical, and Geographical Dissection of North American Type 2 Porcine Reproductive and Respiratory Syndrome Viruses" 367:
apoptosis of the cell. It is thought that this apoptosis of the host cell plays a significant role in the pathogenesis of the type 2 PRRSV infection.
1389:"Involvement of unfolded protein response, p53 and Akt in modulation of porcine reproductive and respiratory syndrome virus-mediated JNK activation" 271: 242:
However, in late state gestation transplacental infection to and from fetuses can occur and large scale reproductive failure may occur.
1063:"Identification of a Putative Receptor for Porcine Reproductive and Respiratory Syndrome Virus on Porcine Alveolar Macrophages" 45: 1229:
Gao, Fei; Yao, Huochun; Lu, Jiaqi; Wei, Zuzhang; Zheng, Haihong; Zhuang, Jinshan; Tong, Guangzhi; Yuan, Shishan (2013).
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Jing, Huiyuan; Zhou, Yanrong; Fang, Liurong; Ding, Zhen; Wang, Dang; Ke, Wenting; Chen, Huanchun; Xiao, Shaobo (2017).
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Shi M, Lam TT, Hon CC, Murtaugh MP, Davies PR, Hui RK, Li J, Wong LT, Yip CW, Jiang JW, Leung FC (Sep 2010).
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Paploski IA, Corzo C, Rovira A, Murtaugh MP, Sanhueza JM, Vilalta C, Schroeder DC, VanderWaal K (Nov 2019).
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Huo, Yazhen; Fan, Lihong; Yin, Shutao; Dong, Yinhui; Guo, Xiao; Yang, Hanchun; Hu, Hongbo (2013).
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Brar, Manreetpal Singh; Shi, Mang; Murtaugh, Michael P.; Leung, Frederick Chi-Ching (2015).
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Duan, Xiaobo; Nauwynck, Hans J.; Favoreel, Herman W.; Pensaert, Maurice B. (1998-05-01).
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Besides these hints, the exact way in which type 2 PRRSV translates remains a mystery.
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Liu, Xing; Fan, Baochao; Bai, Juan; Wang, Haiyan; Li, Yufeng; Jiang, Ping (2015).
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Delputte, P. L.; Vanderheijden, N.; Nauwynck, H. J.; Pensaert, M. B. (May 2002).
971: 1405: 1388: 1247: 1131: 623: 230: 118: 1349: 1297: 644: 525: 510:"Overview: Replication of porcine reproductive and respiratory syndrome virus" 17: 1455: 1446: 1357: 1305: 1194: 1139: 1086: 980: 755: 653: 590: 533: 70: 1473: 1414: 1365: 1313: 1266: 1212: 1039: 998: 918: 872: 823: 774: 712: 671: 608: 551: 473: 1147: 1104: 703: 686: 1030: 1013: 909: 892: 854: 622:
Ladinig, Andrea; Ashley, Carolyn; Detmer, Susan E.; Wilkinson, Jamie M.;
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PRRSV type 2 has been historically classified according to
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Delputte, P. L.; Costers, S.; Nauwynck, H. J. (2005).
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porcine reproductive and respiratory syndrome viruses
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porcine reproductive and respiratory syndrome virus 2
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Porcine reproductive and respiratory syndrome virus 2
891:Brar MS, Shi M, Murtaugh MP, Leung FC (Jul 2015). 626:; Plastow, Graham; Harding, John CS (2015-09-25). 347:pro-viral role by affecting PRRSV transcription. 886: 884: 882: 272:RFLP (restriction fragment length polymorphism) 732: 730: 728: 726: 724: 722: 283:history of their incidences remain a mystery. 1278: 1276: 940: 938: 936: 8: 1224: 1222: 508:Yun, Sang-Im; Lee, Young-Min (2013-12-01). 441: 439: 437: 211:. Members of the species are also known as 503: 501: 499: 497: 495: 493: 491: 29: 1463: 1445: 1404: 1256: 1246: 1202: 1094: 1029: 988: 970: 908: 862: 813: 764: 754: 702: 661: 643: 598: 541: 463: 1120:American Journal of Veterinary Research 385: 7: 394:"Taxonomy browser (Betaarterivirus)" 363:extracellular space via exocytosis. 215:. Member viruses are a type of the 788:Cha S, Chang C, Yoon K (Oct 2004). 25: 806:10.1128/JCM.42.10.4462-4467.2004 794:Journal of Clinical Microbiology 44: 1187:10.1128/JVI.76.9.4312-4320.2002 1079:10.1128/JVI.72.5.4520-4523.1998 897:The Journal of General Virology 1: 418:"Betaarterivirus ~ ViralZone" 335:Replication and transcription 972:10.1371/journal.pone.0165450 371:Modulation of host processes 1406:10.1016/j.virol.2013.06.015 1248:10.1016/j.virol.2012.12.013 1132:10.2460/ajvr.1997.58.05.488 1018:Journal of General Virology 691:Journal of General Virology 452:Journal of General Virology 205:positive-strand RNA viruses 1515: 250:As a member of the family 1350:10.1007/s00705-015-2671-0 1298:10.1007/s00705-014-2018-2 743:Frontiers in Microbiology 645:10.1186/s13567-015-0251-7 526:10.1007/s12275-013-3431-z 183: 176: 39: 32: 1447:10.3389/fimmu.2017.01365 756:10.3389/fmicb.2019.02486 317:Genome replication cycle 1434:Frontiers in Immunology 514:Journal of Microbiology 196:Betaarterivirus suid 2 169:Betaarterivirus suid 2 34:Betaarterivirus suid 2 704:10.1099/vir.0.80675-0 228:family and the order 1338:Archives of Virology 1286:Archives of Virology 1031:10.1099/vir.0.000061 910:10.1099/vir.0.000104 855:10.1128/JVI.02551-09 583:10.1128/jvi.02551-09 465:10.1099/vir.0.000104 422:viralzone.expasy.org 398:www.ncbi.nlm.nih.gov 358:Assembly and release 322:Attachment and entry 266:Viral classification 41:Virus classification 1175:Journal of Virology 1067:Journal of Virology 963:2016PLoSO..1165450C 843:Journal of Virology 632:Veterinary Research 571:Journal of Virology 236:open reading frames 329:glycosaminoglycans 849:(17): 8700–8711. 800:(10): 4462–4467. 577:(17): 8700–8711. 287:Genomic diversity 192: 191: 16:(Redirected from 1506: 1478: 1477: 1467: 1449: 1425: 1419: 1418: 1408: 1399:(1–2): 233–240. 1384: 1378: 1377: 1332: 1326: 1325: 1292:(8): 1927–1940. 1280: 1271: 1270: 1260: 1250: 1226: 1217: 1216: 1206: 1181:(9): 4312–4320. 1166: 1160: 1159: 1115: 1109: 1108: 1098: 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254:, PRRSV has an 248: 172: 144:Betaarterivirus 108:Pisoniviricetes 43: 28: 23: 22: 15: 12: 11: 5: 1512: 1510: 1502: 1501: 1499:Swine diseases 1496: 1486: 1485: 1480: 1479: 1420: 1379: 1344:(2): 327–333. 1327: 1272: 1218: 1161: 1126:(5): 488–491. 1110: 1053: 1004: 932: 878: 829: 780: 718: 677: 614: 557: 520:(6): 711–723. 487: 433: 409: 384: 383: 381: 378: 372: 369: 359: 356: 336: 333: 323: 320: 318: 315: 309: 306: 297: 294: 288: 285: 267: 264: 247: 244: 190: 189: 188: 187: 181: 180: 174: 173: 166: 164: 160: 159: 156:Ampobartevirus 152: 148: 147: 140: 136: 135: 128: 124: 123: 116: 112: 111: 104: 100: 99: 92: 88: 87: 80: 76: 75: 68: 61: 60: 55: 51: 50: 37: 36: 26: 24: 18:Ampobartevirus 14: 13: 10: 9: 6: 4: 3: 2: 1511: 1500: 1497: 1495: 1494:Arteriviridae 1492: 1491: 1489: 1475: 1471: 1466: 1461: 1457: 1453: 1448: 1443: 1439: 1435: 1431: 1424: 1421: 1416: 1412: 1407: 1402: 1398: 1394: 1390: 1383: 1380: 1375: 1371: 1367: 1363: 1359: 1355: 1351: 1347: 1343: 1339: 1331: 1328: 1323: 1319: 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Retrieved 397: 388: 374: 365: 361: 353: 349: 345: 341: 338: 325: 311: 303: 299: 296:Vaccinations 290: 281: 277: 269: 259: 255: 251: 249: 240: 229: 223: 221: 212: 195: 194: 193: 168: 167: 155: 143: 131: 119: 107: 96:Pisuviricota 95: 83: 71: 64: 54:(unranked): 33: 1241:(1): 1–12. 231:Nidovirales 120:Nidovirales 1488:Categories 638:(1): 107. 427:2021-06-17 403:2021-06-17 380:References 151:Subgenus: 1456:1664-3224 1358:0304-8608 1306:0304-8608 1195:0022-538X 1140:0002-9645 1087:0022-538X 981:1932-6203 654:1297-9716 591:0022-538X 534:1225-8873 308:Structure 201:enveloped 163:Species: 79:Kingdom: 72:Riboviria 1474:29123520 1440:: 1365. 1415:23850458 1393:Virology 1374:17220420 1366:26547579 1314:24562427 1267:23453581 1235:Virology 1213:11932397 1156:26302574 1048:25114252 1040:25614594 999:27798650 951:PLOS ONE 927:21578823 919:25711962 873:20554771 824:15472294 775:31736919 713:15831956 672:26407558 609:20554771 552:24385346 482:21578823 474:25711962 260:in vitro 178:Synonyms 127:Family: 91:Phylum: 1465:5662876 1322:9772334 1258:7111940 1148:9140556 1105:9557752 990:5087905 959:Bibcode 864:2919017 766:6839445 663:4582889 600:2919017 543:7091224 256:in vivo 246:Tropism 139:Genus: 115:Order: 103:Class: 1472:  1462:  1454:  1413:  1372:  1364:  1356:  1320:  1312:  1304:  1265:  1255:  1211:  1204:155060 1201:  1193:  1154:  1146:  1138:  1103:  1096:109698 1093:  1085:  1046:  1038:  997:  987:  979:  925:  917:  871:  861:  822:  815:522335 812:  773:  763:  711:  670:  660:  652:  607:  597:  589:  550:  540:  532:  480:  472:  1370:S2CID 1318:S2CID 1152:S2CID 1044:S2CID 923:S2CID 478:S2CID 65:Realm 58:Virus 1470:PMID 1452:ISSN 1411:PMID 1362:PMID 1354:ISSN 1310:PMID 1302:ISSN 1263:PMID 1209:PMID 1191:ISSN 1144:PMID 1136:ISSN 1101:PMID 1083:ISSN 1036:PMID 995:PMID 977:ISSN 915:PMID 869:PMID 820:PMID 771:PMID 709:PMID 668:PMID 650:ISSN 605:PMID 587:ISSN 548:PMID 530:ISSN 470:PMID 258:and 1460:PMC 1442:doi 1401:doi 1397:444 1346:doi 1342:161 1294:doi 1290:159 1253:PMC 1243:doi 1239:439 1199:PMC 1183:doi 1128:doi 1091:PMC 1075:doi 1026:doi 985:PMC 967:doi 905:doi 859:PMC 851:doi 810:PMC 802:doi 761:PMC 751:doi 699:doi 658:PMC 640:doi 595:PMC 579:doi 538:PMC 522:doi 460:doi 1490:: 1468:. 1458:. 1450:. 1436:. 1432:. 1409:. 1395:. 1391:. 1368:. 1360:. 1352:. 1340:. 1316:. 1308:. 1300:. 1288:. 1275:^ 1261:. 1251:. 1237:. 1233:. 1221:^ 1207:. 1197:. 1189:. 1179:76 1177:. 1173:. 1150:. 1142:. 1134:. 1124:58 1122:. 1099:. 1089:. 1081:. 1071:72 1069:. 1065:. 1042:. 1034:. 1022:96 1020:. 1016:. 993:. 983:. 975:. 965:. 955:11 953:. 949:. 935:^ 921:. 913:. 901:96 899:. 895:. 881:^ 867:. 857:. 847:84 845:. 841:. 818:. 808:. 798:42 796:. 792:. 769:. 759:. 745:. 741:. 721:^ 707:. 695:86 693:. 689:. 666:. 656:. 648:. 636:46 634:. 630:. 603:. 593:. 585:. 575:84 573:. 569:. 546:. 536:. 528:. 518:51 516:. 512:. 490:^ 476:. 468:. 456:96 454:. 450:. 436:^ 420:. 396:. 203:, 67:: 1476:. 1444:: 1438:8 1417:. 1403:: 1376:. 1348:: 1324:. 1296:: 1269:. 1245:: 1215:. 1185:: 1158:. 1130:: 1107:. 1077:: 1050:. 1028:: 1001:. 969:: 961:: 929:. 907:: 875:. 853:: 826:. 804:: 777:. 753:: 747:1 715:. 701:: 674:. 642:: 611:. 581:: 554:. 524:: 484:. 462:: 430:. 406:. 20:)

Index

Ampobartevirus
Virus classification
Edit this classification
Virus
Riboviria
Orthornavirae
Pisuviricota
Pisoniviricetes
Nidovirales
Arteriviridae
Betaarterivirus
Ampobartevirus
Synonyms
enveloped
positive-strand RNA viruses
domestic pigs
porcine reproductive and respiratory syndrome viruses
Arteriviridae
Nidovirales
open reading frames
RFLP (restriction fragment length polymorphism)
glycosaminoglycans
"Taxonomy browser (Betaarterivirus)"
"Betaarterivirus ~ ViralZone"



"Evolutionary diversification of type 2 porcine reproductive and respiratory syndrome virus"
doi
10.1099/vir.0.000104

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