Knowledge (XXG)

Analytical ultracentrifugation

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light-sensitive diode array or by film in the older machines. The operator can thus observe the change of sample concentration versus the axis of the rotation profile with time as a result of the applied centrifugal field. With modern instrumentation, these observations are electronically digitized and stored for further mathematical analysis.
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to 10 GDa can be covered. Sedimentation velocity experiments can also be used to study reversible chemical equilibria between macromolecular species, by either monitoring the number and molar mass of macromolecular complexes, by gaining information about the complex composition from multi-signal
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An analytical ultracentrifuge has a light source and optical detectors. To allow the light to pass through the analyte during the ultracentrifuge run, specialized cells are required which have to meet high optical standards as well as to resist the centrifugal forces. Each cell consists of a housing,
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Spinco Model E Analytical Ultracentrifuge. This is an early instrument, dating to the 1950s. The operator is seated in front of the sample chamber, with his left hand touching the rotor. In operation, the chamber would be sealed behind an armored shroud and pumped down to vacuum. The shroud has
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In an analytical ultracentrifuge (commonly abbreviated as AUC), a sample’s sedimentation profile is monitored in real time by an optical detection system. The sample is detected via ultraviolet light absorption and/or interference optical refractive index sensitive system, monitored by
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Sedimentation velocity experiments render the shape and molar mass of the analytes, as well as their size-distribution. The size resolution of this method scales approximately with the square of the particle radii, and by adjusting the rotor speed of the experiment size-ranges from
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two windows made from optically pure quartz glass, and a centrepiece with one or two sectors and filling holes for the sector(s), closed with a screw plug in the housing. These cell are placed into a rotor cavity with a continuous bore, with a collar at the bottom to retain the cell.
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By applying specific equipment and adapting measurement parameters several types of experiments can be performed. Most common AUC experiments are sedimentation velocity and sedimentation equilibrium experiments.
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analysis exploiting differences in each components spectroscopic signal, or by following the composition dependence of the sedimentation rates of the macromolecular system, as described in
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constants. The rotor speed is adjusted such that a steady-state concentration profile c(r) of the sample in the cell is formed, where sedimentation and diffusion cancel out each other.
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Analytical ultracentrifugation has recently seen a rise in use because of increased ease of analysis with modern computers and the development of software, including a
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Rotors for an Analytical Ultracentrifuge for a maximal spinning velocity of 50,000 (left) and 60,000 (right) rpm
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Reversible Associations in Structural and Molecular Biology (RASMB -an Analytical Ultracentrifugation Forum)
128: 190: 387:"Studying multiprotein complexes by multisignal sedimentation velocity analytical ultracentrifugation" 483: 398: 143: 48: 63:
or other assemblies from different molecule classes. The simplest measurement to be obtained is the
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The information that can be obtained from an analytical ultracentrifuge includes the gross shape of
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is an analytical technique which combines an ultracentrifuge with optical monitoring systems.
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Sedimentation equilibrium experiments reports the molar mass of analytes and their
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The experiment aims to monitor the sedimentation behavior at a fixed angular speed.
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C.M. Smales and D.C. James, Eds. Volume 308: 301-318. Humana Press Inc, Totowa, NJ.
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Balbo A, Minor KH, Velikovsky CA, Mariuzza RA, Peterson CB, Schuck P (Jan 2005).
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Analytical Ultracentrifugation as a Contemporary Biomolecular Research Tool.
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been lowered to allow access for loading or unloading the rotor.
56: 211:"Technical Manual, Spinco Ultracentrifuge Model E" 253:Modern Analytical Ultracentrifugation: Methods 233:Perez-Ramirez, B. and Steckert, J.J. (2005). 215:Science History Institute Digital Collections 8: 235:Therapeutic Proteins: Methods and Protocols. 342:Lebowitz J, Lewis MS, Schuck P (Jan 2005). 455: 420: 410: 367: 272: 329:Report on an ultracentrifuge explosion. 202: 7: 74:supported software package, SedFit. 186:Buoyant density ultracentrifugation 14: 150:Density gradient centrifugation 17:Analytical ultracentrifugation 1: 438:Cole J, Hansen J (Dec 1999). 72:National Institutes of Health 265:10.1016/j.ymeth.2010.12.005 181:Differential centrifugation 520: 51:of macromolecules such as 138:Sedimentation equilibrium 65:sedimentation coefficient 412:10.1073/pnas.0408399102 317:Gilbert-Jenkins theory 247:Ghirlando, R. (2011). 129:Gilbert-Jenkins theory 117:Sedimentation velocity 92: 28: 494:Laboratory techniques 191:Zippe-type centrifuge 90: 49:equilibrium constants 25: 489:Analytical chemistry 144:chemical equilibrium 108:Types of experiments 403:2005PNAS..102...81B 360:10.1110/ps.0207702 322:2007-05-01 at the 310:2002-08-04 at the 93: 29: 511: 469: 459: 434: 424: 414: 381: 371: 354:(9): 2067–2069. 287: 286: 276: 244: 238: 231: 225: 224: 222: 221: 207: 176:Theodor Svedberg 519: 518: 514: 513: 512: 510: 509: 508: 474: 473: 472: 437: 384: 348:Protein Science 341: 337: 335:Further reading 324:Wayback Machine 312:Wayback Machine 296: 291: 290: 246: 245: 241: 232: 228: 219: 217: 209: 208: 204: 199: 166:Ultracentrifuge 162: 157: 155:Data evaluation 152: 140: 119: 110: 105: 99: 85: 83:Instrumentation 80: 12: 11: 5: 517: 515: 507: 506: 504:Fluid dynamics 501: 496: 491: 486: 476: 475: 471: 470: 435: 382: 338: 336: 333: 332: 331: 326: 314: 302: 295: 294:External links 292: 289: 288: 259:(1): 145–156. 239: 226: 201: 200: 198: 195: 194: 193: 188: 183: 178: 173: 171:Gas centrifuge 168: 161: 158: 156: 153: 151: 148: 139: 136: 118: 115: 109: 106: 104: 101: 84: 81: 79: 76: 47:complexes and 37:macromolecules 13: 10: 9: 6: 4: 3: 2: 516: 505: 502: 500: 497: 495: 492: 490: 487: 485: 482: 481: 479: 467: 463: 458: 453: 450:(4): 163–76. 449: 445: 444:J Biomol Tech 441: 436: 432: 428: 423: 418: 413: 408: 404: 400: 396: 392: 388: 383: 379: 375: 370: 365: 361: 357: 353: 349: 345: 340: 339: 334: 330: 327: 325: 321: 318: 315: 313: 309: 306: 303: 301: 298: 297: 293: 284: 280: 275: 270: 266: 262: 258: 254: 250: 243: 240: 236: 230: 227: 216: 212: 206: 203: 196: 192: 189: 187: 184: 182: 179: 177: 174: 172: 169: 167: 164: 163: 159: 154: 149: 147: 145: 137: 135: 132: 130: 125: 116: 114: 107: 102: 100: 97: 89: 82: 77: 75: 73: 68: 66: 62: 61:nanoparticles 58: 54: 50: 46: 42: 41:stoichiometry 38: 33: 24: 20: 18: 447: 443: 397:(1): 81–86. 394: 390: 351: 347: 256: 252: 242: 234: 229: 218:. Retrieved 214: 205: 141: 133: 120: 111: 98: 94: 69: 34: 30: 16: 15: 484:Centrifuges 499:Biophysics 478:Categories 220:2018-12-18 197:References 122:100  466:19499023 431:15613487 378:12192063 320:Archived 308:Archived 283:21167941 160:See also 53:proteins 45:covalent 457:2291609 399:Bibcode 369:2373601 274:3090454 78:History 43:of non- 464:  454:  429:  422:538923 419:  376:  366:  281:  271:  103:Theory 462:PMID 427:PMID 391:PNAS 374:PMID 279:PMID 452:PMC 417:PMC 407:doi 395:102 364:PMC 356:doi 352:102 269:PMC 261:doi 57:DNA 480:: 460:. 448:10 446:. 442:. 425:. 415:. 405:. 393:. 389:. 372:. 362:. 350:. 346:. 277:. 267:. 257:58 255:. 251:. 213:. 131:. 124:Da 59:, 55:, 468:. 433:. 409:: 401:: 380:. 358:: 285:. 263:: 223:.

Index


macromolecules
stoichiometry
covalent
equilibrium constants
proteins
DNA
nanoparticles
sedimentation coefficient
National Institutes of Health

Da
Gilbert-Jenkins theory
chemical equilibrium
Ultracentrifuge
Gas centrifuge
Theodor Svedberg
Differential centrifugation
Buoyant density ultracentrifugation
Zippe-type centrifuge
"Technical Manual, Spinco Ultracentrifuge Model E"
"The analysis of macromolecular interactions by sedimentation equilibrium"
doi
10.1016/j.ymeth.2010.12.005
PMC
3090454
PMID
21167941
Reversible Associations in Structural and Molecular Biology (RASMB -an Analytical Ultracentrifugation Forum)
Analytical Ultracentrifugation as a Contemporary Biomolecular Research Tool.

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