Knowledge (XXG)

Episome

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The length of episomal retention is fairly variable between different genetic constructs and there are many known features in the sequence of an episome which will affect the length and stability of genetic expression of the carried transgene. Among these features is the number of
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The mechanism behind episomal retention in the case of S/MAR episomes is generally still uncertain. As of 1985, in the case of latent Epstein-Barr virus infection, episomes seemed to be associated with nuclear proteins of the host cell through a set of viral proteins.
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chromosomes during mitosis. Episomes do not degrade, unlike standard plasmids, and can be designed so that they are not epigenetically silenced inside the eukaryotic cell nucleus. Episomes can be observed in nature in certain types of long-term infection by
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Rawlins DR, Milman G, Hayward SD, Hayward GS (October 1985). "Sequence-specific DNA binding of the Epstein-Barr virus nuclear antigen (EBNA-1) to clustered sites in the plasmid maintenance region".
27:, which remains as a part of the eukaryotic genome without integration. Episomes manage this by replicating together with the rest of the genome and subsequently associating with 347: 140:
Conese M, Auriche C, Ascenzioni F (December 2004). "Gene therapy progress and prospects: episomally maintained self-replicating systems".
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Episomes in prokaryotes are special sequences which can divide either separate from or integrated into the prokaryotic chromosome.
374: 185:"A vector based on the SV40 origin of replication and chromosomal S/MARs replicates episomally in CHO cells" 37: 103:"Episomal vectors for gene expression in mammalian cells: Episomal vectors for eukaryotic gene expression" 33: 55:(deoxyribonucleic acid) that allow a standard plasmid to become episomally retained. One example is the 308: 165: 343: 300: 265: 214: 157: 122: 335: 292: 255: 245: 204: 196: 149: 114: 234:"pEPito: a significantly improved non-viral episomal expression vector for mammalian cells" 45: 232:
Haase R, Argyros O, Wong SP, Harbottle RP, Lipps HJ, Ogris M, et al. (March 2010).
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Van Craenenbroeck, Kathleen; Vanhoenacker, Peter; Haegeman, Guy (September 2000).
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which contribute to epigenetic silencing of the transgene carried by the episome.
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Piechaczek C, Fetzer C, Baiker A, Bode J, Lipps HJ (January 1999).
52: 326:Campbell, Allan (1974), King, Robert C. (ed.), 51:As of 1999, there were many known sequences of 334:, Boston, MA: Springer US, pp. 295–307, 332:Bacteria, Bacteriophages, and Fungi: Volume 1 8: 259: 249: 208: 93: 7: 14: 119:10.1046/j.1432-1327.2000.01645.x 107:European Journal of Biochemistry 71:Mechanism of episomal retention 1: 340:10.1007/978-1-4899-1710-2_18 297:10.1016/0092-8674(85)90282-X 391: 44:for long-term change in 251:10.1186/1472-6750-10-20 80:Episomes in prokaryotes 189:Nucleic Acids Research 34:adeno-associated virus 154:10.1038/sj.gt.3302362 23:is a special type of 201:10.1093/nar/27.2.426 38:Epstein-Barr virus 375:Molecular biology 349:978-1-4899-1710-2 238:BMC Biotechnology 148:(24): 1735–1741. 113:(18): 5665–5678. 382: 359: 358: 357: 356: 323: 317: 316: 280: 274: 273: 263: 253: 229: 223: 222: 212: 180: 174: 173: 137: 131: 130: 98: 390: 389: 385: 384: 383: 381: 380: 379: 365: 364: 363: 362: 354: 352: 350: 325: 324: 320: 282: 281: 277: 231: 230: 226: 182: 181: 177: 139: 138: 134: 100: 99: 95: 90: 82: 73: 46:gene expression 42:genetic therapy 17: 16:Type of plasmid 12: 11: 5: 388: 386: 378: 377: 367: 366: 361: 360: 348: 318: 291:(3): 859–868. 275: 224: 195:(2): 426–428. 175: 132: 92: 91: 89: 86: 81: 78: 72: 69: 15: 13: 10: 9: 6: 4: 3: 2: 387: 376: 373: 372: 370: 351: 345: 341: 337: 333: 329: 322: 319: 314: 310: 306: 302: 298: 294: 290: 286: 279: 276: 271: 267: 262: 257: 252: 247: 243: 239: 235: 228: 225: 220: 216: 211: 206: 202: 198: 194: 190: 186: 179: 176: 171: 167: 163: 159: 155: 151: 147: 143: 136: 133: 128: 124: 120: 116: 112: 108: 104: 97: 94: 87: 85: 79: 77: 70: 68: 66: 60: 58: 54: 49: 47: 43: 39: 35: 30: 26: 22: 353:, retrieved 331: 321: 288: 284: 278: 241: 237: 227: 192: 188: 178: 145: 142:Gene Therapy 141: 135: 110: 106: 96: 83: 74: 61: 50: 20: 18: 355:2022-06-25 328:"Episomes" 88:References 59:sequence. 244:(1): 20. 65:CpG sites 29:metaphase 369:Category 270:20230618 170:34565556 162:15385951 127:10971576 313:9342392 305:2996781 261:2847955 219:9862961 25:plasmid 21:episome 346:  311:  303:  268:  258:  217:  210:148196 207:  168:  160:  125:  309:S2CID 166:S2CID 57:S/MAR 344:ISBN 301:PMID 285:Cell 266:PMID 215:PMID 158:PMID 123:PMID 336:doi 293:doi 256:PMC 246:doi 205:PMC 197:doi 150:doi 115:doi 111:267 53:DNA 36:or 19:An 371:: 342:, 330:, 307:. 299:. 289:42 287:. 264:. 254:. 242:10 240:. 236:. 213:. 203:. 193:27 191:. 187:. 164:. 156:. 146:11 144:. 121:. 109:. 105:. 48:. 338:: 315:. 295:: 272:. 248:: 221:. 199:: 172:. 152:: 129:. 117::

Index

plasmid
metaphase
adeno-associated virus
Epstein-Barr virus
genetic therapy
gene expression
DNA
S/MAR
CpG sites
"Episomal vectors for gene expression in mammalian cells: Episomal vectors for eukaryotic gene expression"
doi
10.1046/j.1432-1327.2000.01645.x
PMID
10971576
doi
10.1038/sj.gt.3302362
PMID
15385951
S2CID
34565556
"A vector based on the SV40 origin of replication and chromosomal S/MARs replicates episomally in CHO cells"
doi
10.1093/nar/27.2.426
PMC
148196
PMID
9862961
"pEPito: a significantly improved non-viral episomal expression vector for mammalian cells"
doi
10.1186/1472-6750-10-20

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