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All of the data in INSDC is available for free and unrestricted access, for any purpose, with no restrictions on analysis, redistribution, or re-publication of the data. This policy has been a foundational principle of the INSDC since its inception. The official policy statement can be found at
919:
118:
synchronization is maintained according to a number of guidelines which are produced and published by an
International Advisory Board. The guidelines consist of a common definition of the feature tables for the databases, which regulate the content and
864:
828:
95:
sequences contributed by research teams to each of the three databases are synchronized on a daily basis through continuous interaction between the staff at each the collaborating organizations.
767:
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662:
103:. Since the 1990s, most of the world's major scientific journals have required that sequence data be deposited in an INSDC database as a pre-condition for publication.
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bases in the gene or decoded segment. In a DBFetch operation shows a typical INSD entry at the EMBL-EBI database; the same entry at NCBI.
244:
Brunak, Soren; Danchin, Antoine; Hattori, Masahira; Nakamura, Haruki; Shinozaki, Kazuo; Matise, Tara; Preuss, Daphne (15 November 2002).
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Karsch-Mizrachi, I.; Nakamura, Y.; Cochrane, G.; International
Nucleotide Sequence Database Collaboration (2011).
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International
Conference on Computational Intelligence Methods for Bioinformatics and Biostatistics
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Microsoft
Research - University of Trento Centre for Computational and Systems Biology
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The syntax is called INSDSeq and its core consists of the letter sequence of the
408:"Trifolium repens mRNA for non-cyanogenic beta-glucosidase - Nucleotide - NCBI"
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840:
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17:
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197:"The International Nucleotide Sequence Database Collaboration"
44:
40:
462:
829:
African
Society for Bioinformatics and Computational Biology
363:
768:
Max Planck
Institute of Molecular Cell Biology and Genetics
847:
International
Nucleotide Sequence Database Collaboration
431:
299:
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35:) consists of a joint effort to collect and disseminate
29:
International
Nucleotide Sequence Database Collaboration
1012:
946:
888:
821:
708:
686:
625:
510:
445:
47:sequences. It involves the following computerized
539:, database of protein sequences grouping together
1108:Biology organisations based in the United Kingdom
123:of the database entries, in the form of a common
774:US National Center for Biotechnology Information
859:International Society for Computational Biology
339:"The DDBJ/ENA/GenBank Feature Table Definition"
926:ISCB Africa ASBCB Conference on Bioinformatics
873:Institute of Genomics and Integrative Biology
488:
171:National Center for Biotechnology Information
8:
902:European Conference on Computational Biology
937:Research in Computational Molecular Biology
364:"European Nucleotide Archive < EMBL-EBI"
914:International Conference on Bioinformatics
495:
481:
473:
908:Intelligent Systems for Molecular Biology
220:
896:Basel Computational Biology Conference
246:"Nucleotide sequence database policies"
187:
142:sequence) and the letter sequence for
853:International Society for Biocuration
751:European Molecular Biology Laboratory
7:
1075:
879:Japanese Society for Bioinformatics
841:European Molecular Biology network
25:
931:Pacific Symposium on Biocomputing
835:Australia Bioinformatics Resource
802:Swiss Institute of Bioinformatics
785:Netherlands Bioinformatics Centre
745:European Bioinformatics Institute
1074:
1063:
1062:
733:Database Center for Life Science
721:Computational Biology Department
609:Arabidopsis Information Resource
1113:Databases in the United Kingdom
579:Specialised genomic databases:
1118:Genetics in the United Kingdom
780:Japanese Institute of Genetics
262:10.1126/science.298.5597.1333b
1:
1123:South Cambridgeshire District
700:Rosalind (education platform)
617:Zebrafish Information Network
585:Saccharomyces Genome Database
1103:Bioinformatics organizations
1030:List of biological databases
549:Protein Information Resource
458:EMBL-EBI Nucleotide Database
166:List of biological databases
91:). New and updated data on
523:European Nucleotide Archive
341:. Ebi.ac.uk. Archived from
207:(Database issue): D33–D37.
85:European Nucleotide Archive
1139:
1058:
808:Wellcome Sanger Institute
762:J. Craig Venter Institute
468:GenBank Nucleotide Search
791:Philippine Genome Center
314:"INSDC :: Advisors"
129:Document Type Definition
1035:Molecular phylogenetics
531:China National GeneBank
739:DNA Data Bank of Japan
527:DNA Data Bank of Japan
463:DNA Data Bank of Japan
201:Nucleic Acids Research
57:DNA Data Bank of Japan
1020:Computational biology
535:Secondary databases:
101:http://www.insdc.org/
517:Sequence databases:
813:Whitehead Institute
601:Rat Genome Database
453:EMBL-EBI INSDC site
382:"Database Browsing"
213:10.1093/nar/gkr1006
161:Biological database
1050:Sequence alignment
757:Flatiron Institute
410:. Ncbi.nlm.nih.gov
406:USA (2019-05-06).
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1045:Sequence database
559:Protein Data Bank
553:Other databases:
176:Sequence database
16:(Redirected from
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1025:List of biobanks
989:Stockholm format
797:Scripps Research
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446:Official website
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384:. Archived from
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316:. Archived from
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136:gene expression
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1013:Related topics
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504:Bioinformatics
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438:External links
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256:(5597): 1333.
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979:Pileup format
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822:Organizations
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575:Gene Ontology
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432:Official site
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388:on 2005-02-12
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369:
368:www.ebi.ac.uk
365:
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345:on 2005-03-24
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340:
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320:on 2007-12-09
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974:Nexus format
969:NeXML format
964:FASTQ format
959:FASTA format
947:File formats
846:
709:Institutions
412:. Retrieved
401:
390:. Retrieved
386:the original
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367:
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347:. Retrieved
343:the original
333:
322:. Retrieved
318:the original
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133:
128:
105:
97:
32:
28:
26:
954:CRAM format
875:(CSIR-IGIB)
300:"insdc.org"
39:containing
1097:Categories
1040:Sequencing
1004:GTF format
999:GFF format
994:VCF format
984:SAM format
747:(EMBL-EBI)
673:SOAP suite
593:VectorBase
555:BioNumbers
541:Swiss-Prot
414:2019-06-29
392:2005-03-02
349:2019-06-29
324:2019-06-29
182:References
144:nucleotide
140:amino acid
93:nucleotide
75:) and the
867:(ISCB-SC)
837:(EMBL-AR)
770:(MPI-CBG)
511:Databases
270:1095-9203
49:databases
37:databases
1069:Category
939:(RECOMB)
889:Meetings
843:(EMBnet)
693:Server:
668:SAMtools
663:PANGOLIN
626:Software
605:PHI-base
597:WormBase
567:InterPro
286:42740562
278:12436968
231:22080546
150:See also
112:EMBL-EBI
1081:Commons
916:(InCoB)
861:(ISCB)
849:(INSDC)
831:(ASBCB)
735:(DBCLS)
729:(COSBI)
643:Clustal
589:FlyBase
563:Ensembl
537:UniProt
519:GenBank
250:Science
222:3244996
116:GenBank
69:GenBank
922:(CIBB)
910:(ISMB)
904:(ECCB)
881:(JSBi)
787:(NBIC)
776:(NCBI)
764:(JCVI)
753:(EMBL)
741:(DDBJ)
695:ExPASy
678:TopHat
658:MUSCLE
648:EMBOSS
638:Bowtie
613:GISAID
573:, and
545:TrEMBL
284:
276:
268:
229:
219:
121:syntax
933:(PSB)
855:(ISB)
804:(SIB)
793:(PGC)
723:(CBD)
687:Other
653:HMMER
633:BLAST
282:S2CID
61:Japan
33:INSDC
18:INSDC
615:and
581:BOLD
571:KEGG
547:and
529:and
274:PMID
266:ISSN
227:PMID
108:DDBJ
106:The
89:EMBL
77:EMBL
65:NCBI
43:and
27:The
258:doi
254:298
217:PMC
209:doi
131:).
125:DTD
83:'s
81:EBI
73:USA
67:'s
63:),
55:'s
53:NIG
45:RNA
41:DNA
1099::
898:()
611:,
607:,
603:,
599:,
595:,
591:,
587:,
583:,
569:,
565:,
561:,
557:,
543:,
525:,
521:,
366:.
280:.
272:.
264:.
252:.
248:.
225:.
215:.
205:40
203:.
199:.
51::
496:e
489:t
482:v
417:.
395:.
370:.
352:.
327:.
302:.
288:.
260::
233:.
211::
138:(
127:(
114:/
110:/
87:(
79:-
71:(
59:(
31:(
20:)
Text is available under the Creative Commons Attribution-ShareAlike License. Additional terms may apply.