Knowledge (XXG)

Repeatome

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32:, segmental duplications, ribosomal DNA and other ribozymes, multi-copy gene families, pseudogenes, as well as highly conserved and repeated protein domains. Because of their relative high duplication rate as compared to other genomic components, TEs are typically predominant contributors to eukaryotic repeatomes and the product of their decay is thought to be a major source of genomic dark matter. 714: 20:
can be defined as the complement of repeated sequences in a genome. The eukaryotic repeatomes typically comprise variable amounts of multiple components including
225: 755: 178:"Tandem repeat polymorphisms: Mediators of genetic plasticity, modulators of biological diversity and dynamic sources of disease susceptibility" 411: 398: 421: 218: 119:"Deep Investigation of Arabidopsis thaliana Junk DNA Reveals a Continuum between Repetitive Elements and Genomic Dark Matter" 452: 298: 285: 748: 569: 211: 457: 25: 779: 263: 238: 203: 29: 741: 693: 621: 514: 539: 489: 21: 549: 671: 589: 666: 579: 494: 380: 242: 130: 75: 444: 315: 616: 524: 499: 343: 99: 594: 189: 158: 91: 725: 559: 509: 504: 678: 608: 534: 484: 246: 148: 138: 83: 529: 434: 554: 389: 361: 330: 325: 134: 79: 661: 519: 476: 304: 294: 153: 118: 768: 626: 366: 289: 280: 272: 46: 774: 638: 103: 143: 633: 544: 406: 645: 462: 713: 564: 177: 193: 162: 95: 721: 688: 574: 338: 234: 41: 584: 683: 87: 429: 207: 66:
Orgel, Crick (1980). "Selfish DNA: the ultimate parasite".
729: 654: 607: 475: 443: 420: 397: 388: 379: 354: 314: 271: 262: 749: 219: 8: 756: 742: 394: 385: 268: 226: 212: 204: 152: 142: 58: 7: 710: 708: 728:. You can help Knowledge (XXG) by 295:Short tandem repeat/Microsatellite 117:Maumus, Quesneville (April 2014). 14: 712: 299:Trinucleotide repeat disorders 1: 286:Variable number tandem repeat 144:10.1371/journal.pone.0094101 176:Hannan, Anthony J. (2012). 796: 707: 253: 30:simple sequence repeats 694:Protein tandem repeats 622:Tandemly arrayed genes 22:transposable elements 667:Pathogenicity island 182:Adv. Exp. Med. Biol 135:2014PLoSO...994101M 80:1980Natur.284..604O 617:Gene amplification 26:endogenous viruses 737: 736: 702: 701: 603: 602: 471: 470: 375: 374: 264:Repeated sequence 239:repeated sequence 787: 758: 751: 744: 716: 709: 679:Low copy repeats 672:Symbiosis island 609:Gene duplication 395: 386: 269: 247:gene duplication 228: 221: 214: 205: 198: 197: 173: 167: 166: 156: 146: 114: 108: 107: 88:10.1038/284604a0 63: 795: 794: 790: 789: 788: 786: 785: 784: 765: 764: 763: 762: 705: 703: 698: 650: 599: 467: 439: 416: 390:Retrotransposon 371: 362:Inverted repeat 350: 335:DNA transposon 331:Retrotransposon 326:Gene conversion 317: 310: 307: 258: 249: 232: 202: 201: 175: 174: 170: 116: 115: 111: 74:(5757): 604–7. 65: 64: 60: 55: 38: 12: 11: 5: 793: 791: 783: 782: 780:Genetics stubs 777: 767: 766: 761: 760: 753: 746: 738: 735: 734: 717: 700: 699: 697: 696: 691: 686: 681: 676: 675: 674: 669: 662:Genomic island 658: 656: 652: 651: 649: 648: 643: 642: 641: 631: 630: 629: 619: 613: 611: 605: 604: 601: 600: 598: 597: 592: 587: 582: 577: 572: 567: 562: 557: 552: 547: 542: 537: 532: 527: 522: 517: 512: 507: 502: 497: 492: 487: 481: 479: 477:DNA transposon 473: 472: 469: 468: 466: 465: 460: 455: 449: 447: 441: 440: 438: 437: 432: 426: 424: 418: 417: 415: 414: 409: 403: 401: 392: 383: 377: 376: 373: 372: 370: 369: 364: 358: 356: 352: 351: 349: 348: 347: 346: 341: 333: 328: 322: 320: 312: 311: 309: 308: 305:Macrosatellite 302: 292: 283: 277: 275: 273:Tandem repeats 266: 260: 259: 254: 251: 250: 233: 231: 230: 223: 216: 208: 200: 199: 168: 109: 57: 56: 54: 51: 50: 49: 44: 37: 34: 13: 10: 9: 6: 4: 3: 2: 792: 781: 778: 776: 773: 772: 770: 759: 754: 752: 747: 745: 740: 739: 733: 731: 727: 724:article is a 723: 718: 715: 711: 706: 695: 692: 690: 687: 685: 682: 680: 677: 673: 670: 668: 665: 664: 663: 660: 659: 657: 653: 647: 644: 640: 637: 636: 635: 632: 628: 627:Ribosomal DNA 625: 624: 623: 620: 618: 615: 614: 612: 610: 606: 596: 593: 591: 588: 586: 583: 581: 578: 576: 573: 571: 568: 566: 563: 561: 558: 556: 553: 551: 548: 546: 543: 541: 538: 536: 533: 531: 528: 526: 523: 521: 518: 516: 513: 511: 508: 506: 503: 501: 498: 496: 493: 491: 488: 486: 483: 482: 480: 478: 474: 464: 461: 459: 456: 454: 451: 450: 448: 446: 442: 436: 433: 431: 428: 427: 425: 423: 419: 413: 410: 408: 405: 404: 402: 400: 396: 393: 391: 387: 384: 382: 378: 368: 367:Direct repeat 365: 363: 360: 359: 357: 353: 345: 342: 340: 337: 336: 334: 332: 329: 327: 324: 323: 321: 319: 313: 306: 303: 300: 296: 293: 291: 290:Minisatellite 287: 284: 282: 281:Satellite DNA 279: 278: 276: 274: 270: 267: 265: 261: 257: 252: 248: 244: 240: 236: 229: 224: 222: 217: 215: 210: 209: 206: 195: 191: 187: 183: 179: 172: 169: 164: 160: 155: 150: 145: 140: 136: 132: 129:(4): e94101. 128: 124: 120: 113: 110: 105: 101: 97: 93: 89: 85: 81: 77: 73: 69: 62: 59: 52: 48: 47:Noncoding DNA 45: 43: 40: 39: 35: 33: 31: 27: 23: 19: 730:expanding it 719: 704: 639:Gene cluster 407:Alu sequence 316:Interspersed 255: 185: 181: 171: 126: 122: 112: 71: 67: 61: 17: 15: 634:Gene family 545:Tc1/mariner 500:EnSpm/CACTA 769:Categories 646:Pseudogene 463:retroposon 381:Transposon 243:transposon 53:References 24:(TEs) and 565:P element 515:Harbinger 256:Repeatome 18:repeatome 722:genetics 689:Telomere 655:See also 595:Zisupton 575:Polinton 570:PiggyBac 525:Helitron 344:Helitron 339:Polinton 235:Genetics 194:23560301 163:24709859 123:PLOS ONE 42:Junk DNA 36:See also 585:Transib 560:Novosib 540:Kolobok 510:Ginger2 505:Ginger1 490:Crypton 188:: 1–9. 154:3978025 131:Bibcode 104:4233826 96:7366731 76:Bibcode 684:CRISPR 550:Merlin 535:ISL2EU 485:Academ 318:repeat 192:  161:  151:  102:  94:  68:Nature 720:This 590:Zator 530:IS3EU 435:LINE2 430:LINE1 422:LINEs 399:SINEs 355:Other 100:S2CID 726:stub 580:Sola 555:MuDR 495:Dada 458:MER4 453:HERV 445:LTRs 190:PMID 159:PMID 92:PMID 16:The 775:DNA 520:hAT 412:MIR 186:769 149:PMC 139:doi 84:doi 72:284 771:: 245:, 241:, 237:: 184:. 180:. 157:. 147:. 137:. 125:. 121:. 98:. 90:. 82:. 70:. 28:, 757:e 750:t 743:v 732:. 301:) 297:( 288:/ 227:e 220:t 213:v 196:. 165:. 141:: 133:: 127:9 106:. 86:: 78::

Index

transposable elements
endogenous viruses
simple sequence repeats
Junk DNA
Noncoding DNA
Bibcode
1980Natur.284..604O
doi
10.1038/284604a0
PMID
7366731
S2CID
4233826
"Deep Investigation of Arabidopsis thaliana Junk DNA Reveals a Continuum between Repetitive Elements and Genomic Dark Matter"
Bibcode
2014PLoSO...994101M
doi
10.1371/journal.pone.0094101
PMC
3978025
PMID
24709859
"Tandem repeat polymorphisms: Mediators of genetic plasticity, modulators of biological diversity and dynamic sources of disease susceptibility"
PMID
23560301
v
t
e
Genetics
repeated sequence

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