Knowledge (XXG)

talk:USEP/Courses/JHU MolBio Ogg SP14/Group 82F - Knowledge (XXG)

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in mRNA processing. I don’t know a lot about either topic, and working on either article would be a great way to learn more about the RNA element or enzyme. Let me know if either article interests you or if you prefer to work on another article. I am not tied to either article and I am open to other topics. Thanks
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Hi Katherine, I drafted an outline for the article and posted it on my sandbox. Please feel free to edit/add to it. I found a couple of references and images. The images of the enzyme structure were obtained from Wiki commons. I hoping we could an image that illustrates the process. Do you know of
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Hi Katherine, after researching a couple of additional articles, I liked the following: glycine riboswitch and capping enzymes. Both cover an aspect of gene expression, which I find very interesting. Glycine riboswitch regulates the expression of downstream gene, while capping enzymes are involved
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This article is rated stub class, as it is very short and can be confusing to the average reader. The mechanism implies that translations produces four products, one of which acts as a repressor that turns off translation. The encoded protein that acts as the repressor recognizes the initiation
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Also a stub class article, very short. RNA caps are positively charged bits of nucleic acid that are attached to the 5' end of growing RNA shortly after the initiation of transcription . It has been found that the enzyme responsible for the 5' capping is comprised of two separate chains
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Hi Katherine, Do you have a preference on the article you want to work on? I saw that we both assessed the capping enzymes article. We can work on this or pick another article. What do you think of reviewing all our options articles and making a decision by Thursday?
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Hi Katherine Have you had a chance to look over the articles? We have to pick up an article by tomorrow as well as provide a small summary on why we selected it. Please let me know what you would like to work on.
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Hi Katherine, I hope you are okay with using my sandbox for this week's assignment. I transferred our references to my sandbox as it so that we can build upon them as per this week's assignment.
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Hi Katherine, I modified the summary to include additional points and to make it flow. Would you please do the final review to make sure it is okay? Please feel free to edit it.
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Hi Katherine, No problem! Thanks for claiming the article and starting the summary. It's a great start! We have to have 200-300 words so I will add to it.
64:"Translational repression of the Escherichia coli alpha operon mRNA: importance of an mRNA conformational switch and a ternary entrapment complex" 399:
Hey--I'm so sorry, I haven't received emails that you had posted here! Since we both looked at the capping enzyme article, let's do that one!
185:"mRNA capping enzyme is recruited to the transcription complex by phosphorylation of the RNA polymerase II carboxy-terminal domain" 593: 569: 555: 541: 526: 505: 490: 462: 448: 427: 408: 394: 379: 363: 340: 326: 311: 418:
Also, I went ahead and claimed Capping Enzymes, I will compose a summary and post it, feel free to go in and edit/add!
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Hi Katherine, Yes, this is our group page. I believe we have to post our assessments under the Project page.
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I know of a protein database that has 3D structures, I'll search for proteins involved!
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sequence on the RNA and binds to it, preventing further translation of the mRNA
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Awesome, I think I did it correctly :) Have you done the article assessments??
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Please review the report on the Group page and feel free to edit it. Thanks.
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I've added some additional images and description in the outline.
8: 27:Initial article assessments from Klbarnhill 517:other sites we can check for free images? 331:Yes, I posted it on the Project Page Tab. 54: 283: 279: 268: 224: 220: 209: 165: 161: 150: 102: 98: 87: 242:Shibagaki, Yoshio (August 30, 1991). 7: 477:Transfer of references to a sandbox 251:The Journal of Biological Chemistry 68:The Journal of Biological Chemistry 32:Alpha operon ribosome binding site 24: 120:Tang, Careen K (May 19, 1989). 62:Schlax, PJ (October 19, 2001). 1: 380:03:38, 27 February 2014 (UTC) 364:03:16, 26 February 2014 (UTC) 341:03:18, 26 February 2014 (UTC) 327:03:08, 26 February 2014 (UTC) 312:02:42, 26 February 2014 (UTC) 138:10.1016/0092-8674(89)90123-2 609: 594:02:50, 26 March 2014 (UTC) 570:01:07, 12 March 2014 (UTC) 556:00:58, 12 March 2014 (UTC) 542:00:30, 12 March 2014 (UTC) 527:00:10, 12 March 2014 (UTC) 506:20:45, 10 March 2014 (UTC) 491:03:31, 10 March 2014 (UTC) 463:01:55, 5 March 2014 (UTC) 449:00:02, 5 March 2014 (UTC) 428:20:54, 4 March 2014 (UTC) 409:20:48, 4 March 2014 (UTC) 395:01:48, 4 March 2014 (UTC) 18:Knowledge (XXG) talk:USEP 197:10.1101/gad.11.24.3319 183:Cho, Eun-Jung (1997). 244:"mRNA Capping Enzyme" 189:Genes and Development 512:Preliminary Outline 496:Sounds good to me! 278:Unknown parameter 219:Unknown parameter 160:Unknown parameter 97:Unknown parameter 349:Article Selection 600: 292: 291: 285: 281: 276: 274: 266: 264: 262: 257:(May): 9521–9528 248: 239: 233: 232: 226: 222: 217: 215: 207: 205: 203: 180: 174: 173: 167: 163: 158: 156: 148: 146: 144: 117: 111: 110: 104: 100: 95: 93: 85: 83: 81: 59: 608: 607: 603: 602: 601: 599: 598: 597: 582: 580:Progress report 514: 479: 351: 300: 295: 277: 267: 260: 258: 246: 241: 240: 236: 218: 208: 201: 199: 182: 181: 177: 159: 149: 142: 140: 119: 118: 114: 96: 86: 79: 77: 61: 60: 56: 52: 43: 34: 29: 22: 21: 20: 12: 11: 5: 606: 604: 581: 578: 577: 576: 575: 574: 573: 572: 560:That's great! 513: 510: 509: 508: 478: 475: 474: 473: 472: 471: 470: 469: 468: 467: 466: 465: 416: 415: 414: 413: 412: 411: 350: 347: 346: 345: 344: 343: 299: 296: 294: 293: 234: 175: 132:(4): 531–536. 112: 53: 51: 48: 42: 41:Capping Enzyme 39: 33: 30: 28: 25: 23: 15: 14: 13: 10: 9: 6: 4: 3: 2: 605: 596: 595: 591: 587: 579: 571: 567: 563: 559: 558: 557: 553: 549: 545: 544: 543: 539: 535: 531: 530: 529: 528: 524: 520: 511: 507: 503: 499: 495: 494: 493: 492: 488: 484: 476: 464: 460: 456: 452: 451: 450: 446: 442: 438: 437: 436: 435: 434: 433: 432: 431: 430: 429: 425: 421: 410: 406: 402: 398: 397: 396: 392: 388: 383: 382: 381: 377: 373: 368: 367: 366: 365: 361: 357: 348: 342: 338: 334: 330: 329: 328: 324: 320: 316: 315: 314: 313: 309: 305: 297: 289: 272: 256: 252: 245: 238: 235: 230: 213: 198: 194: 190: 186: 179: 176: 171: 154: 139: 135: 131: 127: 123: 116: 113: 108: 91: 76: 73: 69: 65: 58: 55: 49: 47: 40: 38: 31: 26: 19: 583: 515: 480: 417: 352: 301: 286:suggested) ( 271:cite journal 259:. Retrieved 254: 250: 237: 227:suggested) ( 212:cite journal 200:. Retrieved 188: 178: 168:suggested) ( 153:cite journal 141:. Retrieved 129: 125: 115: 105:suggested) ( 90:cite journal 78:. Retrieved 67: 57: 44: 35: 280:|coauthors= 261:25 February 221:|coauthors= 202:25 February 162:|coauthors= 143:25 February 99:|coauthors= 80:25 February 548:Klbarnhill 534:Klbarnhill 498:Klbarnhill 420:Klbarnhill 401:Klbarnhill 319:Klbarnhill 298:Group page 50:References 586:SabFernMB 562:SabFernMB 519:SabFernMB 483:SabFernMB 455:SabFernMB 441:SabFernMB 387:SabFernMB 372:SabFernMB 356:SabFernMB 333:SabFernMB 304:SabFernMB 282:ignored ( 223:ignored ( 164:ignored ( 101:ignored ( 284:|author= 225:|author= 166:|author= 103:|author= 75:11504736 385:Thanks. 253:. 14. 191:(11). 247:(PDF) 16:< 590:talk 566:talk 552:talk 538:talk 523:talk 502:talk 487:talk 459:talk 445:talk 424:talk 405:talk 391:talk 376:talk 360:talk 337:talk 323:talk 308:talk 288:help 263:2014 229:help 204:2014 170:help 145:2014 126:Cell 107:help 82:2014 72:PMID 255:267 193:doi 134:doi 592:) 568:) 554:) 540:) 525:) 504:) 489:) 461:) 447:) 426:) 407:) 393:) 378:) 362:) 339:) 325:) 310:) 275:: 273:}} 269:{{ 249:. 216:: 214:}} 210:{{ 187:. 157:: 155:}} 151:{{ 130:57 128:. 124:. 94:: 92:}} 88:{{ 70:. 66:. 588:( 564:( 550:( 536:( 521:( 500:( 485:( 457:( 443:( 422:( 403:( 389:( 374:( 358:( 335:( 321:( 306:( 290:) 265:. 231:) 206:. 195:: 172:) 147:. 136:: 109:) 84:.

Index

Knowledge (XXG) talk:USEP
"Translational repression of the Escherichia coli alpha operon mRNA: importance of an mRNA conformational switch and a ternary entrapment complex"
PMID
11504736
cite journal
help
"Unusual mRNA pseudoknot structure is recognized by a protein translational repressor"
doi
10.1016/0092-8674(89)90123-2
cite journal
help
"mRNA capping enzyme is recruited to the transcription complex by phosphorylation of the RNA polymerase II carboxy-terminal domain"
doi
10.1101/gad.11.24.3319
cite journal
help
"mRNA Capping Enzyme"
cite journal
help
SabFernMB
talk
02:42, 26 February 2014 (UTC)
Klbarnhill
talk
03:08, 26 February 2014 (UTC)
SabFernMB
talk
03:18, 26 February 2014 (UTC)
SabFernMB
talk

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