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Axenic

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987: 146:). These subcultures are allowed to grow until the identity of their constituent organisms can be ascertained. Selection of those cultures consisting solely of the desired organism produces the axenic culture. Subculture selection may also involve manually sampling the target organism from an uncontaminated growth front in an otherwise mixed culture, and using this as an 997: 161:
this for a fixed period of time. The agar should be an enriched medium that will support the growth of common "contaminating" organisms. Such "contaminating" organisms will grow on the plate during this period, identifying cultures that are no longer axenic.
139:, in which a culture is successively diluted to the point where subsamples of it contain only a few individual organisms, ideally only a single individual (in the case of an 170:
As axenic cultures are derived from very few organisms, or even a single individual, they are useful because the organisms present within them share a relatively narrow
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Axenic cultures are usually checked routinely to ensure that they remain axenic. One standard approach with microorganisms is to spread a sample of the culture onto an
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The axenic culture of some pathogens is complicated because they normally thrive within host tissues which exhibit properties that are difficult to replicate
693: 433: 286: 1046: 683: 610: 111:, but axenic cultures of many multicellular organisms are also possible. Axenic culture is an important tool for the study of 807: 538: 926: 254: 1051: 648: 210:. However, careful replication of key features of the host environment can resolve these difficulties (e.g. host 802: 725: 688: 484: 183: 174:. In the case of an asexual species derived from a single individual, the resulting culture should consist of 158: 92: 1031: 878: 797: 776: 426: 207: 186:
may introduce a degree of variability). Consequently, they will generally respond in a more uniform and
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A microbiological culture with only a single species or strain of organism
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of an existing mixed culture. This may involve use of a
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in which only a single species, variety, or strain of
83: 77: 71: 51: 45: 39: 912: 892: 844: 733: 724: 676: 569: 507: 493: 453: 68: 36: 302:J.B. Middlebrook; R.O. Bowman (9 September 1963). 103:organisms. The earliest axenic cultures were of 353:"Host cell-free growth of the Q fever bacterium 427: 8: 190:fashion, simplifying the interpretation of 730: 504: 434: 420: 412: 206:. This is especially true in the case of 99:is present and entirely free of all other 392: 382: 327: 265: 119:organisms in a controlled environment. 351:Omsland, Anders; et al. (2009). 7: 996: 178:organisms (though processes such as 14: 995: 986: 985: 61: 29: 684:Bacterial cellular morphologies 308:Journal of Applied Microbiology 273:Thain, M.; Hickman, M. (1994). 1: 255:Sterilization (microbiology) 150:source for the subculture. 91:) describes the state of a 1068: 927:Bacteria (classifications) 649:Primary nutritional groups 320:10.1128/am.12.1.44-45.1964 131:are typically prepared by 981: 803:Bacterial outer membrane 184:horizontal gene transfer 1047:Microbiology techniques 384:10.1073/pnas.0812074106 208:intracellular pathogens 798:Gram-negative bacteria 777:Gram-positive bacteria 653:Substrate preference 275:Dictionary of Biology 634:Microbial metabolism 218:), such as with the 884:Non-motile bacteria 480:Pathogenic bacteria 375:2009PNAS..106.4430O 127:Axenic cultures of 1052:Microbiology terms 813:Lipopolysaccharide 243:Gnotobiotic animal 1009: 1008: 908: 907: 854:Bacterial capsule 820:Periplasmic space 787:Lipoteichoic acid 672: 671: 644:Microbial ecology 639:Nitrogen fixation 369:(11): 4430–4434. 355:Coxiella burnetii 225:Coxiella burnetii 1059: 999: 998: 989: 988: 937:Former groupings 731: 582:Human microbiome 505: 436: 429: 422: 413: 407: 406: 396: 386: 348: 342: 341: 331: 299: 293: 292: 277:(9th ed.). 270: 248:Germ-free animal 216:dissolved oxygen 166:Experimental use 90: 89: 86: 85: 82: 79: 76: 73: 70: 67: 58: 57: 54: 53: 50: 47: 44: 41: 38: 35: 1067: 1066: 1062: 1061: 1060: 1058: 1057: 1056: 1012: 1011: 1010: 1005: 977: 932:Bacterial phyla 916: 904: 888: 846: 840: 831:Arabinogalactan 736: 720: 668: 565: 509: 497: 489: 475:Lysogenic cycle 456: 449: 440: 410: 350: 349: 345: 301: 300: 296: 289: 272: 271: 267: 263: 234: 200: 168: 137:dilution series 125: 107:or unicellular 64: 60: 32: 28: 17: 12: 11: 5: 1065: 1063: 1055: 1054: 1049: 1044: 1039: 1034: 1029: 1024: 1014: 1013: 1007: 1006: 1004: 1003: 993: 982: 979: 978: 976: 975: 974: 973: 968: 963: 958: 948: 943: 934: 929: 923: 921: 910: 909: 906: 905: 903: 902: 896: 894: 890: 889: 887: 886: 881: 876: 871: 866: 861: 856: 850: 848: 842: 841: 839: 838: 833: 822: 817: 816: 815: 810: 794: 789: 784: 773: 772: 771: 766: 761: 747: 741: 739: 728: 722: 721: 719: 718: 713: 708: 703: 698: 697: 696: 691: 689:cell structure 680: 678: 674: 673: 670: 669: 667: 666: 665: 664: 662:Saccharophilic 659: 651: 646: 641: 636: 631: 630: 629: 624: 619: 614: 604: 599: 594: 589: 579: 573: 571: 567: 566: 564: 563: 558: 553: 551:Microaerophile 548: 547: 546: 541: 531: 530: 529: 524: 513: 511: 502: 491: 490: 488: 487: 482: 477: 472: 467: 461: 459: 451: 450: 441: 439: 438: 431: 424: 416: 409: 408: 343: 294: 287: 281:, London, UK. 264: 262: 259: 258: 257: 252: 251: 250: 240: 233: 230: 199: 196: 167: 164: 129:microorganisms 124: 121: 15: 13: 10: 9: 6: 4: 3: 2: 1064: 1053: 1050: 1048: 1045: 1043: 1040: 1038: 1035: 1033: 1032:Biotechnology 1030: 1028: 1025: 1023: 1020: 1019: 1017: 1002: 994: 992: 984: 983: 980: 972: 969: 967: 964: 962: 959: 957: 954: 953: 952: 949: 947: 944: 942: 941:Schizomycetes 938: 935: 933: 930: 928: 925: 924: 922: 920: 915: 911: 901: 898: 897: 895: 891: 885: 882: 880: 877: 875: 872: 870: 867: 865: 862: 860: 857: 855: 852: 851: 849: 843: 837: 834: 832: 829: 827: 823: 821: 818: 814: 811: 809: 806: 805: 804: 801: 799: 795: 793: 790: 788: 785: 783: 782:Teichoic acid 780: 778: 774: 770: 767: 765: 762: 760: 757: 756: 755: 754:Peptidoglycan 751: 748: 746: 745:Cell membrane 743: 742: 740: 738: 732: 729: 727: 723: 717: 714: 712: 709: 707: 704: 702: 699: 695: 692: 690: 687: 686: 685: 682: 681: 679: 675: 663: 660: 658: 655: 654: 652: 650: 647: 645: 642: 640: 637: 635: 632: 628: 625: 623: 620: 618: 615: 612: 608: 605: 603: 600: 598: 595: 593: 590: 588: 585: 584: 583: 580: 578: 575: 574: 572: 568: 562: 559: 557: 554: 552: 549: 545: 542: 540: 537: 536: 535: 532: 528: 525: 523: 520: 519: 518: 515: 514: 512: 506: 503: 501: 496: 492: 486: 483: 481: 478: 476: 473: 471: 468: 466: 463: 462: 460: 458: 452: 448: 444: 437: 432: 430: 425: 423: 418: 417: 414: 404: 400: 395: 390: 385: 380: 376: 372: 368: 364: 363: 358: 356: 347: 344: 339: 335: 330: 325: 321: 317: 313: 309: 305: 298: 295: 290: 288:0-14-051288-8 284: 280: 279:Penguin Books 276: 269: 266: 260: 256: 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726:Structure 617:Placental 556:Nanaerobe 534:Anaerobic 465:Infection 176:identical 172:gene pool 157:, and to 117:parasitic 113:symbiotic 1022:Bacteria 991:Category 914:Taxonomy 847:envelope 737:envelope 627:Salivary 544:Obligate 522:Obligate 470:Exotoxin 447:Bacteria 403:19246385 338:14106939 232:See also 204:in vitro 198:Problems 180:mutation 159:incubate 148:inoculum 105:bacteria 97:organism 1001:Commons 900:Biofilm 879:Fimbria 864:S-layer 845:Outside 706:Bacilli 622:Uterine 607:Vaginal 517:Aerobic 500:ecology 455:Medical 394:2657411 371:Bibcode 329:1058062 238:Asepsis 220:Q fever 144:species 141:asexual 93:culture 21:biology 946:Monera 716:Spiral 508:Oxygen 401:  391:  336:  326:  285:  25:axenic 874:Pilus 828:only: 808:Porin 800:only: 779:only: 701:Cocci 677:Shape 597:Mouth 570:Other 917:and 735:Cell 602:Skin 592:Lung 498:and 399:PMID 362:PNAS 334:PMID 283:ISBN 182:and 115:and 769:DAP 764:NAG 759:NAM 587:Gut 389:PMC 379:doi 367:106 324:PMC 316:doi 19:In 1018:: 939:: 752:: 445:: 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Index

biology
/ˈzɛnɪk/
/ˈzinɪk/
culture
organism
contaminating
bacteria
eukaryotes
symbiotic
parasitic
microorganisms
subculture
dilution series
asexual
species
inoculum
agar plate
incubate
gene pool
identical
mutation
horizontal gene transfer
reproducible
experiments
intracellular pathogens
metabolites
dissolved oxygen
Q fever
Coxiella burnetii
Asepsis

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