Knowledge (XXG)

Akkermansia glycaniphila

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574:
Johansson, Malin E. V.; Ambort, Daniel; Pelaseyed, Thaher; Schütte, André; Gustafsson, Jenny K.; Ermund, Anna; Subramani, Durai B.; Holmén-Larsson, Jessica M.; Thomsson, Kristina A.; Bergström, Joakim H.; van der Post, Sjoerd; Rodriguez-Piñeiro, Ana M.; Sjövall, Henrik; Bäckström, Malin; Hansson,
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have been detected in animals with a wide variety of GI tract anatomy (foregut, hindgut, or simple) and in diet (from herbivores to omnivores and carnivores). It has been found in mammals both wild and domesticated, and in non-mammals like birds, fish and reptiles like the Burmese python. Mucin
222:, (anaerobic conditions on medium containing gastric mucin). When grown on soft agar mucin medium, colonies appear white with a diameter of 0.7mm. The long axis of single cells is 0.6–1.0 μm. Cells are covered with filaments, and occur singly, in pairs, in short chains and in aggregates. 300:
types, and the glycan types expressed, vary between these organisms, but mucus is a consistent feature of their intestinal tracts. It may be that mucus-colonizing microbes have a role in protecting the host against intestinal pathogens and contribute to restoration of the microbiota.
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The genus was named for Antoon DL Akkermans (1940–2006), a Dutch microbiologist recognized for his contribution to microbial ecology, and the epithet from the New Latin and Greek meaning "glycan-loving".
248:. For 72% (1,811) of the coding sequences, a function could be predicted. Genome analysis revealed the presence of many mucin-degrading enzymes, of which a number are predicted to be secreted: 54 770: 632:
Reid, G; Younes, JA; Van der Mei, HC; Gloor, GB; Knight, R; Busscher, HJ (January 2011). "Microbiota restoration: natural and supplemented recovery of human microbial communities".
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Ouwerkerk, Janneke P.; van der Ark, Kees C. H.; Davids, Mark; Claassens, Nico J.; Finestra, Teresa Robert; de Vos, Willem M.; Belzer, Clara; Schloss, P. D. (1 December 2016).
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Ouwerkerk, Janneke P.; Koehorst, Jasper J.; Schaap, Peter J.; Ritari, Jarmo; Paulin, Lars; Belzer, Clara; de Vos, Willem M. (5 January 2017).
265: 829: 834: 735: 788: 824: 164: 190: 697: 90: 126: 78: 66: 530: 473: 413:"Complete Genome Sequence of Strain Pyt , a Mucin-Degrading Specialist of the Reticulated Python Gut" 249: 269: 233:
Pyt is encoded on a single chromosome of 3,074,121 bp. The G+C content is 57.6% and contains 2,532
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Ouwerkerk, Janneke P.; Aalvink, Steven; Belzer, Clara; de Vos, Willem M. (1 November 2016).
226: 367:"List of Bacterial Names with Standing in Nomenclature: a folder available on the Internet" 326:
sp. nov., an anaerobic mucin-degrading bacterium isolated from reticulated python faeces"
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as its sole source of carbon and nitrogen. It is culturable under the same conditions as
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Costello, Elizabeth K; Gordon, Jeffrey I; Secor, Stephen M; Knight, Rob (3 June 2010).
494: 462:"Adaptation of Akkermansia muciniphila to the Oxic-Anoxic Interface of the Mucus Layer" 461: 437: 412: 818: 661: 257: 234: 195: 618: 720: 729: 210:-forming, oval-shaped bacterium. The typestrain is Pyt (=DSM100705=CIP 110913). 103: 592: 383: 366: 261: 428: 653: 610: 560: 503: 446: 351: 342: 321: 291:-anoxic interface of the intestinal mucin layer. This was demonstrated for 542: 392: 714: 485: 42: 749: 678: 645: 762: 744: 245: 577:"Composition and functional role of the mucus layers in the intestine" 203: 162:-degrading bacterium. It was first isolated from reticulated python ( 691: 519:"Postprandial remodeling of the gut microbiota in Burmese pythons" 215: 207: 159: 330:
International Journal of Systematic and Evolutionary Microbiology
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Muc. 16s rRNA gene amplicon sequencing reveals that the genus
704: 371:International Journal of Systematic Bacteriology 406: 404: 402: 315: 313: 8: 692: 264:. The Pyt genome is predicted to encode a 20: 600: 550: 493: 436: 382: 341: 687:- the Bacterial Diversity Metadatabase 309: 466:Applied and Environmental Microbiology 7: 581:Cellular and Molecular Life Sciences 14: 287:This bacterium probably inhabits 575:Gunnar C. (25 September 2011). 268:, indicating the potential for 266:cytochrome bd ubiquinol oxidase 1: 634:Nature Reviews. Microbiology 158:is a species of intestinal 851: 830:Bacteria described in 2016 241:genes, and three complete 593:10.1007/s00018-011-0822-3 384:10.1099/00207713-47-2-590 365:Euzéby, JP (April 1997). 132: 125: 32:Scientific classification 30: 23: 776:akkermansia-glycaniphila 736:Akkermansia glycaniphila 706:Akkermansia glycaniphila 681:Akkermansia glycaniphila 429:10.1128/genomeA.01098-16 324:Akkermansia glycaniphila 181:Biology and biochemistry 165:Malayopython reticulatus 136:Akkermansia glycaniphila 25:Akkermansia glycaniphila 275:The complete genome of 155:Akkermansia glycanphila 835:Gram-negative bacteria 343:10.1099/ijsem.0.001399 543:10.1038/ismej.2010.71 486:10.1128/AEM.01641-16 417:Genome Announcements 279:has been sequenced. 250:glycoside hydrolases 118:A. glycaniphila 16:Species of bacterium 646:10.1038/nrmicro2473 535:2010ISMEJ...4.1375C 478:2016ApEnM..82.6983O 270:aerobic respiration 91:Verrucomicrobiaceae 254:glycosyl hydrolase 79:Verrucomicrobiales 825:Verrucomicrobiota 812: 811: 797:Open Tree of Life 698:Taxon identifiers 587:(22): 3635–3641. 529:(11): 1375–1385. 472:(23): 6983–6993. 336:(11): 4614–4620. 168:) feces in 2016. 151: 150: 55:Verrucomicrobiota 842: 805: 804: 792: 791: 779: 778: 766: 765: 753: 752: 740: 739: 738: 725: 724: 723: 693: 666: 665: 629: 623: 622: 604: 571: 565: 564: 554: 523:The ISME Journal 514: 508: 507: 497: 457: 451: 450: 440: 408: 397: 396: 386: 362: 356: 355: 345: 317: 277:A. glycaniphilia 227:bacterial genome 138: 67:Verrucomicrobiae 21: 850: 849: 845: 844: 843: 841: 840: 839: 815: 814: 813: 808: 800: 795: 787: 782: 774: 769: 761: 756: 748: 743: 734: 733: 728: 719: 718: 713: 700: 679:Type strain of 675: 670: 669: 631: 630: 626: 573: 572: 568: 516: 515: 511: 459: 458: 454: 410: 409: 400: 364: 363: 359: 319: 318: 311: 306: 285: 231:A. glucaniphila 220:A. muciniphilia 214:is able to use 212:A. glycaniphila 186:A. glycaniphila 183: 174: 147: 140: 134: 121: 107: 93: 81: 69: 57: 45: 17: 12: 11: 5: 848: 846: 838: 837: 832: 827: 817: 816: 810: 809: 807: 806: 793: 780: 767: 754: 741: 726: 710: 708: 702: 701: 696: 690: 689: 674: 673:External links 671: 668: 667: 624: 566: 509: 452: 398: 357: 308: 307: 305: 302: 293:A. muciniphila 284: 281: 235:coding regions 191:A. muciniphila 182: 179: 173: 170: 149: 148: 141: 130: 129: 123: 122: 115: 113: 109: 108: 101: 99: 95: 94: 89: 87: 83: 82: 77: 75: 71: 70: 65: 63: 59: 58: 53: 51: 47: 46: 41: 39: 35: 34: 28: 27: 15: 13: 10: 9: 6: 4: 3: 2: 847: 836: 833: 831: 828: 826: 823: 822: 820: 803: 798: 794: 790: 785: 781: 777: 772: 768: 764: 759: 755: 751: 746: 742: 737: 731: 727: 722: 716: 712: 711: 709: 707: 703: 699: 694: 688: 686: 682: 677: 676: 672: 663: 659: 655: 651: 647: 643: 639: 635: 628: 625: 620: 616: 612: 608: 603: 598: 594: 590: 586: 582: 578: 570: 567: 562: 558: 553: 548: 544: 540: 536: 532: 528: 524: 520: 513: 510: 505: 501: 496: 491: 487: 483: 479: 475: 471: 467: 463: 456: 453: 448: 444: 439: 434: 430: 426: 422: 418: 414: 407: 405: 403: 399: 394: 390: 385: 380: 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112:Species: 715:Wikidata 654:21113182 619:25759012 611:21947475 602:11114784 561:20520652 504:27663027 447:28057747 352:27499019 256:, seven 188:, like, 86:Family: 50:Phylum: 43:Bacteria 38:Domain: 802:5615727 789:1679444 763:9406774 745:BacDive 552:3923499 531:Bibcode 495:5103097 474:Bibcode 438:5255907 393:9103655 283:Ecology 246:operons 98:Genus: 74:Order: 62:Class: 750:132956 683:at Bac 660:  652:  617:  609:  599:  559:  549:  502:  492:  445:  435:  391:  350:  252:, one 206:, non- 204:motile 202:, non- 146:. 2016 658:S2CID 615:S2CID 423:(1). 216:mucin 208:spore 160:mucin 144:et al 784:NCBI 771:LPSN 758:GBIF 685:Dive 650:PMID 607:PMID 557:PMID 500:PMID 443:PMID 389:PMID 348:PMID 289:oxic 243:rRNA 239:tRNA 225:The 642:doi 597:PMC 589:doi 547:PMC 539:doi 490:PMC 482:doi 433:PMC 425:doi 379:doi 338:doi 229:of 194:is 821:: 799:: 786:: 773:: 760:: 747:: 732:: 717:: 656:. 648:. 636:. 613:. 605:. 595:. 585:68 583:. 579:. 555:. 545:. 537:. 525:. 521:. 498:. 488:. 480:. 470:82 468:. 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Index

Scientific classification
Bacteria
Verrucomicrobiota
Verrucomicrobiae
Verrucomicrobiales
Verrucomicrobiaceae
Akkermansia
Binomial name
mucin
Malayopython reticulatus
A. muciniphila
Gram-negative
anaerobic
motile
spore
mucin
bacterial genome
coding regions
tRNA
rRNA
operons
glycoside hydrolases
glycosyl hydrolase
sialidases
sulfatases
cytochrome bd ubiquinol oxidase
aerobic respiration
oxic

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