114:, or in order to realize the ideas of virtual screening and drug design are also called building blocks. To be practically useful for the modular drug or drug candidate assembly, the building blocks should be either mono-functionalised or possessing selectively chemically addressable functional groups, for example, orthogonally protected. Selection criteria applied to organic functionalized molecules to be included in the building block collections for medicinal chemistry are usually based on empirical rules aimed at
134:
collections prepared for fast and reliable construction of small-molecule sets of compounds (libraries) for biological screening became one of the major strategies for pharmaceutical industry involved in drug discovery; modular, usually one-step synthesis of compounds for biological screening from building blocks turned out to be in most cases faster and more reliable than multistep, even convergent syntheses of target compounds.
20:
169:
133:
The building block approach to drug discovery changed the landscape of chemical industry which supports medicinal chemistry. Major chemical suppliers for medicinal chemistry like
Maybridge, Chembridge, Enamine adjusted their business correspondingly. By the end of the 1990th the use of building block
322:
A.J. Cairns; J.A. Perman; L. Wojtas; V.Ch. Kravtsov; M.H. Alkordi; M.Eddaoudi; M.J. Zaworotko (2008). "Supermolecular
Building Blocks (SBBs) and Crystal Design: 12-Connected Open Frameworks Based on a Molecular Cubohemioctahedron".
968:
V.S. Yarmolchuk; O.V. Shishkin; V.S. Starova; O.A. Zaporozhets; O. Kravchuk; S. Zozulya; I.V. Komarov; P.K. Mykhailiuk (2013). "Synthesis and
Characterization of β-Trifluoromethyl-Substituted Pyrrolidines".
771:
A.V. Tymtsunik; V.A. Bilenko; S.O. Kokhan; O.O. Grygorenko; D.M. Volochnyuk; I.V. Komarov (2012). "1-Alkyl-5-((di)alkylamino) Tetrazoles: Building Blocks for
Peptide Surrogates".
522:
R.Breinbauer; I. R. Vetter; H.Waldmann (2002). "From
Protein Domains to Drug Candidates—Natural Products as Guiding Principles in the Design and Synthesis of Compound Libraries".
157:
properties, therefore, the fluorine-substituted building blocks in drug design increase the probability of finding drug leads. Other examples include natural and unnatural
287:
O. K. Farha; C. D. Malliakas; M.G. Kanatzidis; J.T. Hupp (2010). "Control over
Catenation in Metal−Organic Frameworks via Rational Design of the Organic Building Block".
736:
F.W. Goldberg; J.G. Kettle; T. Kogej; M.W.D. Perry; N.P. Tomkinson (2015). "Designing novel building blocks is an overlooked strategy to improve compound quality".
393:
G. Schneider; M.-L. Lee; M. Stahl; P. Schneider (2000). "De novo design of molecular architectures by evolutionary assembly of drug-derived building blocks".
211:
L. Zang; Y. Che; J.S. Moore (2008). "One-Dimensional Self-Assembly of Planar π-Conjugated
Molecules: Adaptable Building Blocks for Organic Nanodevices".
487:
A. Kluczyk; T. Popek; T. Kiyota; P. de Macedo; P. Stefanowicz; C. Lazar; Y. Konishi (2002). "Drug
Evolution: p-Aminobenzoic Acid as a Building Block".
110:
Organic functionalized molecules (reagents), carefully selected for the use in modular synthesis of novel drug candidates, in particular, by
98:. Of special interest for this purpose are the building blocks common to known biologically active compounds, in particular, known drugs, or
1058:
O.O. Grygorenko; D.S. Radchenko; D.M. Volochnyuk; A.A. Tolmachev; I.V. Komarov (2011). "Bicyclic
Conformationally Restricted Diamines".
600:
A. Linusson; J. Gottfries; F. Lindgren; S. Wold (2000). "Statistical
Molecular Design of Building Blocks for Combinatorial Chemistry".
535:
672:"Conformationally restricted monoprotected diamines as scaffolds for design of biologically active compounds and peptidomimetics"
1021:"Conformationally rigid cyclic α-amino acids in the design of peptidomimetics, peptide models and biologically active compounds"
248:"Dendrimers and other dendritic macromolecules: From building blocks to functional assemblies in nanoscience and nanotechnology"
102:. There are algorithms for de novo design of molecular architectures by assembly of drug-derived virtual building blocks.
34:
which is used to describe a virtual molecular fragment or a real chemical compound the molecules of which possess reactive
50:
complexes. Using building blocks ensures strict control of what a final compound or a (supra)molecular construct will be.
162:
149:-containing building blocks. Introduction of the fluorine into a molecule has been shown to be beneficial for its
670:
A.N. Shivanyuk; D.M. Volochnyuk; I.V. Komarov; K.G. Nazarenko; D.S. Radchenko; A. Kostyuk; A.A. Tomachev (2007).
806:"A MARKET GROWS, BLOCK BY BLOCK. Pharmaceutical building-block business attracts firms from ACROSS THE GLOBE".
47:
876:
111:
43:
122:
replacements of the molecular fragments in drug candidates could be made using analogous building blocks.
1106:
1032:
899:
402:
259:
195:
59:
1148:
1020:
718:
582:
469:
426:
23:
Construction of complex molecular architectures is easily possible using simple building blocks
1124:
1075:
950:
915:
788:
753:
710:
652:
617:
574:
539:
504:
461:
418:
375:
340:
304:
228:
127:
95:
91:
1114:
1067:
1040:
1001:
978:
942:
907:
815:
780:
745:
702:
671:
644:
609:
566:
531:
496:
453:
410:
367:
332:
296:
267:
220:
154:
150:
35:
99:
635:
G. Schneider; H.-J. Böhm (2002). "Virtual screening and fast automated docking methods".
557:
G. Schneider; U. Fechner (2005). "Computer-based de novo design of drug-like molecules".
1110:
1036:
903:
406:
263:
145:
Typical examples of building block collections for medicinal chemistry are libraries of
94:, addressing the desire to have controllable molecular morphologies that interact with
83:
71:
19:
648:
161:
libraries, collections of conformationally constrained bifunctionalized compounds and
38:. Building blocks are used for bottom-up modular assembly of molecular architectures:
1142:
1044:
473:
430:
722:
586:
115:
39:
1005:
911:
749:
173:
119:
87:
371:
819:
414:
158:
62:, the term defines either imaginable, virtual molecular fragments or chemical
933:
M Schlosser (2006). "CF3-Bearing Aromatic and Heterocyclic Building Blocks".
500:
31:
1128:
1079:
982:
954:
946:
919:
792:
757:
714:
656:
621:
578:
543:
508:
465:
444:
J. Wang; T. Hou (2010). "Drug and Drug Candidate Building Block Analysis".
422:
379:
344:
308:
232:
168:
536:
10.1002/1521-3773(20020816)41:16<2878::AID-ANIE2878>3.0.CO;2-B
358:
R.S. Tu; M. Tirrell (2004). "Bottom-up design of biomimetic assemblies".
146:
272:
247:
63:
1071:
847:
784:
706:
613:
457:
336:
300:
224:
176:
and two building blocks BB1 and BB2 from which it could be synthesized
1119:
1094:
570:
167:
18:
693:
I. Muegge (2003). "Selection criteria for drug-like compounds".
67:
1019:
I.V. Komarov; A.O. Grigorenko; A.V. Turov; V.P. Khilya (2004).
890:
J. Drews (2000). "Drug Discovery: A Historical Perspective".
833:
861:
834:"Maybridge building blocks and reactive intermediates"
998:
Fluorine in Medicinal Chemistry and Chemical Biology
1095:"Organic chemistry: Molecular diversity by design"
197:Organic Building Blocks of the Chemical Industry
74:might be constructed or synthetically prepared.
8:
1118:
271:
118:properties of the final drug candidates.
935:Angewandte Chemie International Edition
524:Angewandte Chemie International Edition
186:
54:Building blocks for medicinal chemistry
877:"Good Suppliers – And The Other Guys"
7:
862:"Building Blocks for Drug Discovery"
106:Chemical reagents as building blocks
82:Virtual building blocks are used in
200:. New York: John Wiley & Sons.
14:
137:There are online web-resources.
46:, organic molecular constructs,
1045:10.1070/rc2004v073n08abeh000912
1:
1006:10.1002/9781444312096.fmatter
912:10.1126/science.287.5460.1960
649:10.1016/S1359-6446(01)02091-8
848:"Building Blocks: Key Facts"
750:10.1016/j.drudis.2014.09.023
676:Chimica Oggi/Chemistry Today
252:J. Polym. Sci. A Polym. Chem
165:building block collections.
1165:
875:Lowe, Derek (2010-03-18).
372:10.1016/j.addr.2003.10.047
820:10.1021/cen-v089n018.p016
395:J. Comput.-Aided Mol. Des
1025:Russian Chemical Reviews
1000:. Blackwell Publishing.
501:10.2174/0929867023368872
44:metal-organic frameworks
1093:S.L. Schreiber (2009).
415:10.1023/A:1008184403558
246:J.M.J. Fréchet (2003).
112:combinatorial chemistry
78:Virtual building blocks
983:10.1002/ejoc.201300121
947:10.1002/anie.200600449
177:
172:An anti-diabetic drug
24:
559:Nat. Rev. Drug Discov
171:
22:
738:Drug Discovery Today
637:Drug Discovery Today
360:Adv. Drug Deliv. Rev
194:H.H. Szmant (1989).
126:Building blocks and
1111:2009Natur.457..153S
1037:2004RuCRv..73..785K
904:2000Sci...287.1960D
898:(5460): 1960–1964.
814:(18): 16–18. 2011.
446:J. Chem. Inf. Model
407:2000JCAMD..14..487S
264:2003JPoSA..41.3713F
60:medicinal chemistry
273:10.1002/pola.10952
178:
163:diversity-oriented
96:biological targets
25:
1105:(7226): 153–154.
1072:10.1021/cr100352k
996:I. Ojima (2009).
977:(15): 3086–3093.
971:Eur. J. Org. Chem
941:(33): 5432–5446.
785:10.1021/jo2022235
707:10.1002/med.10041
614:10.1021/jm991118x
530:(16): 2878–2890.
495:(21): 1871–1892.
458:10.1021/ci900398f
366:(11): 1537–1563.
337:10.1021/ja078060t
301:10.1021/ja909519e
258:(23): 3713–3725.
225:10.1021/ar800030w
219:(12): 1596–1608.
128:chemical industry
92:virtual screening
36:functional groups
16:Term in chemistry
1156:
1133:
1132:
1122:
1090:
1084:
1083:
1066:(9): 5506–5568.
1055:
1049:
1048:
1016:
1010:
1009:
993:
987:
986:
965:
959:
958:
930:
924:
923:
887:
881:
880:
872:
866:
865:
858:
852:
851:
844:
838:
837:
830:
824:
823:
803:
797:
796:
779:(2): 1174–1180.
768:
762:
761:
733:
727:
726:
690:
684:
683:
667:
661:
660:
632:
626:
625:
608:(7): 1320–1328.
597:
591:
590:
554:
548:
547:
519:
513:
512:
484:
478:
477:
441:
435:
434:
390:
384:
383:
355:
349:
348:
331:(5): 1560–1561.
325:J. Am. Chem. Soc
319:
313:
312:
289:J. Am. Chem. Soc
284:
278:
277:
275:
243:
237:
236:
208:
202:
201:
191:
100:natural products
1164:
1163:
1159:
1158:
1157:
1155:
1154:
1153:
1139:
1138:
1137:
1136:
1120:10.1038/457153a
1092:
1091:
1087:
1057:
1056:
1052:
1018:
1017:
1013:
995:
994:
990:
967:
966:
962:
932:
931:
927:
889:
888:
884:
874:
873:
869:
860:
859:
855:
846:
845:
841:
832:
831:
827:
808:Chem. Eng. News
805:
804:
800:
770:
769:
765:
735:
734:
730:
692:
691:
687:
669:
668:
664:
634:
633:
629:
599:
598:
594:
571:10.1038/nrd1799
556:
555:
551:
521:
520:
516:
489:Curr. Med. Chem
486:
485:
481:
443:
442:
438:
392:
391:
387:
357:
356:
352:
321:
320:
316:
286:
285:
281:
245:
244:
240:
210:
209:
205:
193:
192:
188:
183:
155:pharmacodynamic
151:pharmacokinetic
143:
131:
108:
80:
72:drug candidates
56:
48:supra-molecular
17:
12:
11:
5:
1162:
1160:
1152:
1151:
1141:
1140:
1135:
1134:
1085:
1050:
1031:(8): 785–810.
1011:
988:
960:
925:
882:
867:
853:
839:
825:
798:
763:
728:
701:(3): 302–321.
685:
662:
627:
592:
565:(8): 649–663.
549:
514:
479:
436:
401:(5): 487–494.
385:
350:
314:
295:(3): 950–952.
279:
238:
213:Acc. Chem. Res
203:
185:
184:
182:
179:
142:
139:
130:
124:
107:
104:
84:drug discovery
79:
76:
55:
52:
40:nano-particles
28:Building block
15:
13:
10:
9:
6:
4:
3:
2:
1161:
1150:
1147:
1146:
1144:
1130:
1126:
1121:
1116:
1112:
1108:
1104:
1100:
1096:
1089:
1086:
1081:
1077:
1073:
1069:
1065:
1061:
1054:
1051:
1046:
1042:
1038:
1034:
1030:
1026:
1022:
1015:
1012:
1007:
1003:
999:
992:
989:
984:
980:
976:
972:
964:
961:
956:
952:
948:
944:
940:
936:
929:
926:
921:
917:
913:
909:
905:
901:
897:
893:
886:
883:
878:
871:
868:
863:
857:
854:
849:
843:
840:
835:
829:
826:
821:
817:
813:
809:
802:
799:
794:
790:
786:
782:
778:
774:
767:
764:
759:
755:
751:
747:
743:
739:
732:
729:
724:
720:
716:
712:
708:
704:
700:
696:
695:Med. Res. Rev
689:
686:
681:
677:
673:
666:
663:
658:
654:
650:
646:
642:
638:
631:
628:
623:
619:
615:
611:
607:
603:
596:
593:
588:
584:
580:
576:
572:
568:
564:
560:
553:
550:
545:
541:
537:
533:
529:
525:
518:
515:
510:
506:
502:
498:
494:
490:
483:
480:
475:
471:
467:
463:
459:
455:
451:
447:
440:
437:
432:
428:
424:
420:
416:
412:
408:
404:
400:
396:
389:
386:
381:
377:
373:
369:
365:
361:
354:
351:
346:
342:
338:
334:
330:
326:
318:
315:
310:
306:
302:
298:
294:
290:
283:
280:
274:
269:
265:
261:
257:
253:
249:
242:
239:
234:
230:
226:
222:
218:
214:
207:
204:
199:
198:
190:
187:
180:
175:
170:
166:
164:
160:
156:
152:
148:
140:
138:
135:
129:
125:
123:
121:
117:
113:
105:
103:
101:
97:
93:
89:
85:
77:
75:
73:
69:
65:
61:
53:
51:
49:
45:
41:
37:
33:
30:is a term in
29:
21:
1102:
1098:
1088:
1063:
1059:
1053:
1028:
1024:
1014:
997:
991:
974:
970:
963:
938:
934:
928:
895:
891:
885:
870:
856:
842:
828:
811:
807:
801:
776:
773:J. Org. Chem
772:
766:
744:(1): 11–17.
741:
737:
731:
698:
694:
688:
679:
675:
665:
643:(1): 64–70.
640:
636:
630:
605:
602:J. Med. Chem
601:
595:
562:
558:
552:
527:
523:
517:
492:
488:
482:
452:(1): 55–67.
449:
445:
439:
398:
394:
388:
363:
359:
353:
328:
324:
317:
292:
288:
282:
255:
251:
241:
216:
212:
206:
196:
189:
144:
136:
132:
120:Bioisosteric
109:
81:
57:
27:
26:
682:(3): 12–13.
174:Saxagliptin
88:drug design
66:from which
181:References
159:amino acid
1149:Chemistry
1060:Chem. Rev
116:drug-like
32:chemistry
1143:Category
1129:19129834
1080:21711015
955:16847982
920:10720314
793:22171684
758:25281855
715:12647312
657:11790605
622:10753469
579:16056391
544:12203413
509:12369873
474:24607262
466:20020714
431:12380240
423:10896320
380:15350288
345:18186639
309:20039671
233:18616298
147:fluorine
141:Examples
64:reagents
1107:Bibcode
1033:Bibcode
900:Bibcode
892:Science
723:6236984
587:2549851
403:Bibcode
260:Bibcode
1127:
1099:Nature
1078:
953:
918:
791:
756:
721:
713:
655:
620:
585:
577:
542:
507:
472:
464:
429:
421:
378:
343:
307:
231:
719:S2CID
583:S2CID
470:S2CID
427:S2CID
68:drugs
1125:PMID
1076:PMID
975:2013
951:PMID
916:PMID
789:PMID
754:PMID
711:PMID
653:PMID
618:PMID
575:PMID
540:PMID
505:PMID
462:PMID
419:PMID
376:PMID
341:PMID
305:PMID
229:PMID
153:and
90:and
86:for
1115:doi
1103:457
1068:doi
1064:111
1041:doi
1002:doi
979:doi
943:doi
908:doi
896:287
816:doi
781:doi
746:doi
703:doi
645:doi
610:doi
567:doi
532:doi
497:doi
454:doi
411:doi
368:doi
333:doi
329:130
297:doi
293:132
268:doi
221:doi
70:or
58:In
1145::
1123:.
1113:.
1101:.
1097:.
1074:.
1062:.
1039:.
1029:73
1027:.
1023:.
973:.
949:.
939:45
937:.
914:.
906:.
894:.
812:89
810:.
787:.
777:77
775:.
752:.
742:20
740:.
717:.
709:.
699:23
697:.
680:25
678:.
674:.
651:.
639:.
616:.
606:43
604:.
581:.
573:.
561:.
538:.
528:41
526:.
503:.
491:.
468:.
460:.
450:50
448:.
425:.
417:.
409:.
399:14
397:.
374:.
364:56
362:.
339:.
327:.
303:.
291:.
266:.
256:41
254:.
250:.
227:.
217:41
215:.
42:,
1131:.
1117::
1109::
1082:.
1070::
1047:.
1043::
1035::
1008:.
1004::
985:.
981::
957:.
945::
922:.
910::
902::
879:.
864:.
850:.
836:.
822:.
818::
795:.
783::
760:.
748::
725:.
705::
659:.
647::
641:7
624:.
612::
589:.
569::
563:4
546:.
534::
511:.
499::
493:9
476:.
456::
433:.
413::
405::
382:.
370::
347:.
335::
311:.
299::
276:.
270::
262::
235:.
223::
Text is available under the Creative Commons Attribution-ShareAlike License. Additional terms may apply.